<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:06:10"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E721759" ref_strand="+" ref_description="SGN-E721759 [FC15AG12]">
      <seq>ggaaaatattataatttccctcacaaaaggaataaacggatttaaaaagttggtaatagaatagaaggaggagaagcattatattgaccatttggtcggtgcttttcctccaagaaacttctccgattactctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="2958" stop="5494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3257" g_stop="3516" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="642" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5194" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="790" r_length="148" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E721759" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3257" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATATTATAATTTTACACACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCA</genome_strand>
        <mrna_strand>GGAAAATATTATAATTTCCCTCACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E722796" ref_strand="+" ref_description="SGN-E722796 [FC18BE03]">
      <seq>aatcggccgaattgagaagcattatattgaccatttggtcggtgcttttcctccaagaaacttctccgattactctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcaaaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccatccagtgctgtatggtgggcaagttatggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3027" stop="5521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3327" g_stop="3516" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="203" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="585" r_length="382" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5221" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="760" r_length="175" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E722796" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E722796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3327" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTT</genome_strand>
        <mrna_strand>GAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAAAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E253485" ref_strand="+" ref_description="SGN-E253485 [cLEG-24-G11]">
      <seq>gagaagcattatattgaccatttggtcggtgcttttcctccaagaaacttctccgattactctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcangacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3027" stop="5433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3327" g_stop="3516" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="572" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5133" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="659" r_length="87" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E253485" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3327" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCA</genome_strand>
        <mrna_strand>GAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCANGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348156" ref_strand="+" ref_description="SGN-E348156 [cTOF-27-I18]">
      <seq>ttatattgaccatttggtcggtgcttttcctccagaaacttctccgattactctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacagggagcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttnggatgttgctcgcaaagttctgaagtcagaaagtatacgtggactatatagaggattcagtctgtctgttctacatactccccatccagtgctgtatggtgggcaagttatggttcgagccagcgcttctatggagcaagctcttggataatggactgancatggtgggcctgctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3035" stop="5760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3335" g_stop="3516" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="564" r_length="383" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5243" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="760" r_length="196" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5418" g_stop="5460" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="802" r_length="42" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E348156" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3335" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5243"/>
          <exon e_start="5418" e_stop="5460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGG-GCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTT-GGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCC</genome_strand>
        <mrna_strand>TTATATTGACCATTTGGTCGGTGCTTTTCCTCCA-GAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGAGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTNGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAAGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCT-ACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTC-TATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGG-ACTGANCATGGTGGGCCTGCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E701139" ref_strand="+" ref_description="SGN-E701139 [FA15AE11]">
      <seq>ctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccatccagtgctgtatggtgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactangttgcaggtgatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3088" stop="5869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3388" g_stop="3516" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="511" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5243" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="708" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="856" r_length="148" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E701139" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3388" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG</genome_strand>
        <mrna_strand>CTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTANGTTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E461458" ref_strand="+" ref_description="SGN-E461458 [cPRO-8-D21]">
      <seq>ctttgtagactctccattttccaatttgttttgcaaaatttgctgcaaaaaaaaataacgacttgctttctttcatattagccgagctagggttttgaacagttgtatttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaacgagagtgcattttctgttgtcaggggcctagtgcgaaatgatggcattcccggtttatatagaggttttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggttgaaccgttcaaactatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatctgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaagtattcgtggactatatagaggattcagtctatctgttctaacgtactccccatccagtgctgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3110" stop="5504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3411" g_stop="3516" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="172" r_length="102" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="554" r_length="382" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5204" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="712" r_length="158" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E461458" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3411" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATG</genome_strand>
        <mrna_strand>TTTCATATTAGCCGAGCTAGGGTTTTGAACAGTTGT-A---TTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAACGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGCATTCCCGGTTTATATAGAGGTTTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTTGAACCGTTCAAACTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCTGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAAGTATTCGTGGACTATATAGAGGATTCAGTCTATCTGTTCTAACGTACTCCCCATCCAGTGCTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E300980" ref_strand="+" ref_description="SGN-E300980 [cLEW-8-H6]">
      <seq>ttccacctttgatgcaggcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgccaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3970" stop="4906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4270" g_stop="4606" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E300980" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4270" e_stop="4606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAA</genome_strand>
        <mrna_strand>TTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGCCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E265259" ref_strand="+" ref_description="SGN-E265259 [cLEI-9-K17]">
      <seq>gtttcaacaaacctttattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcattcttgcgtcttttttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="3984" stop="5491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="413" r_length="383" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="0.90"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5047" g_stop="5191" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="558" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E265259" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTC-TCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCAT</genome_strand>
        <mrna_strand>GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATTCTTGCGTCTTTTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E462660" ref_strand="+" ref_description="SGN-E462660 [cPRO-12-G22]">
      <seq>ctgcatttaagatggttgaaccgttcaaactatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatctgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtattcgtggactatatagaggattcagtctatctgttctaacatactccccatccagtgctgtatggtgggcaagttatggttcgagccagcgcttcatttggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcattgctggtgctactgcatcttgcataacaactccattggacaccattaaaactcggttgcaggtgatgggacacgacaagagacctactgcacggcaagtagttaagcagctaattgccgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgttcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcagtagggtttttatactactgacatacagtattgagagctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4247" stop="7498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4547" g_stop="4668" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5047" g_stop="5243" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="319" r_length="197" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="467" r_length="148" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="621" r_length="154" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7097" g_stop="7198" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="722" r_length="101" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E462660" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4547" e_stop="4668"/>
          <exon e_start="5047" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGG</genome_strand>
        <mrna_strand>CTGCATTTAAGATGGTTGAACCGTTCAAACTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCTGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATTCGTGGACTATATAGAGGATTCAGTCTATCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATTTGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATTGCTGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTCGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGACAAGAGACCTACTGCACGGCAAGTAGTTAAGCAGCTAATTGCCGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTTCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCAGTAGGGTTTTTATACTACTGACATACAGTA-TTGAGAGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E214710" ref_strand="+" ref_description="SGN-E214710 [cLEC-79-P1]">
      <seq>accattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4266" stop="5448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4566" g_stop="4668" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5047" g_stop="5148" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="205" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E214710" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>205</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4566" e_stop="4668"/>
          <exon e_start="5047" e_stop="5148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGA</genome_strand>
        <mrna_strand>ACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257155" ref_strand="+" ref_description="SGN-E257155 [cLEG-46-M21]">
      <seq>tcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccatccagtgctgtatggtgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtaggatttttatactactgacatacagtatttgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgactgttatatgagttgacttggaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4777" stop="7574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5077" g_stop="5243" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="315" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="469" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7097" g_stop="7274" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="647" r_length="178" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E257155" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5077" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATC</genome_strand>
        <mrna_strand>TCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392977" ref_strand="+" ref_description="SGN-E392977 [TUS-37-G5]">
      <seq>gtgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtaggatttttatactactgacatacagtatttgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgactgttatatgagttgacttggaatccaagtacctggccaaaatacaattaatttttcttagggatttcttacaatattcttaaatgatttttgccagataaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4905" stop="7653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5205" g_stop="5243" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="187" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="341" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7097" g_stop="7353" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="598" r_length="257" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E392977" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5205" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATG</genome_strand>
        <mrna_strand>GTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E376669" ref_strand="+" ref_description="SGN-E376669 [TUS-18-M14]">
      <seq>tgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtaggatttttatactactgacatacagtatttgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgactgttatatgagttgacttggaatccaagtacctggccaaaatacaattaatttttcttagggatttcttacaatattcttaaatgatttttgccagataaatgccacattcattggttgtagtgagtcatgacaaggaggacccttgaataatttttgctagataaataaatgtaaatgtaatattcattcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4906" stop="78956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5206" g_stop="5243" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="186" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="340" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7097" g_stop="7457" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="701" r_length="361" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7458" i_stop="8840" i_length="1383">
            <donor d_prob="0.000" d_score="0.82"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8841" g_stop="8860" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="721" r_length="20" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E376669" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5206" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7457"/>
          <exon e_start="8841" e_stop="8860"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGAT-AATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAAATTCTTGATCAACTTCGGTTTTCAAGCCTCTAAATTCGTTGATTTGATTTCTTTCCAAAAATTTACATCCCTCCTTTTTATATTTTGTCTGTGTCCAGAATTGCCCGATTGTACTAGGTCTGCATGTCAATCCATGTAATTTCAACTAGGAATTTACATATTTTAGTTAGTAATGCAAATAGATTGTAGTTGCCATGACATTTTATTCCATCAAAGAGGAGCATCACCTGTTTTGTTTAAGTGGACACAAGGAGTTCCATGAGCCAAAAGAATGATAACTAACAGTCTCATTAACTGATCATGAAAACTTCCCAAGTTAAACACTCTTAATTGTCTGCAGATCTTGTTACCAGTAGACCACTGGTAAAACATTTTGGACATCATGATTCTTGGGCATATTTCAATCGCTTTTAACATAGGTGCACACTTAGTTTATATTACCATCAGAAAACTGAATAGAGAATATTCAAATCAATGTAAAGGTATGCCTGCATTGCACAAATATTGGAGTTGCAAACGCCCAGCCAGCCAATTTATTCTTGAGATAATTTGATGGGCCATAAAGTTCCAAAAAACCAAAGACCAGTTACTATTTGAGTAAATTGACCAACAAAACATCAATGCTCCTACATCACATTATGAAGCAACTAGCAGGCTGTCTTTTTAGCTGAATTACATTAAAAAATGGCTTAAGAATCTATCTTACTCTATATTACACTCTCAGAACTCTTCACTAGCTAGGAAAATATGAAATGGAAAAGGAATGGAATAGTGTGTTGATCTCACTCTTAGTCCTTTACTGTAGAAGGGGAGGCAAACCAAACAGCCTGTATCAATTTTGCCCAATAAATTACTTTTCTCCAAAGCTGCCAATACAAATGAGCTAGTGTGCATCAAACTATGGACCATGAAGGGAGATCTATAAAGGGCCATATGGTTATTCTCCAAATTGTGCATCTCAAATAACTTGACCTTCATCTTCTTCATCATCATCATCTTCGTCATCATCGCGGTTTACCTTGGCATATTCCTCAAGTGATGATGCTGTATTCAGTTCACCATCTTCGTCATCATCACGGTTTACCTTAGCATATTCCTCAAGTGATGATGCTGTATTCAGTTCACCAACTTTCATGTCATCTTGACTTAGGTTTTTCTCTGAACTCTGTGACTTCCCTTTGTTCATCTGTTGCATAGACATAAGATGCACGCTAAGAATCTCAGAAACATCCTGAAAGCAACATAGTAAGGCAACAGACGCCAATGTGATGGAACTCCAGCAAAGCAAGATACTTTTATAGCACAGTAGAAATCACAAATGGTAAAGGGGAAATGAATGAGTATTTACAACCTTGGTAATACATAAAGAAGATGAGAACTTTAAAAAGAAAAAAGAAAAAAAA</genome_strand>
        <mrna_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAAATAAATGT-AAATGTAATATTCATTCAAAAAAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242888" ref_strand="+" ref_description="SGN-E242888 [cLED-31-O1]">
      <seq>tgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtaggatttttatactactgacatacagtatttgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgactgttatatgagttgacttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4906" stop="7571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5206" g_stop="5243" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="186" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="340" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7097" g_stop="7271" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="515" r_length="175" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E242888" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5206" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGA</genome_strand>
        <mrna_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231478" ref_strand="+" ref_description="SGN-E231478 [cLED-4-G22]">
      <seq>tgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaagatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="4906" stop="6607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5206" g_stop="5243" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="186" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6171" g_stop="6307" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="323" r_length="137" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E231478" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5206" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACT</genome_strand>
        <mrna_strand>TGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAAGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E376668" ref_strand="+" ref_description="SGN-E376668 [TUS-18-M14](-)">
      <seq>tttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagagtcagttcaagctgctggtgggatcattgccggtggtactgcattttgcataacaaatccattggacaccattaaaactaggttgcaggtgatgggacacgataaaagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagggtggggaacctccatgatacttgcctatgaatatttcaagcggttgtgtgcagtaaacgaatagattgatgaaagctaattgccaaacgactcttgcggtaggatttttatactactgacatacagtatttgaaagctggagataacaagaccgcgggtgattagctgtttgtatacaaatgaccctatgactgttatatgagttgacttggaatccaaggacctggccaaaaaacaattaattttttttagggattttttacaatatttttaaatgatttttgccaaataaaagccccattcattggttgtagtgagtcatgacaaggaggacccctgaataatttttggtagataataaatgttaaatgttatattccttccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="5125" stop="7758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5424" g_stop="5565" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="296" r_length="154" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7097" g_stop="7441" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="641" r_length="345" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="643" polyA_stop="678"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E376668" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5424" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTC</genome_strand>
        <mrna_strand>TTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGAGTCAGTTCAAGCTGCTGGTGGGATCATTGCCGGTGGTACTGCATTTTGCATAACAAATCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAAAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGGGTGGGGAACCTCCATGATACTTGCCTATGAATATTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAATTGCCAAACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAAAGCTGGAGATAACAAGACCGCGGGTGATTAGCTGTTTGTATACAAATGACCCTATGACTGTTATATGAGTTGACTTGGAATCCAAGGACCTGGCCAAAAAACAATTAATTTTTTTTAGGGATTTTTTACAATATTTTTAAATGATTTTTGCCAAATAAAAGCCCCATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCCTGAATAATTTTTGGTAGATAATAAATGTTAAATGTTATATTCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453365" ref_strand="-" ref_description="SGN-E453365 [cSTS-19-B16]">
      <seq>tcagttcaagctgctggtgggatcattgccggtgctactgcatcttgcataacactnccattggacaccattaaaactcggttgcaggtgatgggacacgacaagagacctactgcacggcaagtagttaagcagctaattgccgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtagggtttttatactactgacatacagtattgagagctggagataacaagactgcggctgattagctgtctgtatacaaatgacactatgacggtgttgtatgagttgacttggaatccaagtacctggccaaaatacaattaattttcttagggatttctcacaatattcttaaatgatttttgccagataaatgctacattcattggttgtagtgagtcgctacaaggaggacgaaggacgtatccttgaataatttttgccagataataaatgtaaaatgtaatattcattcatacaagaatagataaatgcttgatcaacttcatttttcaaaaaaaaaaaaaaaaaaactcgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="5179" stop="63485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5479" g_stop="5565" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="241" r_length="154" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7097" g_stop="7494" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="650" r_length="409" r_score="0.877"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7495" i_stop="7555" i_length="61">
            <donor d_prob="0.000" d_score="0.76"/>
            <acceptor a_prob="0.861" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7556" g_stop="7581" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="673" r_length="23" r_score="0.577"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E453365" ref_strand="-">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E453365" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="5479" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7494"/>
          <exon e_start="7556" e_stop="7581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGAC--TGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGA---G-T-C----ATGAC-AAGGA-GGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAAATTCTTGATCAACTTCGGTTTTCAAGCCTCTAAATTCGTTGATTTGATTTCTTTCCAAAAATTTACATCCCTCCTTTTTATATTTTGTCTGTGTCCAGAATTGCCCGATTGTACTAGGTCTGCA</genome_strand>
        <mrna_strand>TCAGTTCAAGCTGCTGGTGGGATCATTGCCGGTGCTACTGCATCTTGCATAACACTNCCATTGGACACCATTAAAACTCGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGACAAGAGACCTACTGCACGGCAAGTAGTTAAGCAGCTAATTGCCGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGGTTTTTATACTACTGACATACAGTA-TTGAGAGCTGGAGATAACAAGACTGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACGGTGTTGTATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAA-TTTTCTTAGGGATTTCTCACAATATTCTTAAATGATTTTTGCCAGATAAATGCTACATTCATTGGTTGTAGTGAGTCGCTACAAGGAGGACGAAGGACGTATCCTTGAATAATTTTTGCCAGATAATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAAATGCTTGATCAACTTCATTTTTCAAAAAAAAAAAAAA.............................................................AAAAACTCGA--G-ACTAGTTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E427325" ref_strand="-" ref_description="SGN-E427325 [STM-48-A24]">
      <seq>attaaaactcggttgcaggtgatgggacacgacaagagacctactgcaaggcaagtagttaagcagctaattgccgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtagggtttttatactactgacacagtattgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgacggtgttatatgttgacttggaatccaagtacctgnccaaaatacaattaatattcttagggatttctcacaatattcttaaatgatttttnccagataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="5865" stop="7652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="172" r_length="154" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7097" g_stop="7352" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="424" r_length="252" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E427325" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427325" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAAT</genome_strand>
        <mrna_strand>GTGATGGGACACGACAAGAGACCTACTGCAAGGCAAGTAGTTAAGCAGCTAATTGCCGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGGTTTTTATACTACTGAC--ACAGTA-TTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACGGTGTTATATGTTGACTTGGAATCCAAGTACCTGNCCAAAATACAATTAA-TATTCTTAGGGATTTCTCACAATATTCTTAAATGATTTTTNCCAGATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357925" ref_strand="+" ref_description="SGN-E357925 [cTOS-24-D16]">
      <seq>acttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcctccccttctacagtaaaggactaagagtgagatcaacacactattccattccttttccatttcatattttcctagctagtgaagagttctgagagtgtaatatagagtaagatagattcttaagccattttttaatgtaattcagctaaaaagacagcctgctagttgcttcataatgtgatgtaggagcattgatgttttgttggtcaatttactcaaatagtaactggtctttggttttttggaactttatggcccatcaaattatctcaagaataaattggctggctgggcgtttgcaactccaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="8860" stop="7660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8560" g_stop="7963" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="599" polyA_stop="619"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E357925" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8560" e_stop="7963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCCA</genome_strand>
        <mrna_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351158" ref_strand="+" ref_description="SGN-E351158 [cTOS-6-C19]">
      <seq>acttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcctccccttctacagtaaaggactaagagtgagatcaacacactattccattccttttccatttcatattttcctagctagtgaagagttctgagagtgtaatatagagtaagatagattcttaagccattttttaatgtaattcagctaaaaagacagcctgctagttgcttcataatgtgatgtangagcattgatgttttgttggtcaatttactcaaatagtaactgggtcttggttttttgggaactttatgggccatcnaattatctcaagaataaattggctggctgggcgttttgcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="8860" stop="7665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8560" g_stop="7965" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E351158" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8560" e_stop="7965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACT-GGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTC</genome_strand>
        <mrna_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTANGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGGTCTTGGTTTTTTGGGAACTTTATGGGCCATCNAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTTGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349151" ref_strand="+" ref_description="SGN-E349151 [cTOS-2-J20]">
      <seq>acttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcctccccttctacagtaaaggactaagagtgagatcaacacactattccattccttttccatttcatattttcctagctagtgaagagttctgagagtgtaatatagagtaagatagattcttaagccattttttaatgtaattcagctaaaaagacagcctgctagttgcttcataatgtgatgtaggagcattgatgttttgttggtcaatttactcaaatagtaactggtctttggttttttggaactttatggcccatcaaattatctcaagaataaattggctggctgggcgtttgcaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="8860" stop="7665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8560" g_stop="7965" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E349151" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8560" e_stop="7965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTC</genome_strand>
        <mrna_strand>ACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418816" ref_strand="-" ref_description="SGN-E418816 [STM-28-K24]">
      <seq>aaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccatgatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctcttcatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaagtaaatttatttggcacaaatgatacaggctgtttggtttacccccctttctacagtaaaggactaagagtgagatcaacacgctattccattccttttccatttcatatttgttagctagtgaagagttttgagagtgtaatctagagtaaaatagattcttaagcctaattaatgtaattcagctaaaaagacagcttgctagttgcttcataatgtgatgtaagagcattgatgttctgttggtcaatttactcatagtaattggtctttggtattttggaaaaaaaaaaaaaaaaaaaaactcgagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="10726" stop="7746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10426" g_stop="10410" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="65" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8643" g_stop="8529" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="180" r_length="115" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8438" g_stop="8023" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="595" r_length="415" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="596" polyA_stop="615"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E418816" ref_strand="-">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418816" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="10426" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8529"/>
          <exon e_start="8438" e_stop="8023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAA</genome_strand>
        <mrna_strand>AAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCATGATG..........................................................................................AAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTTGGCACAAATGATACAGGCTGTTTGGTTTACCCCCCTTTCTACAGTAAAGGACTAAGAGTGAGATCAACACGCTATTCCATTCCTTTTCCATTTCATA-TTTGTTAGCTAGTGAAGAGTTTTGAGAGTGTAATCTAGAGTAAAATAGATTCTTAAGCC--TAATTAATGTAATTCAGCTAAAAAGACAGCTTGCTAGTTGCTTCATAATGTGATGTAAGAGCATTGATGTTCTGTTGGTCAATTTACTC--ATAGTAATTGGTCTTTGGTATTTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E442919" ref_strand="-" ref_description="SGN-E442919 [cSTA-35-B5]">
      <seq>cagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccatgatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctcttcatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaagtaaatttatttggcacaaatgatacaggctgtttggtttacccccctttctacagtaaaggactaagagtgagatcaacccgctattccatcccttnnccatttcatatttgttagctagtgaagagttttgagaggtgtaatctagagtaaaatagattcttaagcctatttaatgtaattcagctaaaaagacagcttgctagttgcttcataatgtgatgtaagagcattgatgttctgttggtcaatttactcatagtaattggtctttggtattttggaaaaaaaaaaaaaaaaaaaaactcgagacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="8918" stop="7746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8618" g_stop="8529" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8438" g_stop="8023" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="506" r_length="416" r_score="0.897"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="507" polyA_stop="526"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E442919" ref_strand="-">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442919" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="8618" e_stop="8529"/>
          <exon e_start="8438" e_stop="8023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGA-GTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAA</genome_strand>
        <mrna_strand>CAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCATGATG..........................................................................................AAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTTGGCACAAATGATACAGGCTGTTTGGTTTACCCCCCTTTCTACAGTAAAGGACTAAGAGTGAGATCAACCCGCTATTCCATCCCTTNNCCATTTCATA-TTTGTTAGCTAGTGAAGAGTTTTGAGAGGTGTAATCTAGAGTAAAATAGATTCTTAAGCC--TATTTAATGTAATTCAGCTAAAAAGACAGCTTGCTAGTTGCTTCATAATGTGATGTAAGAGCATTGATGTTCTGTTGGTCAATTTACTC--ATAGTAATTGGTCTTTGGTATTTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745331" ref_strand="+" ref_description="SGN-E745331 [GI|47105747]">
      <seq>gaagagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcctccccttctacagtaaaggactaagagtgagatcaacacactattccattccttttccatttcatattttcctagctagtgaagagttctgagagtgtaatatagagtaagatagattcttaagccattttttaatgtaattcagctaaaaagacagcctgctagttgcttcataatgtgatgtaggagcattgatgttttgttggtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11762" stop="7760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11462" g_stop="11367" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="218" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="271" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="335" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="378" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="426" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8045" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="1025" r_length="599" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E745331" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1025</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11462" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTA</genome_strand>
        <mrna_strand>GAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418817" ref_strand="+" ref_description="SGN-E418817 [STM-28-K24]">
      <seq>tctttttttttttttgaagagaaaaagatgatcggcgtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccatgatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctcttcatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaagtaaatttatttggcacaaatgatacaggctgtttggtttacccccctttctacagtaaaggactaagagtgagatcaacacgctattccattccttttccatttcatatttgttagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11769" stop="7901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11477" g_stop="11367" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.901"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="233" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="286" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="350" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="393" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="441" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8529" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="556" r_length="115" r_score="0.948"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8438" g_stop="8193" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="805" r_length="249" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E418817" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11477" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8529"/>
          <exon e_start="8438" e_stop="8193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCT</genome_strand>
        <mrna_strand>TCTTTTTTTTTTTTTGAAGAGAAAAAGATGATCGGCGTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCATGATG..........................................................................................AAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTTGGCACAAATGATACAGGCTGTTTGGTTTACCCCCCTTTCTACAGTAAAGGACTAAGAGTGAGATCAACACGCTATTCCATTCCTTTTCCATTTCATA-TTTGTTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E576863" ref_strand="+" ref_description="SGN-E576863 [60148]">
      <seq>atgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcatagagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgtggaggtaagccgtgatgatgaggaggatgatgatgaagatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctctttatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaagtaaatttattcggacacaattgatataggctgtttggtttacccccctttctacagtaaagcgactaagagtgagatcaacacactattccatttcctttttccatttcatattttgttagcttacgtgaacagttttgagagtgttaatcctagagttaaagtagattcttaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11583" stop="7869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11374" g_stop="11367" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="130" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="183" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="247" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="290" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="338" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8520" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="462" r_length="124" r_score="0.935"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8519" i_stop="8454" i_length="66">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8453" g_stop="8196" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="728" r_length="266" r_score="0.872"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E576863" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11374" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8520"/>
          <exon e_start="8453" e_stop="8196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATT-GGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAG-GACTAAGAGTGAGATCAACACACTATTCCA-TTCC-TTTTCCATTTCATATTTTCCTA</genome_strand>
        <mrna_strand>ATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAGAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGTGGAGGTAAGCCGTGATGATGAGGAGG..................................................................ATGATGATGAAGATGAAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTTATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTCGGACACAATTGATATAGGCTGTTTGGTTTACCCCCCTTTCTACAGTAAAGCGACTAAGAGTGAGATCAACACACTATTCCATTTCCTTTTTCCATTTCATATTTTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E465238" ref_strand="+" ref_description="SGN-E465238 [cPRO-20-B23]">
      <seq>gaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgtggaggtaagccgtgatgatgaggaggatgatgatgaagatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctctttatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaagtaaatttattcggcacattgatataggctggttggtttaccccctttctacagtaaaggactagagtgagatcacacactattccatccttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11737" stop="7913"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11437" g_stop="11367" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="193" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="246" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="310" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="353" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="401" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8520" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="525" r_length="124" r_score="0.935"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8519" i_stop="8454" i_length="66">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8453" g_stop="8213" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="765" r_length="240" r_score="0.884"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E465238" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11437" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8520"/>
          <exon e_start="8453" e_stop="8213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTC</genome_strand>
        <mrna_strand>GAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGTGGAGGTAAGCCGTGATGATGAGGAGG..................................................................ATGATGATGAAGATGAAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTTATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTCGGC-ACATTGATATAGGCTGGTTGGTTTACC-CCCTTTCTACAGTAAAGGACT-AGAGTGAGATC-ACACACTATTCCA-TCCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E457440" ref_strand="+" ref_description="SGN-E457440 [cPRO-2-P19]">
      <seq>aaaagatgagcggcgtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgtggaggtaagccgtgatgatgaggaggatgatgatgaagatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatcccatatggccctttatagatctctctttatggtccctagtttgatgcacactagctcatttgtattgtccgctttggagaaaataaatttattcggcacattgatataggctgtttggtttaccccctttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11755" stop="7962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11455" g_stop="11367" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="211" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="264" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="328" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="371" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="419" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8520" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="543" r_length="124" r_score="0.935"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8519" i_stop="8454" i_length="66">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8453" g_stop="8262" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="736" r_length="193" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E457440" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E457440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11455" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8520"/>
          <exon e_start="8453" e_stop="8262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTC</genome_strand>
        <mrna_strand>AAAAGATGAGCGGCGTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGTGGAGGTAAGCCGTGATGATGAGGAGG..................................................................ATGATGATGAAGATGAAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTTATGGTCCCTAGTTTGATGCACACTAGCTCATTTGTATTGTCCGCTTTGGAGAAAATAAATTTATTCGGC-ACATTGATATAGGCTGTTTGGTTTACC-CCCTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698226" ref_strand="+" ref_description="SGN-E698226 [FA05CF04]">
      <seq>atcttttagaagagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11770" stop="7969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11470" g_stop="11367" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="226" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="279" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="343" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="386" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="434" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8269" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="809" r_length="375" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E698226" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11470" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCT</genome_strand>
        <mrna_strand>ATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453541" ref_strand="+" ref_description="SGN-E453541 [cSTS-20-G22]">
      <seq>gtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaattacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctcagatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccgtgatgatgatgaggatgatgatgaagatgaagatcaagttatttgagatgtgcaatttggagaataaatcccatatggccctttatagatctctcttcatggtccctagtttgagcacactagttcatttgtattgtccgctttggagaaaagtaaatttattcggcacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11741" stop="7993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11441" g_stop="11367" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="197" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="250" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="314" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="357" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="405" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8647" i_length="1617">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8646" g_stop="8526" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="526" r_length="121" r_score="0.959"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8525" i_stop="8454" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8453" g_stop="8293" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="690" r_length="164" r_score="0.870"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E453541" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11441" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8646" e_stop="8526"/>
          <exon e_start="8453" e_stop="8293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGT-AATTTATTGGGCAAAAT</genome_strand>
        <mrna_strand>GTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATTACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCGTGATGATG........................................................................ATGAGGATGATGATGAAGATGAAGATCAAGTTATTTGAGATGTGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTGA-GCACACTAGTTCATTTGTATTGTCCGCTTTGGAGAAAAGTAAATTTATTCGGCACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246557" ref_strand="+" ref_description="SGN-E246557 [cLEF-45-B17]">
      <seq>cttttagaagagaaaaagagagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11768" stop="8020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11468" g_stop="11367" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="223" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="276" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="340" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="383" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="431" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8320" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="755" r_length="324" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E246557" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11468" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTT</genome_strand>
        <mrna_strand>CTTTTAGAAGAGAAAAAGA-GAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E345274" ref_strand="+" ref_description="SGN-E345274 [cTOF-13-N11]">
      <seq>agcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctnccttcatggtccatagtttgatgcacactagctcatttgtattggcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11747" stop="8024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11447" g_stop="11367" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="203" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="256" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="320" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="363" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="411" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8324" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="731" r_length="320" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E345274" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11447" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAG</genome_strand>
        <mrna_strand>AGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTNCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E577170" ref_strand="+" ref_description="SGN-E577170 [33383]">
      <seq>aaactttttgaagagaaaaagatgaccggcgtaagaaaatgggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccatgatgaagatgaagatcaagttatttgagatgcgcaatttggagaataaatccatatggccctttatagatctctcttcatggtccctagttttgatgcaacaactactcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11772" stop="8033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11471" g_stop="11367" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="228" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="281" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="345" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="388" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="436" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8529" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="551" r_length="115" r_score="0.948"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8438" g_stop="8333" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="661" r_length="110" r_score="0.849"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E577170" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11471" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8529"/>
          <exon e_start="8438" e_stop="8333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAA-GGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA-CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAG-TTTGATGC-ACACTAGCTCATTTG</genome_strand>
        <mrna_strand>AAACTTTTTGAAGAGAAAAAGATGACCGGCGTAAGAAAATGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCATGATG..........................................................................................AAGATGAAGATCAAGTTATTTGAGATGCGCAATTTGGAGAATAAATCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTTGATGCAACAACTACTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E573026" ref_strand="+" ref_description="SGN-E573026 [32272]">
      <seq>tcggcacgagggaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattgtgaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaattttaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcgcagagttcagagaaaaacctaactcaggatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcagaggtaagccgtgatgatgaggaggatgatgatgaagatgatgatgatgatgatggtgatgaagatcaagttatttgagatgtgcaatttggagaataaatcccatatggccctttatagatctctcttcatggtccctagtctgatgcacactagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11742" stop="8038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11449" g_stop="11367" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="205" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="259" r_length="54" r_score="0.906"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="323" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="366" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="414" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8517" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="541" r_length="127" r_score="0.929"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8516" i_stop="8466" i_length="51">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8465" g_stop="8338" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="672" r_length="131" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E573026" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11449" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8517"/>
          <exon e_start="8465" e_stop="8338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTG-GAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAA-AAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTC</genome_strand>
        <mrna_strand>TCGGC-ACGAGGGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGTGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAATTTTAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCGCAGAGTTCAGAGAAAAACCTAACTCAGGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCAGAGGTAAGCCGTGATGATGAGGAGGATG...................................................ATGATGAAGATGATGATGATGATGATGGTGATGAAGATCAAGTTATTTGAGATGTGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATGGTCCCTAGTCTGATGCACACTAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E605334" ref_strand="+" ref_description="SGN-E605334 [21251]">
      <seq>ggcgtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccatgatgaagatgaagatcaaggttatttgagatgcgcaatttggagaataaatcccatatggncctttatagatctctcttcatggtccctagtttgatgcacactagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11744" stop="8039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11444" g_stop="11367" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="200" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="253" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="317" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="360" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="408" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.092" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8529" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="523" r_length="115" r_score="0.948"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8438" g_stop="8339" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="627" r_length="104" r_score="0.870"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E605334" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11444" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8529"/>
          <exon e_start="8438" e_stop="8339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAA-GTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCT</genome_strand>
        <mrna_strand>GGCGTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCATGATG..........................................................................................AAGATGAAGATCAAGGTTATTTGAGATGCGCAATTTGGAGAATAAATCCCATATGGNCCTTTATAGATCTCTCTTCATGGTCCCTAGTTTGATGCACACTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E424938" ref_strand="+" ref_description="SGN-E424938 [STM-44-G6]">
      <seq>gtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaattacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgtgctcagatgaacaaagggaagtcacagagttcagagaaaaacctaactcaagatgacatgaaggttggtgaactgaatacagcatcatcacttgaggaatatgcggaggtaagccgtgatgatgatgaggatgatgatgaagatgaagatcaagttatttgagatgtgcaatttggagaataaatcccatatggccctttatagatctctcttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11741" stop="8064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11441" g_stop="11367" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="197" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="250" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="314" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="357" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="405" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8647" i_length="1617">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8646" g_stop="8526" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="526" r_length="121" r_score="0.959"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="8525" i_stop="8454" i_length="72">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8453" g_stop="8364" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="619" r_length="93" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E424938" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E424938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11441" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8646" e_stop="8526"/>
          <exon e_start="8453" e_stop="8364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAAT-AA--CCATATGGCCCTTTATAGATCTCCCTTCATG</genome_strand>
        <mrna_strand>GTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATTACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAACTCAAGATGACATGAAGGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCGGAGGTAAGCCGTGATGATG........................................................................ATGAGGATGATGATGAAGATGAAGATCAAGTTATTTGAGATGTGCAATTTGGAGAATAAATCCCATATGGCCCTTTATAGATCTCTCTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E273835" ref_strand="+" ref_description="SGN-E273835 [cLEN-7-E13]">
      <seq>tgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11243" stop="8065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11169" g_stop="11161" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="62" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="126" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="169" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="217" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8643" g_stop="8365" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="496" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E273835" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11169" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCAT</genome_strand>
        <mrna_strand>TGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246017" ref_strand="+" ref_description="SGN-E246017 [cLEF-54-A4]">
      <seq>aaaatcttttagaagagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11773" stop="8192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11473" g_stop="11367" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="229" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="282" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="346" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="389" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="437" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8492" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="589" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E246017" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11473" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACT</genome_strand>
        <mrna_strand>AAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312846" ref_strand="+" ref_description="SGN-E312846 [cTOA-8-C24]">
      <seq>aaaaatcttttagaatagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaagcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11774" stop="8263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11474" g_stop="11367" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="230" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="283" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="347" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="390" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="438" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8563" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="519" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E312846" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11474" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCA</genome_strand>
        <mrna_strand>AAAAATCTTTTAGAATAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAAGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E283361" ref_strand="+" ref_description="SGN-E283361 [cLER-12-M11]">
      <seq>aaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaagcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11756" stop="8285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11456" g_stop="11367" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="212" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="265" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="329" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="372" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="420" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="8585" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="479" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E283361" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11456" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="8585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGT</genome_strand>
        <mrna_strand>AAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAAGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E336587" ref_strand="+" ref_description="SGN-E336587 [cTOE-4-G24]">
      <seq>ttttagaagagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaannnnacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcctgttggtcaagtggttggaagagatgtttcacaagtagaggctgagaaaaaagctcttgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11767" stop="10112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11467" g_stop="11367" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="223" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="276" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="340" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10412" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="381" r_length="41" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E336587" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11467" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGG</genome_strand>
        <mrna_strand>TTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAANNNNACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCCTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCACAAGTAGAGGCTGAGAAAAAAGCTCTTGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E400777" ref_strand="+" ref_description="SGN-E400777 [PPC-2-I9]">
      <seq>tttttgaagagaaaaagatgagcggcgtaagaaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaattacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtggtcgaaaagaaacgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11767" stop="10609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11467" g_stop="11367" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="223" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10909" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="249" r_length="26" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E400777" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>249</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E400777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11467" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGC</genome_strand>
        <mrna_strand>TTTTTGAAGAGAAAAAGATGAGCGGCGTAAGAAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATTACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGGTCGAAAAGAAACGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E250290" ref_strand="+" ref_description="SGN-E250290 [cLEG-6-C18]">
      <seq>ccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggttcaaatgaagttggagaaaaatacancaagggccccgtgcttcatccatgaccacaactagtgatgacaaattgaagagtgaaaccattttctctgagattttgaatccatcgggacgatgagattgttacaactagtatgataaatattacatattagttcttctctgtttcctttttcgtctgttgaatttatgtccttattatatgtggatgatgaactgaagccattattcagaagtatataagctataaaatactttcattatttttnaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15233" stop="14024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14933" g_stop="14324" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="615" r_length="615" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14323" i_stop="14229" i_length="95">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.629" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14228" g_stop="14217" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="627" r_length="12" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E250290" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14933" e_stop="14324"/>
          <exon e_start="14228" e_stop="14217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACA-CAA--G--CAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTGAACTTTGCTTCCTCTTTTTGTTTGTTTTGAATCTTTTGCTTTTTTATTTCCCATTTGATATCTCGTATCTATACTAAAACTCATTAGGAAGAAAACGAA</genome_strand>
        <mrna_strand>CCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACANCAAGGGCCCCGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATTTTTN...............................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257061" ref_strand="-" ref_description="SGN-E257061 [cLEG-44-D7]">
      <seq>gtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccgttgattatgaatgatcataccaatatatctacagatgaaggattggaggaattttcaggttcaaatgaagttggagaaaaatacacaagcagtgcttcatccatgaccacaactagtgatgtcaaattgaagagtgaaaccattttctctgagattttgaatccatcggggcgatgagattgttacaactagtatgataaatatgacacattagttcttctgtgtttcctttttggtctgttgaattcatgtccttattatatgtggatgatgaactgaagccattattcagaagtatataagccctaaaattctttcattacattttgttgagtaaagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15190" stop="14014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14890" g_stop="14314" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14313" i_stop="14229" i_length="85">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.629" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14228" g_stop="14217" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="589" r_length="12" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E257061" ref_strand="-">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257061" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14890" e_stop="14314"/>
          <exon e_start="14228" e_stop="14217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTGAACTTTGCTTCCTCTTTTTGTTTGTTTTGAATCTTTTGCTTTTTTATTTCCCATTTGATATCTCGTATCTATACTAAAACTCATTAGGAAGAAAACGAA</genome_strand>
        <mrna_strand>GTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCGTTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTGGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGTCAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGGCGATGAGATTGTTACAACTAGTATGATAAATATGACACATTAGTTCTTCTGTGTTTCCTTTTTGGTCTGTTGAATTCATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCCCTAAAATTCTTTCATTACATTTTGTTGAGTAAA.....................................................................................GAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421964" ref_strand="+" ref_description="SGN-E421964 [STM-33-J10]">
      <seq>caacntctattggtgaaactattttatagcaaatctacttctgaataatggcttcaattcatctacatatataataaggacataaatttaacaaaggaaaaagaaaacagagaagaactaatatgtaatttatcatactagttgtaacaatctcatcgacccgatggattcaaaatctcagagaaaatagtgtcactcttcaatttgtcatcactattactggtcatggatgtagcactgcttgtgtattttcctccaacttcatgtgaacctgaaaatgcctcgaatccttcatctgtagatatattggtatgatcattcataatcaaggggaaagacgggctagtcggataactgttcaattccattttgtgacctctattatcagctgcatcttgaagctttaatataaattccaaattccagacaacgtcattcattgatggcctttggactccttgatccttcaagcaattatatgctgcttctgcaaacttgtttaagcactctggcgcaatttgtccttccaaattcggatcaattatttgttgaagatttccttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="14028" stop="15187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14320" g_stop="14887" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E421964" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14320" e_stop="14887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAAAATATAATGAAAGTATTTTATAGCTTATATACTTCTGAATAATGGCTTCAGTTCATCATCCACATATAATAAGGACATAAATTCAACAGACGAAAAAGGAAACAGAGAAGAACTAATATGTAATATTTATCATACTAGTTGTAACAATCTCATCGTCCCGATGGATTCAAAATCTCAGAGAAAATGGTTTCACTCTTCAATTTGTCATCACTAGTTGTGGTCATGGATGAAGCACTGCTTGTGTATTTTTCTCCAACTTCATTTGAACCTGAAAATTCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAATGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCTTCTTGAAGCTTTAATATAAATTCCAAATTCCAAACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTGTATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCGATTTGTCCTTCCAAATTTGGATCAATTATTTGTTGAAGATTTCCTTTTT</genome_strand>
        <mrna_strand>CAACNTCTATTGGTGAAACTATTTTATAGCAAATCTACTTCTGAATAATGGCTTCAATTCATC-TACATATATAATAAGGACATAAATTTAACAAAGGAAAAAGAAAACAGAGAAGAACTAATATGT-A-ATTTATCATACTAGTTGTAACAATCTCATCGACCCGATGGATTCAAAATCTCAGAGAAAATAGTGTCACTCTTCAATTTGTCATCACTATTACTGGTCATGGATGTAGCACTGCTTGTGTATTTTCCTCCAACTTCATGTGAACCTGAAAATGCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAAGGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCATCTTGAAGCTTTAATATAAATTCCAAATTCCAGACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTATATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCAATTTGTCCTTCCAAATTCGGATCAATTATTTGTTGAAGATTTCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E394846" ref_strand="+" ref_description="SGN-E394846 [TUS-43-A9](-)">
      <seq>gggtagtgctattcgaagtgttgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggttcaaatgaagttggagaaaaatacacaagcagtgcttcatccatgaccacaactagtgatgacaaattgaagagtgaaaccattttctctgagattttgaatccatcgggacgatgagattgttacaactagtatgataaatattacatattagttcttctctgtttcctttttcgtctgttgaatttatgtccttattatatgtggatgatgaactgaagccattattcagaagtatataagctataaaatactttcattataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15286" stop="14028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14986" g_stop="14329" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="659" polyA_stop="673"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E394846" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14986" e_stop="14329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTAT</genome_strand>
        <mrna_strand>GGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E398662" ref_strand="+" ref_description="SGN-E398662 [TUS-44-B10](-)">
      <seq>taaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgaatagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggttcaaatgaagttggagaaaaatacacaagcagtgcttcatccatgaccacaactagtgatgacaaattgaagagtgaaaccattttctatgagattttgaatccatcgggacgatgagattgttacaaatagtatgataaatattacatattagttcttctcggtttcctttttcgtctgttgaatttatgtcctttttatatgtggatgacgaactgaagccattattcagaagtatgtaagctataaattactttcattataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15189" stop="14028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14889" g_stop="14329" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="562" polyA_stop="576"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E398662" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E398662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14889" e_stop="14329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTAT</genome_strand>
        <mrna_strand>TAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGAATAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTATGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAAATAGTATGATAAATATTACATATTAGTTCTTCTCGGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTTTTATATGTGGATGACGAACTGAAGCCATTATTCAGAAGTATGTAAGCTATAAATTACTTTCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200355" ref_strand="+" ref_description="SGN-E200355 [cLEC-1-M19](-)">
      <seq>atttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggttcaaatgaagttggagaaaaatacacaagcagtgcttcatccatgaccacaactagtgatgacaaattgaagagtgaaaccattttctctgagattttgaatccatcgggacgatgagattgttacaactagtatgataaatattacatattagttcttctctgtttcctttttcgtctgttgaatttatgtccttattatatgtggatgatgaactgaagccattattcagaagtaaataagctataaaatactttcattataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15036" stop="14028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14736" g_stop="14329" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="409" polyA_stop="422"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E200355" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14736" e_stop="14329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTAT</genome_strand>
        <mrna_strand>ATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTAAATAAGCTATAAAATACTTTCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E410103" ref_strand="+" ref_description="SGN-E410103 [PPI-16-E17]">
      <seq>ctttggatatctagatcctgaatactataagcgacaacaattgacagaaaaatctgatgtgtattcttttggggtggtgctattcgaagtgttgtgcgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccgaatttggaagggcaaattgcgccagagtgcttaaacaagtttgcagaagcagcatataattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtctggaatttggaatttatattaaagcttcaagatgcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttccccttgattatgaatgataataccaatatatctacagatgaaggattcgaggcattttcaggttcacatgaagttggaggaaaatacacaagcagtgctacatccatgaccagtaatagcgatgacaaattgaagagtgacactattttctcagagattttgaatccatcgggtcgatgagattgttacaactagtatgataaattacatattagttcttctctgttttttttttcctttgttgaatttatgtccttattatatatgtagatgaattgaagccattattcagaagtatataagctantaaatagtttcactaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15357" stop="14028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15057" g_stop="14334" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="725" polyA_stop="737"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E410103" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E410103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15057" e_stop="14334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTC</genome_strand>
        <mrna_strand>CTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAATTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTGGTGCTATTCGAAGTGTTGTGCGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCGAATTTGGAAGGGCAAATTGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATATAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTCTGGAATTTGGAATTTATATTAAAGCTTCAAGATGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCCTTGATTATGAATGATAATACCAATATATCTACAGATGAAGGATTCGAGGCATTTTCAGGTTCACATGAAGTTGGAGGAAAATACACAAGCAGTGCTACATCCATGACCAGTAATAGCGATGACAAATTGAAGAGTGACACTATTTTCTCAGAGATTTTGAATCCATCGGGTCGATGAGATTGTTACAACTAGTATGAT-AA-ATTACATATTAGTTCTTCTCTGTTTTTTTTTTCCTTTGTTGAATTTATGTCCTTATTATATATGTA-GATGAATTGAAGCCATTATTCAGAAGTATATAAGCTANTAAATAGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434507" ref_strand="-" ref_description="SGN-E434507 [STM-60-E1]">
      <seq>tttcaggttcacatgaagttggaggaaaatacccaagcagtgctacatccatgcccagtaatagcgatgacaaattgaagagtgacactattttctcagagattttgaatccatcgggtcgatgagattgttacaactagtatgataaattacatattagttcttctctgttttttttttcctttgttgaatttatgtccttattatatatgtagatgaattgaagccattattcagaagtatataagctataaaatagtttccctaaaaaaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="14841" stop="14028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14599" g_stop="14334" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="267" polyA_stop="290"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E434507" ref_strand="-">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>266</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434507" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14599" e_stop="14334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTC</genome_strand>
        <mrna_strand>TTTCAGGTTCACATGAAGTTGGAGGAAAATACCCAAGCAGTGCTACATCCATGCCCAGTAATAGCGATGACAAATTGAAGAGTGACACTATTTTCTCAGAGATTTTGAATCCATCGGGTCGATGAGATTGTTACAACTAGTATGAT-AA-ATTACATATTAGTTCTTCTCTGTTTTTTTTTTCCTTTGTTGAATTTATGTCCTTATTATATATGTA-GATGAATTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATAGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E426893" ref_strand="+" ref_description="SGN-E426893 [STM-47-I18]">
      <seq>aaaatcttttttagtgaaactattttatagcttttatacttctgaataatggcttcaattcatctacatatataataaggacataaattcaacaaaggaaaaagaaaacagagaagaactaatatgtaatttatcatactagttgtaacaatctcatcgacccgatggattcaaaatctcagagaaaatagtgtcactcttcaatttgtcatcactattactggtcatggatgtagcactgcttgtgtattttcctccaacttcatgtgaacctgaaaatgcctcgaatccttcatctgtagatatattggtatgatcattcataatcaaggggaaagacgggctagtcggataactgttcaattccattttgtgacctctattatcagctgcatcttgaagctttaatataaattccaaattccagacaacgtcattcattgatggcctttggactccttgatccttcaagcaattatatgctgcttctgcaaacttgtttaagcactctggcgcaatttgtccttccaaattcggatcaattatttgttgaagatttccttttttacagctcctacaagcccaatcagccaaattcacttgccctttcggcatgttaggaattaatgctggtctagcgcacaacacttcgaatagcaccaccccaaaagaatacacatcagatttttctgtcaattgttgtcgcttatagtattcaggatctagatatccaaagcttcctttcacaacagtgctaacatgggtttttcctgatccactaagtggaccgattttggataaccaaaatctgaaacttagcaacccattatcatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="14028" stop="15460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14339" g_stop="15160" g_length="822"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="836" r_length="816" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E426893" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426893" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14339" e_stop="15160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTATAGCTTATATACTTCTGAATAATGGCTTCAGTTCATCATCCACATATAATAAGGACATAAATTCAACAGACGAAAAAGGAAACAGAGAAGAACTAATATGTAATATTTATCATACTAGTTGTAACAATCTCATCGTCCCGATGGATTCAAAATCTCAGAGAAAATGGTTTCACTCTTCAATTTGTCATCACTAGTTGTGGTCATGGATGAAGCACTGCTTGTGTATTTTTCTCCAACTTCATTTGAACCTGAAAATTCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAATGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCTTCTTGAAGCTTTAATATAAATTCCAAATTCCAAACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTGTATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCGATTTGTCCTTCCAAATTTGGATCAATTATTTGTTGAAGATTTCCTTTTTTACAGCTCCTACAAGCCCAATCAGCCAAATTCACTTGCCCTTTCGGCATGTTAGGAATTAATGCTGGTCTAGCACACAACACTTCGAATAGCACTACCCCAAAAGAATACACATCAGATTTTTCTGTCAACTGTTGTCGCTTATAGTATTCAGGATCTAGATATCCAAAGCTTCCTTTCACAACAGTGCTAACATGAGTTTTTCCTGATCCACTAAGTGGACCGATTTTGGATAACCCAAAATCTGAAACCTTAGCAACCCATTTATCATCCA</genome_strand>
        <mrna_strand>TATTTTATAGCTTTTATACTTCTGAATAATGGCTTCAATTCATC-TACATATATAATAAGGACATAAATTCAACAAAGGAAAAAGAAAACAGAGAAGAACTAATATGT-A-ATTTATCATACTAGTTGTAACAATCTCATCGACCCGATGGATTCAAAATCTCAGAGAAAATAGTGTCACTCTTCAATTTGTCATCACTATTACTGGTCATGGATGTAGCACTGCTTGTGTATTTTCCTCCAACTTCATGTGAACCTGAAAATGCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAAGGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCATCTTGAAGCTTTAATATAAATTCCAAATTCCAGACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTATATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCAATTTGTCCTTCCAAATTCGGATCAATTATTTGTTGAAGATTTCCTTTTTTACAGCTCCTACAAGCCCAATCAGCCAAATTCACTTGCCCTTTCGGCATGTTAGGAATTAATGCTGGTCTAGCGCACAACACTTCGAATAGCACCACCCCAAAAGAATACACATCAGATTTTTCTGTCAATTGTTGTCGCTTATAGTATTCAGGATCTAGATATCCAAAGCTTCCTTTCACAACAGTGCTAACATGGGTTTTTCCTGATCCACTAAGTGGACCGATTTTGGATAA-CCAAAATCTGAAA-CTTAGCAACCCA-TTATCATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421980" ref_strand="+" ref_description="SGN-E421980 [STM-33-L6]">
      <seq>catctacatatataataaggacataaattcaacaaaggaaaaaaaaaaacagataagaactaatatgtaatttatcatactagttgtaacaatctcatcgacccgatggattcaaaatctctgagaaaatagtgtcactcttcaatttgtcatcgctattactggtcatggatgtagcactgcttgtgtattttcctccaacttcatgtgaacctgaaaatgcctcgaatccttcatctgtagatatattggtattatcattcataatcaaggggaaagacgggctagtcggataactgttcaattccattttgtgacctctattatcagctgcatcttgaagctttaatataaattccaaattccagacaacgtcattcattgatggcctttggactccttgatccttcaagcaattatatgctgcttctgcaaacttgtttaagcactctggcgcaatttgcccttccaaattcggatcaattatttgttgaagatttccttttttacagctcctacaagcccaatcagccaaattcacttgccctttcggcatgttaggaattaatgctggtctagcgcacaacacttcgaatagcaccaccccaaaagaatacacatcagatttttctgtcaattgttgtcgcttatagtattcaggatctagatatccaaagcttcctttcacacagtgctaacatgggttttcctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="14079" stop="15396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14379" g_stop="15096" g_length="718"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E421980" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14379" e_stop="15096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCATCCACATATAATAAGGACATAAATTCAACAGACG-AAAAAGGAAACAGAGAAGAACTAATATGTAATATTTATCATACTAGTTGTAACAATCTCATCGTCCCGATGGATTCAAAATCTCAGAGAAAATGGTTTCACTCTTCAATTTGTCATCACTAGTTGTGGTCATGGATGAAGCACTGCTTGTGTATTTTTCTCCAACTTCATTTGAACCTGAAAATTCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAATGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCTTCTTGAAGCTTTAATATAAATTCCAAATTCCAAACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTGTATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCGATTTGTCCTTCCAAATTTGGATCAATTATTTGTTGAAGATTTCCTTTTTTACAGCTCCTACAAGCCCAATCAGCCAAATTCACTTGCCCTTTCGGCATGTTAGGAATTAATGCTGGTCTAGCACACAACACTTCGAATAGCACTACCCCAAAAGAATACACATCAGATTTTTCTGTCAACTGTTGTCGCTTATAGTATTCAGGATCTAGATATCCAAAGCTTCCTTTCACAACAGTGCTAACATGAGTTTTTCCTGAT</genome_strand>
        <mrna_strand>CATC-TACATATATAATAAGGACATAAATTCAACAAAGGAAAAAAAAAAACAGATAAGAACTAATATGT-A-ATTTATCATACTAGTTGTAACAATCTCATCGACCCGATGGATTCAAAATCTCTGAGAAAATAGTGTCACTCTTCAATTTGTCATCGCTATTACTGGTCATGGATGTAGCACTGCTTGTGTATTTTCCTCCAACTTCATGTGAACCTGAAAATGCCTCGAATCCTTCATCTGTAGATATATTGGTATTATCATTCATAATCAAGGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCATCTTGAAGCTTTAATATAAATTCCAAATTCCAGACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTATATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCAATTTGCCCTTCCAAATTCGGATCAATTATTTGTTGAAGATTTCCTTTTTTACAGCTCCTACAAGCCCAATCAGCCAAATTCACTTGCCCTTTCGGCATGTTAGGAATTAATGCTGGTCTAGCGCACAACACTTCGAATAGCACCACCCCAAAAGAATACACATCAGATTTTTCTGTCAATTGTTGTCGCTTATAGTATTCAGGATCTAGATATCCAAAGCTTCCTTTCAC-ACAGTGCTAACATG-GGTTTTCCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434506" ref_strand="+" ref_description="SGN-E434506 [STM-60-E1]">
      <seq>ctttggatatctagatcctgaatactataagcgacaacaattgacagaaaaatctgatgtgtattcttttggggtggtgctattcgaagtgttgtgcgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccgaatttggaagggcaaattgcgccagagtgcttaaacaagtttgcagaagcagcatataattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtctggaatttggaatttatattaaagcttcaagatgcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttccccttgattatgaatgataataccaatatatctacagatgaaggattcgaggcattttcaggttcacatgaagttggaggaaaatacacaagcagtgctacatccatgaccagtaatagcgatgacaaattgaagagtgacactattttctcagagattttgaatccatcgggtcgatgagattgntacnactagtatgataaattacatattagntcttctctggttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15357" stop="14119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15057" g_stop="14418" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E434506" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15057" e_stop="14418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTT</genome_strand>
        <mrna_strand>CTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAATTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTGGTGCTATTCGAAGTGTTGTGCGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCGAATTTGGAAGGGCAAATTGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATATAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTCTGGAATTTGGAATTTATATTAAAGCTTCAAGATGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCCTTGATTATGAATGATAATACCAATATATCTACAGATGAAGGATTCGAGGCATTTTCAGGTTCACATGAAGTTGGAGGAAAATACACAAGCAGTGCTACATCCATGACCAGTAATAGCGATGACAAATTGAAGAGTGACACTATTTTCTCAGAGATTTTGAATCCATCGGGTCGATGAGATTGNTACNACTAGTATGAT-AA-ATTACATATTAGNTCTTCTCTGGTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E378765" ref_strand="+" ref_description="SGN-E378765 [TUS-29-B11]">
      <seq>tgcatctggtgtccttaattgtcttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattcttttggggtagtgctattcgaagtgttgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggtttcaatgaagttggagaaaatacancagcagtgcttcatccatgacccacactagtgatgacaaattgagagtgaaccattttctctgagattttgaatcatcgggacgatgagattgtacactagtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15843" stop="14156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15543" g_stop="15361" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14456" g_length="756"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="934" r_length="750" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E378765" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>939</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15543" e_stop="15361"/>
          <exon e_start="15211" e_stop="14456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCTGGTGTCCTTAATTG-GTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATG</genome_strand>
        <mrna_strand>TGCATCTGGTGTCCTTAATTGTCTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTTCAATGAAGTTGGAG-AAAATACANCAGCAGTGCTTCATCCATGACCCACACTAGTGATGACAAATTG-AGAGTG-AACCATTTTCTCTGAGATTTTGAAT-CATCGGGACGATGAGATTG-TAC-ACTAGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E616561" ref_strand="+" ref_description="SGN-E616561 [90029]">
      <seq>gttgcagtcaagagattgaatccttcgtcaaagcaaggagtccgcgagttcgaaacagagattcacatgttgtcaaagctaaaggcatgtgcatcntggtgtccttaaatttggtttattgtgatgataacaatgagatgatcttggtttatgattacatgtctcatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgccttgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcattattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcagggaaaacccatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacaattgacagaaaaatctgatgtgtattcttttggggtggtgctattcgaagtgttgtgcgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccgaatttggaagggcaaattgcgccagagtgcttaaacaagtttgcagaagcagcatataattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtctggaattgggaatttatatttaaagcttcaagtatgcagctgataatagaggtcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15931" stop="14394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15631" g_stop="15361" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14694" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="796" r_length="520" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E616561" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15631" e_stop="15361"/>
          <exon e_start="15211" e_stop="14694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCT-AAGGCATGTGCATC-TGGTGTCCTT-AA-TTGG-TTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATA-TTAAAGCTTCAAG-AAGCAGCTGATAATAGAGGTCAC</genome_strand>
        <mrna_strand>GTTGCAGTCAAGAGATTGAATCCTTCGTCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGTTGTCAAAGCTAAAGGCATGTGCATCNTGGTGTCCTTAAATTTGGTTTATTGTGATGATAACAATGAGATGATCTTGGTTTATGATTACATGTCTCATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTTGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATTATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGGAAAACCCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAATTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTGGTGCTATTCGAAGTGTTGTGCGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCGAATTTGGAAGGGCAAATTGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATATAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTCTGGAATTGGGAATTTATATTTAAAGCTTCAAGTATGCAGCTGATAATAGAGGTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E703205" ref_strand="+" ref_description="SGN-E703205 [FA20DD09]">
      <seq>gaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattcttttggggtagtgctattcgaagtgttgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttgggatttggaatttatattaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16003" stop="14423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15703" g_stop="15361" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14723" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="832" r_length="489" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E703205" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15703" e_stop="15361"/>
          <exon e_start="15211" e_stop="14723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGC</genome_strand>
        <mrna_strand>GAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGGATTTGGAATTTATATTAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E307412" ref_strand="+" ref_description="SGN-E307412 [cLEY-12-I16]">
      <seq>atcacttgtacaaaactgataatgctccacttcgatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattctttcggggtagtgctattcgaagtggtgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaattgggctgattgtgctggtaggagctgtaaaaaaggaaatcttcgacaaataattgatccaaatttggaaggacaaatcgcgccaaagtgcttaaacaagtttgcagaagccgcatacaattgcttgaaggatcaaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15756" stop="14477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15456" g_stop="15361" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14777" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="531" r_length="435" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E307412" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15456" e_stop="15361"/>
          <exon e_start="15211" e_stop="14777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAG</genome_strand>
        <mrna_strand>ATCACTTGTACAAAACTGATAATGCTCCACTTCGATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTCGGGGTAGTGCTATTCGAAGTGGTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTGGGCTGATTGTGCTGGTAGGAGCTGTAAAAAAGGAAATCTTCGACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAAAGTGCTTAAACAAGTTTGCAGAAGCCGCATACAATTGCTTGAAGGATCAAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E371036" ref_strand="+" ref_description="SGN-E371036 [TUS-29-B11]">
      <seq>tgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattcttttggggtagtgctattcgaagtgttgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15843" stop="14506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15543" g_stop="15361" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14806" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="589" r_length="406" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E371036" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15543" e_stop="15361"/>
          <exon e_start="15211" e_stop="14806"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGC</genome_strand>
        <mrna_strand>TGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E211936" ref_strand="+" ref_description="SGN-E211936 [cLEC-66-G8]">
      <seq>aactgcaacaggcaattttgatgaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattcttttggggtagtgctattcgaagtgttgtgtgctagaccagcattaattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16025" stop="14641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15725" g_stop="15361" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14941" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="636" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E211936" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15725" e_stop="15361"/>
          <exon e_start="15211" e_stop="14941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCC</genome_strand>
        <mrna_strand>AACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E271920" ref_strand="+" ref_description="SGN-E271920 [cLEM-8-P24]">
      <seq>gtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaagtaaaaaggatatcatcattcatcgagatgtgaaatcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcagttcacttagtggatcaagaaaaactcatgttatcactgttgtgaaaagaaacttttcatatttagatcctgaatactataagcgaccacagttgacagaaaaatctgatgtgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15833" stop="14695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15533" g_stop="15361" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14995" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="390" r_length="217" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E271920" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15533" e_stop="15361"/>
          <exon e_start="15211" e_stop="14995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTA</genome_strand>
        <mrna_strand>GTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAA.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAATCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCAGTTCACTTAGTGGATCAAGAAAAACTCATGTTATCACTGTTGTGAAAAGAAACTTTTCATATTTAGATCCTGAATACTATAAGCGACCACAGTTGACAGAAAAATCTGATGTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272405" ref_strand="+" ref_description="SGN-E272405 [cLEM-19-K20]">
      <seq>cgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15887" stop="14697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15587" g_stop="15361" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14997" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="442" r_length="215" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E272405" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15587" e_stop="15361"/>
          <exon e_start="15211" e_stop="14997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTG</genome_strand>
        <mrna_strand>CGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E297601" ref_strand="+" ref_description="SGN-E297601 [cLET-28-H20]">
      <seq>gacaggcggctcacgctcattattactaccatccgatctgtgccgacactttttactagaagagataaaaactgcaacaggcaattttgatgaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagcggatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16094" stop="14792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15794" g_stop="15361" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="15092" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="554" r_length="120" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E297601" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15794" e_stop="15361"/>
          <exon e_start="15211" e_stop="15092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAG</genome_strand>
        <mrna_strand>GACAGGCGGCTCACGCTCATTATTACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGCGGATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E484253" ref_strand="+" ref_description="SGN-E484253 [cSTE-12-L21]">
      <seq>tctccgtgcccgaatcctgaatttttctttccgaaataattcaccaccaaacaaccaataataagagaccatcatcacacatcattgctgttatcactgcagtggctgttattagcggaattgctctgctttcaattctctgtttcttaattttccggcggtggaaaaggggaaaagaaacttcatacaagcgttacaaagtcatcatggatccctttgtcaattacatcgaactcaacccaaagaaccggcggctcaggctcatcagcgctaccatccgatctgtgccgacactttttactagaagagataaaaacagcaacatgcaattttgatgaaaaatttgtgattggctatggaggttttggtaatgtatacaaagggtacatagacaacggcgcaaccatagttgcagtcaagagattgaatccttcatcaaagcaaggagtccacgagttcgaaacagagattcacatgttgtcaaagctaaggcatgtgcatctggtatccttaattggttattgtgatgataacaatgagatgatcttggtttatgattacatgtctcatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgccttgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtatacggtcacttaattctatacttgtatctgctctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16335" stop="15030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16035" g_stop="15354" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E484253" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16035" e_stop="15354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCGTG-CCGAATCCTGAAGTTTTCTTTCCG-AATAATTCACCACCAAACAA-CAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAG-ATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACG</genome_strand>
        <mrna_strand>TCTCCGTGCCCGAATCCTGAATTTTTCTTTCCGAAATAATTCACCACCAAACAACCAATAATAAGAGACCATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGCTTTCAATTCTCTGTTTCTTAATTTTCCGGCGGTGGAAAAGGGGAAAAGAAACTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGAACTCAACCCAAAGAACCGGCGGCTCAGGCTCATCAGCGCTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACAGCAACATGCAATTTTGATGAAAAATTTGTGATTGGCTATGGAGGTTTTGGTAATGTATACAAAGGGTACATAGACAACGGCGCAACCATAGTTGCAGTCAAGAGATTGAATCCTTCATCAAAGCAAGGAGTCCACGAGTTCGAAACAGAGATTCACATGTTGTCAAAGCTAAGGCATGTGCATCTGGTATCCTTAATTGGTTATTGTGATGATAACAATGAGATGATCTTGGTTTATGATTACATGTCTCATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTTGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E394847" ref_strand="+" ref_description="SGN-E394847 [TUS-43-A9]">
      <seq>ctaacccagattctgcatatcaaaatgctatcttaaatggattagaaattttcaagttgaacgactccaatggaaacctctccgtgccgaatcctgaagttttctttccgaataattcaccaccaaacaacaataagaaaaagaaatcatcacacatcattgctgttatcactgcagtggctgttattagcggaattgctctgttttcaattctctgtttcttgattttccggcggtggagaaggggaaaagatcttcatacaagcgttacaaagtcatcatggatccctttgtcaattacatcggactcaacccaaaggacaggcggctcacgctcatcatcactaccatccgatctgtgccgacactttttactagaagagataaaaactgcaacaggcaattttgatgaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16413" stop="15124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16113" g_stop="15424" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E394847" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16113" e_stop="15424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTC</genome_strand>
        <mrna_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E426892" ref_strand="+" ref_description="SGN-E426892 [STM-47-I18]">
      <seq>ggaaacctctccgtgccgaatcctgaatttttctttccgaataattcaccaccaaacaacaataataagagatcatcatcacacatcattgctgttatcactgcagtggctgttattagcggaattgctctgctttcaattctctgtttcttaattttccggcggtggaaaaggggaaaagaacttcatacaagcgttacaaagtcatcatggatccctttgtcaattacatcgaactcaacccaaagaaccggcggctcaagctcatcagcgctaccatccgatctgtgccgacactttttactagaagagataaaaacagcaacatgcaattttgatgaaaaatttgtgattggctatggaggttttggtaatgtatacaaagggtacatagacaacggcgcaaccatagttgcagtcaagagattgaatccttcatcaaagcaaggagtccacgagttcgaaacagagattcacatgttgtcaaagctaaggcatgtgcatctggtatccttaattggttattgtgatgataacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16342" stop="15202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16042" g_stop="15502" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E426892" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16042" e_stop="15502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATG</genome_strand>
        <mrna_strand>GGAAACCTCTCCGTGCCGAATCCTGAATTTTTCTTTCCGAATAATTCACCACCAAACAACAATAATAAGAGATCATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGCTTTCAATTCTCTGTTTCTTAATTTTCCGGCGGTGGAAAAGGGGAAAAGAACTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGAACTCAACCCAAAGAACCGGCGGCTCAAGCTCATCAGCGCTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACAGCAACATGCAATTTTGATGAAAAATTTGTGATTGGCTATGGAGGTTTTGGTAATGTATACAAAGGGTACATAGACAACGGCGCAACCATAGTTGCAGTCAAGAGATTGAATCCTTCATCAAAGCAAGGAGTCCACGAGTTCGAAACAGAGATTCACATGTTGTCAAAGCTAAGGCATGTGCATCTGGTATCCTTAATTGGTTATTGTGATGATAACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E397026" ref_strand="+" ref_description="SGN-E397026 [TUS-44-B10]">
      <seq>ctaacccagattctgcatatcaaaatgctatcttaaatggattagaaattttcaagttgaacgactccaatggaaacctctccgtgccgaatcctgaagttttctttccgaataattcaccaccaaacaacaataagaaaaagaaatcatcacacatcattgctgttatcactgcagtggctgttattagcggaattgctctgttttcaattctctgtttcttgattttccggcggtggagaaggggaaaagatcttcatacaagcgttacaaagtcatcatggatccctttgtcaattacatcggactcaacccaaaggacaggcggctcacgctcatcatcactaccatccgatctgtgccgacactttttactagaagagataaaaactgcaacaggcaattttgatgaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagaaattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16413" stop="15212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16113" g_stop="15516" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E397026" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16113" e_stop="15516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTG</genome_strand>
        <mrna_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAAATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E605568" ref_strand="+" ref_description="SGN-E605568 [21491]">
      <seq>cacaaaaatggagctgaaaagataatagaagcagagttagaggaaattcccaatccagtcccgggctgtaattggccatagtcctagaggttgtgtaaactatggttggcgcagtataagccggggttttaggagtgtaagtgatgctggcatcatcaaaatgaggagtttgatagccatatccaacaacaaatgcatcatctgaatcccatacacgatacatccctgtatcctctgtgctaccaacaaaatatcctcccacgttcagcctgtacaaagtttcaagagcagtgctgttattgatgttatatggattagtattcccagccaattttacgtctccatggatgtaaagatcagttggcatagaaagtatctcaatcccattaacaaaagcataagaatttggtgaaggagaaaaggttaatttgagtatctgagtttcatcaacattgatgacatattctttttgaacttgttttctactacttgcggagactgtgaggaaagcactgaagttactcaaaagggttaaatgattagctgtgacggagaaaaaagattcagctttgtcgaagccggaataattggcagggtagaaatagagacggaggaatattgtgccaggggtaacacggaaagtgtagtgaattgagatctcataatacgagcaccagttgtataaggaactctattgaccgaaggatcttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="15994" stop="17310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16294" g_stop="17010" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="713" r_length="713" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E605568" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E605568" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16294" e_stop="17010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAAAATGGAGCCTGAAAAGATACAAGAAACCAGAGTTTAGAGGGAATTCCCAATACAGTCCCGAGCTGTAATTGTCCATAATCCTCGAGGTTGTGTAAACTATGGTTGGCGCAGTATAATTCGGGGTTTCAGAAGTGTAAGTGATGTTGGCATCAGGAAAATGAGGAGTTTGATAGCCTAATCCAACAACAAATGCATTATCTGAATCCCATACACGATACATCCCTGTATCCTCTGTGCTTTCAACTAAATTGCCTCCCACGTTCAGCCTGTACAATGTTTCAAGAGCAGTGCTATTATTGATGTTATATGGAATAGTATTCCCAGTCAATTTGACGTCTCCATGGATGTAAAGATCAGTTGGCATAGAAAGTATCTCAATCCCATTAACAAAAGCATAAGAGTTTGGTGAAGGAGAAAAGGTTAATTTGAGCATCTGTGTTTCATCAACATTGATGACATATTCTTTTTGAACAGCTTTAGTACTACTTGCAGAGACTGTGAAGAAAGCACTGAAGTTACTCAAGAGGGTTAAATTATTAGCTGTGACGGAGAAAAAAGAATCAGCTTTGTTAAAACCGGAGTAATTGGCAGGGTAGAAATAGAGACGGAGGAATATTGTGCCAGGGGTAACACGGAAAGTATAGGTGAATTGAGATCTCATAATACGAATACCAGTCGTATAAGGAATTCTATTGACAGAAGGATCTTGTT</genome_strand>
        <mrna_strand>CACAAAAATGGAG-CTGAAAAGATAATAG-AAGCAGAG-TTAGAGGAAATTCCCAATCCAGTCCCGGGCTGTAATTGGCCATAGTCCTAGAGGTTGTGTAAACTATGGTTGGCGCAGTATAAGCCGGGGTTTTAGGAGTGTAAGTGATGCTGGCATCATCAAAATGAGGAGTTTGATAGCCATATCCAACAACAAATGCATCATCTGAATCCCATACACGATACATCCCTGTATCCTCTGTGCTACCAACAAAATATCCTCCCACGTTCAGCCTGTACAAAGTTTCAAGAGCAGTGCTGTTATTGATGTTATATGGATTAGTATTCCCAGCCAATTTTACGTCTCCATGGATGTAAAGATCAGTTGGCATAGAAAGTATCTCAATCCCATTAACAAAAGCATAAGAATTTGGTGAAGGAGAAAAGGTTAATTTGAGTATCTGAGTTTCATCAACATTGATGACATATTCTTTTTGAACTTGTTTTCTACTACTTGCGGAGACTGTGAGGAAAGCACTGAAGTTACTCAAAAGGGTTAAATGATTAGCTGTGACGGAGAAAAAAGATTCAGCTTTGTCGAAGCCGGAATAATTGGCAGGGTAGAAATAGAGACGGAGGAATATTGTGCCAGGGGTAACACGGAAAGTGTA-GTGAATTGAGATCTCATAATACGAGCACCAGTTGTATAAGGAACTCTATTGACCGAAGGATCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278164" ref_strand="+" ref_description="SGN-E278164 [cLER-9-G21]">
      <seq>tttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgcaagtagtactaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactgatctttacatccatggagacgtcaaattgactgggaatactattccatataacatcaataatagcactgctcttgaaacattgtacaggctgaacgtgggaggcaatttagttgaaagcacagaggatacagggatgtatcgtgtatgggattcagataatgcatttgttgttggattaggctatcaaactcctcattttcctgatgccaacatcacttacacttctgaaaccccgaattatactgcgccaaccatagtttacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17198" stop="16088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16898" g_stop="16388" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E278164" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16898" e_stop="16388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACA</genome_strand>
        <mrna_strand>TTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E736572" ref_strand="+" ref_description="SGN-E736572 [LC06BC01]">
      <seq>atcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgcaagtagtactaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactgatctttacatccatggagacgtcaaattgactgggaatactattccatataacatcaataatagcactgctcttgaaacattgtacaggctgaacgtgggaggcaatttagttgaaagcacagaggatacagggatgtatcgtgtatgggattcagataatgcatttgttgttggattaggctatcaaactcctcattttcctgatgccaacatcacttacacttctgaaaccccgaattatactgcgccaaccatagtttacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17524" stop="16089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17224" g_stop="16389" g_length="836"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="836" r_length="836" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E736572" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17224" e_stop="16389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACAC</genome_strand>
        <mrna_strand>ATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E487556" ref_strand="+" ref_description="SGN-E487556 [cSTE-25-N16]">
      <seq>cattactttacttttctttctcttcttacaactcataaccgccactatttctaccacgccgccaccgtataacgccactgtctatgtcttgcttaactgtggcgcacaatcagccaccaccgatgatactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatccacaacagccacagcttctgaacaagatccttcggtcaatagagttccttatacgactggtgctcgtattatgagatctcaattcacctacactttccgtgttacccctggcgccaaattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctccgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcctcacagtctccgcaagtagtagtaaacaagttcaaaaagaatatgtcatcaatgttgatgaaactcagatactcaaattaaccttttctccttcaccgaactcttatgcttttgttaatgggattgagatactttccatgccaactgatctttacatccatggagatgtcacattggctgggcatactaatccatataacatcaataacagcactgctcttgaaactttgtacaggctgaacgtgggaggcaatttagttgatagcacaaaggatacagggatgtatcgtgtatgggattcagatgatgcatttgttgttggattgggctatcaaactcctcattttgatgtcgacatcacttacacttctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17525" stop="16124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17225" g_stop="16424" g_length="802"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="799" r_length="799" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E487556" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17225" e_stop="16424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAA</genome_strand>
        <mrna_strand>CATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTTCTACCACGCCGCCACCGTATAACGCCACTGTCTATGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGATGATACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCCACAACAGCCACAGCTTCTGAACAAGATCCTTCGGTCAATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCGCCAAATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCTCACAGTCTCCGCAAGTAGTAGTAAACAAGTTCAAAAAGAATATGTCATCAATGTTGATGAAACTCAGATACTCAAATTAACCTTTTCTCCTTCACCGAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCCATGCCAACTGATCTTTACATCCATGGAGATGTCACATTGGCTGGGCATACTAATCCATATAACATCAATAACAGCACTGCTCTTGAAACTTTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGATAGCACAAAGGATACAGGGATGTATCGTGTATGGGATTCAGATGATGCATTTGTTGTTGGATTGGGCTATCAAACTCCTCA-TTT--TGATGTCGACATCACTTACACTTCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E406579" ref_strand="+" ref_description="SGN-E406579 [PPI-4-C18]">
      <seq>cgaggttactttacttttctttctcttcttacaactcacaaccgccacctacttctaccacgccgccaccgtataacgccactgtctacgtcttgcttaacctgtggcgcacaatcagccaccaccgatgatactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatccacaacagccacagcttctgaacaagaatccttcggtcaatagagttccttatacgactggtgctcgtattatgagaatctcaattcacctacactttccgtgttacccctggcgccaaattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctccgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcctcacagtctccgcaagtagtagtaaacaagttcaaaaagaatatgtcatcaatgttgatgaaactcagatactcaaattaaccttttctccttcaccgaactcttatgcttttgttaatgggattgagatactttccatgccaactgatctttacatccatggnagatgtcacattggctgggcatactaatccatataacatcaataacagcactgctcttgaaactttgtacaggctgaacgtgggaggcaatttagttgatagcacaaaggatcagggatgtatcgtgtatgggattcagatgatgcatttgttgttggattgggctatcaaactcctcattttgatgtcgacatcactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17523" stop="16135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17229" g_stop="16435" g_length="795"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="795" r_length="795" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E406579" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17229" e_stop="16435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCA-CTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAA-CTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAG-ATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAG-ATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGG-AGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTT</genome_strand>
        <mrna_strand>CGAG-GTTACTTTACTTTTCTTTCTCTTCTTACAACTCACAACCGCCACCTACTTCTACCACGCCGCCACCGTATAACGCCACTGTCTACGTCTTGCTTAACCTGTGGCGCACAATCAGCCACCACCGATGATACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCCACAACAGCCACAGCTTCTGAACAAGAATCCTTCGGTCAATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGAATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCGCCAAATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCTCACAGTCTCCGCAAGTAGTAGTAAACAAGTTCAAAAAGAATATGTCATCAATGTTGATGAAACTCAGATACTCAAATTAACCTTTTCTCCTTCACCGAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCCATGCCAACTGATCTTTACATCCATGGNAGATGTCACATTGGCTGGGCATACTAATCCATATAACATCAATAACAGCACTGCTCTTGAAACTTTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGATAGCACAAAGGAT-CAGGGATGTATCGTGTATGGGATTCAGATGATGCATTTGTTGTTGGATTGGGCTATCAAACTCCTCA-TTT--TGATGTCGACATCACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E487416" ref_strand="+" ref_description="SGN-E487416 [cSTE-25-O16]">
      <seq>cattactttacttttctttctcttcttacaactcataaccgccactatttctaccacgccgccaccgtataacgccactgtctatgtcttgcttaactgtggcgcacaatcagccaccaccgatgatactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatccacaacagccacagcttctgaacaagatccttcggtcaatagagttccttatacgactggtgctcgtattatgagatctcaattcacctacactttccgtgttacccctggcgccaaattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctccgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcctcacagtctccgcaagtagtagtaaacaagttcaaaaagaatatgtcatcaatgttgatgaaactcagatactcaaattaaccttttctccttcaccgaactcttatgcttttgttaatgggattgagatactttccatgccaactgatctttacatccatggagatgtcacattggctgggcatactaatccatataacatcaataacagcactgctcttgaaactttgtacaggctgaacgtgggaggcaatttagttgatagcacaaagatacagggatgtatcgtgtatgggattcagatgatgcatttgttgttggattggctatcaactcctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17525" stop="16158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17225" g_stop="16458" g_length="768"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="765" r_length="765" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E487416" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487416" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17225" e_stop="16458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCA</genome_strand>
        <mrna_strand>CATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTTCTACCACGCCGCCACCGTATAACGCCACTGTCTATGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGATGATACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCCACAACAGCCACAGCTTCTGAACAAGATCCTTCGGTCAATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCGCCAAATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCTCACAGTCTCCGCAAGTAGTAGTAAACAAGTTCAAAAAGAATATGTCATCAATGTTGATGAAACTCAGATACTCAAATTAACCTTTTCTCCTTCACCGAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCCATGCCAACTGATCTTTACATCCATGGAGATGTCACATTGGCTGGGCATACTAATCCATATAACATCAATAACAGCACTGCTCTTGAAACTTTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGATAGCACA-AAGATACAGGGATGTATCGTGTATGGGATTCAGATGATGCATTTGTTGTTGGATT-GGCTATC-AACTCCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334080" ref_strand="+" ref_description="SGN-E334080 [cTOD-24-N17]">
      <seq>ttgtgtataattaattgttccttggaacagctaatatctccttacaccaactccccatggcaaccatcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgcaagtagtactaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactgatctttacatccatggagacgtcaaattgactgggaatactattccatataacatcaataatagcactgctcttgaaacattgtacaggctgaacgtgggaggcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17589" stop="16245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17289" g_stop="16545" g_length="745"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="745" r_length="745" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E334080" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17289" e_stop="16545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTT</genome_strand>
        <mrna_strand>TTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E358246" ref_strand="+" ref_description="SGN-E358246 [cLHT-23-N22]">
      <seq>ttcgtattatgagatctcaattcacctacactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgaatcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcactgtctctgcaagtagtagtaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactcatctttacatccatggagacgtcaaattgactgggcatactaatacatataacatcaataatagcactgctcttgaaactttgtacaggctgaacgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17268" stop="16256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16968" g_stop="16556" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E358246" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16968" e_stop="16556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTG</genome_strand>
        <mrna_strand>TTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACTGTCTCTGCAAGTAGTAGTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTCATCTTTACATCCATGGAGACGTCAAATTGACTGGGCATACTAATACATATAACATCAATAATAGCACTGCTCTTGAAACTTTGTACAGGCTGAACGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E406798" ref_strand="+" ref_description="SGN-E406798 [PPI-5-C11]">
      <seq>ccttacttttctttctcttgttacaacctcacaacggccaccactttctaccacgcccgccaccgtataacgccactgtctttgtcttgcttaactgtggcgcacaatcagccaccaccgatgaaactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatctacaacagccacagcttctgaacaagatccgtcggtcgatagagttccttatacgactggtgctcgtattatgagatctcaattcacctacactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctctgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcctcacagtctccgcaagtagtagtaaacaagttcaaaaagaatatgtcatcaatgttgatgaaactcagatactcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactaatctttacatccatggagacgtaaaattggctgggaatactaatccatataacatcaataacagcactgctcttgaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17520" stop="16275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17220" g_stop="16574" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="650" r_length="650" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E406798" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17220" e_stop="16574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTACTTTTCTTTCTCTTCTTACAA-CTCATAACCGCCACTA-TTGCTACCACG-TCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACA</genome_strand>
        <mrna_strand>CCTTACTTTTCTTTCTCTTGTTACAACCTCACAACGGCCACCACTTTCTACCACGCCCGCCACCGTATAACGCCACTGTCTTTGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGATGAAACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCTACAACAGCCACAGCTTCTGAACAAGATCCGTCGGTCGATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCTGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCTCACAGTCTCCGCAAGTAGTAGTAAACAAGTTCAAAAAGAATATGTCATCAATGTTGATGAAACTCAGATACTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTAATCTTTACATCCATGGAGACGTAAAATTGGCTGGGAATACTAATCCATATAACATCAATAACAGCACTGCTCTTGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E330782" ref_strand="+" ref_description="SGN-E330782 [cTOD-8-N6]">
      <seq>aactccccatggcaaccatcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgcaagtagtactaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactgatctttacatccatggagacgtcaaattgactgggaatacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17541" stop="16312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17241" g_stop="16612" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E330782" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17241" e_stop="16612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTA</genome_strand>
        <mrna_strand>AACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E570758" ref_strand="+" ref_description="SGN-E570758 [15392]">
      <seq>caaccattactttacttttctttctcttcttacaactcataaccgccactatttctaccacgccgacgaccgatataacgccactagtctatgtcgttgcttaagctgtggcgcacaatcagccaccaccgatgatactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatccacaacagccacagcttctgaacaagatccttcggtcaatagagttccttatacgactggtgctcgtattatgagatctcaattcacctacactttccgtgttacccctggcgccaaattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctccgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcctcacagtctccgcaagtagtagtaaacaagttcaaaaagaatatgtcatcaatgttgatgaaactcagatactcaaattaaccttttctccttcaccgaactcttatgcttttgttaatgggattgagatactttccatgccaactgatctttacatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17529" stop="16340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17229" g_stop="16640" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E570758" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17229" e_stop="16640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCG-CCACCG-TATAACGCCAC-AGTCTTCGTC-TTGCTTAA-CTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCAT</genome_strand>
        <mrna_strand>CAACCATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTTCTACCACGCCGACGACCGATATAACGCCACTAGTCTATGTCGTTGCTTAAGCTGTGGCGCACAATCAGCCACCACCGATGATACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCCACAACAGCCACAGCTTCTGAACAAGATCCTTCGGTCAATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCGCCAAATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCTCACAGTCTCCGCAAGTAGTAGTAAACAAGTTCAAAAAGAATATGTCATCAATGTTGATGAAACTCAGATACTCAAATTAACCTTTTCTCCTTCACCGAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCCATGCCAACTGATCTTTACATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E335876" ref_strand="+" ref_description="SGN-E335876 [cTOE-6-F22]">
      <seq>attgttccttggaacagctaatatctccttacaccaactccccatggcaaccatcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgccagtagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17576" stop="16481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17276" g_stop="16781" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E335876" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17276" e_stop="16781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGT</genome_strand>
        <mrna_strand>ATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCCAGTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E366031" ref_strand="+" ref_description="SGN-E366031 [cLPT-11-P12]">
      <seq>ttccttggaacaactaatatctccttacacccaactccccatggcaaccattactttacttttctttctcttcttacaactcataaccgccactatttctaccacgtcgccaccgtataacgccacagtctttgtcttgcttaactgtggcgcacaatcagccaccaccgacgatactcaccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttcggtcaatagaattccttatacgactggtgttcgtattatgagatctcaattcacctacactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactacggtttcaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcactgtctctgcaagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17572" stop="16482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17272" g_stop="16782" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E366031" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17272" e_stop="16782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTGGAACAGCTAATATCTCCTTACA-CCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAG</genome_strand>
        <mrna_strand>TTCCTTGGAACAACTAATATCTCCTTACACCCAACTCCCCATGGCAACCATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTTCTACCACGTCGCCACCGTATAACGCCACAGTCTTTGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGACGATACTCACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCGGTCAATAGAATTCCTTATACGACTGGTGTTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTACGGTTTCAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACTGTCTCTGCAAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421963" ref_strand="+" ref_description="SGN-E421963 [STM-33-J10]">
      <seq>ttactttacttttctttctcttcttacaactcataaccgccactatttctaccacgccgccaccgtataacgccactgtctatgtcttgcttaactgtggcgcacaatcagccaccaccgatgatactgaccgtcgatgggatactgatactcactttccaaatttcttaccttccaacttttcaagcatatccacaacagccacagcttctgaacaagatccttcggtcaatagagttccttatacgactggtgctcgtattatgagatctcaattcacctacactttccgtgttacccctggcgccaaattcctccgtctctatttctaccctgccaattactccggcttcaacaaagctgaatcttttttctccgtcacagctaatcatttaaccctcttgagtaacttcagtgctttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17523" stop="16502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17223" g_stop="16800" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E421963" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E421963" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17223" e_stop="16800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTT</genome_strand>
        <mrna_strand>TTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTTCTACCACGCCGCCACCGTATAACGCCACTGTCTATGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGATGATACTGACCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCAACTTTTCAAGCATATCCACAACAGCCACAGCTTCTGAACAAGATCCTTCGGTCAATAGAGTTCCTTATACGACTGGTGCTCGTATTATGAGATCTCAATTCACCTACACTTTCCGTGTTACCCCTGGCGCCAAATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGCTTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGTAACTTCAGTGCTTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201810" ref_strand="+" ref_description="SGN-E201810 [cLEC-11-B12]">
      <seq>ttaattgttccttggaacagctaatatctccttacaccaactccccatggcaaccatcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17579" stop="16550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17279" g_stop="16850" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E201810" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17279" e_stop="16850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTC</genome_strand>
        <mrna_strand>TTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E347630" ref_strand="+" ref_description="SGN-E347630 [cTOF-26-L21]">
      <seq>gatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttatcgtaaattttaggtgttttcgtttgaacagtatgctttattatgtcttcaaagtattactatgattttcgttagaaataacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22799" stop="21637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22499" g_stop="21931" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E347630" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22499" e_stop="21931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGGTGTTTTCGTTTGAACAGTATGCTTTATTATGTCTTCAAAGTATTACTATGATTTTCGTTAGAAATAACAAAATCCTGA</genome_strand>
        <mrna_strand>GATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGGTGTTTTCGTTTGAACAGTATGCTTTATTATGTCTTCAAAGTATTACTATGATTTTCGTTAGAAATAACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E281804" ref_strand="+" ref_description="SGN-E281804 [cLER-14-P15]">
      <seq>taaaatcaatgaggatgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgtttttttttttacattttgtatgtatttatttattggctctttaagaactaaatggcttgattttttatcgtaaattttaggtgttttcgtttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22818" stop="21693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22518" g_stop="21993" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E281804" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22518" e_stop="21993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATCAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTG-TTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGGTGTTTTCGTTTGAACA</genome_strand>
        <mrna_strand>TAAAATCAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTTACATTTTGTATGTATTTATTTATTGGCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGGTGTTTTCGTTTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540723" ref_strand="+" ref_description="SGN-E540723 [TUS-61-C8]">
      <seq>tgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttatcgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22803" stop="21716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22503" g_stop="22009" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E540723" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22503" e_stop="22009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGG</genome_strand>
        <mrna_strand>TGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295827" ref_strand="+" ref_description="SGN-E295827 [cLET-25-F18]">
      <seq>taaaatcaatgaggatgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttatcgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22818" stop="21716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22518" g_stop="22017" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="503" polyA_stop="514"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295827" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22518" e_stop="22017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATCAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAA</genome_strand>
        <mrna_strand>TAAAATCAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E222487" ref_strand="+" ref_description="SGN-E222487 [cLEL-16-A1](-)">
      <seq>tgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggccaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccccagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatccactgtctctttaagaacccactggcttgattttttatcgtaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22784" stop="21716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22484" g_stop="22017" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="469" polyA_stop="489"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E222487" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222487" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22484" e_stop="22017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAA</genome_strand>
        <mrna_strand>TGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGCCAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCCCAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATCCACTGTCTCTTTAAGAACCCACTGGCTTGATTTTTTATCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E291911" ref_strand="+" ref_description="SGN-E291911 [cLET-7-A19]">
      <seq>gacgacgatgatgctccttgtgttacttgtcaccgggataaaggtggaatcggtatcaaaatgtaacgggacaagcagcagcatatatgcttgtgttctggacgacgatgaattgatgatggaatcagaaacaagtagtagcgatgtaacattaattcccttgctgcatgtggtaatgctagatcaggaagattaaattacaatgccacagggaaaccaaagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgctactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgtgttttttttacatgtggtgtggatttattgattgtctctttaagaactaaatggcttgattttttatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22802" stop="21720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22502" g_stop="22020" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E291911" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22502" e_stop="22020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAG-GAT-T--C-----TT--CTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCG</genome_strand>
        <mrna_strand>GACGACGATGATGCTCCTTGTGTTACTTGTCACCGGGATAAAGGTGGAATCGGTATCAAAATGTAACGGGACAAGCAGCAGCATATATGCTTGTGTTCTGGACGACGATGAATTGATGATGGAATCAGAAACAAGTAGTAGCGATGTAACATTAATTCCCTTGCTGCATGTGGTAATGCTAGATCAGGAAGATTAAATTACAATGCCACAGGGAAACCAAAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCTACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTGTTTTTTTTACATGTGGTGTGGATTTATTGATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E222421" ref_strand="+" ref_description="SGN-E222421 [cLEL-16-A1](-)">
      <seq>ttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccgcagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaaaaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttttcgtccccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22656" stop="21719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22356" g_stop="22021" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="343" polyA_stop="361"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E222421" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22356" e_stop="22021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATC</genome_strand>
        <mrna_strand>TTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCGCAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAAAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284058" ref_strand="+" ref_description="SGN-E284058 [cLER-13-A16]">
      <seq>aatgaggatgacgatgatgatgctccttgtgttacttgtaaccgcgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgctcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgnatgtatttatttattgtctctttaagaactaaatggcttgatttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22811" stop="21723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22511" g_stop="22023" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E284058" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22511" e_stop="22023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTA</genome_strand>
        <mrna_strand>AATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGCGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGCTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGNATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539274" ref_strand="+" ref_description="SGN-E539274 [TUS-58-P6](-)">
      <seq>caatgaggatgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22812" stop="21723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22512" g_stop="22024" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="505"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E539274" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22512" e_stop="22024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTT</genome_strand>
        <mrna_strand>CAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548194" ref_strand="+" ref_description="SGN-E548194 [TUS-58-P6]">
      <seq>caatgaggatgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaacgaactacttgttttttttttacattttgtatgtatttatttattgtctctttaagaactaaatggcttgattttttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22812" stop="21723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22512" g_stop="22024" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="505"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E548194" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22512" e_stop="22024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTT</genome_strand>
        <mrna_strand>CAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E287231" ref_strand="+" ref_description="SGN-E287231 [cLES-15-A5]">
      <seq>aggatgacgatgatgatgctccttgtgttacttgtaaccgtgataaaggtggaatcggtatcagaatgtaacgggacaagcagcagcatagatgcttgtcttcgggacgacgatgaattgttgatggaatcagaaacaagtagtaggattcttcttgctgcaggtggtaatgctagatcaggaagattaaattacaaggccacagggaaaccagagatatgtaatgaacaaatagttggtaattgcatcaataataagaacgttaaggcaacacactgcaactttggtacccgctgcaaacgtgatgtaatatcctcctaaatattttattttatgtacaactctccaagggtgtcgttcgctttatttatttgaaccaataacatgatctactcttgttcaagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="22807" stop="21797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22507" g_stop="22094" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E287231" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22507" e_stop="22094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTA</genome_strand>
        <mrna_strand>AGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349364" ref_strand="+" ref_description="SGN-E349364 [cTOS-1-K6]">
      <seq>cagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtacttttaagttgactccagtatttggaaataggttatgttgccccccaaattcacttgttaggatatcataccagaaggaattccttgcgggctggaacaattcactcttaatgaattccagttcagatcaggtgttatgattcgacgcaaatgtcaacttttggtcctgtttggccatgcgattggtatcatgacgagaaatcgtaatatctacagtaagttgtaaaattattagaataatatcaattttttattttttagtcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26212" stop="24860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25912" g_stop="25520" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25519" i_stop="25264" i_length="256">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25263" g_stop="25160" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="496" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E349364" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25912" e_stop="25520"/>
          <exon e_start="25263" e_stop="25160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTGGTGAGTCTTAAATTCGTTTCATCATTATCTTGCAACATCAATTGTGCAACTCATTACAATTTGTTGTTTGATATAAAAGCTGTATTCAAGTTGATGATAAATTTTGTTAATAGCGTCAATCTGATGCATAAAAGTGTGTTTTGCATGTGAAATTGTACATGTGGTCAAAAGTGACTGAGGTGGCGGGTTTGTGATTTAGTCAGTTGGTCAATTTAGGTATATTTACACAATCTTAAATGGTTTAAATATTTTTTAGGTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTCAACA</genome_strand>
        <mrna_strand>CAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTG................................................................................................................................................................................................................................................................GTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E431705" ref_strand="-" ref_description="SGN-E431705 [STM-55-L14]">
      <seq>gttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcacttatgctcgcttctgcagatataatattttctaaagcttgaaattttgatttttttttctttgggcaaaaatatactatttgttaacttacagtagccatttttatcttgtccgtcgagctttcgggctgtatttctatgtgacgactctttgctttgtactattaagttgactcaagtatttggaaataggttttgttgccctacaaattcactttttaggatatcatagcagaaggaattccttacaggctggaataaaacactcttgatcatttctcgttcaaaaaagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31061" stop="25249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30761" g_stop="30604" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28338" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="276" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28337" i_stop="25812" i_length="2526">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25811" g_stop="25548" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="535" r_length="259" r_score="0.871"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E431705" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431705" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30761" e_stop="30604"/>
          <exon e_start="28455" e_stop="28338"/>
          <exon e_start="25811" e_stop="25548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGT</genome_strand>
        <mrna_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCACTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAATTTTGAT--T-TTTTTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTATCTTGTCCGTCGAGCTTTCGGGCTGTATTTCTATGTGACGAC--TCTTTGCTTTGTACTATTAAGTTGACTCAAGTATTTGGAAATAGGTTTTGTTGCCCTACAAATTCACTTTTTAGGATATCATAGCAGAAGGAATTCCTTACAGGCTGGAATAAAACACTCTTGATCATTTCTCGTTCAAAAAAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E431704" ref_strand="+" ref_description="SGN-E431704 [STM-55-L14]">
      <seq>gttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcacttatgctcgcttctgcagatataatattttctaaagcttgaaattttgatttttttttctttgggcaaaaatatactatttgttaacttacagtagccatttttatcttgtccgtcgagctttcgggctgtatttctatgtgacgactctttgctttgtactattaagttgactcaagtatttggaaataggttttgttgccctacaaattcactttttaggatatcatagcagaaggaattccttacaggctggaataattcactcttgatcatttctcgttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31061" stop="25256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30761" g_stop="30604" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28338" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="276" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28337" i_stop="25812" i_length="2526">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25811" g_stop="25552" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="531" r_length="255" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E431704" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30761" e_stop="30604"/>
          <exon e_start="28455" e_stop="28338"/>
          <exon e_start="25811" e_stop="25552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAG</genome_strand>
        <mrna_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCACTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAATTTTGAT--T-TTTTTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTATCTTGTCCGTCGAGCTTTCGGGCTGTATTTCTATGTGACGAC--TCTTTGCTTTGTACTATTAAGTTGACTCAAGTATTTGGAAATAGGTTTTGTTGCCCTACAAATTCACTTTTTAGGATATCATAGCAGAAGGAATTCCTTACAGGCTGGAATAATTCACTCTTGATCATTTCTCGTTCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E464862" ref_strand="+" ref_description="SGN-E464862 [cPRO-19-G14]">
      <seq>gttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcacttatgctcgcttctgcagatataatattttctaaagcttgaaattttgatttttttttctttgggcaaaaatatactatttgttaacttacagtagccatttttatcttgtccgtcgagctttcgggctgtatttctatgtgacgactctttgctttgtactattaagttgactcaagtatttggaaataggttttgttgccctacaaattcactttttaggatatcatagcagaaggaattccttacaggctggaataattcactcttgatcatttctcgttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31061" stop="25256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30761" g_stop="30604" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28338" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="276" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28337" i_stop="25812" i_length="2526">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25811" g_stop="25552" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="531" r_length="255" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E464862" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30761" e_stop="30604"/>
          <exon e_start="28455" e_stop="28338"/>
          <exon e_start="25811" e_stop="25552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAG</genome_strand>
        <mrna_strand>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCACTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAATTTTGAT--T-TTTTTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTATCTTGTCCGTCGAGCTTTCGGGCTGTATTTCTATGTGACGAC--TCTTTGCTTTGTACTATTAAGTTGACTCAAGTATTTGGAAATAGGTTTTGTTGCCCTACAAATTCACTTTTTAGGATATCATAGCAGAAGGAATTCCTTACAGGCTGGAATAATTCACTCTTGATCATTTCTCGTTCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244175" ref_strand="+" ref_description="SGN-E244175 [cLEE-1-B2]">
      <seq>taagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtacttttaagttgactccagtatttggaaataggttatgttgccccccaaattcacttgttaggatatcataccagaaggaattccttgcgggctggaacaattcactcttaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26739" stop="25269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26439" g_stop="26389" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="121" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25976" g_stop="25569" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="528" r_length="407" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E244175" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26439" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGA</genome_strand>
        <mrna_strand>TAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E416143" ref_strand="-" ref_description="SGN-E416143 [STM-22-H11]">
      <seq>cagcctctgagtgagaaagatcttcagaagctggatgcttacttggattttgaggcagcaaattcagcattattaaaaacctatggacttgtccatattgactgtatatcaaaaatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgttgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccaataaaattacagaagatagcacacaggcaatgcaaggtttagcaatccgctgaatgttctttgtggcagtctctttttaattttagagattggatttaattgggagaaattgttcacatctttttcagcttgaaattttgatcatctttttttttctttgggcaaaaatatactatttgttaacttacagtagccatttttcctttgtccgtggaggtttcgggctgtatttctatgtgacgactgttttttgctttgtactattaagttgactaaagtatttggaaataaaaaaaaaaaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27113" stop="25353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26809" g_stop="26752" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="85" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="195" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="293" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="363" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25652" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="691" r_length="328" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="692" polyA_stop="703"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E416143" ref_strand="-">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416143" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26809" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTT-TTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTG-TCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAG</genome_strand>
        <mrna_strand>AAGCTGGATGCTTACTTGGATTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATATTGACTGTATATCAAAAATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGTTGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAATAAAATTACAGAAGATAGCACACAGGCAATGCAAGGTTTAGCAATCCGCTGAATGTTCTTTGTGGCAGTCTCTTTTTAATTTTAGAGATTGGATTTAATTGGGAGAAATTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTCCTTTGTCCGTGGAGGTTTCGGGCTGTATTTCTATGTGACGACTGTTTTTTGCTTTGTACTATTAAGTTGACTAAAGTATTTGGAAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548511" ref_strand="+" ref_description="SGN-E548511 [TUS-61-O2](-)">
      <seq>tttaagtgtgacttgctagatatgccggctatagtncagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtacttttaagttgactccagtattggaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27204" stop="25353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26908" g_stop="26752" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="267" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="365" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="435" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25656" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="754" r_length="319" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="755" polyA_stop="773"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E548511" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26908" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAA</genome_strand>
        <mrna_strand>TTTAAGTGTGACTTGCTAGATATGCCGGCTATAGTNCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTA-TTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E689587" ref_strand="-" ref_description="SGN-E689587 [LH_Ea01E17]">
      <seq>catcctgtttgcttgaccctcgggccgaattcggcnnggggcctcgtgcngaattcggcacgaggtgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagcttacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggcaatctctttttaattttagagattggatttaattgggataaactgttcacatctttcagcttgaaattttgataatcttttttttttttggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaaattgacgactgtcgttgcttttgttgttttaagttgactccagtatttggaaaaaaaaaaaaaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26955" stop="25353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="158" r_length="108" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="256" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="326" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25976" g_stop="25656" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="646" r_length="320" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="647" polyA_stop="660"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E689587" ref_strand="-">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689587" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGC-TTTGTACTTTTAAGTTGACTCCAGTATTTGGAA</genome_strand>
        <mrna_strand>GAATTCGGCACGA-G-GTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGCTTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGCAATCTCTTTTTAATTTTAGAGATTGGATTTAATTGGGATAAACTGTTCACATC--TTTCAGCTTGAAATTTTGATAATCTTTTTTTTTTTTGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAAATTGACGACTGTCGTTGCTTTTGTTGTTTTAAGTTGACTCCAGTATTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E592185" ref_strand="+" ref_description="SGN-E592185 [45914]">
      <seq>ttctttcatgtttctaacaaagtatctggaaaccttttcgtctgaagaggcttctcatatgaacgaggctaaggaagaagctgcccgcgcaattgtcgattttgtcagatcacccgatatgtttaagtgtgacttgctagatatgccggctatagcccagttggagaaagatgctcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggactttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactctatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccagtaagattacagaagatagcacacaggcaatgcaaggtttagcaatccgctgaatgttctttgtagcggtctccacctttttcagctttgaaattttgatttttttttctttgggcaaaaatatactatttgttaacttacagtagccatttttatcttggtccgtcgagctttcgggctgtatttctatgtgacgactctttgctttgtactattaagttgactcaagtattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27878" stop="25360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27578" g_stop="27452" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="278" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="388" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="486" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="556" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25976" g_stop="25878" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="655" r_length="99" r_score="0.960"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25877" i_stop="25828" i_length="50">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.48"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25827" g_stop="25660" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="827" r_length="172" r_score="0.798"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E592185" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27578" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25878"/>
          <exon e_start="25827" e_stop="25660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTG-T-----TC-ACATCTTTTTCAGC-TTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTAT-TTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTT</genome_strand>
        <mrna_strand>TTCTTTCATGTTTCTAACAAAGTATCTGGAAACCTTTTCGTCTGAAGAGGCTTCTCATATGAACGAGGCTAAGGAAGAAGCTGCCCGCGCAATTGTCGATTTTGTCAGATCACCCGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGCCCAGTTGGAGAAAGATGCTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGACTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTCTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAGTAAGATTACAGAAGATAGCACACAGGCAATGCAAGGTTTAGCAATCCGCTGAATGTTCTTT..................................................GTAGCGGTCTCCACCTTTTTCAGCTTTGAAATTTTGAT--T-TTTTTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTATCTTGGTCCGTCGAGCTTTCGGGCTGTATTTCTATGTGACGAC--TCTTTGCTTTGTACTATTAAGTTGACTCAAGTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E230303" ref_strand="+" ref_description="SGN-E230303 [cLEL-33-E2](-)">
      <seq>ttgatcaaatgaatcaagtagtaatagtgagccgatgtacgaagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatctttttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtcctttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26719" stop="25376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26419" g_stop="26389" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="101" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25976" g_stop="25676" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="404" r_length="303" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="405" polyA_stop="420"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E230303" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26419" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC--TTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAA</genome_strand>
        <mrna_strand>TTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGAAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTCCTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E229803" ref_strand="+" ref_description="SGN-E229803 [cLEL-33-E2](-)">
      <seq>acacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttaaagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatctttttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtcctttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26219" stop="25376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25919" g_stop="25676" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="247" polyA_stop="262"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E229803" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25919" e_stop="25676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC--TTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAA</genome_strand>
        <mrna_strand>ACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAAAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTCCTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E600782" ref_strand="+" ref_description="SGN-E600782 [53802]">
      <seq>ttaagtgtgacttgctagatatgccggctatagcccagttggagaaagatgctcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggactttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactctatttcaaagatgaggttgatgtcgttggtagatcttggcctgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcaatgcaaggtttagcaatccgctgaatgttcttttgtagcggtctcttcttaatttgagagattggatttaattgggagaaattgctcacaccttttttagcttgaaattttgatcttttgtttctttgggcaaaaatatactatttgttaacttacaatagccattttatcttgtccgtcgaggctttcggggccgtatttctatgttgacgactgcctttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27204" stop="25389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26907" g_stop="26752" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="266" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="364" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="434" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25689" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="723" r_length="289" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E600782" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E600782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26907" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTC-TTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGG-TTTC-GGGCTGTATTTCAAT-TTGACGACTGTCTTTGC</genome_strand>
        <mrna_strand>TTAAGTGTGACTTGCTAGATATGCCGGCTATAGCCCAGTTGGAGAAAGATGCTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGACTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTCTATTTCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCCTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAATGCAAGGTTTAGCAATCCGCTGAATGTTCTTTTGTAGCGGTCTCTTCTTAATTTGAGAGATTGGATTTAATTGGGAGAAATTGCTCACACCTTTTTTAGCTTGAAATTTTGATC-T-TTTGTTTCTTTGGGCAAAAATATACTATTTGTTAACTTACAATAGCCA-TTTTATCTTGTCCGTCGAGGCTTTCGGGGCCGTATTTCTATGTTGACGACTGCCTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E319499" ref_strand="-" ref_description="SGN-E319499 [cTOB-15-K5]">
      <seq>tcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatctttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtcaaaaaaaaaaaaaaaaaaatcgagactagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="26882" stop="25433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26582" g_stop="26563" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="118" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="188" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25976" g_stop="25732" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="433" r_length="245" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="434" polyA_stop="452"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E319499" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319499" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26582" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCC</genome_strand>
        <mrna_strand>TCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E541207" ref_strand="+" ref_description="SGN-E541207 [TUS-61-O2]">
      <seq>ttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctcttttttattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttggggcaaaatataccatttgttaaattacagtagccatttttattttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27842" stop="25433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27542" g_stop="27452" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="242" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="352" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="450" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="520" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25976" g_stop="25733" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="763" r_length="243" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E541207" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27542" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTC</genome_strand>
        <mrna_strand>TTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTTATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTGGGGC-AAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E559734" ref_strand="+" ref_description="SGN-E559734 [19277]">
      <seq>cgcaattgttgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagcccagttggagaaagatgctcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggattttgaggcagcaaattcagcattattaaaaacctatggacttgtccatattgactgtatatcaaaaatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaacatgaatcaagtagtaatagtgagccgttgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccaataaaattacagaagcatagcacacaggcaatgcaaggtttagcaatccgctgaatgttctttgtggcagtctctttttaattttagagattggatttaattggggagaaattgttcacatctttttcaggttgaacttttgatcatctttatgttctttggggcaaaaatatactatttgttaacttacagtagccattttttcctttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27790" stop="25434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27491" g_stop="27452" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="0.95"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="191" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="301" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="400" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="470" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25976" g_stop="25734" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="718" r_length="248" r_score="0.885"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E559734" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27491" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAA-ATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAG-ATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATT-GGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTT-T-TTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCA-TTTTTATTTTGT</genome_strand>
        <mrna_strand>CGCAATTGTTGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGCCCAGTTGGAGAAAGATGCTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGATTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATATTGACTGTATATCAAAAATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAACATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGTTGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAATAAAATTACAGAAGCATAGCACACAGGCAATGCAAGGTTTAGCAATCCGCTGAATGTTCTTTGTGGCAGTCTCTTTTTAATTTTAGAGATTGGATTTAATTGGGGAGAAATTGTTCACATCTTTTTCAGGTTGAACTTTTGATCATCTTTATGTTCTTTGGGGCAAAAATATACTATTTGTTAACTTACAGTAGCCATTTTTTCCTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252305" ref_strand="+" ref_description="SGN-E252305 [cLEG-12-N23]">
      <seq>tggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatctttttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27093" stop="25434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26793" g_stop="26752" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="152" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="250" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="320" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25734" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="565" r_length="245" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E252305" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26793" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC--TTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGT</genome_strand>
        <mrna_strand>TGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E416142" ref_strand="+" ref_description="SGN-E416142 [STM-22-H11]">
      <seq>cagcctctgagtgagaaagatcttcagaagctggatgcttacttggattttgaggcagcaaattcagcattattaaaaacctatggacttgtccatattgactgtatatcaaaaatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgttgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccaataaaattacagaagatagcacacaggcaatgcaaggtttagcaatccgctgaatgttctttgtggcagtctctttttaattttagagattggatttaattgggagaaattgttcacatctttttcagcttgaaattttgatcatctttttttttctttggggcaaaatatactatttgttaacttacagtagcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27113" stop="25446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26809" g_stop="26752" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="85" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="195" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="293" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="363" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25746" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="596" r_length="233" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E416142" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26809" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTT-TTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCA</genome_strand>
        <mrna_strand>AAGCTGGATGCTTACTTGGATTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATATTGACTGTATATCAAAAATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGTTGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAATAAAATTACAGAAGATAGCACACAGGCAATGCAAGGTTTAGCAATCCGCTGAATGTTCTTTGTGGCAGTCTCTTTTTAATTTTAGAGATTGGATTTAATTGGGAGAAATTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTCTTTGGGGCAAAATATACTATTTGTTAACTTACAGTAGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745534" ref_strand="+" ref_description="SGN-E745534 [GI|47105920]">
      <seq>gcccgactaagagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcgcaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcgtgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttttgggcaaaaatataccatttgttaaattacagcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31074" stop="25450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30775" g_stop="30604" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="302" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="441" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="654" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="793" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="794" r_stop="944" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="945" r_stop="1054" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1055" r_stop="1152" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1153" r_stop="1222" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="25976" g_stop="25753" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1223" r_stop="1447" r_length="225" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1450" polyA_stop="1465"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E745534" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1446</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30775" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACA</genome_strand>
        <mrna_strand>GCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCGCAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCGTGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E712994" ref_strand="+" ref_description="SGN-E712994 [FB06BF12]">
      <seq>ccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttatcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggattcaattgggatatactggtcacatcttttttcagcttgaaattttgatcatcttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27846" stop="25485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27546" g_stop="27452" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="246" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="356" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="454" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="524" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25976" g_stop="25785" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="717" r_length="193" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E712994" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27546" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATC-TTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTT</genome_strand>
        <mrna_strand>CCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTATCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTCAATTGGGATATACTGGTCACATCTTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E582101" ref_strand="+" ref_description="SGN-E582101 [7734]">
      <seq>gaagatctttctcactcagaggctggatgcttacttggattttgaggcagcaaattcagcattattaaaaacctatggacttgtccatattgactgtatatcaaaaatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgttgtacggagcgtgtgtttggtgtgcatcagtggcaagagctccgcacgaaactagtgacttggaggggcaacattgcaggtgttatcagcacagttcaagccaataaaattacagaagatagcacacaggcaatgcaaggttttagcactccgttgaaatgttctttgtggcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27128" stop="25587"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26828" g_stop="26752" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="0.98"/>
            <acceptor a_prob="0.729" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="187" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="285" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="355" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25976" g_stop="25870" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="464" r_length="109" r_score="0.888"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E582101" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26828" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGG-TTTAGCAATCCGCTG-AGTGTTCTTTGTGGAAAT</genome_strand>
        <mrna_strand>GAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGATTTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATATTGACTGTATATCAAAAATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGTTGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGAGCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCAGGTGTTATCAGCACAGTTCAAGCCAATAAAATTACAGAAGATAGCACACAGGCAATGCAAGGTTTTAGCACTCCGTTGAAATGTTCTTTGTGGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295580" ref_strand="+" ref_description="SGN-E295580 [cLET-23-F14]">
      <seq>tcgtctgaagatgcttctattattactgaggctaaggaagaagctgccaggagagttgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggatgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtacaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcaatggcaagatctccgcacgaaactagtgacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27841" stop="25908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27541" g_stop="27452" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="241" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="351" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="449" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26273" g_stop="26208" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="515" r_length="66" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295580" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27541" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTG</genome_strand>
        <mrna_strand>TCGTCTGAAGATGCTTCTATTATTACTGAGGCTAAGGAAGAAGCTGCCAGGAGAGTTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGATGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTACAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAATGGCAAGATCTCCGCACGAAACTAGTGACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E700019" ref_strand="+" ref_description="SGN-E700019 [FA11DE08]">
      <seq>cagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28716" stop="26174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28416" g_stop="28326" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="230" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="443" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="582" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="733" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="734" r_stop="843" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26486" g_stop="26474" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="844" r_stop="856" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E700019" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28416" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTG</genome_strand>
        <mrna_strand>CAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E708388" ref_strand="+" ref_description="SGN-E708388 [FA35CE06]">
      <seq>cgctgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31055" stop="26481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30755" g_stop="30604" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="282" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="421" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="634" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="773" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26902" g_stop="26781" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="895" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E708388" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>895</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30755" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGC</genome_strand>
        <mrna_strand>CGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709502" ref_strand="+" ref_description="SGN-E709502 [FA52BA01]">
      <seq>cctttagggtctatctcttgggaaatttcgcgggcgaggaaactgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31029" stop="26517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30738" g_stop="30604" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="265" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="404" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="617" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="756" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26902" g_stop="26817" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="842" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E709502" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30738" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCT</genome_strand>
        <mrna_strand>CCTTTAGGGTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAACTGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E726405" ref_strand="+" ref_description="SGN-E726405 [LA11CH06]">
      <seq>ccgctgcgctgcttgctgttccactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31056" stop="26536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30756" g_stop="30604" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="282" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="421" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="634" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="773" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26902" g_stop="26836" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="840" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E726405" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30756" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATC</genome_strand>
        <mrna_strand>CCGCTGCGCTGCTTGCTGTTC-CACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E326301" ref_strand="+" ref_description="SGN-E326301 [cTOC-14-E22]">
      <seq>tcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28667" stop="26558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28367" g_stop="28326" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="181" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="394" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="533" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26902" g_stop="26858" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="578" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E326301" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28367" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGAT</genome_strand>
        <mrna_strand>TCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312925" ref_strand="+" ref_description="SGN-E312925 [cTOA-8-P12]">
      <seq>atattttctaaagcttctgaaaaagatcttgagtgcgttggcacaatggtgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28650" stop="26570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28350" g_stop="28326" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="164" r_length="139" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="377" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="516" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26902" g_stop="26870" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="549" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E312925" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28350" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAG</genome_strand>
        <mrna_strand>ATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTGGCACAATGGTGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201311" ref_strand="+" ref_description="SGN-E201311 [cLEC-4-I9]">
      <seq>caacattttaaaggaaagcaaaggctctacaaaagattctttcatgtatcttacaaagaatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="27993" stop="26574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27693" g_stop="27670" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.00"/>
            <acceptor a_prob="0.524" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="163" r_length="139" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26902" g_stop="26874" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="192" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E201311" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27693" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGT</genome_strand>
        <mrna_strand>CAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTATCTTACAAAGAATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E576576" ref_strand="+" ref_description="SGN-E576576 [59816]">
      <seq>cttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcacttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatttggccactgccggaaaggttactgaacacattttgccatccatcaaaaagatggataactttttgaaggaatggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaaacaaaggctctacaaaagattctttcatgtttctaacaaagtatctggaaaccttttcgtctgaagaggcttctcatatgaacgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="30977" stop="27211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30677" g_stop="30604" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="204" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="343" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="556" r_length="213" r_score="0.958"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.524" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27511" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="636" r_length="80" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E576576" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30677" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGG</genome_strand>
        <mrna_strand>CTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCACTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTTGGCCACTGCCGGAAAGGTTACTGAACACATTTTGCCATCCATCAAAAAGATGGATAACTTTTTGAAGGAATGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAACAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTAACAAAGTATCTGGAAACCTTTTCGTCTGAAGAGGCTTCTCATATGAACGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235598" ref_strand="+" ref_description="SGN-E235598 [cLED-15-A5]">
      <seq>gattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28733" stop="27214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28433" g_stop="28326" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="247" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="460" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27590" g_stop="27514" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="537" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E235598" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28433" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTG</genome_strand>
        <mrna_strand>GATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453570" ref_strand="+" ref_description="SGN-E453570 [cSTS-20-O2]">
      <seq>ccgtcgtccgttttacggcggagacgtcatgggcggacgccggcgccgagacctgcagagcctgaagttaatagcttgtgtgtcgaggcccagaaatgcatgattgaagggaaggtggttggatttggtttcgcttatgccttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagaagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatttggccactgccggaaaggttattgaacacattttgccatccttcaaaaagatggataacttcttgaaggaatggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaaacaaaggctctacaaaagattctttcatgtttctaacaaagtatctggaaaccttttcatctgaagatgcttctaatatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="30953" stop="27217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30653" g_stop="30604" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="183" r_length="133" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="323" r_length="140" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="536" r_length="213" r_score="0.953"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.524" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27516" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="611" r_length="75" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E453570" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30653" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGA-CTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAA-GGAAGGTGGTTGGATTTGGTTTCGCTTATG-CTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAG-AGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGAC</genome_strand>
        <mrna_strand>CCGTCGTCCGTTTTACGGCGGAGACGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCAGAGCCTGAAGTTAATAGCTTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGGAAGGTGGTTGGATTTGGTTTCGCTTATGCCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTTGGCCACTGCCGGAAAGGTTATTGAACACATTTTGCCATCCTTCAAAAAGATGGATAACTTCTTGAAGGAATGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAACAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTAACAAAGTATCTGGAAACCTTTTCATCTGAAGATGCTTCTAATATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E557796" ref_strand="+" ref_description="SGN-E557796 [16652]">
      <seq>tctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatttggccactgccggaaaggttattgaacacattttgccatccttcaaaaagatggataacttcttgaaggaatggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaacggaaaacaaagggtctacaaaagattctttcatgtttctaacaaagtatctggaaaaccttttcatctgaagatgcttctaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31031" stop="27218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30731" g_stop="30604" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="258" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="397" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="611" r_length="214" r_score="0.944"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.94"/>
            <acceptor a_prob="0.524" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27518" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="685" r_length="74" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E557796" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30731" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAA-GGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGG-AAACCTTTTCGTCTGAAGATGCTTCTAATATG</genome_strand>
        <mrna_strand>TCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTTGGCCACTGCCGGAAAGGTTATTGAACACATTTTGCCATCCTTCAAAAAGATGGATAACTTCTTGAAGGAATGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAACGGAAAACAAAGG...............................................................................GTCTACAAAAGATTCTTTCATGTTTCTAACAAAGTATCTGGAAAACCTTTTCATCTGAAGATGCTTCTAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202223" ref_strand="+" ref_description="SGN-E202223 [cLEC-7-L24]">
      <seq>ttttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcacaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28647" stop="27228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28347" g_stop="28326" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="161" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="374" r_length="213" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27590" g_stop="27528" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="437" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E202223" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28347" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGC</genome_strand>
        <mrna_strand>TTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCACAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E719842" ref_strand="+" ref_description="SGN-E719842 [FC09AB06]">
      <seq>ctctccgtcgtccggtttacggcaaagatgtcatgggcggacgccggcgccgagactgcaaagcctgaagttaataaattgtgtgtcgaggcccaaaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcaaagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="30957" stop="27236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30657" g_stop="30604" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="184" r_length="130" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="323" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="536" r_length="213" r_score="0.995"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27536" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="591" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E719842" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30657" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCT</genome_strand>
        <mrna_strand>CTCTCCGTCGTCCGGTTTACGGCAAAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAAGCCTGAAGTTAATAAATTGTGTGTCGAGGCCCAAAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAAAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332738" ref_strand="+" ref_description="SGN-E332738 [cTOD-18-G4]">
      <seq>aaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgnncatctcaacattttaaaggaaaagcaaggctctacaaaagattcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31016" stop="27273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30716" g_stop="30604" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="243" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="382" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="595" r_length="213" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="0.84"/>
            <acceptor a_prob="0.524" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27573" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="613" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E332738" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30716" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCA-ATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTT</genome_strand>
        <mrna_strand>AAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGNNCATCT-CAACATTTTAAAGGAAAAGCAAGG...............................................................................CTCTACAAAAGATTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E300325" ref_strand="+" ref_description="SGN-E300325 [cLEW-17-O4]">
      <seq>tccgctgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31057" stop="27396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30757" g_stop="30604" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="284" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="423" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27696" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="610" r_length="187" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E300325" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30757" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATC</genome_strand>
        <mrna_strand>TCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E266973" ref_strand="+" ref_description="SGN-E266973 [cLEI-7-B20]">
      <seq>gcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccataaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31009" stop="27432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30709" g_stop="30604" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="236" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="375" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27732" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="526" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E266973" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30709" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTT</genome_strand>
        <mrna_strand>GCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCATAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309462" ref_strand="+" ref_description="SGN-E309462 [cTOA-2-C20]">
      <seq>tattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="28649" stop="27444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28349" g_stop="28326" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="163" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27882" g_stop="27744" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="302" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E309462" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>302</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28349" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAG</genome_strand>
        <mrna_strand>TATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E577080" ref_strand="+" ref_description="SGN-E577080 [32597]">
      <seq>gttttttcttctctcccgactaagagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaacgaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatttggccactgccggaaaggttattgaacacattttgccatccttccaaacgatggataccttcttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31088" stop="27445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30788" g_stop="30604" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="315" r_length="130" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="454" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27745" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="592" r_length="138" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E577080" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30788" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAA</genome_strand>
        <mrna_strand>GTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAACGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTTGGCCACTGCCGGAAAGGTTATTGAACACATTTTGCCATCCTTCCAAACGATGGATACCTTCTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212429" ref_strand="+" ref_description="SGN-E212429 [cLEC-74-P21]">
      <seq>tgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaagttactgaacacattttgtcgtccatcaaaatgatggataacttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31052" stop="27448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30752" g_stop="30604" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="279" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="418" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27748" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="553" r_length="135" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E212429" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30752" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTT</genome_strand>
        <mrna_strand>TGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAAGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209353" ref_strand="+" ref_description="SGN-E209353 [cLEC-53-A17]">
      <seq>tgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31040" stop="27453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30740" g_stop="30604" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="267" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="406" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27753" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="536" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E209353" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30740" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAAC</genome_strand>
        <mrna_strand>TGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E442984" ref_strand="+" ref_description="SGN-E442984 [cSTA-35-D6]">
      <seq>gagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatttggccactgccggaaaggttattgaacacattttgccatccttcaaaaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31065" stop="27460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30765" g_stop="30604" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="292" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="431" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27760" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="554" r_length="123" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E442984" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30765" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGAT</genome_strand>
        <mrna_strand>GAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTTGGCCACTGCCGGAAAGGTTATTGAACACATTTTGCCATCCTTCAAAAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438190" ref_strand="+" ref_description="SGN-E438190 [cSTA-6-B21]">
      <seq>gcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31046" stop="27511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30746" g_stop="30604" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="273" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="412" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27811" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="484" r_length="72" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E438190" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30746" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTT</genome_strand>
        <mrna_strand>GCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E445944" ref_strand="+" ref_description="SGN-E445944 [cSTA-19-K4]">
      <seq>cctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="30981" stop="27512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30681" g_stop="30604" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="208" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="347" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27812" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="418" r_length="71" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E445944" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30681" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGT</genome_strand>
        <mrna_strand>CCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E359565" ref_strand="+" ref_description="SGN-E359565 [cLPP-5-M13]">
      <seq>cgctgcgctgcttgctgttcacactctctgcctcttgggaaatttcgcgggcgaggaaaatgacgacggtggttcctacttctgaagaagatcccgtcctctccgtcgtccgatttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgtgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31055" stop="27521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30755" g_stop="30604" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="282" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="421" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27821" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="483" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E359565" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30755" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGT</genome_strand>
        <mrna_strand>CGCTGCGCTGCTTGCTGTTCACACTCTCTGCCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACGGTGGTTCCTACTTCTGAAGAAGATCCCGTCCTCTCCGTCGTCCGATTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGTGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E275998" ref_strand="+" ref_description="SGN-E275998 [cLEN-12-N20]">
      <seq>gctgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31054" stop="27547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30754" g_stop="30604" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="281" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="420" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27847" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="456" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E275998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30754" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATA</genome_strand>
        <mrna_strand>GCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E444541" ref_strand="+" ref_description="SGN-E444541 [cSTA-43-E16]">
      <seq>cgagggagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgaccgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttaccggcggagatgtcatgggcggaccccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31065" stop="27553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30772" g_stop="30604" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="299" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="438" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27853" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="468" r_length="30" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E444541" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30772" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGA-CGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTA-CGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAA</genome_strand>
        <mrna_strand>CGA--GGGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACCGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACCGGCGGAGATGTCATGGGCGGACCCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E444599" ref_strand="+" ref_description="SGN-E444599 [cSTA-43-F15]">
      <seq>gagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31065" stop="27553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30765" g_stop="30604" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="292" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="431" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27853" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="461" r_length="30" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E444599" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30765" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAA</genome_strand>
        <mrna_strand>GAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E442388" ref_strand="+" ref_description="SGN-E442388 [cSTA-33-C14]">
      <seq>ctccgctgcgctgcttgctgttcacactctctatctcttgggaaattttgcgggggaggaaaatgacgaccgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgcttgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaacctgttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31058" stop="27555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30758" g_stop="30604" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="285" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="424" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27855" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="452" r_length="28" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E442388" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30758" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAG</genome_strand>
        <mrna_strand>CTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTTGCGGGGGAGGAAAATGACGACCGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTTGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAACCTGTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318121" ref_strand="+" ref_description="SGN-E318121 [cTOA-29-B10]">
      <seq>acactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31035" stop="27643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30735" g_stop="30604" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="262" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="401" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27862" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="422" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E318121" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318121" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30735" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCT</genome_strand>
        <mrna_strand>ACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E265663" ref_strand="+" ref_description="SGN-E265663 [cLEI-14-F6]">
      <seq>gctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcacagatgtcatgggcggacgccggcgccgagactgcatagcctgaagttaatagattgtgtgtcgaggcccacaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatatcttctgaagcttctgaaaaagatcttgtgtgcgtttacacaatacatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcatagctcatatccgctaaaatcatacaacaacccattgataaacccgcattgcgcttgaaaatcttgttcaatctctacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31042" stop="27564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30742" g_stop="30604" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="269" r_length="130" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="409" r_length="140" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27864" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="428" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E265663" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30742" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATA-ATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAAT</genome_strand>
        <mrna_strand>GCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCACAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCACAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATCTTCTGAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGTGTGCGTTTACACAATACATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCATAGCTCATATCCGCTAAAATCATACAACAACCCATTGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E581833" ref_strand="+" ref_description="SGN-E581833 [7463]">
      <seq>cactctctatctctttggaaattttgcggtggatgaaaatgacgaccgttgttcctacttctgaggaagatccgtcctctccgtcgtccgttttacggcggagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccaaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaatcatgtgcaaccttgtcaagaagcctgagagcttggaccaagttcatgagatggcagagctcatatccgtaaaatcattcaacaaccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31034" stop="27565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30734" g_stop="30604" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="259" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="396" r_length="137" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27865" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="414" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E581833" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30734" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAA</genome_strand>
        <mrna_strand>CACTCTCTATCTCTTTGGAAATTTTGCGGTGGATGAAAATGACGACCGTTGTTCCTACTTCTGAGGAAGAT-CCGTCCTCTCCGTCGTCCGTTTTACGGCGGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCA-AAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATCATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTTCATGAGATGGCAGAGCTCATATCCG-TAAAATCATTCAACAA-CCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E325754" ref_strand="+" ref_description="SGN-E325754 [cTOC-15-H16]">
      <seq>acactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31035" stop="27728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30735" g_stop="30604" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="262" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="28028" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="337" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E325754" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30735" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="28028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGG</genome_strand>
        <mrna_strand>ACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E341225" ref_strand="+" ref_description="SGN-E341225 [cTOE-22-C6]">
      <seq>tctcttgggaaatttcgcgggcgaggaaaaggacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccgggttacggcaaagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgagtgtcgaggcccagaaatgcatgattgaaggaaggtggctggatttggtttcgcttatgctcgcttctgcagatataatattttataaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31025" stop="28036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30725" g_stop="30604" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28336" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="242" r_length="120" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E341225" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>242</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30725" e_stop="30604"/>
          <exon e_start="28455" e_stop="28336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCT</genome_strand>
        <mrna_strand>TCTCTTGGGAAATTTCGCGGGCGAGGAAAAGGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGGTTACGGCAAAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGAGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGCTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTATAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717780" ref_strand="+" ref_description="SGN-E717780 [FC02CH07]">
      <seq>aatcggccgaattggtctatcgcttcggactttaccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="30575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="307" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35167" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="617" r_length="310" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35166" i_stop="30921" i_length="4246">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.691" a_score="0.67"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30920" g_stop="30875" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="663" r_length="46" r_score="0.674"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E717780" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35167"/>
          <exon e_start="30920" e_stop="30875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAAGGAGGAGAAAGAA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419318" ref_strand="-" ref_description="SGN-E419318 [STM-29-K6]">
      <seq>caagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttagtttaatctgttgatgtggaaatgatatcatccttttatatttgttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36397" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36097" g_stop="36013" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35149" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="414" r_length="329" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35148" i_stop="30921" i_length="4228">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.691" a_score="0.75"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30920" g_stop="30881" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="454" r_length="40" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E419318" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419318" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="36097" e_stop="36013"/>
          <exon e_start="35476" e_stop="35149"/>
          <exon e_start="30920" e_stop="30881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAAGGAGGAG</genome_strand>
        <mrna_strand>CAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTAGTTTAATCTGTTGATGTGGAAATGATATCATCCTTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E401669" ref_strand="+" ref_description="SGN-E401669 [PPC-4-P8]">
      <seq>gagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaaaaaacacacttcttctttaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36529" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36229" g_stop="36013" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="506" r_length="289" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35187" i_stop="30910" i_length="4278">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30909" g_stop="30885" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="531" r_length="25" r_score="0.880"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E401669" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36229" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
          <exon e_start="30909" e_stop="30885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAAGGA</genome_strand>
        <mrna_strand>GAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAAAAACACACTTCTTCTTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E720324" ref_strand="+" ref_description="SGN-E720324 [FC10BH11]">
      <seq>ggcgattggcggccaatcggccgaattggtctatcgcttcggacttatccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="30575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="321" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35166" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="632" r_length="311" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35165" i_stop="30921" i_length="4245">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.691" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30920" g_stop="30888" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="665" r_length="33" r_score="0.727"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E720324" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35166"/>
          <exon e_start="30920" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E232139" ref_strand="+" ref_description="SGN-E232139 [cLEL-5-B24](-)">
      <seq>ttctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattncccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36484" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36184" g_stop="36013" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35231" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="418" r_length="246" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35230" i_stop="30908" i_length="4323">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30907" g_stop="30888" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="438" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E232139" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36184" e_stop="36013"/>
          <exon e_start="35476" e_stop="35231"/>
          <exon e_start="30907" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>TTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTNCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E215193" ref_strand="+" ref_description="SGN-E215193 [cLEL-20-E15](-)">
      <seq>gactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattctcagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccctgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36451" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36151" g_stop="36013" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35162" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="454" r_length="315" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35161" i_stop="30910" i_length="4252">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30909" g_stop="30888" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="476" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E215193" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36151" e_stop="36013"/>
          <exon e_start="35476" e_stop="35162"/>
          <exon e_start="30909" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>GACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCTCAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCCTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E215481" ref_strand="+" ref_description="SGN-E215481 [cLEL-20-E15](-)">
      <seq>acaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccctgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36359" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36059" g_stop="36013" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35162" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="362" r_length="315" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35161" i_stop="30910" i_length="4252">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30909" g_stop="30888" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="384" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E215481" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36059" e_stop="36013"/>
          <exon e_start="35476" e_stop="35162"/>
          <exon e_start="30909" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>ACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCCTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E611340" ref_strand="+" ref_description="SGN-E611340 [61090]">
      <seq>tggatcccccggcctgcaggtgatggccagaattgcggcaactttctaacagaaaggcgtcaaccaagnccaagcagcacctggtggtggatcttccttggggtattatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36345" stop="30579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36043" g_stop="36013" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="51" r_length="31" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35220" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="307" r_length="256" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35219" i_stop="34910" i_length="310">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.313" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34909" g_stop="34902" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="315" r_length="8" r_score="0.625"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34901" i_stop="30910" i_length="3992">
            <donor d_prob="0.083" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30909" g_stop="30888" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="337" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E611340" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36043" e_stop="36013"/>
          <exon e_start="35476" e_stop="35220"/>
          <exon e_start="34909" e_stop="34902"/>
          <exon e_start="30909" e_stop="30888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>TGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGT-CAACCAA-GNCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATT-ATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGT......................................................................................................................................................................................................................................................................................................................AAAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E714951" ref_strand="+" ref_description="SGN-E714951 [FB12DF08]">
      <seq>gctattttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaatgatgtcatccttttatannanaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37440" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37140" g_stop="37085" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="323" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35151" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="649" r_length="326" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35150" i_stop="30921" i_length="4230">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.691" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30920" g_stop="30889" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="680" r_length="31" r_score="0.719"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E714951" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37140" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35151"/>
          <exon e_start="30920" e_stop="30889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-ATANNANAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E232639" ref_strand="+" ref_description="SGN-E232639 [cLEL-5-B24](-)">
      <seq>attttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccatgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36353" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36053" g_stop="36013" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35232" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="286" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35231" i_stop="30910" i_length="4322">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30909" g_stop="30889" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="307" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E232639" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36053" e_stop="36013"/>
          <exon e_start="35476" e_stop="35232"/>
          <exon e_start="30909" e_stop="30889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>ATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCATGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348391" ref_strand="+" ref_description="SGN-E348391 [cTOF-27-O18]">
      <seq>aaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacaatttttctttagtttaatctgnttgatgtgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="30589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36283" g_stop="36013" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35179" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="569" r_length="298" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35178" i_stop="30921" i_length="4258">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.691" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30920" g_stop="30890" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="600" r_length="31" r_score="0.774"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E348391" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36283" e_stop="36013"/>
          <exon e_start="35476" e_stop="35179"/>
          <exon e_start="30920" e_stop="30890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATTTTACTAGCGAATGGTTGTTGGAGCCTTAGTCGTCACTAAAAATAACTCATAACCTTTAGTGGCAATATCTTGGGATGTTGTGGCAACTTTGTCGCCACTAAAAGTCAAGTTCTTTTGTAGTAAATTTTAGTTGACAACACTTTGGTGGATGGATTAGTCCTATGTGACATGCCACGTCACTAAAAAAAATTGAGTGTTAACTCTTGAGGGTATTTGTGGTCTCCTAAGAATAACGGCAGGGATATTTTTGATCCCAAAATGTAATGAAGGGTATAAGTGGTCTATTTTGCATAGTTCATGAGCAACTTAGATCCTTTTCCGATATTACTTTCTCATGCTATACATATAGTATTTTTTTTCATAACAATGAAGGTTCACACACGCTACCTTTAGGGTTTAGGGTACGAACAACATAAAATTTTCGTTTTCATACAATAGCTTGCAAATTATATAAGAGAGGTAACCCACATGCTATACATATAAAATTACTCATTCAAGATGAAATGTCCAACCTCAAGATATTCATATGAAGGGGTATCATGGTTCAATTTTGATCTGTTACTAGTTAAAATCAAAATCAGACCAATTTAAATTAATTTTAAATTTTTCTAATCCCAATCAAAAAAATAACCGTCGATTTGATTCTGTTTAGTTAGATTTTTATTATTAGAATGATTTACAAATAAGCTATTACACAAATAAAGGGATTCGTCCAATGTACCAAGATTCAGAAATTAAAAAACTTATTATTAATAGCATAAAGTTTATTTAATATTCTCGAGATCTCAACATCTTATCATTAGGTTTTTAAATAAAATTACACCTTAAGATTTTACTTATAAAAAACAACAACCAATATTTCATAGTTAAAGCCAATCAAATTACATCTTCGTTAGCTTGACCTTTAAATTATTCAATGTTATGTTATAAATTTTACAAAGAAGATAAAAACAATGAATATTGAAGAGATTTAGACTTAGGGGTCGTTTGGTACAAACATTGATAGTGCGGGGATTAGTAATGCATGGATTAGTAATACAGAGATTAGTAATGCAGGGATTATTTTTTGTCAAGTGTTTGGTTCACTACTCTCCACTTAATTTTGTGTTTAATTTATAATTCTACAAAAAAATTCTTTCCTATTATACCCTTGTGTTATTATGAGTGTTTATTTCATGTAACTAAGTCAAGGCAGATAACTACCGGATCGGATAATTTTTTTAAAGAATTATTTATTCCATTTAATTAGTTAAATCAAATACATATATATATATATATAAAATTGTTATTAATTTTAAGGTATGATGTACCACTAAGAAGATCAATGATGGCACAATGTATTTCTAATTTTTTGTGGGTTAAGTATATATCTTAAACTTAACATAGATTTAAGACTACTTAAATTGTTAATACCTAAAGCTTATTTTTATTTTTATTTTTAAAACAATAGTTCAAGTGGGTAATTGACAAATTATCTTGAATACAAAAAAAATCAAAAAAAATGGAGAAAAAAATATATTAGTAAAATCATTAAATTACACCAAACGAATTTGGAGAATTAGAAAAGAACATTTATAACCACTCTAATATAAATAAAAAGGAAATTAAATTACAAAAGAATTTTTTTAAAAAAAGAATAAAGGGTTAGTTTAGTCATTTAGGAATCTTATCCAAGGTTTAACAAATCTTGGATTAGTTATCCCTCTATGTTTAAGGGATAAGATAATACCACATATGATGGATAAGCAATCCATAGATTAAATTAAATGAAGTAACCAAGCAATGTATTAGTTGAATTAAATTTTAATCCATGGATTATTCTACTTAATACCGCCTACCAAACGGGTCCTTACAGTTTTAATAATTGGACTCAGACTTAAGTGTTGGAATTCAAAAAATAGTAAATGAAAAACTTAAGTTAATTAAAATTTATTAAAATACTTATATTTTATTTATAGATAATTATAGAATTTATATATATAACTTCTCGATTCAGTTTGGTTAAATTTGCGATTCATTATTAGTAAAATCAAAATCAAACTTAATAATATCAATTTTTTAAAATCAAACATAATCAAATCAAACTAAATATTACTTCTTTTTATCGAATTGATTGAAATTACAATTCCATTTAATTTTATAAACATAAGCATGAACCACCGAAGTTGGGGAAGAAGAATAAAGAGACACGAGCTTGTGTGACTAAAGTTACGAAATTTGTTTAGCTCATGATAGTTTTACATTTTTAAATATTTAGTAATTCCTTACTATAGATGTTGATAACACAGATATATATATAAAATTATAGTCATAATTATATGTCATTTATAAAATAGAATTATTATTTAAAAATGCGGATGTATTGCATCAAAAAAATAGTACATACAAAAAAAAGAGAGAAGATGTTGGTAACATAGGTATAACATAAATTTATAATTACAATTACATCTCAAGTCATTGATAAATAAATTTAAATACATTACAATCAAATAAATTATTACGTTAAACAAAAAAATATTTATAAAAAAGTACATATAAAAATTTAAGTTTATTATTGTTAAAATTGTAATCGAAAATGTTAAATTTTAAAGTTCATAGTGAGTTAGGAATGATTTTTTTTGTATGTTTTCTTAAAAAAGAGTTTCCATAAAAACAAAAATATTACAGAATTGTTTTACCAAAAAAAAAAAAAAAAAAA</genome_strand>
        <mrna_strand>AAAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACAATTTTTCTTTAGTTTAATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GNTTGATGTGAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E713428" ref_strand="+" ref_description="SGN-E713428 [FB08CD09]">
      <seq>gaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttannaacnanaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="30590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="281" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35202" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="556" r_length="275" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35201" i_stop="34910" i_length="292">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.313" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34909" g_stop="34902" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="564" r_length="8" r_score="0.625"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302">
            <donor d_prob="0.083" d_score="0.00"/>
            <acceptor a_prob="0.854" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33599" g_stop="33588" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="576" r_length="12" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E713428" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35202"/>
          <exon e_start="34909" e_stop="34902"/>
          <exon e_start="33599" e_stop="33588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGATT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTANNAAC....................................................................................................................................................................................................................................................................................................NANAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E711373" ref_strand="+" ref_description="SGN-E711373 [FB01DD01]">
      <seq>cattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="280" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="569" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35187" i_stop="34910" i_length="278">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.313" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34909" g_stop="34902" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="577" r_length="8" r_score="0.625"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302">
            <donor d_prob="0.083" d_score="0.00"/>
            <acceptor a_prob="0.854" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33599" g_stop="33589" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="588" r_length="11" r_score="0.727"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E711373" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
          <exon e_start="34909" e_stop="34902"/>
          <exon e_start="33599" e_stop="33589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGAT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA......................................................................................................................................................................................................................................................................................AAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E224835" ref_strand="+" ref_description="SGN-E224835 [cLEL-27-L1](-)">
      <seq>aacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacaccttttctttagtttaatctgttgatgtggaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36413" stop="30588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36113" g_stop="36013" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35167" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="411" r_length="310" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35166" i_stop="34910" i_length="257">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.313" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34909" g_stop="34902" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="419" r_length="8" r_score="0.625"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302">
            <donor d_prob="0.083" d_score="0.00"/>
            <acceptor a_prob="0.854" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33599" g_stop="33590" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="429" r_length="10" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E224835" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36113" e_stop="36013"/>
          <exon e_start="35476" e_stop="35167"/>
          <exon e_start="34909" e_stop="34902"/>
          <exon e_start="33599" e_stop="33590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAATGA</genome_strand>
        <mrna_strand>AACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACCTTTTCTTTAGTTTAATCTGTTGATGTGGAA.................................................................................................................................................................................................................................................................AAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295701" ref_strand="+" ref_description="SGN-E295701 [cLET-25-J4]">
      <seq>gagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaatttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36580" stop="23269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36280" g_stop="36013" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35179" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="566" r_length="298" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35178" i_stop="33600" i_length="1579">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.854" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33599" g_stop="33593" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="573" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295701" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36280" e_stop="36013"/>
          <exon e_start="35476" e_stop="35179"/>
          <exon e_start="33599" e_stop="33593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTTTTAAATGAAACACACAAGAGTCGAGAGCACTGGCGTACCATTTTCGGTTCTGCCTTGGCCTACGAGACAGACTCGAGAAAACCCGACACACATACTTGTCACCAAAATATTTTGATAAATGGGGTAAAAGGCTAAATTGCATTGTAACATGGGAAAATAGTCAATATTACTTCGGAAAAAGGTCAAAATTGTTCCTAAACTATTTGAAATAGATTATTTATATCCTCCATTATATTTTGAAATAAAAAATGTTGCTGCTGTTATCCTAAGAGACTACATATACCCTCAAAATTTAACACTTCGTATTTTTATTGACTTGGTAAGCCACACGGGACTAGTCTTTCCACCTAAGCACTCCCAACTAGGATTCACTATAAAAGAACTAGACCTTTAGCGGCGATAATAGTCGCCACAAAAGCTCAAAATTCGTCGCTAAAATTTTTTAACATTAAATTCTAATTTTGTGTTTTTTTCTTCATTGTTTTTAAAAAACATAAATGATATCGATTAAGTAGGAGTTTGAAGACATTGTATGGTTTATTTTTATGTTATATGTAAATGTATACAATGTACAATGATGCATTATATAGTAGAAGATGTGAATCGAGAAATAATTTTCATGATTTTTCGTAATAATATTGGGTGTTTTTAATATTGATGTTGCAAGTTATTTATTTAGAAAATTAGGTTGTAATCGAAAATTAATTGTCATTTTTTTATAGAAAAAAA</genome_strand>
        <mrna_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAATTTAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E586388" ref_strand="+" ref_description="SGN-E586388 [60443]">
      <seq>cttgcatctgtctcttaggccaaggcagaaccgaaaatgccttcgcacaagacattcatgataaagaagaagctggcgaagaaacagaggcaaaacaggcctattccttattggatccgcatgcgcactgacaacaccatccgctacaacgccaagcgcaggcactggcgccgcaccaagctcggattctaaggatacatacattttagggtcaggggcttcgagtttagattaaatttttagaattaggacttcaattttcgaattatgtgcaaagtttgcaccaaatttcactgtgatgtttgctacttaattaaaagttgaaatcatatttcgtttatcgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="33945" stop="34956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34245" g_stop="34283" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.897"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34284" i_stop="34349" i_length="66">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34350" g_stop="34655" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="344" r_length="305" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="345" polyA_stop="354"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E586388" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E586388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34245" e_stop="34283"/>
          <exon e_start="34350" e_stop="34655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGAGTCTGTCTCGTAGGCCAAGGCAGAACCGAAAATGGTACGCCAGTGCTCTCGACTCTTGTGTGTTTCATTTAAAAATTTTCTGTGTTTATTTCAATTTCAGCCTTCACACAAGACATTCATCTTAAAGAAGAAGCTGTCGAAGAAACAGAGGCAAAACAGGCCTATTTCCTTATTGGATCCGCATGGGCACTGACAACACCATCCGCTACAACGCCAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTCTAAGGATACATACATTTTAGGGCCAGGGCCTTCGAGTTTGGTTTTTATTTTTAGAATTAGGACTTCAATTTTCGATCTATGTGCAAAATTTGCATTAAGTTTCACTGTGATGTTTGCTACTTAATTAAAAGTTGATATCATATTTCGTTTATCGC</genome_strand>
        <mrna_strand>CTTGCATCTGTCTCTTAGGCCAAGGCAGAACCGAAAATG..................................................................CCTTCGCACAAGACATTCATGATAAAGAAGAAGCTGGCGAAGAAACAGAGGCAAAACAGGCCTA-TTCCTTATTGGATCCGCATGCGCACTGACAACACCATCCGCTACAACGCCAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTCTAAGGATACATACATTTTAGGGTCAGGGGCTTCGAGTTTAGATTAAATTTTTAGAATTAGGACTTCAATTTTCGAATTATGTGCAAAGTTTGCACCAAATTTCACTGTGATGTTTGCTACTTAATTAAAAGTTGAAATCATATTTCGTTTATCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E619247" ref_strand="+" ref_description="SGN-E619247 [69934]">
      <seq>tctagtctcttaggccaaggcagaaccgaaaatgccttcgcacaagacattcatgataaagaagaagctggcgaagaaacagaggcaaaacaggcctattccttattggatccgcatgcgcactgacaacaccatccgctacaacgccaagcgcaggcactggcgccgcaccaagctcggattctaaggatacatacattttagggtcaggggcttcgagtttagattaaatttttagaattaggacttcaattttcgaattatgtgcaaagtttgcaccaaatttcactgtgatgtttgctacttaattaaaagttgaaatcatatttcgtttatcgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="33951" stop="34956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34251" g_stop="34283" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34284" i_stop="34349" i_length="66">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34350" g_stop="34655" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="339" r_length="305" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="340" polyA_stop="349"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E619247" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E619247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34251" e_stop="34283"/>
          <exon e_start="34350" e_stop="34655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCT-GTCTCGTAGGCCAAGGCAGAACCGAAAATGGTACGCCAGTGCTCTCGACTCTTGTGTGTTTCATTTAAAAATTTTCTGTGTTTATTTCAATTTCAGCCTTCACACAAGACATTCATCTTAAAGAAGAAGCTGTCGAAGAAACAGAGGCAAAACAGGCCTATTTCCTTATTGGATCCGCATGGGCACTGACAACACCATCCGCTACAACGCCAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTCTAAGGATACATACATTTTAGGGCCAGGGCCTTCGAGTTTGGTTTTTATTTTTAGAATTAGGACTTCAATTTTCGATCTATGTGCAAAATTTGCATTAAGTTTCACTGTGATGTTTGCTACTTAATTAAAAGTTGATATCATATTTCGTTTATCGC</genome_strand>
        <mrna_strand>TCTAGTCTCTTAGGCCAAGGCAGAACCGAAAATG..................................................................CCTTCGCACAAGACATTCATGATAAAGAAGAAGCTGGCGAAGAAACAGAGGCAAAACAGGCCTA-TTCCTTATTGGATCCGCATGCGCACTGACAACACCATCCGCTACAACGCCAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTCTAAGGATACATACATTTTAGGGTCAGGGGCTTCGAGTTTAGATTAAATTTTTAGAATTAGGACTTCAATTTTCGAATTATGTGCAAAGTTTGCACCAAATTTCACTGTGATGTTTGCTACTTAATTAAAAGTTGAAATCATATTTCGTTTATCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E224479" ref_strand="+" ref_description="SGN-E224479 [cLEL-27-L1](-)">
      <seq>tggtggtggatctttccttgggttatttaattggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgatgatgctccaaaaaaaaaaaaaaaaaaaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35744" stop="30591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35444" g_stop="35173" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35172" i_stop="34351" i_length="822">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.838" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34350" g_stop="34322" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="302" r_length="29" r_score="0.621"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E224479" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35444" e_stop="35173"/>
          <exon e_start="34350" e_stop="34322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTGGATC-TTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGAACAACTATCCTTGCAGATGCCAAATACCATCCTTGCATAATAACAGCAATAACTAACTTTTGGTGAATGTAACAAACACACTCATCTACCCATTACGAGGAAATAGATCTCCTTAATTCGCGATCCAGAGTATCTCTCAACACAGTAAAAACGATGCTATATCTTTCATATTGTTCTTCAACGGTGCTGTTGATCATCAAACTACACTATTGCAGTATAACAAGTCACTTTGAAAGAAAAATCCTAACCGTCCTTCCTAATTCTTTTTGATACTATTAGAGTTCAGAAATAATACTCGATTACTTGCCTTATTGCCCAAGATATGTTAAAATTCCAATATATGTTGATAAACACATCCTTCAATAATGAAACATTACTGACCTTTCCGTACAAAAAAATGGTTTAATGAGTAATTCATACCGTAGTTGATAATCATGTAGCATATAACCAAAGTGAGAACGAGATAAATGCGATAAACGAAATATGATATCAACTTTTAATTAAGTAGCAAACATCACAGTGAAACTTAATGCAAATTTTGCACATAGATCGAAAATTGAAGTCCTAATTCTAAAAATAAAAACCAAACTCGAAGGCCCTGGCCCTAAAATGTATGTATCCTTAGAATCCGAGCTTGGTGCGGCGCCAGTGCCTGCGCTTGGCGTTGTAGCGGATGGTGTTGTCAGTGCCCATGCGGATCCAATAAGGAAATAGGCCTGTTTTGCCTCTGTTTCTTCGACAGCTTCTTCTTTAAGATGAATGTCTTGTGTGAAGGCTGAAATTGAAATAAACACAGAAAATTT</genome_strand>
        <mrna_strand>TGGTGGTGGATCTTTCCTTGGGTTATTTAATTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGATGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAAAAAAAAAAAAAAAAAAAAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E606765" ref_strand="+" ref_description="SGN-E606765 [22716]">
      <seq>ctcgcttcgaaattgataccaaagagaaattaatcagtaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattacccattatttccgtatcatgggagtaaaaaacacacttctttagtttaatatgttgatgtggaaatgatatcatccttttatatttgttcatattacaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="291" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35125" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="639" r_length="348" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E606765" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E606765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGA</genome_strand>
        <mrna_strand>AGAAATTAATCAGTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCCGTATCATGGGAGTAAAAAACACAC---TTCTTTAGTTTAATATGTTGATGTGGAAATGATATCATCCTTTTATATTTG-TTCATATTACAAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E579217" ref_strand="+" ref_description="SGN-E579217 [86343]">
      <seq>tggtggatcttccttggggtattatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattacccattatttccgtatcatgggagtaaaaaacacacttctttagtttaatatgttgatgtggaaatgatatcatccttttatatttgttcataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35741" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35441" g_stop="35126" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E579217" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35441" e_stop="35126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTG</genome_strand>
        <mrna_strand>TGGTGGATCTTCCTTGGGGTA-TTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCCGTATCATGGGAGTAAAAAACACAC---TTCTTTAGTTTAATATGTTGATGTGGAAATGATATCATCCTTTTATATTTG-TTCATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E402428" ref_strand="+" ref_description="SGN-E402428 [PPC-7-P11]">
      <seq>gggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaaaaaacacacttcttctttagtttaatctgttggtgtggaaatgatatcatccttttatatttgttcataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36559" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36259" g_stop="36013" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35127" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="596" r_length="349" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E402428" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36259" e_stop="36013"/>
          <exon e_start="35476" e_stop="35127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTT</genome_strand>
        <mrna_strand>GGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAAAAACACACTTCTTCTTTAGTTTAATCTGTTGGTGTGGAAATGATATCATCCTTTTATATTTG-TTCATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E462667" ref_strand="+" ref_description="SGN-E462667 [cPRO-12-I12]">
      <seq>gcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaaaaaacacacttcttctttagtttaatctgttggtgtggaaatgatatcatccttttatatttgttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36554" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36254" g_stop="36013" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35129" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="590" r_length="348" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E462667" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E462667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36254" e_stop="36013"/>
          <exon e_start="35476" e_stop="35129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAG</genome_strand>
        <mrna_strand>GCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAAAAACACACTTCTTCTTTAGTTTAATCTGTTGGTGTGGAAATGATATCATCCTTTTATATTTGTTCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E463465" ref_strand="+" ref_description="SGN-E463465 [cPRO-14-P21]">
      <seq>aaattaatcagtaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattacccattatttccgtatcatgggagtaaaaaacacacttctttagtttaatatgttgatgtggaaatgatatcatccttttatatttgttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36577" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36277" g_stop="36013" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35130" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="608" r_length="343" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E463465" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36277" e_stop="36013"/>
          <exon e_start="35476" e_stop="35130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTA</genome_strand>
        <mrna_strand>AAATTAATCAGTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCCGTATCATGGGAGTAAAAAACACAC---TTCTTTAGTTTAATATGTTGATGTGGAAATGATATCATCCTTTTATATTTG-TTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348814" ref_strand="+" ref_description="SGN-E348814 [cTOF-29-F15]">
      <seq>tccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaatgatgtcatcctttttatatttgtttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36454" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36154" g_stop="36013" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35130" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="490" r_length="348" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E348814" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36154" e_stop="36013"/>
          <exon e_start="35476" e_stop="35130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCC-TTTTATATTTGTTTCATATTAAGTA</genome_strand>
        <mrna_strand>TCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTTATATTTGTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E463060" ref_strand="+" ref_description="SGN-E463060 [cPRO-13-B13]">
      <seq>tcggaattgataccaaagagaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttagtttaatctgttgatgtggaaatgatatcatccttttatatttgttcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36589" stop="34833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="284" r_length="266" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35132" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="630" r_length="346" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E463060" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35132"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAG</genome_strand>
        <mrna_strand>AGAA-TTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTAGTTTAATCTGTTGATGTGGAAATGATATCATCCTTTTATATTTGTTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E464453" ref_strand="+" ref_description="SGN-E464453 [cPRO-18-E9]">
      <seq>cctctcctctgtctctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaaaaaacacacttcttctttagtttaatctgttggtgtggaaatgatatcatccttttatatttgttcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="305" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35137" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="644" r_length="339" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E464453" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAAAAACACACTTCTTCTTTAGTTTAATCTGTTGGTGTGGAAATGATATCATCCTTTTATATTTG-TTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419317" ref_strand="+" ref_description="SGN-E419317 [STM-29-K6]">
      <seq>cggaattgataccaaagagaaataatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttagtttaatctgttgatgtggaaatgatatcatccttttatattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="283" r_length="266" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35143" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="618" r_length="335" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E419317" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35143"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGT</genome_strand>
        <mrna_strand>AGAAA-TAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTAGTTTAATCTGTTGATGTGGAAATGATATCATCCTTTTATATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E567872" ref_strand="+" ref_description="SGN-E567872 [12066]">
      <seq>acgaggcaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttcctgtggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagcgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttaatttaatctgttgatgtggaaatgatatcatcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="278" r_length="267" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35151" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="605" r_length="327" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E567872" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTGTGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGCGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTAATTTAATCTGTTGATGTGGAAATGATATCATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278230" ref_strand="+" ref_description="SGN-E278230 [cLER-9-K17]">
      <seq>ggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcgggcactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttcttttagtttaatctggtgatgtggaaatgatgtcattcctttaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="282" r_length="267" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35151" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="609" r_length="327" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="610" polyA_stop="623"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E278230" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTC-TTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGGCACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTTAGTTTAATCTGGTGATGTGGAAATGATGTCATTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E292959" ref_strand="+" ref_description="SGN-E292959 [cLET-12-A3]">
      <seq>agtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaatgatgtcatccttttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35668" stop="34848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35368" g_stop="35151" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="219" polyA_stop="230"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E292959" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>218</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35368" e_stop="35151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT</genome_strand>
        <mrna_strand>AGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310750" ref_strand="+" ref_description="SGN-E310750 [cLEZ-15-F7]">
      <seq>ttttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctctaatttaatctgttgatgtggaaatgatgtcatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37436" stop="34854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37136" g_stop="37085" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="319" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35154" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="642" r_length="323" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E310750" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37136" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCT</genome_strand>
        <mrna_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTCTAATTTAATCTGTTGATGTGGAAATGATGTCATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312465" ref_strand="+" ref_description="SGN-E312465 [cLEZ-20-O8]">
      <seq>agagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctggtgatgtggaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36281" g_stop="36013" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35157" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="589" r_length="320" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E312465" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36281" e_stop="36013"/>
          <exon e_start="35476" e_stop="35157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCAT</genome_strand>
        <mrna_strand>AGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGGTGATGTGGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295124" ref_strand="+" ref_description="SGN-E295124 [cLET-20-G20]">
      <seq>agaaattaatcgttaaggatgttccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35158" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="586" r_length="319" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295124" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGTTCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E218749" ref_strand="+" ref_description="SGN-E218749 [cLEL-18-G10](-)">
      <seq>ctgtctcaaggccagctgctgctgcacaacctgtggataacaccaaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcgacaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36440" stop="34866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36140" g_stop="36013" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35162" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="444" r_length="315" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E218749" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36140" e_stop="36013"/>
          <exon e_start="35476" e_stop="35162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACC-AAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGAT</genome_strand>
        <mrna_strand>CTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGACAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344572" ref_strand="+" ref_description="SGN-E344572 [cTOF-14-I5]">
      <seq>atcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactntttctttagtttaatctgttgatgtggaaatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36571" stop="34863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36271" g_stop="36013" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35164" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="572" r_length="313" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="573" polyA_stop="583"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E344572" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36271" e_stop="36013"/>
          <exon e_start="35476" e_stop="35164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATG</genome_strand>
        <mrna_strand>ATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTNTTTCTTTAGTTTAATCTGTTGATGTGGAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E223851" ref_strand="+" ref_description="SGN-E223851 [cLEL-19-A1](-)">
      <seq>ggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36381" stop="34866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36081" g_stop="36013" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35164" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="382" r_length="313" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E223851" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36081" e_stop="36013"/>
          <exon e_start="35476" e_stop="35164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATG</genome_strand>
        <mrna_strand>GGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E291203" ref_strand="+" ref_description="SGN-E291203 [cLET-2-I19]">
      <seq>agaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcaaactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtggaaaaaaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35167" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="577" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="578" polyA_stop="588"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E291203" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAAACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E224263" ref_strand="+" ref_description="SGN-E224263 [cLEL-19-A1](-)">
      <seq>cagcaagtgatgtcgctggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttggtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcacactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35702" stop="34868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35402" g_stop="35168" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E224263" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>235</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35402" e_stop="35168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGA</genome_strand>
        <mrna_strand>CAGCAAGTGATGTCGCTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTGGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCACACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E304239" ref_strand="+" ref_description="SGN-E304239 [cLEX-6-B22]">
      <seq>ttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaatctgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37402" stop="34873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37102" g_stop="37085" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="285" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35173" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="589" r_length="304" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E304239" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37102" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGAT</genome_strand>
        <mrna_strand>TTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E308502" ref_strand="+" ref_description="SGN-E308502 [cLEY-21-D1]">
      <seq>ttataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcanagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="278" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35174" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="581" r_length="303" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E308502" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCANAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317551" ref_strand="+" ref_description="SGN-E317551 [cTOB-17-I21]">
      <seq>ggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="282" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35174" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="585" r_length="303" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E317551" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E433796" ref_strand="-" ref_description="SGN-E433796 [STM-59-C7]">
      <seq>aaaaaaaaaaaaaaaaaaannaactcgagactagttctcattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaacttttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaagagaacacacttcttctttagttaaaatagatttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="319" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35176" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="622" r_length="303" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E433796" ref_strand="-">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E433796" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAAC-TTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTA-AAAACACACTTTTTCTTTAGTTTAATCTGTT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAGAGAACACACTTCTTCTTTAGTTAAAATAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278726" ref_strand="+" ref_description="SGN-E278726 [cLER-2-K19]">
      <seq>ggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="282" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35176" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="583" r_length="301" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E278726" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E319214" ref_strand="+" ref_description="SGN-E319214 [cTOB-16-J24]">
      <seq>caaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaataactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="272" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35180" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="569" r_length="297" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E319214" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATC</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAATAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282831" ref_strand="+" ref_description="SGN-E282831 [cLER-15-M4]">
      <seq>taaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctattgtagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacacttttttctttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36566" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36266" g_stop="36013" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35180" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="552" r_length="298" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E282831" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36266" e_stop="36013"/>
          <exon e_start="35476" e_stop="35180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACAC-TTTTTCTTTAGTTTAATC</genome_strand>
        <mrna_strand>TAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATTGTAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTTCTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E217168" ref_strand="+" ref_description="SGN-E217168 [cLEL-1-O8](-)">
      <seq>ttttttttttttttttttaaagaaanagtgtgtttttaactcgcatgatacagaaataatgggtaatacagcattcagcacttacatagcagtttgaatccagtgtcaattagacactattacaattgtgaaaagaagtttcaaatttgcagtaaacgaaatccattcatactttcaacataactgggaaagcaaacttttgaaacttgatgtccagtgacatcacttgctggccttgagacaggctcattagtcggagccttttcctggttgcgagcagtctgagaattgttagcaggctctccacttccaaacaggtagcccaaggaactctgaccgcccccagcactcactccacggcccatccttaaccaagtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="34888" stop="36570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35181" g_stop="35399" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="229" r_length="219" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35400" i_stop="36125" i_length="726">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36126" g_stop="36276" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="380" r_length="151" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="10" polyA_stop="1"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E217168" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35181" e_stop="35399"/>
          <exon e_start="36126" e_stop="36276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAACTAAAGAAAAAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTGCTGCTGCCGTCACCAAATAAATAACCCAAGGAAGATCCACCACCAGGTGCTGCTTGGACCTTGGTTGAACGCCTTTCCTGCAATTATTCCAGGACAAAGATTGGTATCACTTAACTCTTTAAGCAAGCCAAAAAGGTGCTGATATTTATAATATTCTTCCATTGGAAGAAAATCAAAGCCTCAACGCAAACTGGTCATGCCTATTGAGGCATACGAAGTTACGAGGTTTGAGAAGTTGAGTATTATGATCTCAAAACAAGAGTTCTGTTAGGAAAGAAAGGAACCAATGATAGAAGAATGGTTTCAAAATTAAGAAAGGCCGTGTGTGTGTTTAGTATAGCAGATTGTAGAATATATAATTAAGTAAATGAATGTGTGATCTCTTTTAACAACTTGAGCTTTTTGATATCCAATAAAATACCAAAGCAGCAAAAAGAGAACCTGGGCATTCAATTCTCGCGGTAACCCATTGTCAAATAAGATATTCATGTGTTTAAGCTTTTAGATGAAATGATTACGCAAATCAACATAATACAAGTTTGCAAACCTTAAAAGCACTCCAAAGTTCAAAAGAATGGCAGCAGGAATCATAACAAGTTGCTAGCTAACATACCGTTAGAAAGTTGCCGCAGTTCTGGCCATCAGCACGAAAATAGTTGTTTGTGTTGTTACTGTGAATGCCTGCTGGTACATTCTTGGTGTTATCCACAGGTTGTGCAGCAGCAGCTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAATT</genome_strand>
        <mrna_strand>TTTTTTTTAAAGAAANAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCACGGCCCATCCTTAACCAAGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E311461" ref_strand="+" ref_description="SGN-E311461 [cLEZ-18-M2]">
      <seq>aaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36283" g_stop="36013" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35182" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="566" r_length="295" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E311461" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36283" e_stop="36013"/>
          <exon e_start="35476" e_stop="35182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAA</genome_strand>
        <mrna_strand>AAAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E713750" ref_strand="+" ref_description="SGN-E713750 [FB09CB11]">
      <seq>gctattttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaanaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37440" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37140" g_stop="37085" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="323" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="617" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="618" polyA_stop="633"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E713750" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37140" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716298" ref_strand="+" ref_description="SGN-E716298 [FB16CF09]">
      <seq>cccctcctctgtctatcgcttcggaattatacccaagagaaattactcgttaaggatgggccgcggagtgagtgctgggggcggtcacagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcatccatgaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccacgaatgtactcagcaggcattcacagtaacaacactgacaactattttcgtgctgatggccaaaactgcggcaactttctaccggaaaggcgttctaccaaggtccaagcaccacctgggggtggatcttccttgggttatttatttggtgacggcagcatcaagtgatgtcgctggacatcaagtttctgaagtttgctttcccagttatgttgaacgtatgaatggatttcgtttactgcaaatttgaaacttcttttctcaattgtaatagtgtctaattgacgctggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37421" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37121" g_stop="37085" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="305" r_length="268" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="599" r_length="294" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="600" polyA_stop="609"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E716298" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37121" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTAC-CAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>CCCCTCCTCTGTCTATCGCTTCGGAATTATACCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTACTCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCACAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCATCCATGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCACGAATGTACTCAGCAGGCATTCACAGTAACAACACTGACAACTATTTTCGTGCTGATGGCCAAAACTGCGGCAACTTTCTACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCTACCAAGGTCCAAGCACCACCTGGGGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCATCAAGTGATGTCGCTGGACATCAAGTTTCTGAAGTTTGCTTTCCCAGTTATGTTGAACGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCTCAATTGTAATAGTGTCTAATTGACGCTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E720699" ref_strand="+" ref_description="SGN-E720699 [FC11CC11]">
      <seq>ggccgaattggtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37411" stop="30558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37121" g_stop="37085" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.811"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="304" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="598" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="599" polyA_stop="648"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E720699" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37121" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>GGCCGAATTGGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E328322" ref_strand="+" ref_description="SGN-E328322 [cTOC-21-E9]">
      <seq>tctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37410" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37110" g_stop="37085" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="293" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="587" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="588" polyA_stop="597"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E328322" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37110" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>TCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E289999" ref_strand="+" ref_description="SGN-E289999 [cLET-5-A9]">
      <seq>gagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36580" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36280" g_stop="36013" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="562" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="573"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E289999" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36280" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E298799" ref_strand="+" ref_description="SGN-E298799 [cLET-44-E18]">
      <seq>tcggaattataccaaatagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcatagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactggcaaatttgaaaccttcttttcacaattgtaatagatgtctaattgacactggattcaaactgctatgtaagcgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="284" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="581" r_length="297" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="582" polyA_stop="597"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E298799" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACT-GCAAATTTGAAA-CTTCTTTTCACAATTGTAATAG-TGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCATAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGGCAAATTTGAAACCTTCTTTTCACAATTGTAATAGATGTCTAATTGACACTGGATTCAAACTGCTATGTAAGCGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716700" ref_strand="+" ref_description="SGN-E716700 [FB17DB10]">
      <seq>cgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36555" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36255" g_stop="36013" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35183" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="537" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="538" polyA_stop="551"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E716700" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36255" e_stop="36013"/>
          <exon e_start="35476" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>CGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E340391" ref_strand="+" ref_description="SGN-E340391 [cTOF-2-H24]">
      <seq>agcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35750" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35450" g_stop="35183" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="269" polyA_stop="278"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E340391" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>268</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35450" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>AGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342719" ref_strand="+" ref_description="SGN-E342719 [cTOF-7-C17]">
      <seq>agcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttagtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35750" stop="34882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35450" g_stop="35183" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="269" polyA_stop="278"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E342719" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>268</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35450" e_stop="35183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</genome_strand>
        <mrna_strand>AGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344894" ref_strand="+" ref_description="SGN-E344894 [cTOF-21-N5]">
      <seq>cccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37423" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37123" g_stop="37085" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="306" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="595" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E344894" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37123" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>CCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E714258" ref_strand="+" ref_description="SGN-E714258 [FB10DG08]">
      <seq>gcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37404" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37104" g_stop="37085" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="287" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="576" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="577" polyA_stop="590"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E714258" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37104" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>GCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344198" ref_strand="+" ref_description="SGN-E344198 [cTOF-16-L7]">
      <seq>aagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36282" g_stop="36013" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="559" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="560" polyA_stop="569"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E344198" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36282" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348697" ref_strand="+" ref_description="SGN-E348697 [cTOF-30-H10]">
      <seq>aagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36282" g_stop="36013" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="559" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E348697" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36282" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E715364" ref_strand="+" ref_description="SGN-E715364 [FB14AC08]">
      <seq>gagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36580" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36280" g_stop="36013" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="557" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="558" polyA_stop="568"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E715364" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36280" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E455720" ref_strand="+" ref_description="SGN-E455720 [cSTS-27-I19]">
      <seq>ccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggcctacctgtttggaagtggagaagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcattcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="275" r_length="269" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="565" r_length="290" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="566" polyA_stop="575"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E455720" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGG-CTACCTGTTTGGAAGTGGAG-AGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCCTACCTGTTTGGAAGTGGAGAAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCATTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E571617" ref_strand="+" ref_description="SGN-E571617 [15094]">
      <seq>cttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctgtgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="287" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="577" r_length="290" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="578" polyA_stop="592"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E571617" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTGTGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716289" ref_strand="+" ref_description="SGN-E716289 [FB16CE11]">
      <seq>agatattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttnnnaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="556" r_length="289" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="559" polyA_stop="573"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E716289" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AGATATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331466" ref_strand="+" ref_description="SGN-E331466 [cTOD-9-C11]">
      <seq>caaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="272" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="561" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E331466" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717162" ref_strand="+" ref_description="SGN-E717162 [FB19BC01]">
      <seq>ataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="276" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="565" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="566" polyA_stop="582"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E717162" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349896" ref_strand="+" ref_description="SGN-E349896 [cTOS-3-I9]">
      <seq>tcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36532" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36232" g_stop="36013" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="509" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="510" polyA_stop="526"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E349896" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36232" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>TCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E247516" ref_strand="+" ref_description="SGN-E247516 [cLEF-42-O13]">
      <seq>tccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36525" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36225" g_stop="36013" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="502" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E247516" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36225" e_stop="36013"/>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>TCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E216479" ref_strand="+" ref_description="SGN-E216479 [cLEL-1-O8](-)">
      <seq>gcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36496" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36196" g_stop="36126" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36125" i_stop="35400" i_length="726">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35399" g_stop="35188" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="283" r_length="212" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="284" polyA_stop="299"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E216479" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36196" e_stop="36126"/>
          <exon e_start="35399" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>GCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E391875" ref_strand="+" ref_description="SGN-E391875 [TUS-24-I19](-)">
      <seq>ggcaactttttaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35782" stop="34888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35476" g_stop="35188" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="304" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E391875" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35476" e_stop="35188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</genome_strand>
        <mrna_strand>GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E292763" ref_strand="+" ref_description="SGN-E292763 [cLET-11-H16]">
      <seq>agaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35189" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="555" r_length="288" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E292763" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310855" ref_strand="+" ref_description="SGN-E310855 [cLEZ-15-F11]">
      <seq>agaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacacactttttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35189" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="555" r_length="288" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E310855" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E579167" ref_strand="+" ref_description="SGN-E579167 [86292]">
      <seq>ctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaacacacttcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="291" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35190" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="579" r_length="288" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E579167" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAG-TAAAAACACACTTCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E290669" ref_strand="+" ref_description="SGN-E290669 [cLET-10-I5]">
      <seq>caaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacananaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="272" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35191" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="558" r_length="286" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E290669" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACANANAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E345795" ref_strand="+" ref_description="SGN-E345795 [cTOF-18-B17]">
      <seq>tcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37406" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37106" g_stop="37085" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="289" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35192" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="574" r_length="285" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E345795" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37106" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTC</genome_strand>
        <mrna_strand>TCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E343200" ref_strand="+" ref_description="SGN-E343200 [cTOF-17-B10]">
      <seq>tcgcttcggaatataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="288" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35192" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="573" r_length="285" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E343200" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTC</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548432" ref_strand="+" ref_description="SGN-E548432 [TUS-61-C9]">
      <seq>cgcttcggattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacgganaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcnaagtttcaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattcccattatttctgtatcatgcgagttaaaaacaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="287" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35193" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="570" r_length="283" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E548432" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATC-AAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GANAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCNAAGTTTC-AAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATT-CCCATTATTTCTGTATCATGCGAGTTAAAAACAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342192" ref_strand="+" ref_description="SGN-E342192 [cTOF-10-F22]">
      <seq>gaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36578" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36278" g_stop="36013" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35193" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="550" r_length="284" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E342192" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36278" e_stop="36013"/>
          <exon e_start="35476" e_stop="35193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTT</genome_strand>
        <mrna_strand>GAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E301257" ref_strand="+" ref_description="SGN-E301257 [cLEW-24-B17]">
      <seq>tctgtctatcgcttcggaattataccaaggagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcacagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaatgtccaagcagcacctggtggaggatcttccttgggttattgatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccaggtatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggatacctactgctatgtaagtgctgaatgctgtattacccattatttctgtgtcatgcgagttaaaaacacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37414" stop="34898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37114" g_stop="37085" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="297" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35198" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="576" r_length="279" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E301257" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37114" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACAC</genome_strand>
        <mrna_strand>TCTGTCTATCGCTTCGGAATTATACCAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCACAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAATGTCCAAGCAGCACCTGGTGGAGGATCTTCCTTGGGTTATTGATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGGTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATACCTACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTGTCATGCGAGTTAAAAACACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E311305" ref_strand="+" ref_description="SGN-E311305 [cLEZ-18-C21]">
      <seq>tcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgaagtgctgaatgctgtattacccattatttctgtatcattcgagttaaaaacacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37406" stop="34898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37106" g_stop="37085" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="289" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35198" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="567" r_length="278" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E311305" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37106" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACAC</genome_strand>
        <mrna_strand>TCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATG-AAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATTCGAGTTAAAAACACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E311285" ref_strand="+" ref_description="SGN-E311285 [cLEZ-16-J14]">
      <seq>gtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36533" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36233" g_stop="36013" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35198" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="500" r_length="279" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E311285" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36233" e_stop="36013"/>
          <exon e_start="35476" e_stop="35198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACAC</genome_strand>
        <mrna_strand>GTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E477347" ref_strand="+" ref_description="SGN-E477347 [cSTB-47-P6]">
      <seq>ccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactggcaaatttggaacttttttcacaattgtnatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatggggagtaaaaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="273" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35199" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="551" r_length="278" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E477347" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACT-GCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGGCAAATTTGGAACTT-TTTTCACAATTGTNATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGGAGTAAAAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E224785" ref_strand="+" ref_description="SGN-E224785 [cLEL-27-O19](-)">
      <seq>tgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatctctgtatcatgcgagttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36512" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36212" g_stop="36013" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35199" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="478" r_length="278" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E224785" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36212" e_stop="36013"/>
          <exon e_start="35476" e_stop="35199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACA</genome_strand>
        <mrna_strand>TGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATCTCTGTATCATGCGAGTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E575456" ref_strand="+" ref_description="SGN-E575456 [35083]">
      <seq>gaaaaggcccaactaatgagcctgcctcaacgccaggtaatgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaangtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtaacaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36462" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36162" g_stop="36013" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35199" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="429" r_length="280" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E575456" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36162" e_stop="36013"/>
          <exon e_start="35476" e_stop="35199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGTTAAAAACACA</genome_strand>
        <mrna_strand>GAAAAGGC-CCAACTAATGAGCCTGCCTCAACGCCAGGTAATGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAANGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTAACAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E224565" ref_strand="+" ref_description="SGN-E224565 [cLEL-27-O19](-)">
      <seq>ctccgactaatgagcctgtctcaaggccagctgctgctgcacaaccctgtggataacacccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcaaacgagttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36455" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36155" g_stop="36013" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35199" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="423" r_length="278" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E224565" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36155" e_stop="36013"/>
          <exon e_start="35476" e_stop="35199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAA-CCTGTGGATAACA-CCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACA</genome_strand>
        <mrna_strand>CTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCCTGTGGATAACACCCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCAAACGAGTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E611910" ref_strand="+" ref_description="SGN-E611910 [61667]">
      <seq>caggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattacccattatttccgtatcatgggagtaaaaaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36383" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36083" g_stop="36013" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35199" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="349" r_length="278" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E611910" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36083" e_stop="36013"/>
          <exon e_start="35476" e_stop="35199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACA</genome_strand>
        <mrna_strand>CAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCCGTATCATGGGAGTAAAAAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746287" ref_strand="+" ref_description="SGN-E746287 [GI|47104767]">
      <seq>cagattttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgccatgtaagtgctgaatgctgtattacccattatttctgtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37437" stop="30593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37140" g_stop="37085" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="323" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35201" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="599" r_length="276" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E746287" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37140" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</genome_strand>
        <mrna_strand>CAGATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCCATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309582" ref_strand="+" ref_description="SGN-E309582 [cLEY-26-M5]">
      <seq>ttttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37436" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37136" g_stop="37085" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="319" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35201" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="595" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="596" polyA_stop="605"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E309582" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37136" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</genome_strand>
        <mrna_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E347618" ref_strand="+" ref_description="SGN-E347618 [cTOF-26-H9]">
      <seq>tcgcttcggaattataccaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37406" stop="34901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37106" g_stop="37085" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="288" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35201" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="564" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E347618" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37106" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</genome_strand>
        <mrna_strand>TCGCTTCGGAATTATACC-AAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540722" ref_strand="+" ref_description="SGN-E540722 [TUS-61-C9](-)">
      <seq>cgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacaaaaaaaaaaaaaaaaactcgaggggggcccgtacccaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37405" stop="30592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37105" g_stop="37085" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="288" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35201" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="564" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="565" polyA_stop="581"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E540722" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37105" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</genome_strand>
        <mrna_strand>CGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E220350" ref_strand="+" ref_description="SGN-E220350 [cLEL-12-K17](-)">
      <seq>acggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcaacagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgttatctgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgcatgctgtattacccattatttctgtaaataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35777" stop="34919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35476" g_stop="35201" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="278" r_length="275" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E220350" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>276</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35476" e_stop="35201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACA</genome_strand>
        <mrna_strand>GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAACAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTATCTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGCATGCTGTATTACCCATTATTTCTGTA-AATAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E712813" ref_strand="+" ref_description="SGN-E712813 [FB05DE12]">
      <seq>gtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaaccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37411" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37111" g_stop="37085" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="294" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35202" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="569" r_length="275" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="571" polyA_stop="581"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E712813" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37111" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC</genome_strand>
        <mrna_strand>GTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E734319" ref_strand="+" ref_description="SGN-E734319 [LB12BD10]">
      <seq>atcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaacnanaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37407" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37107" g_stop="37085" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="290" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35202" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="565" r_length="275" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="567" polyA_stop="581"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E734319" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37107" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC</genome_strand>
        <mrna_strand>ATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E220198" ref_strand="+" ref_description="SGN-E220198 [cLEL-12-K17](-)">
      <seq>gctgatggccagaactgcgtgcaactttctagcggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36345" stop="34919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36045" g_stop="36013" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35202" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="309" r_length="275" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E220198" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36045" e_stop="36013"/>
          <exon e_start="35476" e_stop="35202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGATGGCCAGAACTGCG-GCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC</genome_strand>
        <mrna_strand>GCTGATGGCCAGAACTGCGTGCAACTTTCTAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E471694" ref_strand="+" ref_description="SGN-E471694 [cSTB-24-N14]">
      <seq>ctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatgggagtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="291" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35203" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="565" r_length="274" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="566" polyA_stop="577"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E471694" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGGAGTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E215368" ref_strand="+" ref_description="SGN-E215368 [cLEL-20-C3](-)">
      <seq>gcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36442" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36142" g_stop="36013" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35203" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="404" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="405" polyA_stop="416"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E215368" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36142" e_stop="36013"/>
          <exon e_start="35476" e_stop="35203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAA</genome_strand>
        <mrna_strand>GCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E215272" ref_strand="+" ref_description="SGN-E215272 [cLEL-20-C3](-)">
      <seq>gtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtatcatgcgagttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36347" stop="34899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36047" g_stop="36013" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35203" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="309" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="310" polyA_stop="321"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E215272" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36047" e_stop="36013"/>
          <exon e_start="35476" e_stop="35203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAA</genome_strand>
        <mrna_strand>GTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310944" ref_strand="+" ref_description="SGN-E310944 [cLEZ-17-D10]">
      <seq>attaatcgtttaggatgggccgcggagtgagtgctgggggcggtcaaagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36575" stop="34919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36275" g_stop="36013" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35205" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="535" r_length="272" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E310944" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36275" e_stop="36013"/>
          <exon e_start="35476" e_stop="35205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAA</genome_strand>
        <mrna_strand>ATTAATCGTTTAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAAAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540729" ref_strand="+" ref_description="SGN-E540729 [TUS-61-C13](-)">
      <seq>cgcttcggaattataccaaagagaaattaatcgttaaggatgggccccggagtgagtgctgggggcggtcagagttcccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttatgtatcatgcgagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37405" stop="34908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37105" g_stop="37085" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="289" r_length="268" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35208" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="558" r_length="269" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E540729" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37105" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTT-CCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTT</genome_strand>
        <mrna_strand>CGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCCCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTATGTATCATGCGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560037" ref_strand="+" ref_description="SGN-E560037 [19628]">
      <seq>ggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattctcagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcatgggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="283" r_length="267" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35209" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="553" r_length="270" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E560037" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCATGCGAGT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCTCAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCATGGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E734476" ref_strand="+" ref_description="SGN-E734476 [LB12DB01]">
      <seq>cattttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37437" stop="34919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37138" g_stop="37085" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="321" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35210" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="588" r_length="267" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E734476" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37138" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAG</genome_strand>
        <mrna_strand>CATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540731" ref_strand="+" ref_description="SGN-E540731 [TUS-61-C13]">
      <seq>ggatcccccgggctgcaggcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctggcggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagttccaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgcttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactggctatgtaagtgctgaatgctgtattacccattatttctgaatcatgcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37405" stop="34910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37125" g_stop="37085" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.756"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.76"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="307" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35210" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="575" r_length="268" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E540731" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37125" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACT-GCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAG</genome_strand>
        <mrna_strand>GGATCCCCCGGGCTG-CAGGCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGCGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTCCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGCTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGAATCATGCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E567529" ref_strand="+" ref_description="SGN-E567529 [11668]">
      <seq>tctgtctctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgcggaatgctgtattacccattatttctgtatcatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="298" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35212" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="563" r_length="265" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E567529" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCG</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCGGAATGCTGTATTACCCATTATTTCTGTATCATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E605285" ref_strand="+" ref_description="SGN-E605285 [21202]">
      <seq>ccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacagcctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtattttacccattatttctgtatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="273" r_length="267" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35215" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="537" r_length="264" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E605285" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTA--TTACCCATTATTTCTGTATCAT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAGCCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTTTACCCATTATTTCTGTATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E566939" ref_strand="+" ref_description="SGN-E566939 [10986]">
      <seq>aatcggcacgaggctcgcttcgaaattgatacaaagagaaattaatcagtaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgcctatgtaagtgctgaatgctgtattacccattatttccgtatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="303" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35215" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="566" r_length="263" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E566939" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E566939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTG-CTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCAT</genome_strand>
        <mrna_strand>AGAAATTAATCAGTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCCGTATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716966" ref_strand="+" ref_description="SGN-E716966 [FB18CC02]">
      <seq>tgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37412" stop="34919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37112" g_stop="37085" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="295" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35220" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="552" r_length="257" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="553" polyA_stop="564"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E716966" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37112" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGT</genome_strand>
        <mrna_strand>TGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E311720" ref_strand="+" ref_description="SGN-E311720 [cLEZ-9-C15]">
      <seq>agaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattatttctgtcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="34920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35220" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="524" r_length="257" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E311720" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244166" ref_strand="+" ref_description="SGN-E244166 [cLEE-1-F19]">
      <seq>ctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggaggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagaatgaatggatatcgcttactgcaaatatgaaacttcttttcacaattgtaatagtgtctaatagacagtggattcaaactgctatgtaagtgctgaatgctgtattacccattatgtctcgtgcaatgagttgtgatgttcaaatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36440" stop="34920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36140" g_stop="36013" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35222" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="383" r_length="255" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E244166" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36140" e_stop="36013"/>
          <exon e_start="35476" e_stop="35222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCT</genome_strand>
        <mrna_strand>CTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGAGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGAATGAATGGATATCGCTTACTGCAAATATGAAACTTCTTTTCACAATTGTAATAGTGTCTAATAGACAGTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E294550" ref_strand="+" ref_description="SGN-E294550 [cLET-22-K20]">
      <seq>ccaaagagaaattaatcgttaaagatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaagtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccattaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="273" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35228" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="522" r_length="249" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="523" polyA_stop="536"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E294550" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAAGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAAGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E712491" ref_strand="+" ref_description="SGN-E712491 [FB05AA08]">
      <seq>cggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttcttttcacaattgtaatagtgtctaattgacactggattcaaactgctatgtaagtgctgaatgctgtattacccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37400" stop="34930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37100" g_stop="37085" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="283" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35231" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="529" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="530" polyA_stop="540"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E712491" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37100" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCC</genome_strand>
        <mrna_strand>CGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E589527" ref_strand="+" ref_description="SGN-E589527 [43103]">
      <seq>ctctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaagtgctgaatgctgtatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="293" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35235" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="535" r_length="242" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E589527" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E614322" ref_strand="+" ref_description="SGN-E614322 [64107]">
      <seq>tgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgacacaggattcaaactgctatgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="278" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35252" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="503" r_length="225" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E614322" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACACAGGATTCAAACTGCTATGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282182" ref_strand="+" ref_description="SGN-E282182 [cLES-4-J6]">
      <seq>atcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggatttcgtttactgcaaatttgaaacttctttttacaattgtaatagtgtctaattgacactggattcaaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36571" stop="34959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36271" g_stop="36013" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35259" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="477" r_length="218" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E282182" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36271" e_stop="36013"/>
          <exon e_start="35476" e_stop="35259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGC</genome_strand>
        <mrna_strand>ATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTTACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E587386" ref_strand="+" ref_description="SGN-E587386 [78502]">
      <seq>aactattttcgtgctgatggccagaattgcggcaactttctaaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatatgtctaattgacacagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36357" stop="34969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36057" g_stop="36013" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.91"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35269" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="253" r_length="207" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E587386" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>253</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36057" e_stop="36013"/>
          <exon e_start="35476" e_stop="35269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCT-AACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGA</genome_strand>
        <mrna_strand>AACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATA-TGTCTAATTGACACAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E443863" ref_strand="+" ref_description="SGN-E443863 [cSTA-40-G22]">
      <seq>cggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcccagttatgttggaagtatgaatggatttcgttaactgcaaatttgcaactttttttcacaattgtaatagtgtctaattgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="284" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35274" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="487" r_length="203" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E443863" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACA</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGGAAGTATGAATGGATTTCGTTAACTGCAAATTTGCAACTTTTTTTCACAATTGTAATAGTGTCTAATTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E413102" ref_strand="+" ref_description="SGN-E413102 [STM-17-I8]">
      <seq>ctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtacaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcctagttatgttggaagtatgaatggatttcgtttactgcaaatttggaactttttttcacaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="34992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="291" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35292" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="476" r_length="185" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E413102" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGT</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTACAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCTAGTTATGTTGGAAGTATGAATGGATTTCGTTTACTGCAAATTTGGAACTTTTTTTCACAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E443976" ref_strand="+" ref_description="SGN-E443976 [cSTA-40-N24]">
      <seq>tgcggaattgattcctaagagaaattgggggattaatgatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaagtccaagcagcaccctggggggggatcttccttggggtatttatttggtgatggcagcagcaagtgattttcactggacatcaacgttcaaaagttttgctttcccagttatgttggaagaatgaatggattttcgtaactgcaaaatttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36567" stop="35026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="287" r_length="268" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35310" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="458" r_length="171" r_score="0.862"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E443976" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCG-TTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCA-CCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGA-TGTCACTGGACATCAAGTTTCAAAAG-TTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGC-AAATTTGAA</genome_strand>
        <mrna_strand>AGAAATTGGGGGATTAATGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAAGTCCAAGCAGCACCCTGGGGGGGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTTCACTGGACATCAACGTTCAAAAGTTTTGCTTTCCCAGTTATGTTGGAAGAATGAATGGATTTTCGTAACTGCAAAATTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E280948" ref_strand="+" ref_description="SGN-E280948 [cLER-7-G3]">
      <seq>agaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaagtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctttcccagttatgttgaaagtatgaatggattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="35029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35329" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="415" r_length="148" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E280948" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTT</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAAGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E476003" ref_strand="+" ref_description="SGN-E476003 [cSTB-43-C7]">
      <seq>ctctgtctctcgcttcgaaattgataccaaagagaaattaatcagtaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggaggatcttccttggggtatttatttggtgatggcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctgtcccagttatgttgaaagtatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="35035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="299" r_length="267" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35335" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="441" r_length="142" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E476003" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAAT</genome_strand>
        <mrna_strand>AGAAATTAATCAGTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGAGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTGTCCCAGTTATGTTGAAAGTATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E391641" ref_strand="+" ref_description="SGN-E391641 [TUS-24-I19]">
      <seq>ttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatcaagtttcaaaattttgctttcccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36526" stop="35054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36226" g_stop="36013" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35354" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="337" r_length="123" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E391641" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36226" e_stop="36013"/>
          <exon e_start="35476" e_stop="35354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAG</genome_strand>
        <mrna_strand>TTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAATTTTGCTTTCCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438854" ref_strand="+" ref_description="SGN-E438854 [cSTA-9-N18]">
      <seq>gagagagagaactagtctctcgcttcggaattgataccaaagagaaattaatcattaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccaactaatgagcctgcctcaaagccagctgctgttgcacaacctgtggatagcaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaattgcggcaactttctaacagaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttggggtatttatttggtgatggcagcagcaagtgatttcactggacatcaagtttcaaaagtttgctttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="35057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="309" r_length="267" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35357" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="429" r_length="120" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E438854" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCC</genome_strand>
        <mrna_strand>AGAAATTAATCATTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCAACTAATGAGCCTGCCTCAAAGCCAGCTGCTGTTGCACAACCTGTGGATAGCACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAATTGCGGCAACTTTCTAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGGTATTTATTTGGTGATGGCAGCAGCAAGTGATTTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295358" ref_strand="+" ref_description="SGN-E295358 [cLET-23-E14]">
      <seq>gagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgactgcagcagcaagtgatgtcactggacatcaagtttcaaaagtttgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36580" stop="35060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36280" g_stop="36013" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35360" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="385" r_length="117" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295358" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36280" e_stop="36013"/>
          <exon e_start="35476" e_stop="35360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTT</genome_strand>
        <mrna_strand>GAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACTGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295100" ref_strand="+" ref_description="SGN-E295100 [cLET-40-O21]">
      <seq>agaaattaatcgttaaagatgggccgtggagtgagtgctgcgggcggtcaaagttccttgggctacctgtttggaagtggagagcctgctaacaattttcagactgctctcaaccaggaaaaggctcctactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccatcaggcgttcacagtaacaacacatacaactattttcgtgctgatggccacaactgcggcaactttctaacggaaaggcgttcaaccaaagtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacattaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36579" stop="35076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35376" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="368" r_length="101" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E295100" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAG</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAAGATGGGCCGTGGAGTGAGTGCTGCGGGCGGTCAAAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTTTCAGACTGCTCTCAACCAGGAAAAGGCTCCTACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCATCAGGCGTTCACAGTAACAACACATACAACTATTTTCGTGCTGATGGCCACAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAAGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284689" ref_strand="+" ref_description="SGN-E284689 [cLES-3-B1]">
      <seq>ttttccccaccggcccccctcctctgtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37436" stop="35079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37136" g_stop="37085" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="319" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35379" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="417" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E284689" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37136" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATC</genome_strand>
        <mrna_strand>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E289482" ref_strand="+" ref_description="SGN-E289482 [cLET-3-P24]">
      <seq>tgagagagagaggtctatcgcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaaggtccaagcagcacctggtggtggatcttccttgggttatttatttggtgacggcagcagcaagtgatgtcactggaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37411" stop="35081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37111" g_stop="37085" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="39" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36013" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="306" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35476" g_stop="35381" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="402" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E289482" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37111" e_stop="37085"/>
          <exon e_start="36279" e_stop="36013"/>
          <exon e_start="35476" e_stop="35381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTATCGCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACA</genome_strand>
        <mrna_strand>GTCTATCGCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318781" ref_strand="+" ref_description="SGN-E318781 [cTOB-11-B3]">
      <seq>atgggccgcggagtgagtgctgggggcgggtagatttactggggctacctgattggaagtggagagcctgctcacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactatttttgtgctgatggccagaactgcggctactttctaacggaaaggcgttcaaccaaggttcaagcagcacctggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36561" stop="35140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36261" g_stop="36013" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35476" g_stop="35440" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="286" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E318781" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36261" e_stop="36013"/>
          <exon e_start="35476" e_stop="35440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACGGTATGTTAGCTAGCAACTTGTTATGATTCCTGCTGCCATTCTTTTGAACTTTGGAGTGCTTTTAAGGTTTGCAAACTTGTATTATGTTGATTTGCGTAATCATTTCATCTAAAAGCTTAAACACATGAATATCTTATTTGACAATGGGTTACCGCGAGAATTGAATGCCCAGGTTCTCTTTTTGCTGCTTTGGTATTTTATTGGATATCAAAAAGCTCAAGTTGTTAAAAGAGATCACACATTCATTTACTTAATTATATATTCTACAATCTGCTATACTAAACACACACACGGCCTTTCTTAATTTTGAAACCATTCTTCTATCATTGGTTCCTTTCTTTCCTAACAGAACTCTTGTTTTGAGATCATAATACTCAACTTCTCAAACCTCGTAACTTCGTATGCCTCAATAGGCATGACCAGTTTGCGTTGAGGCTTTGATTTTCTTCCAATGGAAGAATATTATAAATATCAGCACCTTTTTGGCTTGCTTAAAGAGTTAAGTGATACCAATCTTTGTCCTGGAATAATTGCAGGAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTG</genome_strand>
        <mrna_strand>ATGGGCCGCGGAGTGAGTGCTGGGGGCGGGTAGATTTACTGGGGCTACCTGATTGGAAGTGGAGAGCCTGCTCACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTTGTGCTGATGGCCAGAACTGCGGCTACTTTCTAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGCGTTCAACCAAGGTTCAAGCAGCACCTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E293179" ref_strand="+" ref_description="SGN-E293179 [cLET-12-N14]">
      <seq>agcctgctaacaagttctcagactgctcgcaaccaggaaaaggcttcgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctgatggccagaactgcggcaactttctaacggaaaggcgttcaaccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36497" stop="35708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36197" g_stop="36013" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E293179" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>185</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36197" e_stop="36013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTGCTAACAA-TTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG</genome_strand>
        <mrna_strand>AGCCTGCTAACAAGTTCTCAGACTGCTCGCAACCAGGAAAAGGCTTCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E280237" ref_strand="+" ref_description="SGN-E280237 [cLEL-7-H16](-)">
      <seq>tcagcacgaaaatagttgtttgtgttgttactgtgaatgcctgctggtacattcttggtgttatccacaggttgtgcagcagcagctggccttgagacaggctcattagtcggagccttttcctggttgcgagcagtctgagaattgttagcaggctctccacttccaaacagttagcccaaggaactctgacagcccccagcactcactccgcggcccatccttaacgattaattctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="35741" stop="36583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36041" g_stop="36283" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-E280237" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>243</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36041" e_stop="36283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCACGAAAATAGTTGTTTGTGTTGTTACTGTGAATGCCTGCTGGTACATTCTTGGTGTTATCCACAGGTTGTGCAGCAGCAGCTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAATTTCTCTGC</genome_strand>
        <mrna_strand>TCAGCACGAAAATAGTTGTTTGTGTTGTTACTGTGAATGCCTGCTGGTACATTCTTGGTGTTATCCACAGGTTGTGCAGCAGCAGCTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGTTAGCCCAAGGAACTCTGACAGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAATTCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E289864" ref_strand="+" ref_description="SGN-E289864 [cLET-9-L4]">
      <seq>tataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcaaagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccagctgctgctgcacaacctgtggataacaccaagaatgtaccagcaggcattcacagtaacaacacaaacaactattttcgtgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="36581" stop="35741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36279" g_stop="36041" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="249" r_length="239" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E289864" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36279" e_stop="36041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGA</genome_strand>
        <mrna_strand>AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAAAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E293855" ref_strand="+" ref_description="SGN-E293855 [cLET-37-K18]">
      <seq>gcttcggaattataccaaagagaaattaatcgttaaggatgggccgcggagtgagtgctgggggcggtcagagttccttgggctacctgtttggaagtggagagcctgctaacaattctcagactgctcgcaaccaggaaaaggctccgactaatgagcctgtctcaaggccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="37404" stop="35826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37104" g_stop="37085" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36279" g_stop="36126" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="174" r_length="154" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E293855" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>174</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37104" e_stop="37085"/>
          <exon e_start="36279" e_stop="36126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCGGAATTATACCAAAGGTATGGATTTGCTCTCTTCTTCAAGCTTTTTGATTTTCTGGTTGATGTGACTTTCTGTTTAATCTGAGTTTATTTTAAAATTTTGATTTCATATGTCGATGTGAATTGTTGTTTTTTAGATCTTGTGCTTGTTTAATGGGAAAATGATTAGTTTGAGAATGCTGGATTTTGGTTAGTATGATTTTTATCCTCTGCTTATCTCATTTTAGCATATTGAGCCCTTTTCAAGAGTCAGATTTACAGTTCTCTCAGTGGATCTGTAGTGTTCTGTTTTGTGTTGAGTGATTTCCAATTTAAAGGATGTGATTTGCGATCCCTAGTCTCTTGAGGTCTGTGGAGGCTAGTATGTACGTAACCTGATTCCTACCTTGTGCGAACCCTAGTCCCTTGGATGTGCAAAATTAAGAAGTGGAGCTTGAACTTGTTCTTGGAGTGAACAGGATTTGGATAATGTAGTATGTTATGTGGATTTGTTTGATCTTTGGTTGAGAATGTTAGTTGCGTACAGTGGAGTTATGAAGCACCGCACCCTGTAGAACGTGATATTAAAAGCTGGTTTTGAAATTGGAGTAAAAGATTGTGCAGGTGTTAAAGAACATTTAGCTTATTGATCTCTGAAAACGAAGATGATTGTTAACAATGGAGTATGAGTTTGTTTAGAGATGTTATTGTGTAGTTGAGCTGAGCACAGTTGTGTGTGCCTGTCAATGTTTATTGAATGAAATTGCTAACTATTTTAAAAAATAATGTTGAATTGTTTTATTTTACAGTTCAATTAACATGCCTTGCTTGATTTTTTTTGCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAG</genome_strand>
        <mrna_strand>GCTTCGGAATTATACCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E726451" ref_strand="+" ref_description="SGN-E726451 [LA11DD07]">
      <seq>ccattgcacttttagaagaagctggatttaaagttactgcagttgatttaaccggttcaggcattcattctttcgacacaaatagcatcgcaagcctatcgcaatatgtacagccgctcactgattttcttgagaagcttgctgatggagaaaaggtgattttggtgggacatgattttggcggtgcctgtatatcctttgcgatggagcgccatccccttaaggtttcgaaagctgtgtttgttgctgctgcaatgctcactagtggacaaagtgcccttgatatgttctcacaaaagacagattcaaatgaccttatgagacagtctcaaatatttatttatgccaatgggaacgacaagcctccaactgctattgatttggacaagtcactcctcagggacttgttattcaaccatagtcctgctaaggatgttgcattagcatctgtgtcaatgaggccaattcccttttccccagttttggagaagctttgtctatccgactccaagtatggttgtgttaggcggttttatgtagaaacgacagaagataatgcgataccaaaagccttacagcagaatctaattagcaataatcctccagaacaagtttttcatctcaagggtgctgatcactcgccttttttctccaagcctcaaggtctacataggatactggtagagatctccaggattccataaacttggaagttgttttgctgaattccttattattagaaaagtcacaccgacacaaatgtagcaaagttattgttgtgtaaattaaccatgtggaatgcctattggtgtacatgttcggtttatccaattactttgttccatttgctatacttgagacagtgagaaattcccttactcgggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="45061" stop="41168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44761" g_stop="44607" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44606" i_stop="43773" i_length="834">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43772" g_stop="43629" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="299" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43628" i_stop="42658" i_length="971">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.649" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42657" g_stop="42526" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="431" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42525" i_stop="41925" i_length="601">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41924" g_stop="41468" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="888" r_length="457" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E726451" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>888</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44761" e_stop="44607"/>
          <exon e_start="43772" e_stop="43629"/>
          <exon e_start="42657" e_stop="42526"/>
          <exon e_start="41924" e_stop="41468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAGGTTAGTTCTGTATCATTTCTAGCATTCTGTTTCCCACTGAATCCACTATTATATCTTGCATTCTTTTGGAAATTCAGAGCTTTAAAGAAAACCACTTGCTTCTAATTCTTGGGCACTAGTGGAGATTGTCTGGTGGAGTTTTTATAAGAATTGAGTATATTAAAAAAAGAGTGATTTGTAGGAACTTTTTATTCTTTGCCAAGTTAGCTGTTCCAAAACTCCGGTACCTGCAAAAGCGCATTCTTTTCCATTATCTGTTGTGATTGAGAGAAGACCATGCTCATTTTTGCTGTAAGAGGCGGTATTCAGTACAAACAGCCTTCTTCCATTCCTTCTCCTCAAATGAGGTCTTATAGAAGGATAAGCATTCACATCTCTTTGAAGCAAAACTTCACTGTTTCAACATGATTCATCTTAAATTAAACTAAATACAAGTGACCCAGAGTGCGAAATCAGGAAACAGGGGAACAAGATGGAAAAGGTCATATCATCAATAATCATAGGAACTTTCTGTATGATTTAACTTAAAGTACTCTGTCCCTAGCCAAGTCTTTGTTGCATTAGGTAGGTGAAGATCAGCAATTCATGATAAAACAGAAAGGAAAAGTTTTCTTACATCGGATTAATCTATTTTGTTATGCTCATTGGGCAAGTTAATTAGTCGCAAAGTGAGGCTTGGATATATTACTTCATGATACTTTTAGATATGAATACTGAGTTTTGTGAATCTCCAAATCCCAACCTAACTACAGTGGGAAGTCCTTATCACCCTTCATAACTATGTTTGCTCTGCCGTTGTTGAATTAAAGTTGGAATATTTCTTTAAACATGTAGGTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAGGTAAAAGTTGGTCATTTTGATCAACTACTTTCAATTGGTTCTTTTGAAATCTGCACTGCACACCCAATTTGACCTTTGTCCGTGTAAGTTTATGTTACATGTCTCCTTTGGTTATTGAGCTCATTGATCATTTATTCAGGTGATCTACACTTATCCCTTATCTTAGTTTGTGATCAGATAATCTCTGGCAGATGTAGAAGTAGTTTTCTCTTGTGAATATTTGGGGCAGGGCTATGACAGTTGAAACTACATGATACAGATGTTGATTTCACTGTTCCTCTAGAGACCAATTAATGGCTCTTGGAGCTCTTGCTTTAAAGTCAATCTCATTTTTACATGGGTTACTATGTTTCAGTAAGCATCGGCATCAGTGCTTCATCATTGAGGACATAGATGCCATGATATACTCATGGACAAATTTAAACTTAAGCCTTGAAGATTAGGGATGTCACTGCTGTGCAGTTTTTCTGTGACATGCTTCAAGGAATCCACTATTCATCATGATAAACCACTAGAACACATGCTATATGTTTCAGGTGAAGGAGTGAACTATGTGCTCCTGTATAGTTTCTCCAGGAACTGTCTGTAGTTTTTAGGAAAACTTGTGAATGAATCATCTCTGGTTTCATGGAGAAACTTTGCTTATTGAAATGAGATCTAGAATATTTGATGAAAATTGTCCCAAAATCTGTCTCTGGCAAGGTAATAAAGAAAAAGAGAGAGAGAGAGAGAGAGGGAGAGAGATATTGAAGGTGACTTACCTCACGCTAACTTTTACAGTCCCTCTCGAAATTGGGTTGACAAAATTCTTGATACTGCATTTGGTATTGTAATTCTAGAATGAAGTGAATTAGAATTTAAAAGGATCCCTTAGTATCTGGAGTTGTGGTGGTTGAAGCTCTTAAGCTGCTTGTTTGACTAATTGAGTTTTAAGTTCCCCTGTTGTTAACAAAAGTTCATATTCATTGCAGACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAGGTATGTTGTCTTTGAGTTATAGATGAAGTATTTAATGTTTCATAAAATCGCAAAATCTACTTTTTCAGCTCTTCCGTTGATGCTAAAATGGACTCTTCCAAGTAGTACTTTTATTTTCTAATCTAAAACATAACTTGTGAAAATCTTTGTAATTTCCGTTACTGGTCAAGAGCACTACAAGTTGGGAGTCGGGAGAAAATGTTAGGGAACCAATATGGGTTAGCAACATATTTCTTTTGGGGCAGATGTCAATGGTGCTTACAAGTTGAATATATGGGCTCCTGAGTGTGGTATATGTGACTCCACATTAGTAGGTTAGTTATCCTGTGACATTGCCTGAGAGCACAGTTAAATTGAGAGTCTTATCTAATTCCTAACCTGGCTCCTATATCTTGACATTAATTGTTGATCATTCAGTGGATACCCTAAACCTGTAATATGTCTTGCTAATTGTTGGTTTATTAGAAGGTAAGGGAAAGATGTAAATTGATTTTCTTTATGTGGGTTTTAAAATGGGTAAATTTTTTCTGTACTAGTATATAGCTGTGGGGAAATTGCCATTTGTCAAACTCTCTCTTCTTACCATTTAAGTTGTGTGCAGGATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAATTCCCTTTACTCGGGAAAA</genome_strand>
        <mrna_strand>CCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAAATTCCCTTACTCGGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E204294" ref_strand="+" ref_description="SGN-E204294 [cLEC-13-P2]">
      <seq>attgctaaccatcttcatctctctcaactctcaactgctttgggaaagcatcaaatacttgtacgtatacgtaattcttattgtacatatctctgtaaatctgttgcatgtgaatatcaatcaatcagaaatgggcatgtgtttatcacggagttccggccccgtgaagaagcggcaatccaaacgtttaacgaatcaatcggcggccgccgttaatggcggtgggagcaacaggtggtctaggaatcgatcgtctaagagagacgattccatcattcaggagcgagctctcgccgccgcgattctcctacagcagcaaatgcaaaacggcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="47082" stop="46150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46782" g_stop="46450" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E204294" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204294" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46782" e_stop="46450"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGG</genome_strand>
        <mrna_strand>ATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E214878" ref_strand="+" ref_description="SGN-E214878 [cLEC-78-G2]">
      <seq>ggtattgctaaccatcttcatctctctcaactctcaactgctttgggaaagcatcaaatacttgtacgtatacgtaattcttattgtacatatctctgtaaatctgttgcatgtgaatatcaatcaatcagaaatgggcatgtgtttatcacggagttccggccccgtgaagaagcggcaatccaaacgtttaacgaatcaatcggcggccgccgttaatggcggtgggagcaacaggtggtctaagaatcgatcgtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="47085" stop="46226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46785" g_stop="46526" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E214878" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>260</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46785" e_stop="46526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTA</genome_strand>
        <mrna_strand>GGTATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAAGAATCGATCGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E542896" ref_strand="+" ref_description="SGN-E542896 [TUS-64-G23](-)">
      <seq>atcatcatattgaaggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacagagtggaaaagattcaaaggaatgaggataaatataacacagctactaattttggggagcagcataattgatggattgattggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacatcaacaagaaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcaaaaaaaaaaaaaaaaaaggaaaaaaaaaactcgagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70175" stop="30570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69875" g_stop="69807" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="113" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66922" i_length="1980">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66921" g_stop="66841" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="194" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66840" i_stop="66591" i_length="250">
            <donor d_prob="0.855" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="374" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="437" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="65193" i_stop="65010" i_length="184">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65009" g_stop="64963" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="484" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="63105" g_stop="62851" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="739" r_length="255" r_score="0.996"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="62850" i_stop="62747" i_length="104">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="62746" g_stop="62709" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="776" r_length="37" r_score="0.553"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E542896" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69875" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66921" e_stop="66841"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65009" e_stop="64963"/>
          <exon e_start="63105" e_stop="62851"/>
          <exon e_start="62746" e_stop="62709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTAGCTTATCTCTTTATTATAGAAGCAAATCTTTGGTTGGTATTTCGTGTACACATGCTTGGATTAGTTTCTATGTGGAAATAGTTGCTTGAAAATCTAAATAAAATGAAAAGACACTTCTATTATCTG</genome_strand>
        <mrna_strand>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTG..........................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT........................................................................................................................................................................................CAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCAA........................................................................................................AAAAAAAAAAAAAAAAGGAAAAAAAAAACT-CGAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392899" ref_strand="+" ref_description="SGN-E392899 [TUS-37-A5](-)">
      <seq>aggagaatttgatttgggccacaatgcatctaaacaggttcaacaaataaatgcaggcattaattcaattgatgtggacctgttagaatttcttcaacaggagaccaactactgtttcttttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttttgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70162" stop="62535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69862" g_stop="69807" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="0.88"/>
            <acceptor a_prob="0.796" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="100" r_length="44" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="280" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="343" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="383" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62835" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="654" r_length="271" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392899" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69862" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>AGGAGAATTTGATTTGGGCCACAATGCATCTAAACAGGTTCAACAAATAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTTAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTTTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTTTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242538" ref_strand="+" ref_description="SGN-E242538 [cLED-30-B21]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70161" stop="62535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69861" g_stop="69807" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62835" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="653" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E242538" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69861" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E368179" ref_strand="+" ref_description="SGN-E368179 [TUS-22-M22](-)">
      <seq>gatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70152" stop="62535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69852" g_stop="69807" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="90" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="270" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="333" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="373" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62835" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="644" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E368179" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69852" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>GATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E368180" ref_strand="+" ref_description="SGN-E368180 [TUS-22-M22]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactttgttccttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70161" stop="62536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69861" g_stop="69807" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62838" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="650" r_length="268" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E368180" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69861" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCT</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTTTGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392900" ref_strand="+" ref_description="SGN-E392900 [TUS-37-A5]">
      <seq>aggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacatttgcaataacatttcttttcctaaatgtactactgttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70162" stop="62619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69862" g_stop="69807" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="100" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="280" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="343" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="383" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62919" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="571" r_length="188" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392900" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69862" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACA-TTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAAT</genome_strand>
        <mrna_strand>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTTGCAATAACATTTCTTTTCCTAAATGTACTACTGTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242932" ref_strand="+" ref_description="SGN-E242932 [cLED-31-F17]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70161" stop="62641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69861" g_stop="69807" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62941" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="547" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E242932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69861" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTT</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244714" ref_strand="+" ref_description="SGN-E244714 [cLED-38-O6]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcacgtgctggaatactctctgatttactgccatctgtagctattttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70161" stop="62708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69861" g_stop="69807" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="63008" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="480" r_length="98" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E244714" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69861" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="63008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAG</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCACGTGCTGGAATACTCTCTGATTTACTGCCATCTGTAGCTATTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E240191" ref_strand="+" ref_description="SGN-E240191 [cLED-25-O21]">
      <seq>ggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70161" stop="64663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69861" g_stop="69807" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="99" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="279" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="342" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="382" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E240191" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69861" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG</genome_strand>
        <mrna_strand>GGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E692867" ref_strand="+" ref_description="SGN-E692867 [LH_Ea09N09]">
      <seq>ttctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgggattgttcgtgatgtgccacttatgccagaaactacagcgataaggagactgcagcattctgcagaagctatctgctcggagcttccacatcaatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagctatcatctggaataacaaattgcaagctcaaaggggagtgtacaagtacacacaatggggattcaaaagaagaatatgcacaagcaaaaactcaaagttacttagttctgggacaaaatttgagaattagcaccaaaaatgattttgagatattcttttttgttcctttgtctttattttcattttgtgttgggataataacccggatatggatagagtggaaaagattcaaaagaatgaggattaatatagcaggcctactaattttgggtgagtagcataattgatggactgattgctgctgatgttgccattctatttatttaaagtttttatttcgttggtgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80710" stop="66494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80411" g_stop="80197" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="429" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="70601" i_length="9191">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="0.445" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70600" g_stop="70318" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="716" r_length="287" r_score="0.809"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E692867" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80411" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="70600" e_stop="70318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCTAGCAAATATTATACAGTATACATAATAATGGATTATACAAATAAAAGTAAAATCATTAATGAAATACAATTAGATAAACGTTATATAATTGAAGATTTTATTTTAAATTATACATAAATATTAACTACGATGCTCCCATAAATGTTCTATTAATGCATTACGTAGTTTAAAATGAGCTTCTTGTCCTTCATTTTTTTTATATCGAGCTAAAAATTATTGAAATTGATAATTTTCGTCTATTGTCATTTCTACAGTCGGTGCTGGACCTTTCGATACATCTTGAATTGATGCATTAAGATCACGCACATTCTCAATTGTATTATTTTTAAAAAAATTTGTATGTTTGTATTTTTAATTTTATGAGGGTAAATTGTAGTTTATATAACTAATATATAGTATATTAACACAAATTTAATTTTTTAAAAAAGTCATATAAAGAAAAATTAATTTATAAAAAGCTAAATTTTATATCTAAATTAATATTATAAAAATATTCCATTGAAAATGATTAAATATACAAAAAAATATAATTAAAACATACAATTTATATAACGTTTAATTAAAAGTTTGTGTAGTGAAATAATATTATAATATTTAAAAAGTTATTTGGTGTGAAAATTAGTGCAGGTTAGAGCTTAAAACACCAAATTTCACACTAAATAAAATAATTAGTGTAGAATTTGGTGTTGGGTTGGAGATGGTCTTAGTCTAGCTAATGTGGAACTATCAAAATTTCTACAACAGTGTAGTCCATTGACACTTACAAGTACTCATATTTCACCTCATTGAATTAACTCTAATATTTCTCGTGTGAAATCTTGCTTATGTTCTTACTTAATTGTCATGTCATGTTCTCTGACTAAACTCCCCTTCTTTTTTTTTTTTGGTTACTTTATTGTTTTAATTAACTTCGATTTATTGCCCATATGTAGCTATTTTAGTAGTTTATTGTAGAGATTCTTTATATGTGTGCTTTATGGAGTTTACATTGCAATTATATCTCGTAATGTTAGCATACAACTTTCAAATTTCTATAATTTATTTTTCACTTTTTAATACTTATGGATGCTATTATGTTTGGTGTTAATTCAATATTATTACACAAAAATCTTATTTGTATAGATATTCTTGTGACTTGGACATTTTCTTTTATAGTGCAATCTCGTTGATAATTAAATGAGATGTTAATTGATAATTAGTAATTGTATGGAGCAACTAAAGTTATGGAAGTTTTGGTCTATTATTTATTTGAATTTAAGACTAATCTTTTCATTCTTATGTCTTTTCTCATCCTCCTTCAATGTTATTATGCAAAATTTCTAATGATTTTAGAATCTCGTACTTTGTGAATTATATTTTGTTTATTTATATATTAAGATATTTTTTTGTGCCGTTATATCTACTTTTCGGTGTATTTGAGATAATTAAGAATTTATTTTAACATTTAAAATAATTGTATTGTTACTTTGCTAAGTACGAGTCATGTTGACTTTGTGGCAGTTAAATGAAAATAACATGGATATTTTCTAGTTTAAGTGAAACAAAGTAATATGAATATGTTAAAAGTTTAAAATAAGATTTTATGGTCATAAGAGATGGATGTATTTAATTTTTGCTGTTTAGGATTAAAATTTTGAATTATAAATTTTGTAATCTAAATAGATATGTGAATATTGCATCTTTCTTCTTGCGATAGAAGTTAAACTCAGCTCTGACAGCTAATTATGTTCTTCCCATCCATAGTGACTGCAAGTTTACTTTTTATTGTATTTGAAAAATGAAGTATTCGCAAACTTTTTTTTTATTGTATTTTAAGGAGGAATAAGACCAAAAAAATGAGAATTAATGACGAGAAGAATATAGTTAGGGTCAATTTGGAAAGTCACTTGGTAATTGAAATTGGTGTAATTAATTACACTTACCTGTTTGGTTGCCACATTGTAATTACACTAAAATTACACATGTCGTGTTTGAATGTCAAAATGTAATAACACATGTTCTGTTTGTATGCATAAACGCAATCACAAAATTATGATAAATTTTAAAAATAAGAATTAATTATTTAAAATTTATACTAGACAAATAAGAAACTTTATAAATGACATTAAATTAAATAGTTAAGATATATATTCTTTTTTGAAAATATATTAATGAATAAACATATTTTCCGTAACTAATATTATGAAAAAATAATTGATTTATATTTTTAAAATTAATATCTTTCAATTGAATTGATCGTAACAACTAAAAATATGAAGTTTTCACGAACATCGTGAAATGCATGTTTGATAATAAGAATAATATATAAATAAAATGTCATAAATTATTAAATGTTTGACAAAAATGTTATCTATCAAGTCTAATTAAAAAAAATATTGTGCAATGTAAATTCAATATCTACTAAACAAATGAAACTGAAAATATGGCATAGCAAAATTTTGAACATAATACTCTTATAACAAATTTCAACATAGCAATAAATATGATTTATTCTTATTTTTCTTAGTTAAGAAAACGTAAGTCTATAAATTCTATTTTAATTAAAAATTAAAATACTAATAAAATCATGCTAATGAGAATATAAACATGGCAGATAGAAATAGATAATACGAAAAAAATTACATAAATACACGTAAAGTAAAGTTGAAAATAAGAAGAAAATAAAATATATAATAATGTAAAATAATAAATAAACTTTTACAAATTTTTAGAATAATAATAATAAAAAAAATTAAAATAATAGAAGCAAAGAAAATTAAAATAAAAATTGAAATAAAAAAATTAAAAAGTAATCAAGTGGTAATTACACCATGCAATATTAGAAATTCACCGCCTCTGCGGTTGAATTATAGAGTATAATCACCTCTGTCACTGACCAAGTAATTAAATATCCTTTCAAACAGGACAAAACAATTTAATTATATCAAATCTAATTACCAATATATCCTTCCAAACAGGTCCTAAGTTTTTGTTAAAATAGGCTTACTATCACTGAACAACTTGAAAATTAACTAATTTAAGTTAGTATATGATAACAATTTTCATATTATAAATGGAATAGTTATTTTTTAATTATTATTGTTATAATCAATGAAACAGAATTTTTTAATTAAAAAATTTGAAAAATAAATAAACAAGTACTAAAATAAAATAAAATAGAATAAATATATTATTATTAACGCGTTTATTTTTCTCCGCGTGTTCAAATGCTATAAATAAGAGCTCACTGCCCACTACAGAACTTCATACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGACTTGAATTTCTGTCAGGGGTTCCTGAATAATTTAACCTGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTATGGGTTTTCTTGAATGATTTTAAAAAAGATGTACTAATTTACCCCTTCAAAGGTATTGAATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTATAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTCCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTCGGTGTATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTATAACTTGTGTACTCTTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGGAAAATGTTAGACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGAATGGCTGTACACAACACAAAATATTGATGCTTACATTTTGTTTCTGCTTTTATTTTAAGATCTTCATGTCCATCACTTTCCTGGTGCTCAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTATTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGTTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTAATAAAAGAGAGAGATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAATACTTTAAAGCTTCTTTAACGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAATTAGAATGGGACGATTAAGGAAAAGCGAGAATAGGCTTTGACGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAAACATAAGATGACGTTTAGTTCTTCTTAGTTTTCGACTGCAGACCATGACTAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGATGATAATGACTTCAATGCCATGTTATTTAATTGTTAGAAGTGCTGGTCATCACCAGCTCATAATTTCTACTTTGTGTACCATATGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAGAAGCAAAATAAAAAGAGGTGTGTGTGTGTGTGTGGGGGGGGGGGGGTTCTTGTTTGTCTATTAGAACATGTCACTTGTTCATTTTTGTTCCATGTTAGATGTGCAATCCAATTGCCAGAATATGTGCAACATTTATATCCCTAGTTGGCACCATTGATACTGCTTCTGTTAATCTGATAAAGCTATTTTGATGTGCTTTATCGGTGAGAGCAATTCACTCGACATTTTTATTCAACTCTTAGGATTCATTGTATATGACGTTATTTGTACATGTGGCTTTGTTGAAGTATCCTTCTCATCTATTGCTATCCCATTCCCTGCACCATTTTTCAGATATATTATACCTGTGAATTATGATATCAGGAAAAAGAGGTGCAGGATCCAGAGTTACAAAGCGACACTTGAACTTCTTTCCTGCAGCCAAGAAATTGATTGGAGAATGCACTGTCAGGAGTGCAATTCGATCTTCACAGATTATTCTGTGGGGAAGTGCTTCTGCAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAATTCAAGTCAGTCAATACTCAAATGATTGCTCTCTTGCTCCATTGCACAATCGGTGTGAATTGGAAATCCAGAAACTCTGCACACCCCTTTCATCTAATGTTTTACCTACGGAGGATGGTTTCCTGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTCTCTAGGGTGGATGGGAACTCGGGTAAATGGATTGATGCTGGAAATCGAGGTAAAACAGATGAGCTTATAAGGAAGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAGGTAATTTGTCCTCGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTTTCCATCGTGCTGAAACTACATAGGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCCAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTTTCTTTCTGATAAGGAATCAATTATGTTAGTTACTCACACGGCCTGATGTTTCTCTCAGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAATCTCAAGGAGAGTGTACAAGTACACACGATGAGGAGTCAATAGAAGGTAAACCATTCGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATCCCATCTGATCTTGTAATAGAATTGTCATGCCCCGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCA-TTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGG-GAGCAGCATAATTGATGGATTGATTG--G-TGATGTTACCATTCTATTTATTTATTGTTTAT-TTTCGTAGGTGCAATTATGCTTGG</genome_strand>
        <mrna_strand>TTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGGGATTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCAATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTATCATCTGGAATAACAAATTGCAAGCTCAAAGGGGAGTGTACAAGTACACACAATGGGGATTCAAAAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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AATATAGCAGGCCTACTAATTTTGGGTGAGTAGCATAATTGATGGACTGATTGCTGCTGATGTTGCCATTCTATTTATTTAAAGTTTTTATTTCGTTGGTGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331158" ref_strand="+" ref_description="SGN-E331158 [cTOD-6-H12]">
      <seq>agaagatcagaataagtcattcaggtcattcatttaacaaaagcatgaagttctttgccacgaatgagtcttcaagaatggtagcagtaactaacaaatattatgactgttcatgatgtgccgctcatgccaggagactgcagcactctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="71695" stop="70943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71395" g_stop="71263" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71262" i_stop="71159" i_length="104">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71158" g_stop="71140" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="152" r_length="19" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E331158" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>152</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71395" e_stop="71263"/>
          <exon e_start="71158" e_stop="71140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAGGTAATTTGTCCTCGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTTTCCATCGTGCTGAAACTACATAGGTAAGGAGACTGCAGCAGTCTGCA</genome_strand>
        <mrna_strand>AGAAGATCAGAATAAGTCATTCAGGTCATTCATTTAACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG........................................................................................................GAGACTGCAGCACTCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E302982" ref_strand="+" ref_description="SGN-E302982 [cLEW-26-G13]">
      <seq>gataacgaattcagtgtttcagctagctccagttacaaatcagactgcctattagttctatgacttccttttctcttgagctacttttggaaagcctagataagaatatagttgttgaagtatcctcctcatctgttgctatcccattccctgctccacttttcagatatacctgtgaattatgagatcaggaaaaagaggtgcaggacccagagttgcaaagtgacacttgaacttcgttcctgcagccaaagaaattgaccggagagtgcactgtcaggagttagattcgatcttcacggattattctgtggggaagtacttctgaaaagcaagatcctgagtccagattcctctgtcagatcaaaagtacttcacggattgtttccacatgctgcaaaaagagatctcgattttatgcttgttctaaagaggatatgagtattataggggaagttgatgcttgggatgtttatagttcaggtccttctgcattctattatgatggagatgatttgtcacatatacattctcatggtgaagaaaaccttaaaaattatttgacactcgagctatgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="72351" stop="71171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72051" g_stop="71471" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E302982" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72051" e_stop="71471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</genome_strand>
        <mrna_strand>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548087" ref_strand="+" ref_description="SGN-E548087 [TUS-57-P13](-)">
      <seq>aggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttatatttttttatttcataaaacatttttttcaaaaaaaaaaaaaaaaaactcgaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80659" stop="30592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80359" g_stop="80197" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="0.98"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="280" r_length="116" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="376" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78442" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="557" r_length="181" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78441" i_stop="78266" i_length="176">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78265" g_stop="78227" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="592" r_length="35" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E548087" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80359" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78442"/>
          <exon e_start="78265" e_stop="78227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCTAGCAAATATTATACAGTATACATAATAATGGATTATACAAATAAAAGTAAAATCATTAATGAAATACAATTAGATAAACGTTATATAATTGAAGATTTTATTTTAAATTATACATAAATATTAACTACGATGC</genome_strand>
        <mrna_strand>AGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCA-CCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTA-T-TATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAAC................................................................................................................................................................................ATTTT-TTTCAAA--AAAAAAAAAAAAAAACT-CGAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E394402" ref_strand="+" ref_description="SGN-E394402 [TUS-40-B20](-)">
      <seq>cagctacaagggagagtgcagcattctacagaagttatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttatttcatttatatttttttatttcataaaacaaattctttctatggttctccttttataatcgtttaatataaaattattttgtatcataattttttaaataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80401" stop="78065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80101" g_stop="79991" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="208" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78624" g_stop="78360" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="473" r_length="265" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E394402" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80101" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCGACAA-GGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCT</genome_strand>
        <mrna_strand>CAGCTACAAGGGAGAGTGCAGCATTCTACAGAAGTTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392139" ref_strand="+" ref_description="SGN-E392139 [TUS-24-J16](-)">
      <seq>gggcagtataggggttcttgatgcgtgggttgtttatagttcaggtctttttgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80850" stop="78167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80550" g_stop="80197" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="471" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="567" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78459" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="733" r_length="166" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392139" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80550" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78459"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATT</genome_strand>
        <mrna_strand>GGGCAGTATAGGGGTTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCTTTTTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E369254" ref_strand="+" ref_description="SGN-E369254 [TUS-25-G18](-)">
      <seq>atgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80830" stop="78161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80530" g_stop="80197" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="0.98"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="451" r_length="116" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="547" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78464" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="706" r_length="159" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E369254" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80530" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>ATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCA-CCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTA-T-TATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392436" ref_strand="+" ref_description="SGN-E392436 [TUS-34-C18](-)">
      <seq>tcaagaaaagcagcggtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatttatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80558" stop="78161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80258" g_stop="80197" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="178" r_length="116" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="274" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78464" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="433" r_length="159" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="434" polyA_stop="443"/>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392436" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80258" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>TCAAGAAAAGCAGCGGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATTTATGTAATCAATCTTCA-CCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTA-T-TATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392140" ref_strand="+" ref_description="SGN-E392140 [TUS-24-J16]">
      <seq>caaaatttgatcttgatttgtatgcttgttctaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaattttggtgtttaccaaatttactgtaatcaactccaatctactgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80894" stop="78220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80594" g_stop="80197" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="515" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="611" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78520" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="717" r_length="106" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392140" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80594" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAA-TTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCAT</genome_strand>
        <mrna_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTTGGTGTTTACCAAATTTACTGTAATCAACTCCAATCTACTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316516" ref_strand="+" ref_description="SGN-E316516 [cTOA-25-C18]">
      <seq>agaaccggaagctaccggagtatagaactcgccaccgtcgcagaagcggaacctaccggagtataaaactcgccaccgtcgcaggaccggaacatcatacgcaaccggatgaaaacccctaaaaccgaatcgattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtacagaggtggatggaactcgggtaaatggattgatacgggaaatcaaggtagaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccagagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcgatcttcaccccgagttgtggtgactgtgtattgtctgatgaaaggccgaggatgaaaatgagactagttaacatctggaataacaaattacaagctcataggagagtgtacaagtacactcgatggggattcaaaagaaggttctgtgtagctggggtgttatggcatctccaatccaaacacctaattttacatcagatttggtgttaaccaaatttactgtaatcaactccaatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="85102" stop="78224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84802" g_stop="84604" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84603" i_stop="80401" i_length="4203">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80400" g_stop="80197" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="403" r_length="204" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="520" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="616" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78624" g_stop="78524" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="717" r_length="101" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E316516" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84802" e_stop="84604"/>
          <exon e_start="80400" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTGTAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTTCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTTGGTATATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTAAAACTTGTGTACTCCTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGCAAAATGTTAAAACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACTCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGTATGGCTGTACACAACACAAAATATTGGTGCTTACATTTTGTTTCTGCTTTTATTATAAGATCTCCATGTACGTCACTTTCTTGGTGCTTAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTACTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGCTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTTATATAAGAGAGATATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAACACTTCTTTATACTGCTTCATTTGAATACTTTAAAGCTGCTTTAGCGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAAATAGAATGGGTCGATTAAGGAAAGGCGAGAATAGGCTCTGAGGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAATCAGAAGATGACGTTTAGTTCTTCTAAGTTTTCGACTGCAGACCATGACCAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGAAGATATTGACTTCAGTGCCATGTTATTTAATTGTTAGAAATGCTGGTAATCACCAGCTCATAATTTCTACTTTGTGTACCATACGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAAAAGCAAAATAAAAAGAGGTGTGTGTGTGTGGGGTGGGACAAAATGCGGGGACTACTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGCATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGAAGTTATAAAGAGAGAAATATATTAACGACATGGATCTTAGAGGAAGTTGCTTGGTTTGAACACTATAAAGCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGCGTTTAGTTCTTAGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACT</genome_strand>
        <mrna_strand>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAGAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAGAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCGATCTTCACCCCGAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCGAGGATGAAAATGAGACTAGTTAACATCTGGAATAACAAATTACAAGCTCATAGGAGAGTGTACAAGTACACTCGATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTATGGCATCTCCAATCCAAACACCTAATTTTACATCAGATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246635" ref_strand="+" ref_description="SGN-E246635 [cLEF-45-A11]">
      <seq>caaaatttgatcttgatttgtatgcttgttctaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaagccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80894" stop="79535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80594" g_stop="80197" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="515" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79835" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="568" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E246635" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80594" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTC</genome_strand>
        <mrna_strand>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAA.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E247894" ref_strand="+" ref_description="SGN-E247894 [cLEF-47-B19]">
      <seq>ttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctagaagaatacgatcatcggatggacttctttgaacagactgctgaaatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="81828" stop="80516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81528" g_stop="81074" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102">
            <donor d_prob="0.378" d_score="0.96"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80971" g_stop="80816" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="611" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E247894" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81528" e_stop="81074"/>
          <exon e_start="80971" e_stop="80816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</genome_strand>
        <mrna_strand>TTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392419" ref_strand="+" ref_description="SGN-E392419 [TUS-34-A10]">
      <seq>cttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctaaaagaatacgatcatcggatggacttctttgaacagactgctgaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="81829" stop="80519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81529" g_stop="81074" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102">
            <donor d_prob="0.378" d_score="0.96"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80971" g_stop="80819" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="609" r_length="153" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392419" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81529" e_stop="81074"/>
          <exon e_start="80971" e_stop="80819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGT</genome_strand>
        <mrna_strand>CTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAAAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E369255" ref_strand="+" ref_description="SGN-E369255 [TUS-25-G18]">
      <seq>gcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctagaagaatacgatcatcggatggacttctttgaacagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="81890" stop="80529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81590" g_stop="81074" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102">
            <donor d_prob="0.378" d_score="0.96"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80971" g_stop="80829" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="660" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E369255" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81590" e_stop="81074"/>
          <exon e_start="80971" e_stop="80829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACT</genome_strand>
        <mrna_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392437" ref_strand="+" ref_description="SGN-E392437 [TUS-34-C18]">
      <seq>agcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaaaagcaaggcattgcaaagtcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="81891" stop="80605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81591" g_stop="81074" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102">
            <donor d_prob="0.378" d_score="0.96"/>
            <acceptor a_prob="0.637" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80971" g_stop="80905" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="585" r_length="67" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E392437" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81591" e_stop="81074"/>
          <exon e_start="80971" e_stop="80905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAA</genome_strand>
        <mrna_strand>AGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAAAGCAAGGCATTGCAAAGTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E249077" ref_strand="+" ref_description="SGN-E249077 [cLEF-49-F7]">
      <seq>gcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcgggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtgaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="81890" stop="80632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81590" g_stop="81074" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102">
            <donor d_prob="0.378" d_score="0.96"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80971" g_stop="80932" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="557" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E249077" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81590" e_stop="81074"/>
          <exon e_start="80971" e_stop="80932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGAGTAAATACAGAACAAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAAC</genome_strand>
        <mrna_strand>GCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCGGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332667" ref_strand="+" ref_description="SGN-E332667 [cTOD-18-J22]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaagggaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="82137" stop="80804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81826" g_stop="81104" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="754" r_length="723" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E332667" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81826" e_stop="81104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTG</genome_strand>
        <mrna_strand>ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGGAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332553" ref_strand="+" ref_description="SGN-E332553 [cTOD-18-K23]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaccatttatgcagagcggttctttgcgcagaagctcacacatgatgaatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="82137" stop="80810"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81826" g_stop="81110" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="746" r_length="715" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E332553" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81826" e_stop="81110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCAT</genome_strand>
        <mrna_strand>ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGG-AACCATTTATGCAGAGCGGTTCTTTGCGCAGAAG-CTCACACATGATGAATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257256" ref_strand="+" ref_description="SGN-E257256 [cLEG-46-K11]">
      <seq>gctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatncacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="82119" stop="80873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81819" g_stop="81173" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E257256" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81819" e_stop="81173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATG</genome_strand>
        <mrna_strand>GCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATNCACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334044" ref_strand="+" ref_description="SGN-E334044 [cTOD-24-M14]">
      <seq>tcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatcttttacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="82137" stop="80889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81826" g_stop="81189" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="669" r_length="638" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E334044" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81826" e_stop="81189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGT</genome_strand>
        <mrna_strand>ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTTACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245170" ref_strand="+" ref_description="SGN-E245170 [cLEF-13-K12]">
      <seq>actttttaggattactggatcttgtttcactgattactttgtctgataatgcagacattttgctatgaactggattaggaagctatcaatggcatgttatgtatttgttagaaatgctgctcatcccagctcagaatttctactttgtgtgtcatatgtaggttaagagaggagtagtttgaattattatctcaaaaaggaaaataaaaagaagtttgaatgttgatatataccgtccttaagctgacttttctaaacgatgcttcacaatcaagctagaaaatgactaagcaagtgctgtcctaatgaaatggtggactgaagagtgcactggtaggagtgagattcgatcttcacagattattcggtggggatgtgcttctggaaagcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="82180" stop="81188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81880" g_stop="81488" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-E245170" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81880" e_stop="81488"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATG</genome_strand>
        <mrna_strand>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGGAAAGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>309</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3257" PGL_stop="8860"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3257" e_stop="3516"/>
            <exon e_start="4287" e_stop="4668"/>
            <exon e_start="5047" e_stop="5243"/>
            <exon e_start="5418" e_stop="5565"/>
            <exon e_start="6171" e_stop="6324"/>
            <exon e_start="7097" e_stop="7457"/>
            <exon e_start="8841" e_stop="8860"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.985"/>
          <exon-intron don_prob="0.909" acc_prob="0.878" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.975"/>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="3257" e_stop="3516" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4287" e_stop="4668" e_length="382"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.878">
            <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5047" e_stop="5243" e_length="197"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.959">
            <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5418" e_stop="5565" e_length="148"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6171" e_stop="6324" e_length="154"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772"/>
          </intron>
          <exon e_serial="6" e_score="0.975">
            <gDNA_exon_boundary e_start="7097" e_stop="7457" e_length="361"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="7458" i_stop="8840" i_length="1383"/>
          </intron>
          <exon e_serial="7" e_score="0.900">
            <gDNA_exon_boundary e_start="8841" e_stop="8860" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3257" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3327" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3327" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3335" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3388" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3411" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4547" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4566" stop="4668"/>
              <exon start="5047" stop="5148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5077" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5205" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7457"/>
              <exon start="8841" stop="8860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231478" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5424" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376668" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427325" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAATATTATAATTTTACACACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA : GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA : GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG : CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG : GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA : AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAA : AAAAGAAAAAAGAAAAAAAA</gDNA_template>
            <first_frame> *  K  Y  Y  N  F  T  H  K  R  N  K  R  I  *  K  V  G  N  R  I  E  G  G  E  A  L  Y  *  P  F  G  R  C  F  S  S  K  K  L  L  R  L  L  S  I  C  K  I  *  R  L  A  Y  K  P  S  *  G  F  E  Q  L  *  F  F  L  M  E  V  A  G  S  T  R  K  P  F  Q  Q  T  E  I  N  W  D  K :   L  D  K  T  R  F  Y  V  V  G  A  G  I  F  T  G  L  T  V  A  L  Y  P  I  S  V  I  K  T  R  M  Q  V  A  T  N  N  A  A  K  E  S  A  F  S  V  V  R  G  L  V  R  N  D  G  I  P  G  L  Y  R  G  F  G  T  V  I  T  G  A  V  P  A  R  I  I  F  L  T  A  L  E  T  T  K  V  T  A  F  K  M  V  E  P  F  K  L  S  E  P  V  Q  A  A  I  A  N  G  V  A  G  M  L  A  S  L  C  S  Q  S  V  F  V  P  I  D  I  :  V  S  Q  R  L  M  V  Q  G  Y  S  G  H  A  S  Y  N  G  G  L  D  V  A  R  K  V  L  K  S  E  G  I  R  G  L  Y  R  G  F  S  L  S  V  L  T  Y  S  P  S  S  A  V  W  W  A  S  Y  G  S  S  Q  R  F  I  W  S :   K  L  L  D  N  G  T  E  H  G  G  P  A  P  S  Q  G  K  I  V  S  V  Q  A  A  G  G  I  I  A  G  A  T  A  S  C  I  T  T  P  L  D  T  I  K  T  R  L  Q  :  V  M  G  H  D  K  R  P  S  A  G  Q  V  V  K  Q  L  I  A  E  D  G  W  T  G  F  Y  R  G  L  G  P  R  F  V  S  M  S  A  W  G  T  S  M  I  L  A  Y  E  Y  L   : K  R  L  C  A  V  N  E  *  I  D  E  S  *  L  P  D  D  S  C  G  R  I  F  I  L  L  T  Y  S  I  *  E  L  E  I  T  R  P  R  L  I  S  C  L  Y  T  N  D  T  M  T  V  I  *  V  D  L  E  S  K  Y  L  A  K  I  Q  L  I  F  L  R  D  F  L  Q  Y  S  *  M  I  F  A  R  *  M  P  H  S  L  V  V  V  S  H  D  K  E  D  P  *  I  I  F  A  R  *  *  M  *  N  V  I  F  I  H  T  R  I  D  K :   K  E  K  R  K  K  </first_frame>
            <second_frame>  E  N  I  I  I  L  H  T  K  G  I  N  G  F  K  K  L  V  I  E  *  K  E  E  K  H  Y  I  D  H  L  V  G  A  F  P  P  R  N  F  S  D  Y  S  P  F  A  K  F  N  D  L  L  I  S  R  V  R  V  L  N  S  C  N  F  F  *  W  R  L  L  D  L  Q  G  S  H  F  N  K  P  R  L  T  G  T   : S  L  I  R  L  G  S  M  S  *  E  L  G  Y  L  Q  G  L  L  L  H  Y  T  P  F  L  S  S  R  L  E  C  R  W  Q  P  I  M  L  Q  K  R  V  H  F  L  L  S  G  A  *  C  E  M  M  V  F  P  V  Y  I  E  D  L  E  L  S  L  Q  G  R  F  L  P  E  L  Y  F  S  Q  H  *  R  P  L  R  *  L  H  L  R  W  W  N  H  S  S  Y  Q  N  L  Y  R  Q  L  *  Q  M  V  L  L  A  C  W  R  L  F  V  H  N  P  S  L  F  Q  L  T  * :   L  V  K  G  *  W  C  K  D  T  Q  D  M  Q  A  T  M  E  A  W  M  L  L  A  K  F  *  S  Q  K  V  Y  V  D  Y  I  E  D  S  V  C  L  F  *  H  T  P  H  P  V  L  Y  G  G  Q  V  M  V  R  A  S  A  S  Y  G   : A  S  S  W  I  M  E  L  S  M  V  G  L  L  P  A  R  G  K  *  C  Q  F  K  L  L  V  G  S  S  P  V  L  L  H  L  A  *  Q  L  H  W  T  P  L  K  L  G  C  R :   *  W  D  T  I  R  D  L  V  Q  G  K  *  L  S  S  *  L  L  R  M  V  G  Q  D  F  T  G  D  *  V  Q  D  L  S  A  C  Q  R  G  E  P  P  *  Y  L  P  M  N  I  S  :  S  A  C  V  Q  *  T  N  R  L  M  K  A  S  C  Q  T  T  L  A  V  G  F  L  Y  Y  *  H  T  V  F  E  S  W  R  *  Q  D  R  G  *  L  A  V  C  I  Q  M  T  L  *  L  L  Y  E  L  T  W  N  P  S  T  W  P  K  Y  N  *  F  F  L  G  I  S  Y  N  I  L  K  *  F  L  P  D  K  C  H  I  H  W  L  *  *  V  M  T  R  R  T  L  E  *  F  L  L  D  N  K  C  K  M  *  Y  S  F  I  Q  E  *  I   : K  K  K  K  E  K  K </second_frame>
            <third_frame>   K  I  L  *  F  Y  T  Q  K  E  *  T  D  L  K  S  W  *  *  N  R  R  R  R  S  I  I  L  T  I  W  S  V  L  F  L  Q  E  T  S  P  I  T  L  H  L  Q  N  L  T  T  C  L  *  A  E  L  G  F  *  T  V  V  I  F  F  N  G  G  C  W  I  Y  K  E  A  I  S  T  N  R  D  *  L  G  Q  :  A  *  *  D  *  V  L  C  R  R  S  W  D  I  Y  R  A  Y  C  C  T  I  P  H  F  C  H  Q  D  *  N  A  G  G  N  Q  *  C  C  K  R  E  C  I  F  C  C  Q  G  P  S  A  K  *  W  Y  S  R  F  I  *  R  I  W  N  C  H  Y  R  G  G  S  C  Q  N  Y  I  S  H  S  T  R  D  H  *  G  D  C  I  *  D  G  G  T  I  Q  A  I  R  T  C  T  G  S  Y  S  K  W  C  C  W  H  A  G  V  S  L  F  T  I  R  L  C  S  N  *  H   : S  *  S  K  V  N  G  A  R  I  L  R  T  C  K  L  Q  W  R  L  G  C  C  S  Q  S  S  E  V  R  R  Y  T  W  T  I  *  R  I  Q  S  V  C  S  N  I  L  P  I  Q  C  C  M  V  G  K  L  W  F  E  P  A  L  H  M  E  :  Q  A  L  G  *  W  N  *  A  W  W  A  C  S  Q  P  G  E  N  S  V  S  S  S  C  W  W  D  H  R  R  C  Y  C  I  L  H  N  N  S  I  G  H  H  *  N  *  V  A   : G  D  G  T  R  *  E  T  *  C  R  A  S  S  *  A  A  N  C  *  G  W  L  D  R  I  L  Q  G  I  R  S  K  I  C  Q  H  V  S  V  G  N  L  H  D  T  C  L  *  I  S  Q :   A  L  V  C  S  K  R  I  D  *  *  K  L  A  A  R  R  L  L  R  *  D  F  Y  T  T  D  I  Q  Y  L  R  A  G  D  N  K  T  A  A  D  *  L  S  V  Y  K  *  H  Y  D  C  Y  M  S  *  L  G  I  Q  V  P  G  Q  N  T  I  N  F  S  *  G  F  L  T  I  F  L  N  D  F  C  Q  I  N  A  T  F  I  G  C  S  E  S  *  Q  G  G  P  L  N  N  F  C  *  I  I  N  V  K  C  N  I  H  S  Y  K  N  R  *  :  K  R  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3449" stop="3516"/>
                    <exon start="4287" stop="4668"/>
                    <exon start="5047" stop="5243"/>
                    <exon start="5418" stop="5565"/>
                    <exon start="6171" stop="6324"/>
                    <exon start="7097" stop="7122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLMEVAGSTRKPFQQTEINWDKLDKTRFYVVGAGIFTGLTVALYPISVIKTRMQVATNNAAKESAFSVVRGLVRNDGIPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFKLSEPVQAAIANGVAGMLASLCSQSVFVPIDIVSQRLMVQGYSGHASYNGGLDVARKVLKSEGIRGLYRGFSLSVLTYSPSSAVWWASYGSSQRFIWSKLLDNGTEHGGPAPSQGKIVSVQAAGGIIAGATASCITTPLDTIKTRLQVMGHDKRPSAGQVVKQLIAEDGWTGFYRGLGPRFVSMSAWGTSMILAYEYLKRLCAVNE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3257" e_stop="3516"/>
            <exon e_start="4287" e_stop="4668"/>
            <exon e_start="5047" e_stop="5243"/>
            <exon e_start="5418" e_stop="5565"/>
            <exon e_start="6171" e_stop="6324"/>
            <exon e_start="7097" e_stop="7494"/>
            <exon e_start="7556" e_stop="7581"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.985"/>
          <exon-intron don_prob="0.909" acc_prob="0.878" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.861" e_score="0.877"/>
          <exon-only e_score="0.577"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="3257" e_stop="3516" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4287" e_stop="4668" e_length="382"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.878">
            <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5047" e_stop="5243" e_length="197"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.959">
            <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5418" e_stop="5565" e_length="148"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6171" e_stop="6324" e_length="154"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772"/>
          </intron>
          <exon e_serial="6" e_score="0.877">
            <gDNA_exon_boundary e_start="7097" e_stop="7494" e_length="398"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.861">
            <gDNA_intron_boundary i_start="7495" i_stop="7555" i_length="61"/>
          </intron>
          <exon e_serial="7" e_score="0.577">
            <gDNA_exon_boundary e_start="7556" e_stop="7581" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3257" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3327" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3327" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3335" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3388" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3411" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4547" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4566" stop="4668"/>
              <exon start="5047" stop="5148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5077" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5205" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231478" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5424" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376668" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5479" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7494"/>
              <exon start="7556" stop="7581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453365" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427325" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAATATTATAATTTTACACACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA : GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA : GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG : CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG : GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA : AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAAATTCTTGATCAACTTCGGTTTTCAAGCCTCTAAATTC : AATTGCCCGATTGTACTAGGTCTGCA</gDNA_template>
            <first_frame> *  K  Y  Y  N  F  T  H  K  R  N  K  R  I  *  K  V  G  N  R  I  E  G  G  E  A  L  Y  *  P  F  G  R  C  F  S  S  K  K  L  L  R  L  L  S  I  C  K  I  *  R  L  A  Y  K  P  S  *  G  F  E  Q  L  *  F  F  L  M  E  V  A  G  S  T  R  K  P  F  Q  Q  T  E  I  N  W  D  K :   L  D  K  T  R  F  Y  V  V  G  A  G  I  F  T  G  L  T  V  A  L  Y  P  I  S  V  I  K  T  R  M  Q  V  A  T  N  N  A  A  K  E  S  A  F  S  V  V  R  G  L  V  R  N  D  G  I  P  G  L  Y  R  G  F  G  T  V  I  T  G  A  V  P  A  R  I  I  F  L  T  A  L  E  T  T  K  V  T  A  F  K  M  V  E  P  F  K  L  S  E  P  V  Q  A  A  I  A  N  G  V  A  G  M  L  A  S  L  C  S  Q  S  V  F  V  P  I  D  I  :  V  S  Q  R  L  M  V  Q  G  Y  S  G  H  A  S  Y  N  G  G  L  D  V  A  R  K  V  L  K  S  E  G  I  R  G  L  Y  R  G  F  S  L  S  V  L  T  Y  S  P  S  S  A  V  W  W  A  S  Y  G  S  S  Q  R  F  I  W  S :   K  L  L  D  N  G  T  E  H  G  G  P  A  P  S  Q  G  K  I  V  S  V  Q  A  A  G  G  I  I  A  G  A  T  A  S  C  I  T  T  P  L  D  T  I  K  T  R  L  Q  :  V  M  G  H  D  K  R  P  S  A  G  Q  V  V  K  Q  L  I  A  E  D  G  W  T  G  F  Y  R  G  L  G  P  R  F  V  S  M  S  A  W  G  T  S  M  I  L  A  Y  E  Y  L   : K  R  L  C  A  V  N  E  *  I  D  E  S  *  L  P  D  D  S  C  G  R  I  F  I  L  L  T  Y  S  I  *  E  L  E  I  T  R  P  R  L  I  S  C  L  Y  T  N  D  T  M  T  V  I  *  V  D  L  E  S  K  Y  L  A  K  I  Q  L  I  F  L  R  D  F  L  Q  Y  S  *  M  I  F  A  R  *  M  P  H  S  L  V  V  V  S  H  D  K  E  D  P  *  I  I  F  A  R  *  *  M  *  N  V  I  F  I  H  T  R  I  D  K  F  L  I  N  F  G  F  Q  A  S  K  F  :  N  C  P  I  V  L  G  L   </first_frame>
            <second_frame>  E  N  I  I  I  L  H  T  K  G  I  N  G  F  K  K  L  V  I  E  *  K  E  E  K  H  Y  I  D  H  L  V  G  A  F  P  P  R  N  F  S  D  Y  S  P  F  A  K  F  N  D  L  L  I  S  R  V  R  V  L  N  S  C  N  F  F  *  W  R  L  L  D  L  Q  G  S  H  F  N  K  P  R  L  T  G  T   : S  L  I  R  L  G  S  M  S  *  E  L  G  Y  L  Q  G  L  L  L  H  Y  T  P  F  L  S  S  R  L  E  C  R  W  Q  P  I  M  L  Q  K  R  V  H  F  L  L  S  G  A  *  C  E  M  M  V  F  P  V  Y  I  E  D  L  E  L  S  L  Q  G  R  F  L  P  E  L  Y  F  S  Q  H  *  R  P  L  R  *  L  H  L  R  W  W  N  H  S  S  Y  Q  N  L  Y  R  Q  L  *  Q  M  V  L  L  A  C  W  R  L  F  V  H  N  P  S  L  F  Q  L  T  * :   L  V  K  G  *  W  C  K  D  T  Q  D  M  Q  A  T  M  E  A  W  M  L  L  A  K  F  *  S  Q  K  V  Y  V  D  Y  I  E  D  S  V  C  L  F  *  H  T  P  H  P  V  L  Y  G  G  Q  V  M  V  R  A  S  A  S  Y  G   : A  S  S  W  I  M  E  L  S  M  V  G  L  L  P  A  R  G  K  *  C  Q  F  K  L  L  V  G  S  S  P  V  L  L  H  L  A  *  Q  L  H  W  T  P  L  K  L  G  C  R :   *  W  D  T  I  R  D  L  V  Q  G  K  *  L  S  S  *  L  L  R  M  V  G  Q  D  F  T  G  D  *  V  Q  D  L  S  A  C  Q  R  G  E  P  P  *  Y  L  P  M  N  I  S  :  S  A  C  V  Q  *  T  N  R  L  M  K  A  S  C  Q  T  T  L  A  V  G  F  L  Y  Y  *  H  T  V  F  E  S  W  R  *  Q  D  R  G  *  L  A  V  C  I  Q  M  T  L  *  L  L  Y  E  L  T  W  N  P  S  T  W  P  K  Y  N  *  F  F  L  G  I  S  Y  N  I  L  K  *  F  L  P  D  K  C  H  I  H  W  L  *  *  V  M  T  R  R  T  L  E  *  F  L  L  D  N  K  C  K  M  *  Y  S  F  I  Q  E  *  I  N  S  *  S  T  S  V  F  K  P  L  N  S :   I  A  R  L  Y  *  V  C  </second_frame>
            <third_frame>   K  I  L  *  F  Y  T  Q  K  E  *  T  D  L  K  S  W  *  *  N  R  R  R  R  S  I  I  L  T  I  W  S  V  L  F  L  Q  E  T  S  P  I  T  L  H  L  Q  N  L  T  T  C  L  *  A  E  L  G  F  *  T  V  V  I  F  F  N  G  G  C  W  I  Y  K  E  A  I  S  T  N  R  D  *  L  G  Q  :  A  *  *  D  *  V  L  C  R  R  S  W  D  I  Y  R  A  Y  C  C  T  I  P  H  F  C  H  Q  D  *  N  A  G  G  N  Q  *  C  C  K  R  E  C  I  F  C  C  Q  G  P  S  A  K  *  W  Y  S  R  F  I  *  R  I  W  N  C  H  Y  R  G  G  S  C  Q  N  Y  I  S  H  S  T  R  D  H  *  G  D  C  I  *  D  G  G  T  I  Q  A  I  R  T  C  T  G  S  Y  S  K  W  C  C  W  H  A  G  V  S  L  F  T  I  R  L  C  S  N  *  H   : S  *  S  K  V  N  G  A  R  I  L  R  T  C  K  L  Q  W  R  L  G  C  C  S  Q  S  S  E  V  R  R  Y  T  W  T  I  *  R  I  Q  S  V  C  S  N  I  L  P  I  Q  C  C  M  V  G  K  L  W  F  E  P  A  L  H  M  E  :  Q  A  L  G  *  W  N  *  A  W  W  A  C  S  Q  P  G  E  N  S  V  S  S  S  C  W  W  D  H  R  R  C  Y  C  I  L  H  N  N  S  I  G  H  H  *  N  *  V  A   : G  D  G  T  R  *  E  T  *  C  R  A  S  S  *  A  A  N  C  *  G  W  L  D  R  I  L  Q  G  I  R  S  K  I  C  Q  H  V  S  V  G  N  L  H  D  T  C  L  *  I  S  Q :   A  L  V  C  S  K  R  I  D  *  *  K  L  A  A  R  R  L  L  R  *  D  F  Y  T  T  D  I  Q  Y  L  R  A  G  D  N  K  T  A  A  D  *  L  S  V  Y  K  *  H  Y  D  C  Y  M  S  *  L  G  I  Q  V  P  G  Q  N  T  I  N  F  S  *  G  F  L  T  I  F  L  N  D  F  C  Q  I  N  A  T  F  I  G  C  S  E  S  *  Q  G  G  P  L  N  N  F  C  *  I  I  N  V  K  C  N  I  H  S  Y  K  N  R  *  I  L  D  Q  L  R  F  S  S  L  *  I   : Q  L  P  D  C  T  R  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3449" stop="3516"/>
                    <exon start="4287" stop="4668"/>
                    <exon start="5047" stop="5243"/>
                    <exon start="5418" stop="5565"/>
                    <exon start="6171" stop="6324"/>
                    <exon start="7097" stop="7122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLMEVAGSTRKPFQQTEINWDKLDKTRFYVVGAGIFTGLTVALYPISVIKTRMQVATNNAAKESAFSVVRGLVRNDGIPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFKLSEPVQAAIANGVAGMLASLCSQSVFVPIDIVSQRLMVQGYSGHASYNGGLDVARKVLKSEGIRGLYRGFSLSVLTYSPSSAVWWASYGSSQRFIWSKLLDNGTEHGGPAPSQGKIVSVQAAGGIIAGATASCITTPLDTIKTRLQVMGHDKRPSAGQVVKQLIAEDGWTGFYRGLGPRFVSMSAWGTSMILAYEYLKRLCAVNE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="4270" e_stop="4668"/>
            <exon e_start="5047" e_stop="5243"/>
            <exon e_start="5418" e_stop="5565"/>
            <exon e_start="6171" e_stop="6324"/>
            <exon e_start="7097" e_stop="7457"/>
            <exon e_start="8841" e_stop="8860"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.909" acc_prob="0.878" e_score="0.987"/>
          <exon-intron don_prob="0.979" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.975"/>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="4270" e_stop="4668" e_length="399"/>
          </exon>
          <intron i_serial="1" don_prob="0.909" acc_prob="0.878">
            <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5047" e_stop="5243" e_length="197"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.959">
            <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5418" e_stop="5565" e_length="148"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6171" e_stop="6324" e_length="154"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772"/>
          </intron>
          <exon e_serial="5" e_score="0.975">
            <gDNA_exon_boundary e_start="7097" e_stop="7457" e_length="361"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="7458" i_stop="8840" i_length="1383"/>
          </intron>
          <exon e_serial="6" e_score="0.900">
            <gDNA_exon_boundary e_start="8841" e_stop="8860" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4270" stop="4606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4547" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4566" stop="4668"/>
              <exon start="5047" stop="5148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5077" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5205" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7457"/>
              <exon start="8841" stop="8860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5206" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231478" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5424" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376668" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427325" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA : GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG : CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG : GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA : AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCATACAAGAATAGATAA : AAAAGAAAAAAGAAAAAAAA</gDNA_template>
            <first_frame> F  H  L  *  C  R  L  D  K  T  R  F  Y  V  V  G  A  G  I  F  T  G  L  T  V  A  L  Y  P  I  S  V  I  K  T  R  M  Q  V  A  T  N  N  A  A  K  E  S  A  F  S  V  V  R  G  L  V  R  N  D  G  I  P  G  L  Y  R  G  F  G  T  V  I  T  G  A  V  P  A  R  I  I  F  L  T  A  L  E  T  T  K  V  T  A  F  K  M  V  E  P  F  K  L  S  E  P  V  Q  A  A  I  A  N  G  V  A  G  M  L  A  S  L  C  S  Q  S  V  F  V  P  I  D  I  :  V  S  Q  R  L  M  V  Q  G  Y  S  G  H  A  S  Y  N  G  G  L  D  V  A  R  K  V  L  K  S  E  G  I  R  G  L  Y  R  G  F  S  L  S  V  L  T  Y  S  P  S  S  A  V  W  W  A  S  Y  G  S  S  Q  R  F  I  W  S :   K  L  L  D  N  G  T  E  H  G  G  P  A  P  S  Q  G  K  I  V  S  V  Q  A  A  G  G  I  I  A  G  A  T  A  S  C  I  T  T  P  L  D  T  I  K  T  R  L  Q  :  V  M  G  H  D  K  R  P  S  A  G  Q  V  V  K  Q  L  I  A  E  D  G  W  T  G  F  Y  R  G  L  G  P  R  F  V  S  M  S  A  W  G  T  S  M  I  L  A  Y  E  Y  L   : K  R  L  C  A  V  N  E  *  I  D  E  S  *  L  P  D  D  S  C  G  R  I  F  I  L  L  T  Y  S  I  *  E  L  E  I  T  R  P  R  L  I  S  C  L  Y  T  N  D  T  M  T  V  I  *  V  D  L  E  S  K  Y  L  A  K  I  Q  L  I  F  L  R  D  F  L  Q  Y  S  *  M  I  F  A  R  *  M  P  H  S  L  V  V  V  S  H  D  K  E  D  P  *  I  I  F  A  R  *  *  M  *  N  V  I  F  I  H  T  R  I  D  K :   K  E  K  R  K  K  </first_frame>
            <second_frame>  S  T  F  D  A  G  L  I  R  L  G  S  M  S  *  E  L  G  Y  L  Q  G  L  L  L  H  Y  T  P  F  L  S  S  R  L  E  C  R  W  Q  P  I  M  L  Q  K  R  V  H  F  L  L  S  G  A  *  C  E  M  M  V  F  P  V  Y  I  E  D  L  E  L  S  L  Q  G  R  F  L  P  E  L  Y  F  S  Q  H  *  R  P  L  R  *  L  H  L  R  W  W  N  H  S  S  Y  Q  N  L  Y  R  Q  L  *  Q  M  V  L  L  A  C  W  R  L  F  V  H  N  P  S  L  F  Q  L  T  * :   L  V  K  G  *  W  C  K  D  T  Q  D  M  Q  A  T  M  E  A  W  M  L  L  A  K  F  *  S  Q  K  V  Y  V  D  Y  I  E  D  S  V  C  L  F  *  H  T  P  H  P  V  L  Y  G  G  Q  V  M  V  R  A  S  A  S  Y  G   : A  S  S  W  I  M  E  L  S  M  V  G  L  L  P  A  R  G  K  *  C  Q  F  K  L  L  V  G  S  S  P  V  L  L  H  L  A  *  Q  L  H  W  T  P  L  K  L  G  C  R :   *  W  D  T  I  R  D  L  V  Q  G  K  *  L  S  S  *  L  L  R  M  V  G  Q  D  F  T  G  D  *  V  Q  D  L  S  A  C  Q  R  G  E  P  P  *  Y  L  P  M  N  I  S  :  S  A  C  V  Q  *  T  N  R  L  M  K  A  S  C  Q  T  T  L  A  V  G  F  L  Y  Y  *  H  T  V  F  E  S  W  R  *  Q  D  R  G  *  L  A  V  C  I  Q  M  T  L  *  L  L  Y  E  L  T  W  N  P  S  T  W  P  K  Y  N  *  F  F  L  G  I  S  Y  N  I  L  K  *  F  L  P  D  K  C  H  I  H  W  L  *  *  V  M  T  R  R  T  L  E  *  F  L  L  D  N  K  C  K  M  *  Y  S  F  I  Q  E  *  I   : K  K  K  K  E  K  K </second_frame>
            <third_frame>   P  P  L  M  Q  A  *  *  D  *  V  L  C  R  R  S  W  D  I  Y  R  A  Y  C  C  T  I  P  H  F  C  H  Q  D  *  N  A  G  G  N  Q  *  C  C  K  R  E  C  I  F  C  C  Q  G  P  S  A  K  *  W  Y  S  R  F  I  *  R  I  W  N  C  H  Y  R  G  G  S  C  Q  N  Y  I  S  H  S  T  R  D  H  *  G  D  C  I  *  D  G  G  T  I  Q  A  I  R  T  C  T  G  S  Y  S  K  W  C  C  W  H  A  G  V  S  L  F  T  I  R  L  C  S  N  *  H   : S  *  S  K  V  N  G  A  R  I  L  R  T  C  K  L  Q  W  R  L  G  C  C  S  Q  S  S  E  V  R  R  Y  T  W  T  I  *  R  I  Q  S  V  C  S  N  I  L  P  I  Q  C  C  M  V  G  K  L  W  F  E  P  A  L  H  M  E  :  Q  A  L  G  *  W  N  *  A  W  W  A  C  S  Q  P  G  E  N  S  V  S  S  S  C  W  W  D  H  R  R  C  Y  C  I  L  H  N  N  S  I  G  H  H  *  N  *  V  A   : G  D  G  T  R  *  E  T  *  C  R  A  S  S  *  A  A  N  C  *  G  W  L  D  R  I  L  Q  G  I  R  S  K  I  C  Q  H  V  S  V  G  N  L  H  D  T  C  L  *  I  S  Q :   A  L  V  C  S  K  R  I  D  *  *  K  L  A  A  R  R  L  L  R  *  D  F  Y  T  T  D  I  Q  Y  L  R  A  G  D  N  K  T  A  A  D  *  L  S  V  Y  K  *  H  Y  D  C  Y  M  S  *  L  G  I  Q  V  P  G  Q  N  T  I  N  F  S  *  G  F  L  T  I  F  L  N  D  F  C  Q  I  N  A  T  F  I  G  C  S  E  S  *  Q  G  G  P  L  N  N  F  C  *  I  I  N  V  K  C  N  I  H  S  Y  K  N  R  *  :  K  R  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4282" stop="4668"/>
                    <exon start="5047" stop="5243"/>
                    <exon start="5418" stop="5565"/>
                    <exon start="6171" stop="6324"/>
                    <exon start="7097" stop="7122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CRLDKTRFYVVGAGIFTGLTVALYPISVIKTRMQVATNNAAKESAFSVVRGLVRNDGIPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFKLSEPVQAAIANGVAGMLASLCSQSVFVPIDIVSQRLMVQGYSGHASYNGGLDVARKVLKSEGIRGLYRGFSLSVLTYSPSSAVWWASYGSSQRFIWSKLLDNGTEHGGPAPSQGKIVSVQAAGGIIAGATASCITTPLDTIKTRLQVMGHDKRPSAGQVVKQLIAEDGWTGFYRGLGPRFVSMSAWGTSMILAYEYLKRLCAVNE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11477" PGL_stop="7963"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11474" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8643" e_stop="7963"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.092" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11474" e_stop="11367" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.092">
            <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8643" e_stop="7963" e_length="681"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11474" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11473" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11470" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11468" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11462" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11456" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11447" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11169" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8560" stop="7963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8560" stop="7965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8560" stop="7965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCCA</gDNA_template>
            <first_frame> K  N  L  L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  I  G  S  F  G  E  K  *  F  I  G  Q  N  *  Y  R  L  F  G  L  P  P  L  L  Q  *  R  T  K  S  E  I  N  T  L  F  H  S  F  S  I  S  Y  F  P  S  *  *  R  V  L  R  V  *  Y  R  V  R  *  I  L  K  P  F  F  N  V  I  Q  L  K  R  Q  P  A  S  C  F  I  M  *  C  R  S  I  D  V  L  L  V  N  L  L  K  *  *  L  V  F  G  F  L  E  L  Y  G  P  S  N  Y  L  K  N  K  L  A  G  W  A  F  A  T  P </first_frame>
            <second_frame>  K  I  F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  T  K  M  V  N  *  I  Q  H  H  H  L  R  N  M  P  R  *  T  A  M  M  T  K  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V  L  A  A  L  E  K  S  N  L  L  G  K  I  D  T  G  C  L  V  C  L  P  F  Y  S  K  G  L  R  V  R  S  T  H  Y  S  I  P  F  P  F  H  I  F  L  A  S  E  E  F  *  E  C  N  I  E  *  D  R  F  L  S  H  F  L  M  *  F  S  *  K  D  S  L  L  V  A  S  *  C  D  V  G  A  L  M  F  C  W  S  I  Y  S  N  S  N  W  S  L  V  F  W  N  F  M  A  H  Q  I  I  S  R  I  N  W  L  A  G  R  L  Q  L   </second_frame>
            <third_frame>   K  S  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : Y  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  *  R  R  W  *  T  E  Y  S  I  I  T  *  G  I  C  Q  G  K  P  R  *  *  R  R  *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L  Y  W  Q  L  W  R  K  V  I  Y  W  A  K  L  I  Q  A  V  W  F  A  S  P  S  T  V  K  D  *  E  *  D  Q  H  T  I  P  F  L  F  H  F  I  F  S  *  L  V  K  S  S  E  S  V  I  *  S  K  I  D  S  *  A  I  F  *  C  N  S  A  K  K  T  A  C  *  L  L  H  N  V  M  *  E  H  *  C  F  V  G  Q  F  T  Q  I  V  T  G  L  W  F  F  G  T  L  W  P  I  K  L  S  Q  E  *  I  G  W  L  G  V  C  N  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11474" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8643" stop="8416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNLLEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDEDGELNTASSLEEYAKVNRDDDEDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="11477" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8643" e_stop="8529"/>
            <exon e_start="8438" e_stop="8023"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.092" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.948"/>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11477" e_stop="11367" e_length="111"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.092">
            <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620"/>
          </intron>
          <exon e_serial="7" e_score="0.948">
            <gDNA_exon_boundary e_start="8643" e_stop="8529" e_length="115"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8528" i_stop="8439" i_length="90"/>
          </intron>
          <exon e_serial="8" e_score="0.909">
            <gDNA_exon_boundary e_start="8438" e_stop="8023" e_length="416"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11477" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8529"/>
              <exon start="8438" stop="8193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11474" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11471" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8529"/>
              <exon start="8438" stop="8333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11456" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11444" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8529"/>
              <exon start="8438" stop="8339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10426" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8529"/>
              <exon start="8438" stop="8023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418816" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8618" stop="8529"/>
              <exon start="8438" stop="8023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442919" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATG : AAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAA</gDNA_template>
            <first_frame> F  K  N  L  L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D   : E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  I  G  S  F  G  E  K  *  F  I  G  Q  N  *  Y  R  L  F  G  L  P  P  L  L  Q  *  R  T  K  S  E  I  N  T  L  F  H  S  F  S  I  S  Y  F  P  S  *  *  R  V  L  R  V  *  Y  R  V  R  *  I  L  K  P  F  F  N  V  I  Q  L  K  R  Q  P  A  S  C  F  I  M  *  C  R  S  I  D  V  L  L  V  N  L  L  K  *  *  L  V  F  G  F  L  E </first_frame>
            <second_frame>  S  K  I  F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  :  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V  L  A  A  L  E  K  S  N  L  L  G  K  I  D  T  G  C  L  V  C  L  P  F  Y  S  K  G  L  R  V  R  S  T  H  Y  S  I  P  F  P  F  H  I  F  L  A  S  E  E  F  *  E  C  N  I  E  *  D  R  F  L  S  H  F  L  M  *  F  S  *  K  D  S  L  L  V  A  S  *  C  D  V  G  A  L  M  F  C  W  S  I  Y  S  N  S  N  W  S  L  V  F  W   </second_frame>
            <third_frame>   Q  K  S  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : Y  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  * :   R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L  Y  W  Q  L  W  R  K  V  I  Y  W  A  K  L  I  Q  A  V  W  F  A  S  P  S  T  V  K  D  *  E  *  D  Q  H  T  I  P  F  L  F  H  F  I  F  S  *  L  V  K  S  S  E  S  V  I  *  S  K  I  D  S  *  A  I  F  *  C  N  S  A  K  K  T  A  C  *  L  L  H  N  V  M  *  E  H  *  C  F  V  G  Q  F  T  Q  I  V  T  G  L  W  F  F  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11477" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8643" stop="8529"/>
                    <exon start="8438" stop="8416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKNLLEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8537" stop="8529"/>
                    <exon start="8438" stop="8178"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TVMKMKVKLFEMHNLENNHMALYRSPFMVHSLMHTSSFVLAALEKSNLLGKIDTGCLVCLPFYSKGLRVRSTHYSIPFPFHIFLASEEF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="11474" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8643" e_stop="8520"/>
            <exon e_start="8453" e_stop="8196"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.092" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.935"/>
          <exon-only e_score="0.884"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11474" e_stop="11367" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.092">
            <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620"/>
          </intron>
          <exon e_serial="7" e_score="0.935">
            <gDNA_exon_boundary e_start="8643" e_stop="8520" e_length="124"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8519" i_stop="8454" i_length="66"/>
          </intron>
          <exon e_serial="8" e_score="0.884">
            <gDNA_exon_boundary e_start="8453" e_stop="8196" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11474" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11456" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11455" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8520"/>
              <exon start="8453" stop="8262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11437" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8520"/>
              <exon start="8453" stop="8213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11374" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8520"/>
              <exon start="8453" stop="8196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576863" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAG : ATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTA</gDNA_template>
            <first_frame> K  N  L  L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E   : D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  I  G  S  F  G  E  K  *  F  I  G  Q  N  *  Y  R  L  F  G  L  P  P  L  L  Q  *  R  T  K  S  E  I  N  T  L  F  H  S  F  S  I  S  Y  F  P  </first_frame>
            <second_frame>  K  I  F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  T  K  :  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V  L  A  A  L  E  K  S  N  L  L  G  K  I  D  T  G  C  L  V  C  L  P  F  Y  S  K  G  L  R  V  R  S  T  H  Y  S  I  P  F  P  F  H  I  F  L </second_frame>
            <third_frame>   K  S  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : Y  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  *  R  R :   *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L  Y  W  Q  L  W  R  K  V  I  Y  W  A  K  L  I  Q  A  V  W  F  A  S  P  S  T  V  K  D  *  E  *  D  Q  H  T  I  P  F  L  F  H  F  I  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11474" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8643" stop="8520"/>
                    <exon start="8453" stop="8416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNLLEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDEDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="11474" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8643" e_stop="8517"/>
            <exon e_start="8465" e_stop="8338"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.092" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.929"/>
          <exon-only e_score="0.867"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11474" e_stop="11367" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.092">
            <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620"/>
          </intron>
          <exon e_serial="7" e_score="0.929">
            <gDNA_exon_boundary e_start="8643" e_stop="8517" e_length="127"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8516" i_stop="8466" i_length="51"/>
          </intron>
          <exon e_serial="8" e_score="0.867">
            <gDNA_exon_boundary e_start="8465" e_stop="8338" e_length="128"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11474" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11456" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11449" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="8517"/>
              <exon start="8465" stop="8338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573026" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATG : ATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTC</gDNA_template>
            <first_frame> K  N  L  L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D   : D  D  D  E  D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L </first_frame>
            <second_frame>  K  I  F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  T  K  M  :  M  M  T  K  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S   </second_frame>
            <third_frame>   K  S  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : Y  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  *  R  R  * :   *  *  R  R  *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11474" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8643" stop="8517"/>
                    <exon start="8465" stop="8416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNLLEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDEDDDDEDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="11467" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8646" e_stop="8526"/>
            <exon e_start="8453" e_stop="8293"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="0.987"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.959"/>
          <exon-only e_score="0.870"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="11467" e_stop="11367" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="0.979">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10263" i_stop="8647" i_length="1617"/>
          </intron>
          <exon e_serial="7" e_score="0.959">
            <gDNA_exon_boundary e_start="8646" e_stop="8526" e_length="121"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8525" i_stop="8454" i_length="72"/>
          </intron>
          <exon e_serial="8" e_score="0.870">
            <gDNA_exon_boundary e_start="8453" e_stop="8293" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11467" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11441" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8646" stop="8526"/>
              <exon start="8453" stop="8293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11441" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8646" stop="8526"/>
              <exon start="8453" stop="8364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : CAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATG : ATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAAT</gDNA_template>
            <first_frame> F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   R  *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  :  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V  L  A  A  L  E  K  S  N  L  L  G  K   </first_frame>
            <second_frame>  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : S  D  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  * :   *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L  Y  W  Q  L  W  R  K  V  I  Y  W  A  K  </second_frame>
            <third_frame>   L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  Q  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D   : D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  I  G  S  F  G  E  K  *  F  I  G  Q  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11465" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8646" stop="8526"/>
                    <exon start="8453" stop="8416"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAQMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16113" PGL_stop="14217"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16113" e_stop="15361"/>
            <exon e_start="15211" e_stop="14324"/>
            <exon e_start="14228" e_stop="14217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.629" e_score="0.983"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16113" e_stop="15361" e_length="753"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.973">
            <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="15211" e_stop="14324" e_length="888"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.629">
            <gDNA_intron_boundary i_start="14323" i_stop="14229" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="14228" e_stop="14217" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16042" stop="15502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15794" stop="15361"/>
              <exon start="15211" stop="15092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15725" stop="15361"/>
              <exon start="15211" stop="14941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15703" stop="15361"/>
              <exon start="15211" stop="14723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15631" stop="15361"/>
              <exon start="15211" stop="14694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15587" stop="15361"/>
              <exon start="15211" stop="14997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15543" stop="15361"/>
              <exon start="15211" stop="14456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15543" stop="15361"/>
              <exon start="15211" stop="14806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15533" stop="15361"/>
              <exon start="15211" stop="14995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15456" stop="15361"/>
              <exon start="15211" stop="14777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15057" stop="14334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15057" stop="14418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14986" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14933" stop="14324"/>
              <exon start="14228" stop="14217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14889" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14736" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14599" stop="14334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434507" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG : GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTT : GAAGAAAACGAA</gDNA_template>
            <first_frame> L  T  Q  I  L  H  I  K  M  L  S  *  M  D  *  K  F  S  S  *  T  T  P  M  E  T  S  P  C  R  I  L  K  F  S  F  R  I  I  H  H  Q  T  T  I  R  K  R  N  H  H  T  S  L  L  L  S  L  Q  W  L  L  L  A  E  L  L  C  F  Q  F  S  V  S  *  F  S  G  G  G  E  G  E  K  I  F  I  Q  A  L  Q  S  H  H  G  S  L  C  Q  L  H  R  T  Q  P  K  G  Q  A  A  H  A  H  H  H  Y  H  P  I  C  A  D  T  F  Y  *  K  R  *  K  L  Q  Q  A  I  L  M  K  N  L  *  L  V  M  E  V  L  V  M  C  T  K  G  T  *  T  T  V  Q  P  *  L  Q  S  R  G  *  I  L  H  Q  S  K  E  S  A  S  S  K  Q  R  F  T  C  C  Q  S  *  G  M  C  I  W  C  P  *  L  V  I  V  M  I  R  M  R  *  S  W  F  M  I  T  W  L  M  E  L  F  V  I  T  C  T  K  L  I  M  L  H  F  H  G  R  N  A  S  R  F  A  L  A  Q  Q  K  D  C  I  I  S  I  Q  :  V  K  R  I  S  S  F  I  E  M  *  S  Q  P  T  F  Y  W  M  I  N  G  L  L  R  F  Q  I  L  G  Y  P  K  S  V  H  L  V  D  Q  E  K  L  M  L  A  L  L  *  K  E  A  L  D  I  *  I  L  N  T  I  S  D  N  S  *  Q  K  N  L  M  C  I  L  L  G  *  C  Y  S  K  C  C  V  L  D  Q  H  *  F  L  T  C  R  K  G  K  *  I  W  L  I  G  L  V  G  A  V  K  K  E  I  F  N  K  *  L  I  Q  I  W  K  D  K  S  R  Q  S  A  *  T  S  L  Q  K  Q  H  T  I  A  *  R  I  K  E  S  K  G  H  Q  *  M  T  L  F  G  I  W  N  L  Y  *  S  F  K  K  Q  L  I  I  E  V  T  K  W  N  *  T  V  I  R  L  A  R  L  S  H  *  L  *  M  I  I  P  I  Y  L  Q  M  K  D  S  R  N  F  Q  V  Q  M  K  L  E  K  N  T  Q  A  V  L  H  P  *  P  Q  L  V  M  T  N  *  R  V  K  P  F  S  L  R  F  *  I  H  R  D  D  E  I  V  T  T  S  M  I  N  I  T  Y  *  F  F  S  V  S  F  F  V  C  *  I  Y  V  L  I  I  C  G  *  *  T  E  A  I  I  Q  K  Y  I  S  Y  K  I  L  S  L  Y  F  :  E  E  N  E </first_frame>
            <second_frame>  *  P  R  F  C  I  S  K  C  Y  L  K  W  I  R  N  F  Q  V  E  R  L  Q  W  K  P  L  R  A  E  S  *  S  F  L  S  E  *  F  T  T  K  Q  Q  *  E  K  E  I  I  T  H  H  C  C  Y  H  C  S  G  C  Y  *  R  N  C  S  V  F  N  S  L  F  L  D  F  P  A  V  E  K  G  K  R  S  S  Y  K  R  Y  K  V  I  M  D  P  F  V  N  Y  I  G  L  N  P  K  D  R  R  L  T  L  I  I  T  T  I  R  S  V  P  T  L  F  T  R  R  D  K  N  C  N  R  Q  F  *  *  K  I  C  D  W  L  W  R  F  W  *  C  V  Q  R  V  H  R  Q  R  C  N  H  S  C  S  Q  E  V  E  S  F  I  K  A  R  S  P  R  V  R  N  R  D  S  H  A  V  K  A  K  A  C  A  S  G  V  L  N  W  L  L  *  *  *  E  *  D  D  L  G  L  *  L  H  G  *  W  N  S  S  *  S  L  V  Q  N  *  *  C  S  T  S  M  E  E  T  P  R  D  L  H  W  R  S  K  R  I  A  L  S  P  Y  R :   *  K  G  Y  H  H  S  S  R  C  E  V  N  Q  H  F  I  G  *  *  M  G  C  *  G  F  R  F  W  V  I  Q  N  R  S  T  *  W  I  R  K  N  S  C  *  H  C  C  E  R  K  L  W  I  S  R  S  *  I  L  *  A  T  T  V  D  R  K  I  *  C  V  F  F  W  G  S  A  I  R  S  V  V  C  *  T  S  I  N  S  *  H  A  E  R  A  S  E  F  G  *  L  G  L  *  E  L  *  K  R  K  S  S  T  N  N  *  S  K  F  G  R  T  N  R  A  R  V  L  K  Q  V  C  R  S  S  I  Q  L  L  E  G  S  R  S  P  K  A  I  N  E  *  R  C  L  E  F  G  I  Y  I  K  A  S  R  S  S  *  *  *  R  S  Q  N  G  I  E  Q  L  S  D  *  P  V  F  P  I  D  Y  E  *  S  Y  Q  Y  I  Y  R  *  R  I  R  G  I  F  R  F  K  *  S  W  R  K  I  H  K  Q  C  F  I  H  D  H  N  *  *  *  Q  I  E  E  *  N  H  F  L  *  D  F  E  S  I  G  T  M  R  L  L  Q  L  V  *  *  I  L  H  I  S  S  S  L  F  P  F  S  S  V  E  F  M  S  L  L  Y  V  D  D  E  L  K  P  L  F  R  S  I  *  A  I  K  Y  F  H  Y  I  L :   K  K  T   </second_frame>
            <third_frame>   N  P  D  S  A  Y  Q  N  A  I  L  N  G  L  E  I  F  K  L  N  D  S  N  G  N  L  S  V  P  N  P  E  V  F  F  P  N  N  S  P  P  N  N  N  K  K  K  K  S  S  H  I  I  A  V  I  T  A  V  A  V  I  S  G  I  A  L  F  S  I  L  C  F  L  I  F  R  R  W  R  R  G  K  D  L  H  T  S  V  T  K  S  S  W  I  P  L  S  I  T  S  D  S  T  Q  R  T  G  G  S  R  S  S  S  L  P  S  D  L  C  R  H  F  L  L  E  E  I  K  T  A  T  G  N  F  D  E  K  F  V  I  G  Y  G  G  F  G  N  V  Y  K  G  Y  I  D  N  G  A  T  I  V  A  V  K  R  L  N  P  S  S  K  Q  G  V  R  E  F  E  T  E  I  H  M  L  S  K  L  R  H  V  H  L  V  S  L  I  G  Y  C  D  D  K  N  E  M  I  L  V  Y  D  Y  M  A  N  G  T  L  R  D  H  L  Y  K  T  D  N  A  P  L  P  W  K  K  R  L  E  I  C  I  G  A  A  K  G  L  H  Y  L  H  T   : G  K  K  D  I  I  I  H  R  D  V  K  S  T  N  I  L  L  D  D  K  W  V  A  K  V  S  D  F  G  L  S  K  I  G  P  L  S  G  S  G  K  T  H  V  S  T  V  V  K  G  S  F  G  Y  L  D  P  E  Y  Y  K  R  Q  Q  L  T  E  K  S  D  V  Y  S  F  G  V  V  L  F  E  V  L  C  A  R  P  A  L  I  P  N  M  P  K  G  Q  V  N  L  A  D  W  A  C  R  S  C  K  K  G  N  L  Q  Q  I  I  D  P  N  L  E  G  Q  I  A  P  E  C  L  N  K  F  A  E  A  A  Y  N  C  L  K  D  Q  G  V  Q  R  P  S  M  N  D  V  V  W  N  L  E  F  I  L  K  L  Q  E  A  A  D  N  R  G  H  K  M  E  L  N  S  Y  P  T  S  P  S  F  P  L  I  M  N  D  H  T  N  I  S  T  D  E  G  F  E  E  F  S  G  S  N  E  V  G  E  K  Y  T  S  S  A  S  S  M  T  T  T  S  D  D  K  L  K  S  E  T  I  F  S  E  I  L  N  P  S  G  R  *  D  C  Y  N  *  Y  D  K  Y  Y  I  L  V  L  L  C  F  L  F  R  L  L  N  L  C  P  Y  Y  M  W  M  M  N  *  S  H  Y  S  E  V  Y  K  L  *  N  T  F  I  I  F   : *  R  K  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16111" stop="15361"/>
                    <exon start="15211" stop="14475"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPDSAYQNAILNGLEIFKLNDSNGNLSVPNPEVFFPNNSPPNNNKKKKSSHIIAVITAVAVISGIALFSILCFLIFRRWRRGKDLHTSVTKSSWIPLSITSDSTQRTGGSRSSSLPSDLCRHFLLEEIKTATGNFDEKFVIGYGGFGNVYKGYIDNGATIVAVKRLNPSSKQGVREFETEIHMLSKLRHVHLVSLIGYCDDKNEMILVYDYMANGTLRDHLYKTDNAPLPWKKRLEICIGAAKGLHYLHTGKKDIIIHRDVKSTNILLDDKWVAKVSDFGLSKIGPLSGSGKTHVSTVVKGSFGYLDPEYYKRQQLTEKSDVYSFGVVLFEVLCARPALIPNMPKGQVNLADWACRSCKKGNLQQIIDPNLEGQIAPECLNKFAEAAYNCLKDQGVQRPSMNDVVWNLEFILKLQEAADNRGHKMELNSYPTSPSFPLIMNDHTNISTDEGFEEFSGSNEVGEKYTSSASSMTTTSDDKLKSETIFSEILNPSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="16113" e_stop="15361"/>
            <exon e_start="15211" e_stop="14314"/>
            <exon e_start="14228" e_stop="14217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.629" e_score="0.983"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16113" e_stop="15361" e_length="753"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.973">
            <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="15211" e_stop="14314" e_length="898"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.629">
            <gDNA_intron_boundary i_start="14313" i_stop="14229" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="0.750">
            <gDNA_exon_boundary e_start="14228" e_stop="14217" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16042" stop="15502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15794" stop="15361"/>
              <exon start="15211" stop="15092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15725" stop="15361"/>
              <exon start="15211" stop="14941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15703" stop="15361"/>
              <exon start="15211" stop="14723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15631" stop="15361"/>
              <exon start="15211" stop="14694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15587" stop="15361"/>
              <exon start="15211" stop="14997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15543" stop="15361"/>
              <exon start="15211" stop="14456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15543" stop="15361"/>
              <exon start="15211" stop="14806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15533" stop="15361"/>
              <exon start="15211" stop="14995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15456" stop="15361"/>
              <exon start="15211" stop="14777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15057" stop="14334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15057" stop="14418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14986" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14890" stop="14314"/>
              <exon start="14228" stop="14217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257061" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14889" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14736" stop="14329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14599" stop="14334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434507" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG : GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTGAA : GAAGAAAACGAA</gDNA_template>
            <first_frame> L  T  Q  I  L  H  I  K  M  L  S  *  M  D  *  K  F  S  S  *  T  T  P  M  E  T  S  P  C  R  I  L  K  F  S  F  R  I  I  H  H  Q  T  T  I  R  K  R  N  H  H  T  S  L  L  L  S  L  Q  W  L  L  L  A  E  L  L  C  F  Q  F  S  V  S  *  F  S  G  G  G  E  G  E  K  I  F  I  Q  A  L  Q  S  H  H  G  S  L  C  Q  L  H  R  T  Q  P  K  G  Q  A  A  H  A  H  H  H  Y  H  P  I  C  A  D  T  F  Y  *  K  R  *  K  L  Q  Q  A  I  L  M  K  N  L  *  L  V  M  E  V  L  V  M  C  T  K  G  T  *  T  T  V  Q  P  *  L  Q  S  R  G  *  I  L  H  Q  S  K  E  S  A  S  S  K  Q  R  F  T  C  C  Q  S  *  G  M  C  I  W  C  P  *  L  V  I  V  M  I  R  M  R  *  S  W  F  M  I  T  W  L  M  E  L  F  V  I  T  C  T  K  L  I  M  L  H  F  H  G  R  N  A  S  R  F  A  L  A  Q  Q  K  D  C  I  I  S  I  Q  :  V  K  R  I  S  S  F  I  E  M  *  S  Q  P  T  F  Y  W  M  I  N  G  L  L  R  F  Q  I  L  G  Y  P  K  S  V  H  L  V  D  Q  E  K  L  M  L  A  L  L  *  K  E  A  L  D  I  *  I  L  N  T  I  S  D  N  S  *  Q  K  N  L  M  C  I  L  L  G  *  C  Y  S  K  C  C  V  L  D  Q  H  *  F  L  T  C  R  K  G  K  *  I  W  L  I  G  L  V  G  A  V  K  K  E  I  F  N  K  *  L  I  Q  I  W  K  D  K  S  R  Q  S  A  *  T  S  L  Q  K  Q  H  T  I  A  *  R  I  K  E  S  K  G  H  Q  *  M  T  L  F  G  I  W  N  L  Y  *  S  F  K  K  Q  L  I  I  E  V  T  K  W  N  *  T  V  I  R  L  A  R  L  S  H  *  L  *  M  I  I  P  I  Y  L  Q  M  K  D  S  R  N  F  Q  V  Q  M  K  L  E  K  N  T  Q  A  V  L  H  P  *  P  Q  L  V  M  T  N  *  R  V  K  P  F  S  L  R  F  *  I  H  R  D  D  E  I  V  T  T  S  M  I  N  I  T  Y  *  F  F  S  V  S  F  F  V  C  *  I  Y  V  L  I  I  C  G  *  *  T  E  A  I  I  Q  K  Y  I  S  Y  K  I  L  S  L  Y  F  V  E  *   : R  R  K  R  </first_frame>
            <second_frame>  *  P  R  F  C  I  S  K  C  Y  L  K  W  I  R  N  F  Q  V  E  R  L  Q  W  K  P  L  R  A  E  S  *  S  F  L  S  E  *  F  T  T  K  Q  Q  *  E  K  E  I  I  T  H  H  C  C  Y  H  C  S  G  C  Y  *  R  N  C  S  V  F  N  S  L  F  L  D  F  P  A  V  E  K  G  K  R  S  S  Y  K  R  Y  K  V  I  M  D  P  F  V  N  Y  I  G  L  N  P  K  D  R  R  L  T  L  I  I  T  T  I  R  S  V  P  T  L  F  T  R  R  D  K  N  C  N  R  Q  F  *  *  K  I  C  D  W  L  W  R  F  W  *  C  V  Q  R  V  H  R  Q  R  C  N  H  S  C  S  Q  E  V  E  S  F  I  K  A  R  S  P  R  V  R  N  R  D  S  H  A  V  K  A  K  A  C  A  S  G  V  L  N  W  L  L  *  *  *  E  *  D  D  L  G  L  *  L  H  G  *  W  N  S  S  *  S  L  V  Q  N  *  *  C  S  T  S  M  E  E  T  P  R  D  L  H  W  R  S  K  R  I  A  L  S  P  Y  R :   *  K  G  Y  H  H  S  S  R  C  E  V  N  Q  H  F  I  G  *  *  M  G  C  *  G  F  R  F  W  V  I  Q  N  R  S  T  *  W  I  R  K  N  S  C  *  H  C  C  E  R  K  L  W  I  S  R  S  *  I  L  *  A  T  T  V  D  R  K  I  *  C  V  F  F  W  G  S  A  I  R  S  V  V  C  *  T  S  I  N  S  *  H  A  E  R  A  S  E  F  G  *  L  G  L  *  E  L  *  K  R  K  S  S  T  N  N  *  S  K  F  G  R  T  N  R  A  R  V  L  K  Q  V  C  R  S  S  I  Q  L  L  E  G  S  R  S  P  K  A  I  N  E  *  R  C  L  E  F  G  I  Y  I  K  A  S  R  S  S  *  *  *  R  S  Q  N  G  I  E  Q  L  S  D  *  P  V  F  P  I  D  Y  E  *  S  Y  Q  Y  I  Y  R  *  R  I  R  G  I  F  R  F  K  *  S  W  R  K  I  H  K  Q  C  F  I  H  D  H  N  *  *  *  Q  I  E  E  *  N  H  F  L  *  D  F  E  S  I  G  T  M  R  L  L  Q  L  V  *  *  I  L  H  I  S  S  S  L  F  P  F  S  S  V  E  F  M  S  L  L  Y  V  D  D  E  L  K  P  L  F  R  S  I  *  A  I  K  Y  F  H  Y  I  L  L  S  E  :  E  E  N  E </second_frame>
            <third_frame>   N  P  D  S  A  Y  Q  N  A  I  L  N  G  L  E  I  F  K  L  N  D  S  N  G  N  L  S  V  P  N  P  E  V  F  F  P  N  N  S  P  P  N  N  N  K  K  K  K  S  S  H  I  I  A  V  I  T  A  V  A  V  I  S  G  I  A  L  F  S  I  L  C  F  L  I  F  R  R  W  R  R  G  K  D  L  H  T  S  V  T  K  S  S  W  I  P  L  S  I  T  S  D  S  T  Q  R  T  G  G  S  R  S  S  S  L  P  S  D  L  C  R  H  F  L  L  E  E  I  K  T  A  T  G  N  F  D  E  K  F  V  I  G  Y  G  G  F  G  N  V  Y  K  G  Y  I  D  N  G  A  T  I  V  A  V  K  R  L  N  P  S  S  K  Q  G  V  R  E  F  E  T  E  I  H  M  L  S  K  L  R  H  V  H  L  V  S  L  I  G  Y  C  D  D  K  N  E  M  I  L  V  Y  D  Y  M  A  N  G  T  L  R  D  H  L  Y  K  T  D  N  A  P  L  P  W  K  K  R  L  E  I  C  I  G  A  A  K  G  L  H  Y  L  H  T   : G  K  K  D  I  I  I  H  R  D  V  K  S  T  N  I  L  L  D  D  K  W  V  A  K  V  S  D  F  G  L  S  K  I  G  P  L  S  G  S  G  K  T  H  V  S  T  V  V  K  G  S  F  G  Y  L  D  P  E  Y  Y  K  R  Q  Q  L  T  E  K  S  D  V  Y  S  F  G  V  V  L  F  E  V  L  C  A  R  P  A  L  I  P  N  M  P  K  G  Q  V  N  L  A  D  W  A  C  R  S  C  K  K  G  N  L  Q  Q  I  I  D  P  N  L  E  G  Q  I  A  P  E  C  L  N  K  F  A  E  A  A  Y  N  C  L  K  D  Q  G  V  Q  R  P  S  M  N  D  V  V  W  N  L  E  F  I  L  K  L  Q  E  A  A  D  N  R  G  H  K  M  E  L  N  S  Y  P  T  S  P  S  F  P  L  I  M  N  D  H  T  N  I  S  T  D  E  G  F  E  E  F  S  G  S  N  E  V  G  E  K  Y  T  S  S  A  S  S  M  T  T  T  S  D  D  K  L  K  S  E  T  I  F  S  E  I  L  N  P  S  G  R  *  D  C  Y  N  *  Y  D  K  Y  Y  I  L  V  L  L  C  F  L  F  R  L  L  N  L  C  P  Y  Y  M  W  M  M  N  *  S  H  Y  S  E  V  Y  K  L  *  N  T  F  I  I  F  C  *  V  K :   K  K  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16111" stop="15361"/>
                    <exon start="15211" stop="14475"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPDSAYQNAILNGLEIFKLNDSNGNLSVPNPEVFFPNNSPPNNNKKKKSSHIIAVITAVAVISGIALFSILCFLIFRRWRRGKDLHTSVTKSSWIPLSITSDSTQRTGGSRSSSLPSDLCRHFLLEEIKTATGNFDEKFVIGYGGFGNVYKGYIDNGATIVAVKRLNPSSKQGVREFETEIHMLSKLRHVHLVSLIGYCDDKNEMILVYDYMANGTLRDHLYKTDNAPLPWKKRLEICIGAAKGLHYLHTGKKDIIIHRDVKSTNILLDDKWVAKVSDFGLSKIGPLSGSGKTHVSTVVKGSFGYLDPEYYKRQQLTEKSDVYSFGVVLFEVLCARPALIPNMPKGQVNLADWACRSCKKGNLQQIIDPNLEGQIAPECLNKFAEAAYNCLKDQGVQRPSMNDVVWNLEFILKLQEAADNRGHKMELNSYPTSPSFPLIMNDHTNISTDEGFEEFSGSNEVGEKYTSSASSMTTTSDDKLKSETIFSEILNPSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16113" e_stop="15354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16113" e_stop="15354" e_length="760"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16042" stop="15502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16035" stop="15354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484253" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACG</gDNA_template>
            <first_frame> L  T  Q  I  L  H  I  K  M  L  S  *  M  D  *  K  F  S  S  *  T  T  P  M  E  T  S  P  C  R  I  L  K  F  S  F  R  I  I  H  H  Q  T  T  I  R  K  R  N  H  H  T  S  L  L  L  S  L  Q  W  L  L  L  A  E  L  L  C  F  Q  F  S  V  S  *  F  S  G  G  G  E  G  E  K  I  F  I  Q  A  L  Q  S  H  H  G  S  L  C  Q  L  H  R  T  Q  P  K  G  Q  A  A  H  A  H  H  H  Y  H  P  I  C  A  D  T  F  Y  *  K  R  *  K  L  Q  Q  A  I  L  M  K  N  L  *  L  V  M  E  V  L  V  M  C  T  K  G  T  *  T  T  V  Q  P  *  L  Q  S  R  G  *  I  L  H  Q  S  K  E  S  A  S  S  K  Q  R  F  T  C  C  Q  S  *  G  M  C  I  W  C  P  *  L  V  I  V  M  I  R  M  R  *  S  W  F  M  I  T  W  L  M  E  L  F  V  I  T  C  T  K  L  I  M  L  H  F  H  G  R  N  A  S  R  F  A  L  A  Q  Q  K  D  C  I  I  S  I  Q  V  Y  </first_frame>
            <second_frame>  *  P  R  F  C  I  S  K  C  Y  L  K  W  I  R  N  F  Q  V  E  R  L  Q  W  K  P  L  R  A  E  S  *  S  F  L  S  E  *  F  T  T  K  Q  Q  *  E  K  E  I  I  T  H  H  C  C  Y  H  C  S  G  C  Y  *  R  N  C  S  V  F  N  S  L  F  L  D  F  P  A  V  E  K  G  K  R  S  S  Y  K  R  Y  K  V  I  M  D  P  F  V  N  Y  I  G  L  N  P  K  D  R  R  L  T  L  I  I  T  T  I  R  S  V  P  T  L  F  T  R  R  D  K  N  C  N  R  Q  F  *  *  K  I  C  D  W  L  W  R  F  W  *  C  V  Q  R  V  H  R  Q  R  C  N  H  S  C  S  Q  E  V  E  S  F  I  K  A  R  S  P  R  V  R  N  R  D  S  H  A  V  K  A  K  A  C  A  S  G  V  L  N  W  L  L  *  *  *  E  *  D  D  L  G  L  *  L  H  G  *  W  N  S  S  *  S  L  V  Q  N  *  *  C  S  T  S  M  E  E  T  P  R  D  L  H  W  R  S  K  R  I  A  L  S  P  Y  R  Y  T </second_frame>
            <third_frame>   N  P  D  S  A  Y  Q  N  A  I  L  N  G  L  E  I  F  K  L  N  D  S  N  G  N  L  S  V  P  N  P  E  V  F  F  P  N  N  S  P  P  N  N  N  K  K  K  K  S  S  H  I  I  A  V  I  T  A  V  A  V  I  S  G  I  A  L  F  S  I  L  C  F  L  I  F  R  R  W  R  R  G  K  D  L  H  T  S  V  T  K  S  S  W  I  P  L  S  I  T  S  D  S  T  Q  R  T  G  G  S  R  S  S  S  L  P  S  D  L  C  R  H  F  L  L  E  E  I  K  T  A  T  G  N  F  D  E  K  F  V  I  G  Y  G  G  F  G  N  V  Y  K  G  Y  I  D  N  G  A  T  I  V  A  V  K  R  L  N  P  S  S  K  Q  G  V  R  E  F  E  T  E  I  H  M  L  S  K  L  R  H  V  H  L  V  S  L  I  G  Y  C  D  D  K  N  E  M  I  L  V  Y  D  Y  M  A  N  G  T  L  R  D  H  L  Y  K  T  D  N  A  P  L  P  W  K  K  R  L  E  I  C  I  G  A  A  K  G  L  H  Y  L  H  T  G  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16111" stop="15356"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPDSAYQNAILNGLEIFKLNDSNGNLSVPNPEVFFPNNSPPNNNKKKKSSHIIAVITAVAVISGIALFSILCFLIFRRWRRGKDLHTSVTKSSWIPLSITSDSTQRTGGSRSSSLPSDLCRHFLLEEIKTATGNFDEKFVIGYGGFGNVYKGYIDNGATIVAVKRLNPSSKQGVREFETEIHMLSKLRHVHLVSLIGYCDDKNEMILVYDYMANGTLRDHLYKTDNAPLPWKKRLEICIGAAKGLHYLHTGI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="14320" PGL_stop="15160"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14320" e_stop="15160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="14320" e_stop="15160" e_length="841"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14320" stop="14887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421964" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14339" stop="15160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426893" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14379" stop="15096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421980" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAAAATATAATGAAAGTATTTTATAGCTTATATACTTCTGAATAATGGCTTCAGTTCATCATCCACATATAATAAGGACATAAATTCAACAGACGAAAAAGGAAACAGAGAAGAACTAATATGTAATATTTATCATACTAGTTGTAACAATCTCATCGTCCCGATGGATTCAAAATCTCAGAGAAAATGGTTTCACTCTTCAATTTGTCATCACTAGTTGTGGTCATGGATGAAGCACTGCTTGTGTATTTTTCTCCAACTTCATTTGAACCTGAAAATTCCTCGAATCCTTCATCTGTAGATATATTGGTATGATCATTCATAATCAATGGGAAAGACGGGCTAGTCGGATAACTGTTCAATTCCATTTTGTGACCTCTATTATCAGCTGCTTCTTGAAGCTTTAATATAAATTCCAAATTCCAAACAACGTCATTCATTGATGGCCTTTGGACTCCTTGATCCTTCAAGCAATTGTATGCTGCTTCTGCAAACTTGTTTAAGCACTCTGGCGCGATTTGTCCTTCCAAATTTGGATCAATTATTTGTTGAAGATTTCCTTTTTTACAGCTCCTACAAGCCCAATCAGCCAAATTCACTTGCCCTTTCGGCATGTTAGGAATTAATGCTGGTCTAGCACACAACACTTCGAATAGCACTACCCCAAAAGAATACACATCAGATTTTTCTGTCAACTGTTGTCGCTTATAGTATTCAGGATCTAGATATCCAAAGCTTCCTTTCACAACAGTGCTAACATGAGTTTTTCCTGATCCACTAAGTGGACCGATTTTGGATAACCCAAAATCTGAAACCTTAGCAACCCATTTATCATCCA</gDNA_template>
            <first_frame> Q  Q  N  I  M  K  V  F  Y  S  L  Y  T  S  E  *  W  L  Q  F  I  I  H  I  *  *  G  H  K  F  N  R  R  K  R  K  Q  R  R  T  N  M  *  Y  L  S  Y  *  L  *  Q  S  H  R  P  D  G  F  K  I  S  E  K  M  V  S  L  F  N  L  S  S  L  V  V  V  M  D  E  A  L  L  V  Y  F  S  P  T  S  F  E  P  E  N  S  S  N  P  S  S  V  D  I  L  V  *  S  F  I  I  N  G  K  D  G  L  V  G  *  L  F  N  S  I  L  *  P  L  L  S  A  A  S  *  S  F  N  I  N  S  K  F  Q  T  T  S  F  I  D  G  L  W  T  P  *  S  F  K  Q  L  Y  A  A  S  A  N  L  F  K  H  S  G  A  I  C  P  S  K  F  G  S  I  I  C  *  R  F  P  F  L  Q  L  L  Q  A  Q  S  A  K  F  T  C  P  F  G  M  L  G  I  N  A  G  L  A  H  N  T  S  N  S  T  T  P  K  E  Y  T  S  D  F  S  V  N  C  C  R  L  *  Y  S  G  S  R  Y  P  K  L  P  F  T  T  V  L  T  *  V  F  P  D  P  L  S  G  P  I  L  D  N  P  K  S  E  T  L  A  T  H  L  S  S  </first_frame>
            <second_frame>  N  K  I  *  *  K  Y  F  I  A  Y  I  L  L  N  N  G  F  S  S  S  S  T  Y  N  K  D  I  N  S  T  D  E  K  G  N  R  E  E  L  I  C  N  I  Y  H  T  S  C  N  N  L  I  V  P  M  D  S  K  S  Q  R  K  W  F  H  S  S  I  C  H  H  *  L  W  S  W  M  K  H  C  L  C  I  F  L  Q  L  H  L  N  L  K  I  P  R  I  L  H  L  *  I  Y  W  Y  D  H  S  *  S  M  G  K  T  G  *  S  D  N  C  S  I  P  F  C  D  L  Y  Y  Q  L  L  L  E  A  L  I  *  I  P  N  S  K  Q  R  H  S  L  M  A  F  G  L  L  D  P  S  S  N  C  M  L  L  L  Q  T  C  L  S  T  L  A  R  F  V  L  P  N  L  D  Q  L  F  V  E  D  F  L  F  Y  S  S  Y  K  P  N  Q  P  N  S  L  A  L  S  A  C  *  E  L  M  L  V  *  H  T  T  L  R  I  A  L  P  Q  K  N  T  H  Q  I  F  L  S  T  V  V  A  Y  S  I  Q  D  L  D  I  Q  S  F  L  S  Q  Q  C  *  H  E  F  F  L  I  H  *  V  D  R  F  W  I  T  Q  N  L  K  P  *  Q  P  I  Y  H  P </second_frame>
            <third_frame>   T  K  Y  N  E  S  I  L  *  L  I  Y  F  *  I  M  A  S  V  H  H  P  H  I  I  R  T  *  I  Q  Q  T  K  K  E  T  E  K  N  *  Y  V  I  F  I  I  L  V  V  T  I  S  S  S  R  W  I  Q  N  L  R  E  N  G  F  T  L  Q  F  V  I  T  S  C  G  H  G  *  S  T  A  C  V  F  F  S  N  F  I  *  T  *  K  F  L  E  S  F  I  C  R  Y  I  G  M  I  I  H  N  Q  W  E  R  R  A  S  R  I  T  V  Q  F  H  F  V  T  S  I  I  S  C  F  L  K  L  *  Y  K  F  Q  I  P  N  N  V  I  H  *  W  P  L  D  S  L  I  L  Q  A  I  V  C  C  F  C  K  L  V  *  A  L  W  R  D  L  S  F  Q  I  W  I  N  Y  L  L  K  I  S  F  F  T  A  P  T  S  P  I  S  Q  I  H  L  P  F  R  H  V  R  N  *  C  W  S  S  T  Q  H  F  E  *  H  Y  P  K  R  I  H  I  R  F  F  C  Q  L  L  S  L  I  V  F  R  I  *  I  S  K  A  S  F  H  N  S  A  N  M  S  F  S  *  S  T  K  W  T  D  F  G  *  P  K  I  *  N  L  S  N  P  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14735" stop="14941"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPNSKQRHSLMAFGLLDPSSNCMLLLQTCLSTLARFVLPNLDQLFVEDFLFYSSYKPNQPNSLALSAC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14336" stop="14539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYFIAYILLNNGFSSSSTYNKDINSTDEKGNREELICNIYHTSCNNLIVPMDSKSQRKWFHSSICHH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="16294" PGL_stop="17010"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16294" e_stop="17010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="16294" e_stop="17010" e_length="717"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16294" stop="17010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605568" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACAAAAATGGAGCCTGAAAAGATACAAGAAACCAGAGTTTAGAGGGAATTCCCAATACAGTCCCGAGCTGTAATTGTCCATAATCCTCGAGGTTGTGTAAACTATGGTTGGCGCAGTATAATTCGGGGTTTCAGAAGTGTAAGTGATGTTGGCATCAGGAAAATGAGGAGTTTGATAGCCTAATCCAACAACAAATGCATTATCTGAATCCCATACACGATACATCCCTGTATCCTCTGTGCTTTCAACTAAATTGCCTCCCACGTTCAGCCTGTACAATGTTTCAAGAGCAGTGCTATTATTGATGTTATATGGAATAGTATTCCCAGTCAATTTGACGTCTCCATGGATGTAAAGATCAGTTGGCATAGAAAGTATCTCAATCCCATTAACAAAAGCATAAGAGTTTGGTGAAGGAGAAAAGGTTAATTTGAGCATCTGTGTTTCATCAACATTGATGACATATTCTTTTTGAACAGCTTTAGTACTACTTGCAGAGACTGTGAAGAAAGCACTGAAGTTACTCAAGAGGGTTAAATTATTAGCTGTGACGGAGAAAAAAGAATCAGCTTTGTTAAAACCGGAGTAATTGGCAGGGTAGAAATAGAGACGGAGGAATATTGTGCCAGGGGTAACACGGAAAGTATAGGTGAATTGAGATCTCATAATACGAATACCAGTCGTATAAGGAATTCTATTGACAGAAGGATCTTGTT</gDNA_template>
            <first_frame> H  K  N  G  A  *  K  D  T  R  N  Q  S  L  E  G  I  P  N  T  V  P  S  C  N  C  P  *  S  S  R  L  C  K  L  W  L  A  Q  Y  N  S  G  F  Q  K  C  K  *  C  W  H  Q  E  N  E  E  F  D  S  L  I  Q  Q  Q  M  H  Y  L  N  P  I  H  D  T  S  L  Y  P  L  C  F  Q  L  N  C  L  P  R  S  A  C  T  M  F  Q  E  Q  C  Y  Y  *  C  Y  M  E  *  Y  S  Q  S  I  *  R  L  H  G  C  K  D  Q  L  A  *  K  V  S  Q  S  H  *  Q  K  H  K  S  L  V  K  E  K  R  L  I  *  A  S  V  F  H  Q  H  *  *  H  I  L  F  E  Q  L  *  Y  Y  L  Q  R  L  *  R  K  H  *  S  Y  S  R  G  L  N  Y  *  L  *  R  R  K  K  N  Q  L  C  *  N  R  S  N  W  Q  G  R  N  R  D  G  G  I  L  C  Q  G  *  H  G  K  Y  R  *  I  E  I  S  *  Y  E  Y  Q  S  Y  K  E  F  Y  *  Q  K  D  L  V </first_frame>
            <second_frame>  T  K  M  E  P  E  K  I  Q  E  T  R  V  *  R  E  F  P  I  Q  S  R  A  V  I  V  H  N  P  R  G  C  V  N  Y  G  W  R  S  I  I  R  G  F  R  S  V  S  D  V  G  I  R  K  M  R  S  L  I  A  *  S  N  N  K  C  I  I  *  I  P  Y  T  I  H  P  C  I  L  C  A  F  N  *  I  A  S  H  V  Q  P  V  Q  C  F  K  S  S  A  I  I  D  V  I  W  N  S  I  P  S  Q  F  D  V  S  M  D  V  K  I  S  W  H  R  K  Y  L  N  P  I  N  K  S  I  R  V  W  *  R  R  K  G  *  F  E  H  L  C  F  I  N  I  D  D  I  F  F  L  N  S  F  S  T  T  C  R  D  C  E  E  S  T  E  V  T  Q  E  G  *  I  I  S  C  D  G  E  K  R  I  S  F  V  K  T  G  V  I  G  R  V  E  I  E  T  E  E  Y  C  A  R  G  N  T  E  S  I  G  E  L  R  S  H  N  T  N  T  S  R  I  R  N  S  I  D  R  R  I  L   </second_frame>
            <third_frame>   Q  K  W  S  L  K  R  Y  K  K  P  E  F  R  G  N  S  Q  Y  S  P  E  L  *  L  S  I  I  L  E  V  V  *  T  M  V  G  A  V  *  F  G  V  S  E  V  *  V  M  L  A  S  G  K  *  G  V  *  *  P  N  P  T  T  N  A  L  S  E  S  H  T  R  Y  I  P  V  S  S  V  L  S  T  K  L  P  P  T  F  S  L  Y  N  V  S  R  A  V  L  L  L  M  L  Y  G  I  V  F  P  V  N  L  T  S  P  W  M  *  R  S  V  G  I  E  S  I  S  I  P  L  T  K  A  *  E  F  G  E  G  E  K  V  N  L  S  I  C  V  S  S  T  L  M  T  Y  S  F  *  T  A  L  V  L  L  A  E  T  V  K  K  A  L  K  L  L  K  R  V  K  L  L  A  V  T  E  K  K  E  S  A  L  L  K  P  E  *  L  A  G  *  K  *  R  R  R  N  I  V  P  G  V  T  R  K  V  *  V  N  *  D  L  I  I  R  I  P  V  V  *  G  I  L  L  T  E  G  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="17289" PGL_stop="16388"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17289" e_stop="16388"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17289" e_stop="16388" e_length="902"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17289" stop="16545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17279" stop="16850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17276" stop="16781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17272" stop="16782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17241" stop="16612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17229" stop="16435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17229" stop="16640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17225" stop="16424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17225" stop="16458"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17224" stop="16389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17223" stop="16800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17220" stop="16574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16968" stop="16556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16898" stop="16388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278164" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACA</gDNA_template>
            <first_frame> L  C  I  I  N  C  S  L  E  Q  L  I  S  P  Y  T  N  S  P  W  Q  P  S  L  Y  F  S  F  S  S  Y  N  S  *  P  P  L  L  L  P  R  R  H  R  I  T  P  Q  S  S  S  C  L  T  V  A  H  N  Q  P  S  P  M  I  L  A  V  D  G  I  L  I  L  T  F  Q  I  S  Y  L  P  T  F  Q  A  Y  P  Q  Q  P  Q  L  L  N  K  I  L  L  S  I  E  F  L  I  R  L  V  F  V  L  *  D  L  N  S  P  I  L  S  V  L  P  L  A  Q  Y  S  S  V  S  I  S  T  L  P  I  T  P  V  L  T  K  L  I  L  F  S  P  S  Q  L  I  I  *  P  S  *  V  T  S  V  L  S  S  Q  S  L  Q  V  V  L  K  L  F  K  K  N  M  S  S  M  L  M  K  H  R  C  S  N  *  P  F  L  L  H  Q  T  L  M  L  L  L  M  G  L  R  Y  F  L  C  Q  L  I  F  T  S  M  E  T  S  N  *  L  G  I  L  F  H  I  T  S  I  I  A  L  L  L  K  H  C  T  G  *  T  W  E  A  I  *  L  K  A  Q  R  I  Q  G  C  I  V  Y  G  I  Q  I  M  H  L  L  L  D  *  A  I  K  L  L  I  F  L  M  P  T  S  L  T  L  L  K  P  R  I  I  L  R  Q  P  *  F  T   </first_frame>
            <second_frame>  C  V  *  L  I  V  P  W  N  S  *  Y  L  L  T  P  T  P  H  G  N  H  H  F  T  F  L  S  L  L  T  T  H  N  R  H  Y  C  Y  H  V  A  T  V  *  R  H  S  L  R  L  A  *  L  W  R  T  I  S  H  H  R  *  Y  W  P  S  M  G  Y  *  Y  S  L  S  K  F  L  T  F  R  L  F  K  H  I  H  N  S  H  S  S  *  T  R  S  F  C  Q  *  N  S  L  Y  D  W  Y  S  Y  Y  E  I  S  I  H  L  Y  F  P  C  Y  P  W  H  N  I  P  P  S  L  F  L  P  C  Q  L  L  R  F  *  Q  S  *  F  F  F  L  R  H  S  *  *  F  N  P  L  E  *  L  Q  C  F  L  H  S  L  C  K  *  Y  *  S  C  S  K  R  I  C  H  Q  C  *  *  N  T  D  A  Q  I  N  L  F  S  F  T  K  L  L  C  F  C  *  W  D  *  D  T  F  Y  A  N  *  S  L  H  P  W  R  R  Q  I  D  W  E  Y  Y  S  I  *  H  Q  *  *  H  C  S  *  N  I  V  Q  A  E  R  G  R  Q  F  S  *  K  H  R  G  Y  R  D  V  S  C  M  G  F  R  *  C  I  C  C  W  I  R  L  S  N  S  S  F  S  *  C  Q  H  H  L  H  F  *  N  P  E  L  Y  C  A  N  H  S  L  H  </second_frame>
            <third_frame>   V  Y  N  *  L  F  L  G  T  A  N  I  S  L  H  Q  L  P  M  A  T  I  T  L  L  F  F  L  F  L  Q  L  I  T  A  T  I  A  T  T  S  P  P  Y  N  A  T  V  F  V  L  L  N  C  G  A  Q  S  A  I  T  D  D  T  G  R  R  W  D  T  D  T  H  F  P  N  F  L  P  S  D  F  S  S  I  S  T  T  A  T  A  L  E  Q  D  P  S  V  N  R  I  P  Y  T  T  G  I  R  I  M  R  S  Q  F  T  Y  T  F  R  V  T  P  G  T  I  F  L  R  L  Y  F  Y  P  A  N  Y  S  G  F  N  K  A  D  S  F  F  S  V  T  A  N  N  L  T  L  L  S  N  F  S  A  F  F  T  V  S  A  S  S  T  K  A  V  Q  K  E  Y  V  I  N  V  D  E  T  Q  M  L  K  L  T  F  S  P  S  P  N  S  Y  A  F  V  N  G  I  E  I  L  S  M  P  T  D  L  Y  I  H  G  D  V  K  L  T  G  N  T  I  P  Y  N  I  N  N  S  T  A  L  E  T  L  Y  R  L  N  V  G  G  N  L  V  E  S  T  E  D  T  G  M  Y  R  V  W  D  S  D  N  A  F  V  V  G  L  G  Y  Q  T  P  H  F  P  D  A  N  I  T  Y  T  S  E  T  P  N  Y  T  A  P  T  I  V  Y  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17275" stop="16388"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFLGTANISLHQLPMATITLLFFLFLQLITATIATTSPPYNATVFVLLNCGAQSAITDDTGRRWDTDTHFPNFLPSDFSSISTTATALEQDPSVNRIPYTTGIRIMRSQFTYTFRVTPGTIFLRLYFYPANYSGFNKADSFFSVTANNLTLLSNFSAFFTVSASSTKAVQKEYVINVDETQMLKLTFSPSPNSYAFVNGIEILSMPTDLYIHGDVKLTGNTIPYNINNSTALETLYRLNVGGNLVESTEDTGMYRVWDSDNAFVVGLGYQTPHFPDANITYTSETPNYTAPTIVYT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="22518" PGL_stop="21931"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22518" e_stop="21931"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="22518" e_stop="21931" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22518" stop="21993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22518" stop="22017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22512" stop="22024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22512" stop="22024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22511" stop="22023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22507" stop="22094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22503" stop="22009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22502" stop="22020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291911" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22499" stop="21931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22484" stop="22017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222487" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22356" stop="22021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222421" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATCAATGAGGATGACGATGATGATGCTCCTTGTGTTACTTGTAACCGTGATAAAGGTGGAATCGGTATCAGAATGTAACGGGACAAGCAGCAGCATAGATGCTTGTCTTCGGGACGACGATGAATTGTTGATGGAATCAGAAACAAGTAGTAGGATTCTTCTTGCTGCAGGTGGTAATGCTAGATCAGGAAGATTAAATTACAAGGCCACAGGGAAACCAGAGATATGTAATGAACAAATAGTTGGTAATTGCATCAATAATAAGAACGTTAAGGCAACACACTGCAACTTTGGTACCCGCTGCAAACGTGATGTAATATCCTCCTAAATATTTTATTTTATGTACAACTCTCCAAGGGTGTCGTTCGCTTTATTTATTTGAACCAATAACATGATCTACTCTTGTTCAAGAAACGAACTACTTGTTTTTTTTTTACATTTTGTATGTATTTATTTATTGTCTCTTTAAGAACTAAATGGCTTGATTTTTTATCGTAAATTTTAGGTGTTTTCGTTTGAACAGTATGCTTTATTATGTCTTCAAAGTATTACTATGATTTTCGTTAGAAATAACAAAATCCTGA</gDNA_template>
            <first_frame> *  N  Q  *  G  *  R  *  *  C  S  L  C  Y  L  *  P  *  *  R  W  N  R  Y  Q  N  V  T  G  Q  A  A  A  *  M  L  V  F  G  T  T  M  N  C  *  W  N  Q  K  Q  V  V  G  F  F  L  L  Q  V  V  M  L  D  Q  E  D  *  I  T  R  P  Q  G  N  Q  R  Y  V  M  N  K  *  L  V  I  A  S  I  I  R  T  L  R  Q  H  T  A  T  L  V  P  A  A  N  V  M  *  Y  P  P  K  Y  F  I  L  C  T  T  L  Q  G  C  R  S  L  Y  L  F  E  P  I  T  *  S  T  L  V  Q  E  T  N  Y  L  F  F  F  Y  I  L  Y  V  F  I  Y  C  L  F  K  N  *  M  A  *  F  F  I  V  N  F  R  C  F  R  L  N  S  M  L  Y  Y  V  F  K  V  L  L  *  F  S  L  E  I  T  K  S  * </first_frame>
            <second_frame>  K  I  N  E  D  D  D  D  D  A  P  C  V  T  C  N  R  D  K  G  G  I  G  I  R  M  *  R  D  K  Q  Q  H  R  C  L  S  S  G  R  R  *  I  V  D  G  I  R  N  K  *  *  D  S  S  C  C  R  W  *  C  *  I  R  K  I  K  L  Q  G  H  R  E  T  R  D  M  *  *  T  N  S  W  *  L  H  Q  *  *  E  R  *  G  N  T  L  Q  L  W  Y  P  L  Q  T  *  C  N  I  L  L  N  I  L  F  Y  V  Q  L  S  K  G  V  V  R  F  I  Y  L  N  Q  *  H  D  L  L  L  F  K  K  R  T  T  C  F  F  F  T  F  C  M  Y  L  F  I  V  S  L  R  T  K  W  L  D  F  L  S  *  I  L  G  V  F  V  *  T  V  C  F  I  M  S  S  K  Y  Y  Y  D  F  R  *  K  *  Q  N  P   </second_frame>
            <third_frame>   K  S  M  R  M  T  M  M  M  L  L  V  L  L  V  T  V  I  K  V  E  S  V  S  E  C  N  G  T  S  S  S  I  D  A  C  L  R  D  D  D  E  L  L  M  E  S  E  T  S  S  R  I  L  L  A  A  G  G  N  A  R  S  G  R  L  N  Y  K  A  T  G  K  P  E  I  C  N  E  Q  I  V  G  N  C  I  N  N  K  N  V  K  A  T  H  C  N  F  G  T  R  C  K  R  D  V  I  S  S  *  I  F  Y  F  M  Y  N  S  P  R  V  S  F  A  L  F  I  *  T  N  N  M  I  Y  S  C  S  R  N  E  L  L  V  F  F  L  H  F  V  C  I  Y  L  L  S  L  *  E  L  N  G  L  I  F  Y  R  K  F  *  V  F  S  F  E  Q  Y  A  L  L  C  L  Q  S  I  T  M  I  F  V  R  N  N  K  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22516" stop="22187"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSMRMTMMMLLVLLVTVIKVESVSECNGTSSSIDACLRDDDELLMESETSSRILLAAGGNARSGRLNYKATGKPEICNEQIVGNCINNKNVKATHCNFGTRCKRDVISS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="30788" PGL_stop="25160"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30788" e_stop="30604"/>
            <exon e_start="28455" e_stop="28326"/>
            <exon e_start="28102" e_stop="27964"/>
            <exon e_start="27882" e_stop="27670"/>
            <exon e_start="27590" e_stop="27452"/>
            <exon e_start="26902" e_stop="26752"/>
            <exon e_start="26672" e_stop="26563"/>
            <exon e_start="26486" e_stop="26389"/>
            <exon e_start="26273" e_stop="26204"/>
            <exon e_start="25976" e_stop="25520"/>
            <exon e_start="25263" e_stop="25160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="0.994"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.524" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.187" acc_prob="0.729" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.021" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.992" e_score="0.998"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="30788" e_stop="30604" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28455" e_stop="28326" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28102" e_stop="27964" e_length="139"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27882" e_stop="27670" e_length="213"/>
          </exon>
          <intron i_serial="4" don_prob="0.965" acc_prob="0.524">
            <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27590" e_stop="27452" e_length="139"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26902" e_stop="26752" e_length="151"/>
          </exon>
          <intron i_serial="6" don_prob="0.187" acc_prob="0.729">
            <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="26672" e_stop="26563" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26486" e_stop="26389" e_length="98"/>
          </exon>
          <intron i_serial="8" don_prob="0.021" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26273" e_stop="26204" e_length="70"/>
          </exon>
          <intron i_serial="9" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227"/>
          </intron>
          <exon e_serial="10" e_score="0.998">
            <gDNA_exon_boundary e_start="25976" e_stop="25520" e_length="457"/>
          </exon>
          <intron i_serial="10" don_prob="0.979" acc_prob="0.992">
            <gDNA_intron_boundary i_start="25519" i_stop="25264" i_length="256"/>
          </intron>
          <exon e_serial="11" e_score="0.990">
            <gDNA_exon_boundary e_start="25263" e_stop="25160" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30788" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30775" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30772" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30765" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30765" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30758" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30757" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30756" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30754" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30752" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30746" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30742" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30740" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30738" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30735" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30735" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="28028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30734" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581833" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30731" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30725" stop="30604"/>
              <exon start="28455" stop="28336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30716" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30709" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30681" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30677" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30657" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30653" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28433" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28416" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28367" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28350" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28349" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28347" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27693" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27546" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27542" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
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              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27541" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27491" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26828" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26809" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416143" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26809" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689587" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26582" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319499" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26439" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244175" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26419" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25919" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25912" stop="25520"/>
              <exon start="25263" stop="25160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG : ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG : ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT : CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG : CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG : TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG : GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG : ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG : CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG : GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTG : GTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTCAACA</gDNA_template>
            <first_frame> V  F  S  S  L  P  T  K  R  V  L  R  C  A  A  C  C  S  H  S  L  S  L  G  K  F  R  G  R  G  K  *  R  L  W  F  L  L  L  R  K  I  P  S  S  P  S  S  G  L  R  Q  R  C  H  G  R  T  P  A  P  R :   L  Q  S  L  K  L  I  D  C  V  S  R  P  R  N  A  *  L  K  E  G  G  W  I  W  F  R  L  C  S  L  L  Q  I  *  Y  F  L  K  L  L  K  K  :  I  L  S  A  F  S  Q  *  C  A  T  L  S  R  S  L  R  A  W  T  K  Y  M  R  W  Q  S  S  Y  P  L  K  S  F  N  N  P  M  I  N  P  H  C  A  *  K   : S  C  S  I  S  T  I  C  W  R  T  H  T  A  V  S  A  F  T  *  S  P  S  S  W  P  L  P  G  R  L  L  N  T  F  C  R  P  S  K  *  W  I  T  S  *  R  S  G  I  L  E  S  K  I  R  E  S  C  F  L  Q  S  P  T  F  *  R  K  A  K   : A  L  Q  K  I  L  S  C  F  L  Q  S  I  W  K  P  F  R  L  K  M  L  L  I  *  L  R  L  R  K  K  L  P  V  Q  L  S  I  L  S  D  H  L  I  C  L  S :   V  T  C  *  I  C  R  L  *  S  S  W  R  K  M  V  N  M  V  Q  Y  I  N  F  *  R  S  F  S  L  R  G  W  M  L  T  W  N  L  R  Q  Q  I  Q  H  Y  *  K  P  M  :  D  L  S  M  M  T  V  Y  Q  R  *  G  *  C  R  W  *  I  L  A  *  M  N  L  V  K  F  L  I  L  S  S  N  R  H  C  R :   L  M  T  L  R  *  N  R  G  L  L  R  Q  L  Q  L  S  Y  L  I  A  R  L  I  K  *  I  K  *  *  *  *   : A  D  V  R  S  V  C  L  V  C  I  S  G  K  I  S  A  R  N  *  *  L  G  G :   A  T  L  L  V  L  S  A  Q  F  K  P  I  R  L  Q  K  I  A  H  R  Q  C  K  V  *  Q  S  A  E  C  S  L  W  K  S  L  F  N  F  R  D  R  I  *  L  G  Y  T  V  H  I  F  F  S  L  K  F  *  S  S  F  F  F  W  A  K  I  Y  H  L  L  N  Y  S  S  H  F  Y  F  V  R  R  G  F  G  L  Y  F  N  L  T  T  V  F  A  L  Y  F  *  V  D  S  S  I  W  K  *  V  M  L  P  P  K  F  T  C  *  D  I  I  P  E  G  I  P  C  G  L  E  Q  F  T  L  N  E  F  Q  F  R  S  G  V  M  I  R  R  K  C  Q  L  L  :  V  L  F  G  H  A  I  G  I  M  T  R  N  R  N  I  Y  S  K  L  *  N  Y  *  N  N  I  N  F  L  F  F  S  Q   </first_frame>
            <second_frame>  F  F  L  L  S  R  L  R  E  F  S  A  A  L  L  A  V  H  T  L  Y  L  L  G  N  F  A  G  E  E  N  D  D  C  G  S  Y  F  *  G  R  S  R  P  L  R  R  P  V  Y  G  R  D  V  M  G  G  R  R  R  R   : D  C  R  A  *  S  *  *  I  V  C  R  G  P  E  M  H  D  *  R  K  V  V  G  F  G  F  A  Y  A  R  F  C  R  Y  N  I  F  *  S  F  *  K  R :   S  *  V  R  F  H  N  N  V  Q  P  C  Q  E  A  *  E  L  G  P  S  T  *  D  G  R  A  H  I  R  *  N  H  S  T  T  Q  *  *  T  R  I  A  L  E  N  :  L  V  Q  S  L  Q  S  V  G  E  P  I  Q  P  F  L  R  L  L  E  V  P  Q  V  G  H  C  R  E  G  Y  *  T  H  F  V  V  H  Q  N  D  G  *  L  L  E  G  V  E  S  W  S  Q  R  S  E  R  A  V  S  C  N  L  Q  H  F  K  G  K  Q  R  :  L  Y  K  R  F  F  H  V  S  Y  K  V  S  G  N  L  F  V  *  R  C  F  *  Y  D  *  G  *  G  R  S  C  Q  C  N  C  R  F  C  Q  I  T  *  Y  V  *   : V  *  L  A  R  Y  A  G  Y  S  P  V  G  E  R  W  S  I  W  S  S  I  S  T  S  E  D  L  S  H  S  E  A  G  C  L  L  G  I  *  G  S  K  F  S  I  I  K  N  L  W :   T  C  P  *  *  L  Y  I  K  D  E  V  D  V  V  G  R  S  W  L  E  *  I  *  S  N  S  L  F  C  H  Q  T  G  I  A   : D  *  *  H  *  G  R  I  V  G  C  *  G  N  Y  S  *  V  T  *  L  Q  D  *  S  N  E  S  S  S  N  S  E  :  P  M  Y  G  A  C  V  W  C  A  S  V  A  R  S  P  H  E  T  S  D  L  E   : G  Q  H  C  W  C  Y  Q  H  S  S  S  Q  *  D  Y  R  R  *  H  T  G  S  A  R  F  S  N  P  L  S  V  L  C  G  N  L  F  L  I  L  E  I  G  F  N  W  D  I  L  F  T  S  F  S  A  *  N  F  D  H  L  F  F  F  G  Q  K  Y  T  I  C  *  I  T  V  A  I  F  I  L  S  V  E  V  S  G  C  I  S  I  *  R  L  S  L  L  C  T  F  K  L  T  P  V  F  G  N  R  L  C  C  P  P  N  S  L  V  R  I  S  Y  Q  K  E  F  L  A  G  W  N  N  S  L  L  M  N  S  S  S  D  Q  V  L  *  F  D  A  N  V  N  F  W :   S  C  L  A  M  R  L  V  S  *  R  E  I  V  I  S  T  V  S  C  K  I  I  R  I  I  S  I  F  Y  F  L  V  N  </second_frame>
            <third_frame>   F  F  F  S  P  D  *  E  S  S  P  L  R  C  L  L  F  T  L  S  I  S  W  E  I  S  R  A  R  K  M  T  T  V  V  P  T  S  E  E  D  P  V  L  S  V  V  R  F  T  A  E  M  S  W  A  D  A  G  A  E  :  T  A  E  P  E  V  N  R  L  C  V  E  A  Q  K  C  M  I  E  G  R  W  L  D  L  V  S  L  M  L  A  S  A  D  I  I  F  S  K  A  S  E  K   : D  L  E  C  V  F  T  I  M  C  N  L  V  K  K  P  E  S  L  D  Q  V  H  E  M  A  E  L  I  S  A  K  I  I  Q  Q  P  N  D  K  P  A  L  R  L  K  I :   L  F  N  L  Y  N  L  L  E  N  P  Y  S  R  F  C  V  Y  L  K  S  L  K  L  A  T  A  G  K  V  T  E  H  I  L  S  S  I  K  M  M  D  N  F  L  K  E  W  N  L  G  V  K  D  Q  R  E  L  F  L  A  I  S  N  I  L  K  E  S  K  G :   S  T  K  D  S  F  M  F  L  T  K  Y  L  E  T  F  S  S  E  D  A  S  N  M  T  E  A  K  E  E  A  A  S  A  I  V  D  F  V  R  S  P  D  M  F  K  :  C  D  L  L  D  M  P  A  I  V  Q  L  E  K  D  G  Q  Y  G  P  V  Y  Q  L  L  K  I  F  L  T  Q  R  L  D  A  Y  L  E  F  E  A  A  N  S  A  L  L  K  T  Y   : G  L  V  H  D  D  C  I  S  K  M  R  L  M  S  L  V  D  L  G  L  N  E  S  S  Q  I  P  Y  S  V  I  K  Q  A  L  Q  :  I  D  D  I  E  V  E  S  W  V  V  K  A  I  T  A  K  L  L  D  C  K  I  D  Q  M  N  Q  V  V  I  V  S :   R  C  T  E  R  V  F  G  V  H  Q  W  Q  D  L  R  T  K  L  V  T  W  R  :  G  N  I  A  G  V  I  S  T  V  Q  A  N  K  I  T  E  D  S  T  Q  A  V  Q  G  L  A  I  R  *  V  F  F  V  E  I  S  F  *  F  *  R  S  D  L  I  G  I  Y  C  S  H  L  F  Q  L  E  I  L  I  I  F  F  F  L  G  K  N  I  P  F  V  K  L  Q  *  P  F  L  F  C  P  S  R  F  R  A  V  F  Q  F  D  D  C  L  C  F  V  L  L  S  *  L  Q  Y  L  E  I  G  Y  V  A  P  Q  I  H  L  L  G  Y  H  T  R  R  N  S  L  R  A  G  T  I  H  S  *  *  I  P  V  Q  I  R  C  Y  D  S  T  Q  M  S  T  F   : G  P  V  W  P  C  D  W  Y  H  D  E  K  S  *  Y  L  Q  *  V  V  K  L  L  E  *  Y  Q  F  F  I  F  *  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30765" stop="30604"/>
                    <exon start="28455" stop="28326"/>
                    <exon start="28102" stop="27964"/>
                    <exon start="27882" stop="27670"/>
                    <exon start="27590" stop="27452"/>
                    <exon start="26902" stop="26752"/>
                    <exon start="26672" stop="26563"/>
                    <exon start="26486" stop="26389"/>
                    <exon start="26273" stop="26204"/>
                    <exon start="25976" stop="25887"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1299</number_coding_nucleotides>
                  <number_encoded_amino_acids>433</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESSPLRCLLFTLSISWEISRARKMTTVVPTSEEDPVLSVVRFTAEMSWADAGAETAEPEVNRLCVEAQKCMIEGRWLDLVSLMLASADIIFSKASEKDLECVFTIMCNLVKKPESLDQVHEMAELISAKIIQQPNDKPALRLKILFNLYNLLENPYSRFCVYLKSLKLATAGKVTEHILSSIKMMDNFLKEWNLGVKDQRELFLAISNILKESKGSTKDSFMFLTKYLETFSSEDASNMTEAKEEAASAIVDFVRSPDMFKCDLLDMPAIVQLEKDGQYGPVYQLLKIFLTQRLDAYLEFEAANSALLKTYGLVHDDCISKMRLMSLVDLGLNESSQIPYSVIKQALQIDDIEVESWVVKAITAKLLDCKIDQMNQVVIVSRCTERVFGVHQWQDLRTKLVTWRGNIAGVISTVQANKITEDSTQAVQGLAIR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30788" e_stop="30604"/>
            <exon e_start="28455" e_stop="28326"/>
            <exon e_start="28102" e_stop="27964"/>
            <exon e_start="27882" e_stop="27670"/>
            <exon e_start="27590" e_stop="27452"/>
            <exon e_start="26902" e_stop="26752"/>
            <exon e_start="26672" e_stop="26563"/>
            <exon e_start="26486" e_stop="26389"/>
            <exon e_start="26273" e_stop="26204"/>
            <exon e_start="25976" e_stop="25878"/>
            <exon e_start="25827" e_stop="25660"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="0.973"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.524" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.187" acc_prob="0.729" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.021" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="0.986"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.960"/>
          <exon-only e_score="0.798"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="30788" e_stop="30604" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28455" e_stop="28326" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28102" e_stop="27964" e_length="139"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27882" e_stop="27670" e_length="213"/>
          </exon>
          <intron i_serial="4" don_prob="0.965" acc_prob="0.524">
            <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27590" e_stop="27452" e_length="139"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26902" e_stop="26752" e_length="151"/>
          </exon>
          <intron i_serial="6" don_prob="0.187" acc_prob="0.729">
            <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="26672" e_stop="26563" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26486" e_stop="26389" e_length="98"/>
          </exon>
          <intron i_serial="8" don_prob="0.021" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115"/>
          </intron>
          <exon e_serial="9" e_score="0.986">
            <gDNA_exon_boundary e_start="26273" e_stop="26204" e_length="70"/>
          </exon>
          <intron i_serial="9" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227"/>
          </intron>
          <exon e_serial="10" e_score="0.960">
            <gDNA_exon_boundary e_start="25976" e_stop="25878" e_length="99"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="25877" i_stop="25828" i_length="50"/>
          </intron>
          <exon e_serial="11" e_score="0.798">
            <gDNA_exon_boundary e_start="25827" e_stop="25660" e_length="168"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30788" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30772" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444541" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30765" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30765" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30758" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30757" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30756" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30755" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30754" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30752" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30746" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30742" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30740" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30738" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30735" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318121" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30735" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="28028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30734" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581833" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30731" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30725" stop="30604"/>
              <exon start="28455" stop="28336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30716" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30709" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30681" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30677" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30657" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30653" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28433" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28416" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28367" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28350" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28349" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28347" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27693" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27578" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25878"/>
              <exon start="25827" stop="25660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27541" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295580" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG : ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG : ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT : CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG : CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG : TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG : GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG : ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG : CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG : GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTT : TTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTT</gDNA_template>
            <first_frame> V  F  S  S  L  P  T  K  R  V  L  R  C  A  A  C  C  S  H  S  L  S  L  G  K  F  R  G  R  G  K  *  R  L  W  F  L  L  L  R  K  I  P  S  S  P  S  S  G  L  R  Q  R  C  H  G  R  T  P  A  P  R :   L  Q  S  L  K  L  I  D  C  V  S  R  P  R  N  A  *  L  K  E  G  G  W  I  W  F  R  L  C  S  L  L  Q  I  *  Y  F  L  K  L  L  K  K  :  I  L  S  A  F  S  Q  *  C  A  T  L  S  R  S  L  R  A  W  T  K  Y  M  R  W  Q  S  S  Y  P  L  K  S  F  N  N  P  M  I  N  P  H  C  A  *  K   : S  C  S  I  S  T  I  C  W  R  T  H  T  A  V  S  A  F  T  *  S  P  S  S  W  P  L  P  G  R  L  L  N  T  F  C  R  P  S  K  *  W  I  T  S  *  R  S  G  I  L  E  S  K  I  R  E  S  C  F  L  Q  S  P  T  F  *  R  K  A  K   : A  L  Q  K  I  L  S  C  F  L  Q  S  I  W  K  P  F  R  L  K  M  L  L  I  *  L  R  L  R  K  K  L  P  V  Q  L  S  I  L  S  D  H  L  I  C  L  S :   V  T  C  *  I  C  R  L  *  S  S  W  R  K  M  V  N  M  V  Q  Y  I  N  F  *  R  S  F  S  L  R  G  W  M  L  T  W  N  L  R  Q  Q  I  Q  H  Y  *  K  P  M  :  D  L  S  M  M  T  V  Y  Q  R  *  G  *  C  R  W  *  I  L  A  *  M  N  L  V  K  F  L  I  L  S  S  N  R  H  C  R :   L  M  T  L  R  *  N  R  G  L  L  R  Q  L  Q  L  S  Y  L  I  A  R  L  I  K  *  I  K  *  *  *  *   : A  D  V  R  S  V  C  L  V  C  I  S  G  K  I  S  A  R  N  *  *  L  G  G :   A  T  L  L  V  L  S  A  Q  F  K  P  I  R  L  Q  K  I  A  H  R  Q  C  K  V  *  Q  S  A  E  C  S  F :   S  H  L  F  Q  L  E  I  L  I  I  F  F  F  L  G  K  N  I  P  F  V  K  L  Q  *  P  F  L  F  C  P  S  R  F  R  A  V  F  Q  F  D  D  C  L  C  F  V  L  L  S  *  L  Q  Y   </first_frame>
            <second_frame>  F  F  L  L  S  R  L  R  E  F  S  A  A  L  L  A  V  H  T  L  Y  L  L  G  N  F  A  G  E  E  N  D  D  C  G  S  Y  F  *  G  R  S  R  P  L  R  R  P  V  Y  G  R  D  V  M  G  G  R  R  R  R   : D  C  R  A  *  S  *  *  I  V  C  R  G  P  E  M  H  D  *  R  K  V  V  G  F  G  F  A  Y  A  R  F  C  R  Y  N  I  F  *  S  F  *  K  R :   S  *  V  R  F  H  N  N  V  Q  P  C  Q  E  A  *  E  L  G  P  S  T  *  D  G  R  A  H  I  R  *  N  H  S  T  T  Q  *  *  T  R  I  A  L  E  N  :  L  V  Q  S  L  Q  S  V  G  E  P  I  Q  P  F  L  R  L  L  E  V  P  Q  V  G  H  C  R  E  G  Y  *  T  H  F  V  V  H  Q  N  D  G  *  L  L  E  G  V  E  S  W  S  Q  R  S  E  R  A  V  S  C  N  L  Q  H  F  K  G  K  Q  R  :  L  Y  K  R  F  F  H  V  S  Y  K  V  S  G  N  L  F  V  *  R  C  F  *  Y  D  *  G  *  G  R  S  C  Q  C  N  C  R  F  C  Q  I  T  *  Y  V  *   : V  *  L  A  R  Y  A  G  Y  S  P  V  G  E  R  W  S  I  W  S  S  I  S  T  S  E  D  L  S  H  S  E  A  G  C  L  L  G  I  *  G  S  K  F  S  I  I  K  N  L  W :   T  C  P  *  *  L  Y  I  K  D  E  V  D  V  V  G  R  S  W  L  E  *  I  *  S  N  S  L  F  C  H  Q  T  G  I  A   : D  *  *  H  *  G  R  I  V  G  C  *  G  N  Y  S  *  V  T  *  L  Q  D  *  S  N  E  S  S  S  N  S  E  :  P  M  Y  G  A  C  V  W  C  A  S  V  A  R  S  P  H  E  T  S  D  L  E   : G  Q  H  C  W  C  Y  Q  H  S  S  S  Q  *  D  Y  R  R  *  H  T  G  S  A  R  F  S  N  P  L  S  V  L   : F  H  I  F  F  S  L  K  F  *  S  S  F  F  F  W  A  K  I  Y  H  L  L  N  Y  S  S  H  F  Y  F  V  R  R  G  F  G  L  Y  F  N  L  T  T  V  F  A  L  Y  F  *  V  D  S  S  I  </second_frame>
            <third_frame>   F  F  F  S  P  D  *  E  S  S  P  L  R  C  L  L  F  T  L  S  I  S  W  E  I  S  R  A  R  K  M  T  T  V  V  P  T  S  E  E  D  P  V  L  S  V  V  R  F  T  A  E  M  S  W  A  D  A  G  A  E  :  T  A  E  P  E  V  N  R  L  C  V  E  A  Q  K  C  M  I  E  G  R  W  L  D  L  V  S  L  M  L  A  S  A  D  I  I  F  S  K  A  S  E  K   : D  L  E  C  V  F  T  I  M  C  N  L  V  K  K  P  E  S  L  D  Q  V  H  E  M  A  E  L  I  S  A  K  I  I  Q  Q  P  N  D  K  P  A  L  R  L  K  I :   L  F  N  L  Y  N  L  L  E  N  P  Y  S  R  F  C  V  Y  L  K  S  L  K  L  A  T  A  G  K  V  T  E  H  I  L  S  S  I  K  M  M  D  N  F  L  K  E  W  N  L  G  V  K  D  Q  R  E  L  F  L  A  I  S  N  I  L  K  E  S  K  G :   S  T  K  D  S  F  M  F  L  T  K  Y  L  E  T  F  S  S  E  D  A  S  N  M  T  E  A  K  E  E  A  A  S  A  I  V  D  F  V  R  S  P  D  M  F  K  :  C  D  L  L  D  M  P  A  I  V  Q  L  E  K  D  G  Q  Y  G  P  V  Y  Q  L  L  K  I  F  L  T  Q  R  L  D  A  Y  L  E  F  E  A  A  N  S  A  L  L  K  T  Y   : G  L  V  H  D  D  C  I  S  K  M  R  L  M  S  L  V  D  L  G  L  N  E  S  S  Q  I  P  Y  S  V  I  K  Q  A  L  Q  :  I  D  D  I  E  V  E  S  W  V  V  K  A  I  T  A  K  L  L  D  C  K  I  D  Q  M  N  Q  V  V  I  V  S :   R  C  T  E  R  V  F  G  V  H  Q  W  Q  D  L  R  T  K  L  V  T  W  R  :  G  N  I  A  G  V  I  S  T  V  Q  A  N  K  I  T  E  D  S  T  Q  A  V  Q  G  L  A  I  R  *  V  F  F  :  F  T  S  F  S  A  *  N  F  D  H  L  F  F  F  G  Q  K  Y  T  I  C  *  I  T  V  A  I  F  I  L  S  V  E  V  S  G  C  I  S  I  *  R  L  S  L  L  C  T  F  K  L  T  P  V  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30765" stop="30604"/>
                    <exon start="28455" stop="28326"/>
                    <exon start="28102" stop="27964"/>
                    <exon start="27882" stop="27670"/>
                    <exon start="27590" stop="27452"/>
                    <exon start="26902" stop="26752"/>
                    <exon start="26672" stop="26563"/>
                    <exon start="26486" stop="26389"/>
                    <exon start="26273" stop="26204"/>
                    <exon start="25976" stop="25887"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1299</number_coding_nucleotides>
                  <number_encoded_amino_acids>433</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESSPLRCLLFTLSISWEISRARKMTTVVPTSEEDPVLSVVRFTAEMSWADAGAETAEPEVNRLCVEAQKCMIEGRWLDLVSLMLASADIIFSKASEKDLECVFTIMCNLVKKPESLDQVHEMAELISAKIIQQPNDKPALRLKILFNLYNLLENPYSRFCVYLKSLKLATAGKVTEHILSSIKMMDNFLKEWNLGVKDQRELFLAISNILKESKGSTKDSFMFLTKYLETFSSEDASNMTEAKEEAASAIVDFVRSPDMFKCDLLDMPAIVQLEKDGQYGPVYQLLKIFLTQRLDAYLEFEAANSALLKTYGLVHDDCISKMRLMSLVDLGLNESSQIPYSVIKQALQIDDIEVESWVVKAITAKLLDCKIDQMNQVVIVSRCTERVFGVHQWQDLRTKLVTWRGNIAGVISTVQANKITEDSTQAVQGLAIR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="26908" e_stop="26752"/>
            <exon e_start="26672" e_stop="26563"/>
            <exon e_start="26486" e_stop="26389"/>
            <exon e_start="26273" e_stop="26204"/>
            <exon e_start="25976" e_stop="25520"/>
            <exon e_start="25263" e_stop="25160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.187" acc_prob="0.729" e_score="0.975"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.021" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.992" e_score="0.998"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="26908" e_stop="26752" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.187" acc_prob="0.729">
            <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26672" e_stop="26563" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26486" e_stop="26389" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.021" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26273" e_stop="26204" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="25976" e_stop="25520" e_length="457"/>
          </exon>
          <intron i_serial="5" don_prob="0.979" acc_prob="0.992">
            <gDNA_intron_boundary i_start="25519" i_stop="25264" i_length="256"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="25263" e_stop="25160" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26908" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26907" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26828" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26809" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416143" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26809" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26793" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689587" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26582" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319499" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26439" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244175" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26419" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25919" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25912" stop="25520"/>
              <exon start="25263" stop="25160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG : GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG : ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG : CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG : GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTG : GTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTCAACA</gDNA_template>
            <first_frame> W  Q  C  D  L  L  D  M  P  A  I  V  Q  L  E  K  D  G  Q  Y  G  P  V  Y  Q  L  L  K  I  F  L  T  Q  R  L  D  A  Y  L  E  F  E  A  A  N  S  A  L  L  K  T  Y   : G  L  V  H  D  D  C  I  S  K  M  R  L  M  S  L  V  D  L  G  L  N  E  S  S  Q  I  P  Y  S  V  I  K  Q  A  L  Q  :  I  D  D  I  E  V  E  S  W  V  V  K  A  I  T  A  K  L  L  D  C  K  I  D  Q  M  N  Q  V  V  I  V  S :   R  C  T  E  R  V  F  G  V  H  Q  W  Q  D  L  R  T  K  L  V  T  W  R  :  G  N  I  A  G  V  I  S  T  V  Q  A  N  K  I  T  E  D  S  T  Q  A  V  Q  G  L  A  I  R  *  V  F  F  V  E  I  S  F  *  F  *  R  S  D  L  I  G  I  Y  C  S  H  L  F  Q  L  E  I  L  I  I  F  F  F  L  G  K  N  I  P  F  V  K  L  Q  *  P  F  L  F  C  P  S  R  F  R  A  V  F  Q  F  D  D  C  L  C  F  V  L  L  S  *  L  Q  Y  L  E  I  G  Y  V  A  P  Q  I  H  L  L  G  Y  H  T  R  R  N  S  L  R  A  G  T  I  H  S  *  *  I  P  V  Q  I  R  C  Y  D  S  T  Q  M  S  T  F   : G  P  V  W  P  C  D  W  Y  H  D  E  K  S  *  Y  L  Q  *  V  V  K  L  L  E  *  Y  Q  F  F  I  F  *  S  T </first_frame>
            <second_frame>  G  S  V  T  C  *  I  C  R  L  *  S  S  W  R  K  M  V  N  M  V  Q  Y  I  N  F  *  R  S  F  S  L  R  G  W  M  L  T  W  N  L  R  Q  Q  I  Q  H  Y  *  K  P  M  :  D  L  S  M  M  T  V  Y  Q  R  *  G  *  C  R  W  *  I  L  A  *  M  N  L  V  K  F  L  I  L  S  S  N  R  H  C  R :   L  M  T  L  R  *  N  R  G  L  L  R  Q  L  Q  L  S  Y  L  I  A  R  L  I  K  *  I  K  *  *  *  *   : A  D  V  R  S  V  C  L  V  C  I  S  G  K  I  S  A  R  N  *  *  L  G  G :   A  T  L  L  V  L  S  A  Q  F  K  P  I  R  L  Q  K  I  A  H  R  Q  C  K  V  *  Q  S  A  E  C  S  L  W  K  S  L  F  N  F  R  D  R  I  *  L  G  Y  T  V  H  I  F  F  S  L  K  F  *  S  S  F  F  F  W  A  K  I  Y  H  L  L  N  Y  S  S  H  F  Y  F  V  R  R  G  F  G  L  Y  F  N  L  T  T  V  F  A  L  Y  F  *  V  D  S  S  I  W  K  *  V  M  L  P  P  K  F  T  C  *  D  I  I  P  E  G  I  P  C  G  L  E  Q  F  T  L  N  E  F  Q  F  R  S  G  V  M  I  R  R  K  C  Q  L  L  :  V  L  F  G  H  A  I  G  I  M  T  R  N  R  N  I  Y  S  K  L  *  N  Y  *  N  N  I  N  F  L  F  F  S  Q   </second_frame>
            <third_frame>   A  V  *  L  A  R  Y  A  G  Y  S  P  V  G  E  R  W  S  I  W  S  S  I  S  T  S  E  D  L  S  H  S  E  A  G  C  L  L  G  I  *  G  S  K  F  S  I  I  K  N  L  W :   T  C  P  *  *  L  Y  I  K  D  E  V  D  V  V  G  R  S  W  L  E  *  I  *  S  N  S  L  F  C  H  Q  T  G  I  A   : D  *  *  H  *  G  R  I  V  G  C  *  G  N  Y  S  *  V  T  *  L  Q  D  *  S  N  E  S  S  S  N  S  E  :  P  M  Y  G  A  C  V  W  C  A  S  V  A  R  S  P  H  E  T  S  D  L  E   : G  Q  H  C  W  C  Y  Q  H  S  S  S  Q  *  D  Y  R  R  *  H  T  G  S  A  R  F  S  N  P  L  S  V  L  C  G  N  L  F  L  I  L  E  I  G  F  N  W  D  I  L  F  T  S  F  S  A  *  N  F  D  H  L  F  F  F  G  Q  K  Y  T  I  C  *  I  T  V  A  I  F  I  L  S  V  E  V  S  G  C  I  S  I  *  R  L  S  L  L  C  T  F  K  L  T  P  V  F  G  N  R  L  C  C  P  P  N  S  L  V  R  I  S  Y  Q  K  E  F  L  A  G  W  N  N  S  L  L  M  N  S  S  S  D  Q  V  L  *  F  D  A  N  V  N  F  W :   S  C  L  A  M  R  L  V  S  *  R  E  I  V  I  S  T  V  S  C  K  I  I  R  I  I  S  I  F  Y  F  L  V  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26908" stop="26752"/>
                    <exon start="26672" stop="26563"/>
                    <exon start="26486" stop="26389"/>
                    <exon start="26273" stop="26204"/>
                    <exon start="25976" stop="25887"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WQCDLLDMPAIVQLEKDGQYGPVYQLLKIFLTQRLDAYLEFEAANSALLKTYGLVHDDCISKMRLMSLVDLGLNESSQIPYSVIKQALQIDDIEVESWVVKAITAKLLDCKIDQMNQVVIVSRCTERVFGVHQWQDLRTKLVTWRGNIAGVISTVQANKITEDSTQAVQGLAIR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="30761" e_stop="30604"/>
            <exon e_start="28455" e_stop="28338"/>
            <exon e_start="25811" e_stop="25548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="0.968"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.992"/>
          <exon-only e_score="0.881"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="30761" e_stop="30604" e_length="158"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="28455" e_stop="28338" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28337" i_stop="25812" i_length="2526"/>
          </intron>
          <exon e_serial="3" e_score="0.881">
            <gDNA_exon_boundary e_start="25811" e_stop="25548" e_length="264"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30761" stop="30604"/>
              <exon start="28455" stop="28338"/>
              <exon start="25811" stop="25548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431705" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30761" stop="30604"/>
              <exon start="28455" stop="28338"/>
              <exon start="25811" stop="25552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431704" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30761" stop="30604"/>
              <exon start="28455" stop="28338"/>
              <exon start="25811" stop="25552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464862" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG : ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAG : CTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGT</gDNA_template>
            <first_frame> V  L  R  C  A  A  C  C  S  H  S  L  S  L  G  K  F  R  G  R  G  K  *  R  L  W  F  L  L  L  R  K  I  P  S  S  P  S  S  G  L  R  Q  R  C  H  G  R  T  P  A  P  R :   L  Q  S  L  K  L  I  D  C  V  S  R  P  R  N  A  *  L  K  E  G  G  W  I  W  F  R  L  C  S  L  L  Q  I  *  Y  F  L  K  :  L  E  I  L  I  I  F  F  F  L  G  K  N  I  P  F  V  K  L  Q  *  P  F  L  F  C  P  S  R  F  R  A  V  F  Q  F  D  D  C  L  C  F  V  L  L  S  *  L  Q  Y  L  E  I  G  Y  V  A  P  Q  I  H  L  L  G  Y  H  T  R  R  N  S  L  R  A  G  T  I  H  S  *  *  I  P  V  Q  I  R  C </first_frame>
            <second_frame>  F  S  A  A  L  L  A  V  H  T  L  Y  L  L  G  N  F  A  G  E  E  N  D  D  C  G  S  Y  F  *  G  R  S  R  P  L  R  R  P  V  Y  G  R  D  V  M  G  G  R  R  R  R   : D  C  R  A  *  S  *  *  I  V  C  R  G  P  E  M  H  D  *  R  K  V  V  G  F  G  F  A  Y  A  R  F  C  R  Y  N  I  F  *  S :   L  K  F  *  S  S  F  F  F  W  A  K  I  Y  H  L  L  N  Y  S  S  H  F  Y  F  V  R  R  G  F  G  L  Y  F  N  L  T  T  V  F  A  L  Y  F  *  V  D  S  S  I  W  K  *  V  M  L  P  P  K  F  T  C  *  D  I  I  P  E  G  I  P  C  G  L  E  Q  F  T  L  N  E  F  Q  F  R  S  G   </second_frame>
            <third_frame>   S  P  L  R  C  L  L  F  T  L  S  I  S  W  E  I  S  R  A  R  K  M  T  T  V  V  P  T  S  E  E  D  P  V  L  S  V  V  R  F  T  A  E  M  S  W  A  D  A  G  A  E  :  T  A  E  P  E  V  N  R  L  C  V  E  A  Q  K  C  M  I  E  G  R  W  L  D  L  V  S  L  M  L  A  S  A  D  I  I  F  S  K   : A  *  N  F  D  H  L  F  F  F  G  Q  K  Y  T  I  C  *  I  T  V  A  I  F  I  L  S  V  E  V  S  G  C  I  S  I  *  R  L  S  L  L  C  T  F  K  L  T  P  V  F  G  N  R  L  C  C  P  P  N  S  L  V  R  I  S  Y  Q  K  E  F  L  A  G  W  N  N  S  L  L  M  N  S  S  S  D  Q  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30759" stop="30604"/>
                    <exon start="28455" stop="28338"/>
                    <exon start="25811" stop="25807"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPLRCLLFTLSISWEISRARKMTTVVPTSEEDPVLSVVRFTAEMSWADAGAETAEPEVNRLCVEAQKCMIEGRWLDLVSLMLASADIIFSKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="37140" PGL_stop="30875"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35125"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="35476" e_stop="35125" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35143"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E294550" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36277" stop="36013"/>
              <exon start="35476" stop="35130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36259" stop="36013"/>
              <exon start="35476" stop="35127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36254" stop="36013"/>
              <exon start="35476" stop="35129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36154" stop="36013"/>
              <exon start="35476" stop="35130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36081" stop="36013"/>
              <exon start="35476" stop="35164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35441" stop="35126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35368" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292959" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  M  S  S  F  Y  I  C  F  I  L  S  S  * </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *  C  H  P  F  I  F  V  S  Y  *  V  V   </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  V  I  L  L  Y  L  F  H  I  K  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35149"/>
            <exon e_start="30920" e_stop="30881"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.691" e_score="1.000"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35149" e_length="328"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.691">
            <gDNA_intron_boundary i_start="35148" i_stop="30921" i_length="4228"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="30920" e_stop="30881" e_length="40"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
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        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTAT : AATTGTTTTACCAAAAAAAAAAAAAAAAAAAAAGGAGGAG</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  M  S  S  F  Y  :  N  C  F  T  K  K  K  K  K  K  K  G  G  </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *  C  H  P  F  I :   I  V  L  P  K  K  K  K  K  K  K  E  E </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  V  I  L  L   : *  L  F  Y  Q  K  K  K  K  K  K  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35151"/>
            <exon e_start="30920" e_stop="30889"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.691" e_score="1.000"/>
          <exon-only e_score="0.719"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35151" e_length="326"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.691">
            <gDNA_intron_boundary i_start="35150" i_stop="30921" i_length="4230"/>
          </intron>
          <exon e_serial="4" e_score="0.719">
            <gDNA_exon_boundary e_start="30920" e_stop="30889" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35151"/>
              <exon start="30920" stop="30889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36081" stop="36013"/>
              <exon start="35476" stop="35164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35368" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292959" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT : AATTGTTTTACCAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  M  S  S  F   : *  L  F  Y  Q  K  K  K  K  K  K </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *  C  H  P  F  :  N  C  F  T  K  K  K  K  K  K   </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  V  I  L  L :   I  V  L  P  K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35162"/>
            <exon e_start="30909" e_stop="30888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35162" e_length="315"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35161" i_stop="30910" i_length="4252"/>
          </intron>
          <exon e_serial="4" e_score="0.955">
            <gDNA_exon_boundary e_start="30909" e_stop="30888" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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          <PGS_line>
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          <PGS_line>
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        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGAT : CAAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  I :   K  K  K  K  K  K  K </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *   : S  K  K  K  K  K  K   </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  :  Q  K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35167"/>
            <exon e_start="34909" e_stop="34902"/>
            <exon e_start="33599" e_stop="33590"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.313" e_score="1.000"/>
          <exon-intron don_prob="0.083" acc_prob="0.854" e_score="0.625"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35167" e_length="310"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.313">
            <gDNA_intron_boundary i_start="35166" i_stop="34910" i_length="257"/>
          </intron>
          <exon e_serial="4" e_score="0.625">
            <gDNA_exon_boundary e_start="34909" e_stop="34902" e_length="8"/>
          </exon>
          <intron i_serial="4" don_prob="0.083" acc_prob="0.854">
            <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302"/>
          </intron>
          <exon e_serial="5" e_score="0.800">
            <gDNA_exon_boundary e_start="33599" e_stop="33590" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36113" stop="36013"/>
              <exon start="35476" stop="35167"/>
              <exon start="34909" stop="34902"/>
              <exon start="33599" stop="33590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAA : TATAACAA : AAAAAAATGA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  :  Y  N  K :   K  K  * </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  N :   I  T   : K  K  N   </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G   : I  *  Q  :  K  K  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35166"/>
            <exon e_start="30920" e_stop="30888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.691" e_score="1.000"/>
          <exon-only e_score="0.727"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35166" e_length="311"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.691">
            <gDNA_intron_boundary i_start="35165" i_stop="30921" i_length="4245"/>
          </intron>
          <exon e_serial="4" e_score="0.727">
            <gDNA_exon_boundary e_start="30920" e_stop="30888" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35166"/>
              <exon start="30920" stop="30888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAA : AATTGTTTTACCAAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E   : K  L  F  Y  Q  K  K  K  K  K  K  </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  :  N  C  F  T  K  K  K  K  K  K  K </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  K :   I  V  L  P  K  K  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35167"/>
            <exon e_start="30920" e_stop="30875"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.691" e_score="1.000"/>
          <exon-only e_score="0.674"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35167" e_length="310"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.691">
            <gDNA_intron_boundary i_start="35166" i_stop="30921" i_length="4246"/>
          </intron>
          <exon e_serial="4" e_score="0.674">
            <gDNA_exon_boundary e_start="30920" e_stop="30875" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
              <exon start="30920" stop="30875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAA : AATTGTTTTACCAAAAAAAAAAAAAAAAAAAAAGGAGGAGAAAGAA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  :  N  C  F  T  K  K  K  K  K  K  K  G  G  E  R  </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K :   I  V  L  P  K  K  K  K  K  K  K  E  E  K  E </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G   : K  L  F  Y  Q  K  K  K  K  K  K  R  R  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35173"/>
            <exon e_start="34350" e_stop="34322"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.838" e_score="1.000"/>
          <exon-only e_score="0.621"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35173" e_length="304"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.838">
            <gDNA_intron_boundary i_start="35172" i_stop="34351" i_length="822"/>
          </intron>
          <exon e_serial="4" e_score="0.621">
            <gDNA_exon_boundary e_start="34350" e_stop="34322" e_length="29"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37121" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37110" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37102" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433796" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35444" stop="35173"/>
              <exon start="34350" stop="34322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224479" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="8" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGAT : GCTGAAATTGAAATAAACACAGAAAATTT</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  :  A  E  I  E  I  N  T  E  N   </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M :   L  K  L  K  *  T  Q  K  I  </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *   : C  *  N  *  N  K  H  R  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
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            <referenceDNA id="SGN-E579217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35402" stop="35168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35368" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292959" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="9" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTTATATTTGTTTCATATTAAGTAGTTGA</gDNA_template>
            <first_frame> A  E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *  C  H  P  F  I  F  V  S  Y  *  V  V   </first_frame>
            <second_frame>  Q  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  V  I  L  L  Y  L  F  H  I  K  *  L  </second_frame>
            <third_frame>   R  E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  M  S  S  F  Y  I  C  F  I  L  S  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="10">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35188"/>
            <exon e_start="30909" e_stop="30885"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.880"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35188" e_length="289"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35187" i_stop="30910" i_length="4278"/>
          </intron>
          <exon e_serial="4" e_score="0.880">
            <gDNA_exon_boundary e_start="30909" e_stop="30885" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36229" stop="36013"/>
              <exon start="35476" stop="35188"/>
              <exon start="30909" stop="30885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="10" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA : CAAAAAAAAAAAAAAAAAAAAAGGA</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  :  Q  K  K  K  K  K  K  R  </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  Y :   K  K  K  K  K  K  K  G </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F   : T  K  K  K  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="10" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="11">
          <exon_coordinates>
            <exon e_start="37140" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35188"/>
            <exon e_start="34909" e_stop="34902"/>
            <exon e_start="33599" e_stop="33589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.313" e_score="1.000"/>
          <exon-intron don_prob="0.083" acc_prob="0.854" e_score="0.625"/>
          <exon-only e_score="0.727"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37140" e_stop="37085" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35188" e_length="289"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.313">
            <gDNA_intron_boundary i_start="35187" i_stop="34910" i_length="278"/>
          </intron>
          <exon e_serial="4" e_score="0.625">
            <gDNA_exon_boundary e_start="34909" e_stop="34902" e_length="8"/>
          </exon>
          <intron i_serial="4" don_prob="0.083" acc_prob="0.854">
            <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302"/>
          </intron>
          <exon e_serial="5" e_score="0.727">
            <gDNA_exon_boundary e_start="33599" e_stop="33589" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37140" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37123" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37114" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37106" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
              <exon start="34909" stop="34902"/>
              <exon start="33599" stop="33589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="11" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTA : TATAACAA : AAAAAAATGAT</gDNA_template>
            <first_frame> A  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  :  Y  N  K :   K  K  *  </first_frame>
            <second_frame>  L  F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  Y :   I  T   : K  K  N  D </second_frame>
            <third_frame>   Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F   : I  *  Q  :  K  K  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="11" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="12">
          <exon_coordinates>
            <exon e_start="36283" e_stop="36013"/>
            <exon e_start="35476" e_stop="35179"/>
            <exon e_start="33599" e_stop="33593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.854" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36283" e_stop="36013" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35179" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.854">
            <gDNA_intron_boundary i_start="35178" i_stop="33600" i_length="1579"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33599" e_stop="33593" e_length="7"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36283" stop="36013"/>
              <exon start="35476" stop="35182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36282" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36282" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35179"/>
              <exon start="33599" stop="33593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="12" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCT : AAAAAAA</gDNA_template>
            <first_frame> A  E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L :   K  K </first_frame>
            <second_frame>  Q  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I   : *  K   </second_frame>
            <third_frame>   R  E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  :  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="12" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="13">
          <exon_coordinates>
            <exon e_start="36283" e_stop="36013"/>
            <exon e_start="35476" e_stop="35179"/>
            <exon e_start="30920" e_stop="30890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.691" e_score="1.000"/>
          <exon-only e_score="0.774"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36283" e_stop="36013" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35179" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.691">
            <gDNA_intron_boundary i_start="35178" i_stop="30921" i_length="4258"/>
          </intron>
          <exon e_serial="3" e_score="0.774">
            <gDNA_exon_boundary e_start="30920" e_stop="30890" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36283" stop="36013"/>
              <exon start="35476" stop="35179"/>
              <exon start="30920" stop="30890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36283" stop="36013"/>
              <exon start="35476" stop="35182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36282" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36282" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36280" stop="36013"/>
              <exon start="35476" stop="35360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36278" stop="36013"/>
              <exon start="35476" stop="35193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36266" stop="36013"/>
              <exon start="35476" stop="35180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36255" stop="36013"/>
              <exon start="35476" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36233" stop="36013"/>
              <exon start="35476" stop="35198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36232" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36225" stop="36013"/>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36212" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36162" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36155" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36083" stop="36013"/>
              <exon start="35476" stop="35199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35476" stop="35201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342719" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="13" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGAGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCT : AATTGTTTTACCAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> A  E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L :   I  V  L  P  K  K  K  K  K  K </first_frame>
            <second_frame>  Q  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I   : *  L  F  Y  Q  K  K  K  K  K   </second_frame>
            <third_frame>   R  E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  :  N  C  F  T  K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="13" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="14">
          <exon_coordinates>
            <exon e_start="37138" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35202"/>
            <exon e_start="34909" e_stop="34902"/>
            <exon e_start="33599" e_stop="33588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.313" e_score="1.000"/>
          <exon-intron don_prob="0.083" acc_prob="0.854" e_score="0.625"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37138" e_stop="37085" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35202" e_length="275"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.313">
            <gDNA_intron_boundary i_start="35201" i_stop="34910" i_length="292"/>
          </intron>
          <exon e_serial="4" e_score="0.625">
            <gDNA_exon_boundary e_start="34909" e_stop="34902" e_length="8"/>
          </exon>
          <intron i_serial="4" don_prob="0.083" acc_prob="0.854">
            <gDNA_intron_boundary i_start="34901" i_stop="33600" i_length="1302"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="33599" e_stop="33588" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37138" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37125" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37107" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37105" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35202"/>
              <exon start="34909" stop="34902"/>
              <exon start="33599" stop="33588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36275" stop="36013"/>
              <exon start="35476" stop="35205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36142" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36047" stop="36013"/>
              <exon start="35476" stop="35203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36045" stop="36013"/>
              <exon start="35476" stop="35202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220198" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="14" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAAC : TATAACAA : AAAAAAATGATT</gDNA_template>
            <first_frame> Y  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T :   I  T   : K  K  N  D  </first_frame>
            <second_frame>  I  F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K   : L  *  Q  :  K  K  M  I </second_frame>
            <third_frame>   F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  :  Y  N  K :   K  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="14" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="15">
          <exon_coordinates>
            <exon e_start="37136" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35220"/>
            <exon e_start="34909" e_stop="34902"/>
            <exon e_start="30909" e_stop="30888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.313" e_score="1.000"/>
          <exon-intron don_prob="0.083" acc_prob="0.000" e_score="0.625"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37136" e_stop="37085" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35220" e_length="257"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.313">
            <gDNA_intron_boundary i_start="35219" i_stop="34910" i_length="310"/>
          </intron>
          <exon e_serial="4" e_score="0.625">
            <gDNA_exon_boundary e_start="34909" e_stop="34902" e_length="8"/>
          </exon>
          <intron i_serial="4" don_prob="0.083" acc_prob="0.000">
            <gDNA_intron_boundary i_start="34901" i_stop="30910" i_length="3992"/>
          </intron>
          <exon e_serial="5" e_score="0.955">
            <gDNA_exon_boundary e_start="30909" e_stop="30888" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37112" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="36013"/>
              <exon start="35476" stop="35222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36043" stop="36013"/>
              <exon start="35476" stop="35220"/>
              <exon start="34909" stop="34902"/>
              <exon start="30909" stop="30888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611340" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="15" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGT : TATAACAA : CAAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  :  Y  N  N :   K  K  K  K  K  K  K </first_frame>
            <second_frame>  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V :   I  T   : T  K  K  K  K  K  K   </second_frame>
            <third_frame>   F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L   : L  *  Q  :  Q  K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="15" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="16">
          <exon_coordinates>
            <exon e_start="37136" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35231"/>
            <exon e_start="30907" e_stop="30888"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37136" e_stop="37085" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35476" e_stop="35231" e_length="246"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35230" i_stop="30908" i_length="4323"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="30907" e_stop="30888" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37100" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35231"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="36013"/>
              <exon start="35476" stop="35231"/>
              <exon start="30907" stop="30888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="16" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCC : AAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T   : Q  K  K  K  K  K  K </first_frame>
            <second_frame>  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  :  K  K  K  K  K  K   </second_frame>
            <third_frame>   F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P :   K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="16" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="17">
          <exon_coordinates>
            <exon e_start="37136" e_stop="37085"/>
            <exon e_start="36279" e_stop="36013"/>
            <exon e_start="35476" e_stop="35232"/>
            <exon e_start="30909" e_stop="30889"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37136" e_stop="37085" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36013" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.992">
            <gDNA_intron_boundary i_start="36012" i_stop="35477" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="35476" e_stop="35232" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35231" i_stop="30910" i_length="4322"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="30909" e_stop="30889" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37136" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37111" stop="37085"/>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36013"/>
              <exon start="35476" stop="35376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36279" stop="36041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36271" stop="36013"/>
              <exon start="35476" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36261" stop="36013"/>
              <exon start="35476" stop="35440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36226" stop="36013"/>
              <exon start="35476" stop="35354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36197" stop="36013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36057" stop="36013"/>
              <exon start="35476" stop="35269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36053" stop="36013"/>
              <exon start="35476" stop="35232"/>
              <exon start="30909" stop="30889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232639" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="17" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTCCCCACCGGCCCCCCTCCTCTGTCTATCGCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAGCTGCTGCTGCACAACCTGTGGATAACACCAAGAATGTACCAGCAGGCATTCACAGTAACAACACAAACAACTATTTTCGTGCTGATGGCCAGAACTGCGGCAACTTTCTAACG : GAAAGGCGTTCAACCAAGGTCCAAGCAGCACCTGGTGGTGGATCTTCCTTGGGTTATTTATTTGGTGACGGCAGCAGCAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACC : CAAAAAAAAAAAAAAAAAAAA</gDNA_template>
            <first_frame> F  S  P  P  A  P  L  L  C  L  S  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S  C  C  C  T  T  C  G  *  H  Q  E  C  T  S  R  H  S  Q  *  Q  H  K  Q  L  F  S  C  *  W  P  E  L  R  Q  L  S  N   : G  K  A  F  N  Q  G  P  S  S  T  W  W  W  I  F  L  G  L  F  I  W  *  R  Q  Q  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  :  Q  K  K  K  K  K  K </first_frame>
            <second_frame>  F  P  H  R  P  P  S  S  V  Y  R  F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P  A  A  A  A  Q  P  V  D  N  T  K  N  V  P  A  G  I  H  S  N  N  T  N  N  Y  F  R  A  D  G  Q  N  C  G  N  F  L  T  :  E  R  R  S  T  K  V  Q  A  A  P  G  G  G  S  S  L  G  Y  L  F  G  D  G  S  S  K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P :   K  K  K  K  K  K   </second_frame>
            <third_frame>   F  P  T  G  P  P  P  L  S  I  A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  L  L  L  H  N  L  W  I  T  P  R  M  Y  Q  Q  A  F  T  V  T  T  Q  T  T  I  F  V  L  M  A  R  T  A  A  T  F  *  R :   K  G  V  Q  P  R  S  K  Q  H  L  V  V  D  L  P  W  V  I  Y  L  V  T  A  A  A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y   : P  K  K  K  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="17" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36013"/>
                    <exon start="35476" stop="35393"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPAAAAQPVDNTKNVPAGIHSNNTNNYFRADGQNCGNFLTERRSTKVQAAPGGGSSLGYLFGDGSSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="18">
          <exon_coordinates>
            <exon e_start="37104" e_stop="37085"/>
            <exon e_start="36279" e_stop="36126"/>
            <exon e_start="35399" e_stop="35151"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37104" e_stop="37085" e_length="20"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37084" i_stop="36280" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36126" e_length="154"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="36125" i_stop="35400" i_length="726"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35399" e_stop="35151" e_length="249"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37104" stop="37085"/>
              <exon start="36279" stop="36126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36196" stop="36126"/>
              <exon start="35399" stop="35188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35368" stop="35151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292959" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="18" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTCGGAATTATACCAAAG : AGAAATTAATCGTTAAGGATGGGCCGCGGAGTGAGTGCTGGGGGCGGTCAGAGTTCCTTGGGCTACCTGTTTGGAAGTGGAGAGCCTGCTAACAATTCTCAGACTGCTCGCAACCAGGAAAAGGCTCCGACTAATGAGCCTGTCTCAAGGCCAG : CAAGTGATGTCACTGGACATCAAGTTTCAAAAGTTTGCTTTCCCAGTTATGTTGAAAGTATGAATGGATTTCGTTTACTGCAAATTTGAAACTTCTTTTCACAATTGTAATAGTGTCTAATTGACACTGGATTCAAACTGCTATGTAAGTGCTGAATGCTGTATTACCCATTATTTCTGTATCATGCGAGTTAAAAACACACTTTTTCTTTAGTTTAATCTGTTGATGTGGAAATGATGTCATCCTTTT</gDNA_template>
            <first_frame> A  S  E  L  Y  Q  R :   E  I  N  R  *  G  W  A  A  E  *  V  L  G  A  V  R  V  P  W  A  T  C  L  E  V  E  S  L  L  T  I  L  R  L  L  A  T  R  K  R  L  R  L  M  S  L  S  Q  G  Q  :  Q  V  M  S  L  D  I  K  F  Q  K  F  A  F  P  V  M  L  K  V  *  M  D  F  V  Y  C  K  F  E  T  S  F  H  N  C  N  S  V  *  L  T  L  D  S  N  C  Y  V  S  A  E  C  C  I  T  H  Y  F  C  I  M  R  V  K  N  T  L  F  L  *  F  N  L  L  M  W  K  *  C  H  P  F </first_frame>
            <second_frame>  L  R  N  Y  T  K   : E  K  L  I  V  K  D  G  P  R  S  E  C  W  G  R  S  E  F  L  G  L  P  V  W  K  W  R  A  C  *  Q  F  S  D  C  S  Q  P  G  K  G  S  D  *  *  A  C  L  K  A  S :   K  *  C  H  W  T  S  S  F  K  S  L  L  S  Q  L  C  *  K  Y  E  W  I  S  F  T  A  N  L  K  L  L  F  T  I  V  I  V  S  N  *  H  W  I  Q  T  A  M  *  V  L  N  A  V  L  P  I  I  S  V  S  C  E  L  K  T  H  F  F  F  S  L  I  C  *  C  G  N  D  V  I  L   </second_frame>
            <third_frame>   F  G  I  I  P  K  :  R  N  *  S  L  R  M  G  R  G  V  S  A  G  G  G  Q  S  S  L  G  Y  L  F  G  S  G  E  P  A  N  N  S  Q  T  A  R  N  Q  E  K  A  P  T  N  E  P  V  S  R  P   : A  S  D  V  T  G  H  Q  V  S  K  V  C  F  P  S  Y  V  E  S  M  N  G  F  R  L  L  Q  I  *  N  F  F  S  Q  L  *  *  C  L  I  D  T  G  F  K  L  L  C  K  C  *  M  L  Y  Y  P  L  F  L  Y  H  A  S  *  K  H  T  F  S  L  V  *  S  V  D  V  E  M  M  S  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="18" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36270" stop="36126"/>
                    <exon start="35399" stop="35311"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLRMGRGVSAGGGQSSLGYLFGSGEPANNSQTARNQEKAPTNEPVSRPASDVTGHQVSKVCFPSYVESMNGFRLLQI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="34245" PGL_stop="34655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34245" e_stop="34283"/>
            <exon e_start="34350" e_stop="34655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.996" e_score="0.909"/>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="34245" e_stop="34283" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.996">
            <gDNA_intron_boundary i_start="34284" i_stop="34349" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="0.938">
            <gDNA_exon_boundary e_start="34350" e_stop="34655" e_length="306"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34245" stop="34283"/>
              <exon start="34350" stop="34655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34251" stop="34283"/>
              <exon start="34350" stop="34655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619247" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCGAGTCTGTCTCGTAGGCCAAGGCAGAACCGAAAATG : CCTTCACACAAGACATTCATCTTAAAGAAGAAGCTGTCGAAGAAACAGAGGCAAAACAGGCCTATTTCCTTATTGGATCCGCATGGGCACTGACAACACCATCCGCTACAACGCCAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGATTCTAAGGATACATACATTTTAGGGCCAGGGCCTTCGAGTTTGGTTTTTATTTTTAGAATTAGGACTTCAATTTTCGATCTATGTGCAAAATTTGCATTAAGTTTCACTGTGATGTTTGCTACTTAATTAAAAGTTGATATCATATTTCGTTTATCGC</gDNA_template>
            <first_frame> L  E  S  V  S  *  A  K  A  E  P  K  M  :  P  S  H  K  T  F  I  L  K  K  K  L  S  K  K  Q  R  Q  N  R  P  I  S  L  L  D  P  H  G  H  *  Q  H  H  P  L  Q  R  Q  A  Q  A  L  A  P  H  Q  A  R  I  L  R  I  H  T  F  *  G  Q  G  L  R  V  W  F  L  F  L  E  L  G  L  Q  F  S  I  Y  V  Q  N  L  H  *  V  S  L  *  C  L  L  L  N  *  K  L  I  S  Y  F  V  Y  R </first_frame>
            <second_frame>  S  S  L  S  R  R  P  R  Q  N  R  K  C :   L  H  T  R  H  S  S  *  R  R  S  C  R  R  N  R  G  K  T  G  L  F  P  Y  W  I  R  M  G  T  D  N  T  I  R  Y  N  A  K  R  R  H  W  R  R  T  K  L  G  F  *  G  Y  I  H  F  R  A  R  A  F  E  F  G  F  Y  F  *  N  *  D  F  N  F  R  S  M  C  K  I  C  I  K  F  H  C  D  V  C  Y  L  I  K  S  *  Y  H  I  S  F  I   </second_frame>
            <third_frame>   R  V  C  L  V  G  Q  G  R  T  E  N   : A  F  T  Q  D  I  H  L  K  E  E  A  V  E  E  T  E  A  K  Q  A  Y  F  L  I  G  S  A  W  A  L  T  T  P  S  A  T  T  P  S  A  G  T  G  A  A  P  S  S  D  S  K  D  T  Y  I  L  G  P  G  P  S  S  L  V  F  I  F  R  I  R  T  S  I  F  D  L  C  A  K  F  A  L  S  F  T  V  M  F  A  T  *  L  K  V  D  I  I  F  R  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34247" stop="34283"/>
                    <exon start="34350" stop="34624"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVCLVGQGRTENAFTQDIHLKEEAVEETEAKQAYFLIGSAWALTTPSATTPSAGTGAAPSSDSKDTYILGPGPSSLVFIFRIRTSIFDLCAKFALSFTVMFAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="35181" PGL_stop="36283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35181" e_stop="35399"/>
            <exon e_start="36126" e_stop="36276"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.973"/>
          <exon-only e_score="0.954"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="35181" e_stop="35399" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35400" i_stop="36125" i_length="726"/>
          </intron>
          <exon e_serial="2" e_score="0.954">
            <gDNA_exon_boundary e_start="36126" e_stop="36276" e_length="151"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35181" stop="35399"/>
              <exon start="36126" stop="36276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217168" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAAACTAAAGAAAAAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTG : CTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAATT</gDNA_template>
            <first_frame> I  K  L  K  K  K  C  V  F  N  S  H  D  T  E  I  M  G  N  T  A  F  S  T  Y  I  A  V  *  I  Q  C  Q  L  D  T  I  T  I  V  K  R  S  F  K  F  A  V  N  E  I  H  S  Y  F  Q  H  N  W  E  S  K  L  L  K  L  D  V  Q  *  H  H  L  :  L  A  L  R  Q  A  H  *  S  E  P  F  P  G  C  E  Q  S  E  N  C  *  Q  A  L  H  F  Q  T  G  S  P  R  N  S  D  R  P  Q  H  S  L  R  G  P  S  L  T  I  N  </first_frame>
            <second_frame>  L  N  *  R  K  S  V  F  L  T  R  M  I  Q  K  *  W  V  I  Q  H  S  A  L  T  *  Q  F  E  S  S  V  N  *  T  L  L  Q  L  *  K  E  V  S  N  L  Q  *  T  K  S  I  H  T  F  N  I  T  G  K  A  N  F  *  N  L  M  S  S  D  I  T  C :   W  P  *  D  R  L  I  S  R  S  L  F  L  V  A  S  S  L  R  I  V  S  R  L  S  T  S  K  Q  V  A  Q  G  T  L  T  A  P  S  T  H  S  A  A  H  P  *  R  L  I </second_frame>
            <third_frame>   *  T  K  E  K  V  C  F  *  L  A  *  Y  R  N  N  G  *  Y  S  I  Q  H  L  H  S  S  L  N  P  V  S  I  R  H  Y  Y  N  C  E  K  K  F  Q  I  C  S  K  R  N  P  F  I  L  S  T  *  L  G  K  Q  T  F  E  T  *  C  P  V  T  S  L   : A  G  L  E  T  G  S  L  V  G  A  F  S  W  L  R  A  V  *  E  L  L  A  G  S  P  L  P  N  R  *  P  K  E  L  *  P  P  P  A  L  T  P  R  P  I  L  N  D  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="36041" e_stop="36283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="36041" e_stop="36283" e_length="243"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36041" stop="36283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280237" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGCACGAAAATAGTTGTTTGTGTTGTTACTGTGAATGCCTGCTGGTACATTCTTGGTGTTATCCACAGGTTGTGCAGCAGCAGCTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAATTTCTCTGC</gDNA_template>
            <first_frame> S  A  R  K  *  L  F  V  L  L  L  *  M  P  A  G  T  F  L  V  L  S  T  G  C  A  A  A  A  G  L  E  T  G  S  L  V  G  A  F  S  W  L  R  A  V  *  E  L  L  A  G  S  P  L  P  N  R  *  P  K  E  L  *  P  P  P  A  L  T  P  R  P  I  L  N  D  *  F  L  C </first_frame>
            <second_frame>  Q  H  E  N  S  C  L  C  C  Y  C  E  C  L  L  V  H  S  W  C  Y  P  Q  V  V  Q  Q  Q  L  A  L  R  Q  A  H  *  S  E  P  F  P  G  C  E  Q  S  E  N  C  *  Q  A  L  H  F  Q  T  G  S  P  R  N  S  D  R  P  Q  H  S  L  R  G  P  S  L  T  I  N  F  S   </second_frame>
            <third_frame>   S  T  K  I  V  V  C  V  V  T  V  N  A  C  W  Y  I  L  G  V  I  H  R  L  C  S  S  S  W  P  *  D  R  L  I  S  R  S  L  F  L  V  A  S  S  L  R  I  V  S  R  L  S  T  S  K  Q  V  A  Q  G  T  L  T  A  P  S  T  H  S  A  A  H  P  *  R  L  I  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="44761" PGL_stop="41468"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44761" e_stop="44607"/>
            <exon e_start="43772" e_stop="43629"/>
            <exon e_start="42657" e_stop="42526"/>
            <exon e_start="41924" e_stop="41468"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.649" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44761" e_stop="44607" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="44606" i_stop="43773" i_length="834"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43772" e_stop="43629" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.649">
            <gDNA_intron_boundary i_start="43628" i_stop="42658" i_length="971"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42657" e_stop="42526" e_length="132"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.991">
            <gDNA_intron_boundary i_start="42525" i_stop="41925" i_length="601"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="41924" e_stop="41468" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44761" stop="44607"/>
              <exon start="43772" stop="43629"/>
              <exon start="42657" stop="42526"/>
              <exon start="41924" stop="41468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726451" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAG : GTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAG : ACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAG : GATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAATTCCCTTTACTCGGGAAAA</gDNA_template>
            <first_frame> P  L  H  F  *  K  K  L  D  L  K  L  L  Q  L  I  *  P  V  Q  A  F  I  L  S  T  Q  I  A  S  Q  A  Y  R  N  M  Y  S  R  S  L  I  F  L  R  S  L  L  M  E  K  R :   *  F  W  W  D  M  I  L  A  V  P  V  Y  P  L  R  W  S  A  I  P  L  R  F  R  K  L  C  L  L  L  L  Q  C  S  L  V  D  K  V  P  L  I  C  S  H  K  R :   Q  I  Q  M  T  L  *  D  S  L  K  Y  L  F  M  P  M  G  T  T  S  L  Q  L  L  L  I  W  T  S  H  S  S  G  T  C  Y  S  T  I  V  L  L  R :   M  L  H  *  H  L  C  Q  *  G  Q  F  P  F  P  Q  F  W  R  S  F  V  Y  P  T  P  S  M  V  V  L  G  G  F  M  *  K  R  Q  K  I  M  R  Y  Q  K  P  Y  S  R  I  *  L  A  I  I  L  Q  N  K  F  F  I  S  R  V  L  I  T  R  L  F  S  P  S  L  K  V  Y  I  G  Y  W  *  R  S  P  G  F  H  K  L  G  S  C  F  A  E  F  L  I  I  R  K  V  T  P  T  Q  M  *  Q  S  Y  C  C  V  N  *  P  C  G  M  P  I  G  V  H  V  R  F  I  Q  L  L  C  S  I  C  Y  T  *  D  S  E  N  S  L  Y  S  G  K </first_frame>
            <second_frame>  H  C  T  F  R  R  S  W  I  *  S  Y  C  S  *  F  N  R  F  R  H  S  F  F  R  H  K  *  H  R  K  P  I  A  I  C  T  A  A  H  *  F  S  *  E  A  C  *  W  R  K   : G  D  F  G  G  T  *  F  W  R  C  L  Y  I  L  C  D  G  A  P  S  P  *  G  F  E  S  C  V  C  C  C  C  N  A  H  *  W  T  K  C  P  *  Y  V  L  T  K   : D  R  F  K  *  P  Y  E  T  V  S  N  I  Y  L  C  Q  W  E  R  Q  A  S  N  C  Y  *  F  G  Q  V  T  P  Q  G  L  V  I  Q  P  *  S  C  *   : G  C  C  I  S  I  C  V  N  E  A  N  S  L  F  P  S  F  G  E  A  L  S  I  R  L  Q  V  W  L  C  *  A  V  L  C  R  N  D  R  R  *  C  D  T  K  S  L  T  A  E  S  N  *  Q  *  S  S  R  T  S  F  S  S  Q  G  C  *  S  L  A  F  F  L  Q  A  S  R  S  T  *  D  T  G  R  D  L  Q  D  S  I  N  L  E  V  V  L  L  N  S  L  L  L  E  K  S  H  R  H  K  C  S  K  V  I  V  V  *  I  N  H  V  E  C  L  L  V  Y  M  F  G  L  S  N  Y  F  V  P  F  A  I  L  E  T  V  R  I  P  F  T  R  E   </second_frame>
            <third_frame>   I  A  L  L  E  E  A  G  F  K  V  T  A  V  D  L  T  G  S  G  I  H  S  F  D  T  N  S  I  A  S  L  S  Q  Y  V  Q  P  L  T  D  F  L  E  K  L  A  D  G  E  K  :  V  I  L  V  G  H  D  F  G  G  A  C  I  S  F  A  M  E  R  H  P  L  K  V  S  K  A  V  F  V  A  A  A  M  L  T  S  G  Q  S  A  L  D  M  F  S  Q  K  :  T  D  S  N  D  L  M  R  Q  S  Q  I  F  I  Y  A  N  G  N  D  K  P  P  T  A  I  D  L  D  K  S  L  L  R  D  L  L  F  N  H  S  P  A  K  :  D  V  A  L  A  S  V  S  M  R  P  I  P  F  S  P  V  L  E  K  L  C  L  S  D  S  K  Y  G  C  V  R  R  F  Y  V  E  T  T  E  D  N  A  I  P  K  A  L  Q  Q  N  L  I  S  N  N  P  P  E  Q  V  F  H  L  K  G  A  D  H  S  P  F  F  S  K  P  Q  G  L  H  R  I  L  V  E  I  S  R  I  P  *  T  W  K  L  F  C  *  I  P  Y  Y  *  K  S  H  T  D  T  N  V  A  K  L  L  L  C  K  L  T  M  W  N  A  Y  W  C  T  C  S  V  Y  P  I  T  L  F  H  L  L  Y  L  R  Q  *  E  F  P  L  L  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44759" stop="44607"/>
                    <exon start="43772" stop="43629"/>
                    <exon start="42657" stop="42526"/>
                    <exon start="41924" stop="41652"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALLEEAGFKVTAVDLTGSGIHSFDTNSIASLSQYVQPLTDFLEKLADGEKVILVGHDFGGACISFAMERHPLKVSKAVFVAAAMLTSGQSALDMFSQKTDSNDLMRQSQIFIYANGNDKPPTAIDLDKSLLRDLLFNHSPAKDVALASVSMRPIPFSPVLEKLCLSDSKYGCVRRFYVETTEDNAIPKALQQNLISNNPPEQVFHLKGADHSPFFSKPQGLHRILVEISRIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="46785" PGL_stop="46450"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46785" e_stop="46450"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46785" e_stop="46450" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46785" stop="46526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46782" stop="46450"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204294" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGG</gDNA_template>
            <first_frame> G  I  A  N  H  L  H  L  S  Q  L  S  T  A  L  G  K  H  Q  I  L  V  R  I  R  N  S  Y  C  T  Y  L  C  K  S  V  A  C  E  Y  Q  S  I  R  N  G  H  V  F  I  T  E  F  R  P  R  E  E  A  A  I  Q  T  F  N  E  S  I  G  G  R  R  *  W  R  W  E  Q  Q  V  V  *  E  S  I  V  *  E  R  R  F  H  H  S  G  A  S  S  R  R  R  D  S  P  T  A  A  N  A  K  R  R </first_frame>
            <second_frame>  V  L  L  T  I  F  I  S  L  N  S  Q  L  L  W  E  S  I  K  Y  L  Y  V  Y  V  I  L  I  V  H  I  S  V  N  L  L  H  V  N  I  N  Q  S  E  M  G  M  C  L  S  R  S  S  G  P  V  K  K  R  Q  S  K  R  L  T  N  Q  S  A  A  A  V  N  G  G  G  S  N  R  W  S  R  N  R  S  S  K  R  D  D  S  I  I  Q  E  R  A  L  A  A  A  I  L  L  Q  Q  Q  M  Q  N  G   </second_frame>
            <third_frame>   Y  C  *  P  S  S  S  L  S  T  L  N  C  F  G  K  A  S  N  T  C  T  Y  T  *  F  L  L  Y  I  S  L  *  I  C  C  M  *  I  S  I  N  Q  K  W  A  C  V  Y  H  G  V  P  A  P  *  R  S  G  N  P  N  V  *  R  I  N  R  R  P  P  L  M  A  V  G  A  T  G  G  L  G  I  D  R  L  R  E  T  I  P  S  F  R  S  E  L  S  P  P  R  F  S  Y  S  S  K  C  K  T  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46784" stop="46452"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLLTIFISLNSQLLWESIKYLYVYVILIVHISVNLLHVNINQSEMGMCLSRSSGPVKKRQSKRLTNQSAAAVNGGGSNRWSRNRSSKRDDSIIQERALAAAILLQQQMQNG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="69875" PGL_stop="62709"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69862" e_stop="69807"/>
            <exon e_start="68945" e_stop="68902"/>
            <exon e_start="66590" e_stop="66411"/>
            <exon e_start="65256" e_stop="65194"/>
            <exon e_start="65002" e_stop="64963"/>
            <exon e_start="63105" e_stop="62835"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69862" e_stop="69807" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68945" e_stop="68902" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="66590" e_stop="66411" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65256" e_stop="65194" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.892">
            <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="65002" e_stop="64963" e_length="40"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="63105" e_stop="62835" e_length="271"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69862" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69862" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69861" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69861" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69861" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69861" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="63008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69861" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69852" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368179" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</gDNA_template>
            <first_frame> R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : *  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L  T  Y  S  V  P  L </first_frame>
            <second_frame>  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S  H  T  L  F  L   </second_frame>
            <third_frame>   E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H  I  L  C  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="69875" e_stop="69807"/>
            <exon e_start="68945" e_stop="68902"/>
            <exon e_start="66921" e_stop="66841"/>
            <exon e_start="66590" e_stop="66411"/>
            <exon e_start="65256" e_stop="65194"/>
            <exon e_start="65009" e_stop="64963"/>
            <exon e_start="63105" e_stop="62851"/>
            <exon e_start="62746" e_stop="62709"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.855" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-only e_score="0.553"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69875" e_stop="69807" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68945" e_stop="68902" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.901">
            <gDNA_intron_boundary i_start="68901" i_stop="66922" i_length="1980"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="66921" e_stop="66841" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.855" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66840" i_stop="66591" i_length="250"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66590" e_stop="66411" e_length="180"/>
          </exon>
          <intron i_serial="4" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="65256" e_stop="65194" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.980" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65193" i_stop="65010" i_length="184"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="65009" e_stop="64963" e_length="47"/>
          </exon>
          <intron i_serial="6" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857"/>
          </intron>
          <exon e_serial="7" e_score="0.996">
            <gDNA_exon_boundary e_start="63105" e_stop="62851" e_length="255"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="62850" i_stop="62747" i_length="104"/>
          </intron>
          <exon e_serial="8" e_score="0.553">
            <gDNA_exon_boundary e_start="62746" e_stop="62709" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69875" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66921" stop="66841"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65009" stop="64963"/>
              <exon start="63105" stop="62851"/>
              <exon start="62746" stop="62709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542896" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : AGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : CAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCAC : AAAATCTAAATAAAATGAAAAGACACTTCTATTATCTG</gDNA_template>
            <first_frame> I  I  I  L  K  E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   V  E  K  I  Q  R  N  E  D  K  Y  N  T  A  T  N  F  G  E  Q  H  N  *  W  I  D  W :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   N  K  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S   : Q  N  L  N  K  M  K  R  H  F  Y  Y  L </first_frame>
            <second_frame>  S  S  Y  *  R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : E  W  K  R  F  K  G  M  R  I  N  I  T  Q  L  L  I  L  G  S  S  I  I  D  G  L  I   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : S  T  R  T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H  :  K  I  *  I  K  *  K  D  T  S  I  I   </second_frame>
            <third_frame>   H  H  I  E  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  S  G  K  D  S  K  E  *  G  *  I  *  H  S  Y  *  F  W  G  A  A  *  L  M  D  *  L  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  Q  Q  E  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L  T :   K  S  K  *  N  E  K  T  L  L  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="84802" PGL_stop="70318"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81880" e_stop="81074"/>
            <exon e_start="80971" e_stop="80816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.378" acc_prob="0.637" e_score="0.961"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="81880" e_stop="81074" e_length="807"/>
          </exon>
          <intron i_serial="1" don_prob="0.378" acc_prob="0.637">
            <gDNA_intron_boundary i_start="81073" i_stop="80972" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80971" e_stop="80816" e_length="156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81880" stop="81488"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81826" stop="81104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81826" stop="81110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81826" stop="81189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81819" stop="81173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81591" stop="81074"/>
              <exon start="80971" stop="80905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81590" stop="81074"/>
              <exon start="80971" stop="80829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81590" stop="81074"/>
              <exon start="80971" stop="80932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81529" stop="81074"/>
              <exon start="80971" stop="80819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81528" stop="81074"/>
              <exon start="80971" stop="80816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGACATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATGTATTTGTTAGAAATGCTGCTCATCCCAGCTCAGAATTTCTACTTTGTGTGTCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAAGGAAAATAAAAAGAAGTTTGAATGTTGATATATACCGTCCTTAAGCTGACTTTTCTAAACGATGCTTCACAATCAAGCTAGAAAATGACTAAGCAAGTGCTGTCCTAATGAAATGGTGGACTGAAGAGTGCACTGGTAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACCCCCATTCATCTAATGTTTTTCCTAAGGAGGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTGCCTGTTAATTTCCAGATGGGAGGAATTTTTAATAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTGATGCATGAGAGAAGGAAACCATTTATGCGGAGCGGTTCTTTGTGCAGAAGCCTGATACATGATGGATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAGA : GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</gDNA_template>
            <first_frame> T  F  *  D  Y  W  I  L  F  H  *  L  L  C  L  I  M  Q  T  F  C  Y  E  L  D  *  E  A  I  N  G  M  L  C  I  C  *  K  C  C  S  S  Q  L  R  I  S  T  L  C  V  I  C  R  L  R  E  E  *  F  E  L  L  S  Q  K  G  K  *  K  E  V  *  M  L  I  Y  T  V  L  K  L  T  F  L  N  D  A  S  Q  S  S  *  K  M  T  K  Q  V  L  S  *  *  N  G  G  L  K  S  A  L  V  G  V  R  F  D  L  H  R  L  F  G  G  D  V  L  L  K  S  M  I  L  S  P  D  S  S  V  K  S  Y  V  Q  V  C  Q  L  I  S  L  L  L  I  D  S  W  C  E  L  E  I  Q  K  R  C  A  P  P  F  I  *  C  F  S  *  G  G  *  F  P  G  *  *  I  Q  C  F  R  *  L  A  P  V  V  D  Q  T  A  C  *  F  P  D  G  R  N  F  *  *  L  *  L  A  D  Q  Q  R  M  S  H  L  R  N  L  L  Y  L  I  T  V  Q  M  *  C  M  R  E  G  N  H  L  C  G  A  V  L  C  A  E  A  *  Y  M  M  D  H  L  L  I  V  M  K  I  L  S  L  K  R  :  V  R  K  Y  D  L  R  S  F  A  G  A  K  L  R  A  R  H  C  R  V  K  I  D  S  E  K  S  A  L  T  R  T  F  *  K  N  T  I  I  G  W  T  S  L  N  R  L  L  K  C  M </first_frame>
            <second_frame>  L  F  R  I  T  G  S  C  F  T  D  Y  F  V  *  *  C  R  H  F  A  M  N  W  I  R  K  L  S  M  A  C  Y  V  F  V  R  N  A  A  H  P  S  S  E  F  L  L  C  V  S  Y  V  G  *  E  R  S  S  L  N  Y  Y  L  K  K  E  N  K  K  K  F  E  C  *  Y  I  P  S  L  S  *  L  F  *  T  M  L  H  N  Q  A  R  K  *  L  S  K  C  C  P  N  E  M  V  D  *  R  V  H  W  *  E  *  D  S  I  F  T  D  Y  S  V  G  M  C  F  *  K  A  *  S  *  V  Q  I  P  L  S  N  H  T  F  K  S  V  N  *  F  L  S  C  S  L  T  V  G  V  N  W  K  S  R  N  A  A  H  P  H  S  S  N  V  F  P  K  E  G  D  F  L  D  N  K  F  S  A  S  G  S  *  L  Q  L  *  I  R  L  P  V  N  F  Q  M  G  G  I  F  N  N  C  S  W  Q  I  N  R  E  C  L  I  *  G  I  S  C  T  *  *  Q  F  K  C  D  A  *  E  K  E  T  I  Y  A  E  R  F  F  V  Q  K  P  D  T  *  W  I  I  F  *  *  L  *  R  Y  *  V  *  K  E :   *  G  N  M  I  *  E  V  L  L  G  Q  N  *  E  Q  G  I  A  E  S  K  *  I  Q  K  S  L  H  *  P  G  H  S  R  R  I  R  S  S  D  G  L  L  *  T  D  C  *  N  V   </second_frame>
            <third_frame>   F  L  G  L  L  D  L  V  S  L  I  T  L  S  D  N  A  D  I  L  L  *  T  G  L  G  S  Y  Q  W  H  V  M  Y  L  L  E  M  L  L  I  P  A  Q  N  F  Y  F  V  C  H  M  *  V  K  R  G  V  V  *  I  I  I  S  K  R  K  I  K  R  S  L  N  V  D  I  Y  R  P  *  A  D  F  S  K  R  C  F  T  I  K  L  E  N  D  *  A  S  A  V  L  M  K  W  W  T  E  E  C  T  G  R  S  E  I  R  S  S  Q  I  I  R  W  G  C  A  S  E  K  H  D  P  E  S  R  F  L  C  Q  I  I  R  S  S  L  S  I  D  F  S  L  A  H  *  Q  L  V  *  T  G  N  P  E  T  L  R  T  P  I  H  L  M  F  F  L  R  R  V  I  S  W  I  I  N  S  V  L  Q  V  A  S  S  S  C  R  S  D  C  L  L  I  S  R  W  E  E  F  L  I  I  V  A  G  R  S  T  E  N  V  S  F  K  E  S  L  V  L  D  N  S  S  N  V  M  H  E  R  R  K  P  F  M  R  S  G  S  L  C  R  S  L  I  H  D  G  S  S  F  D  S  Y  E  D  I  K  F  E  K   : S  K  E  I  *  F  E  K  F  C  W  G  K  T  K  S  K  A  L  Q  S  Q  N  R  F  R  K  V  C  I  N  Q  D  I  L  E  E  Y  D  H  R  M  D  F  F  E  Q  T  A  E  M  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81404" stop="81074"/>
                    <exon start="80971" stop="80958"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGNPETLRTPIHLMFFLRRVISWIINSVLQVASSSCRSDCLLISRWEEFLIIVAGRSTENVSFKESLVLDNSSNVMHERRKPFMRSGSLCRSLIHDGSSFDSYEDIKFEKSKEI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="80594" e_stop="80197"/>
            <exon e_start="80107" e_stop="79991"/>
            <exon e_start="79887" e_stop="79792"/>
            <exon e_start="78624" e_stop="78360"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80594" e_stop="80197" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80107" e_stop="79991" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="79887" e_stop="79792" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="78624" e_stop="78360" e_length="265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80594" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80594" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80550" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80530" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80258" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80101" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCT</gDNA_template>
            <first_frame> Q  N  L  I  L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  N  S  F  Y  G  S  P  F  I  I  V  *  Y  K  I  I  L  Y  H  N  F  L  N  I  *  I  A </first_frame>
            <second_frame>  K  I  *  S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  Q  I  L  S  M  V  L  L  L  *  S  F  N  I  K  L  F  C  I  I  I  F  *  I  Y  K  L   </second_frame>
            <third_frame>   K  F  D  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  K  F  F  L  W  F  S  F  Y  N  R  L  I  *  N  Y  F  V  S  *  F  F  K  Y  I  N  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80594" stop="80337"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLILICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79848" stop="79792"/>
                    <exon start="78624" stop="78445"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFHLYFFIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80037" stop="79991"/>
                    <exon start="79887" stop="79792"/>
                    <exon start="78624" stop="78555"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="80594" e_stop="80197"/>
            <exon e_start="80107" e_stop="79991"/>
            <exon e_start="79887" e_stop="79792"/>
            <exon e_start="78624" e_stop="78442"/>
            <exon e_start="78265" e_stop="78227"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80594" e_stop="80197" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80107" e_stop="79991" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="79887" e_stop="79792" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167"/>
          </intron>
          <exon e_serial="4" e_score="0.967">
            <gDNA_exon_boundary e_start="78624" e_stop="78442" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="78441" i_stop="78266" i_length="176"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="78265" e_stop="78227" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80594" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80594" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80550" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80530" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80359" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78442"/>
              <exon start="78265" stop="78227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80258" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAAC : ATTTTATTTTAAATTATACATAAATATTAACTACGATGC</gDNA_template>
            <first_frame> Q  N  L  I  L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T :   F  Y  F  K  L  Y  I  N  I  N  Y  D   </first_frame>
            <second_frame>  K  I  *  S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F  I  F  F  Y  F  I  K   : H  F  I  L  N  Y  T  *  I  L  T  T  M  </second_frame>
            <third_frame>   K  F  D  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  :  I  L  F  *  I  I  H  K  Y  *  L  R  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80594" stop="80337"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLILICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79848" stop="79792"/>
                    <exon start="78624" stop="78445"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFHLYFFIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80037" stop="79991"/>
                    <exon start="79887" stop="79792"/>
                    <exon start="78624" stop="78555"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="84802" e_stop="84604"/>
            <exon e_start="80400" e_stop="80197"/>
            <exon e_start="80107" e_stop="79991"/>
            <exon e_start="79887" e_stop="79792"/>
            <exon e_start="78624" e_stop="78442"/>
            <exon e_start="78265" e_stop="78227"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.431" e_score="1.000"/>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="0.990"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="0.983"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84802" e_stop="84604" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.431">
            <gDNA_intron_boundary i_start="84603" i_stop="80401" i_length="4203"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="80400" e_stop="80197" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="80107" e_stop="79991" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103"/>
          </intron>
          <exon e_serial="4" e_score="0.979">
            <gDNA_exon_boundary e_start="79887" e_stop="79792" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167"/>
          </intron>
          <exon e_serial="5" e_score="0.967">
            <gDNA_exon_boundary e_start="78624" e_stop="78442" e_length="183"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="78441" i_stop="78266" i_length="176"/>
          </intron>
          <exon e_serial="6" e_score="0.667">
            <gDNA_exon_boundary e_start="78265" e_stop="78227" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84802" stop="84604"/>
              <exon start="80400" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80359" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78442"/>
              <exon start="78265" stop="78227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80258" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGA : GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAAC : ATTTTATTTTAAATTATACATAAATATTAACTACGATGC</gDNA_template>
            <first_frame> R  T  G  S  Y  R  S  I  E  L  A  T  V  A  E  A  E  P  T  G  V  *  N  S  P  P  S  Q  D  R  N  I  I  R  N  R  M  K  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  Q   : R  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F  I  F  F  Y  F  I  K   : H  F  I  L  N  Y  T  *  I  L  T  T  M  </first_frame>
            <second_frame>  E  P  E  A  T  G  V  *  N  S  P  P  S  Q  K  R  N  L  P  E  Y  K  T  R  H  R  R  R  T  G  T  S  Y  A  T  G  *  K  P  L  K  P  N  R  F  S  R  R  Q  L  P  I  M  L  E  F  L  K  N  L  V  T  R  W  Y  R  :  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  :  I  L  F  *  I  I  H  K  Y  *  L  R  C </second_frame>
            <third_frame>   N  R  K  L  P  E  Y  R  T  R  H  R  R  R  S  G  T  Y  R  S  I  K  L  A  T  V  A  G  P  E  H  H  T  Q  P  D  E  N  P  *  N  R  I  D  F  P  A  V  S  F  P  S  C  *  N  S  *  K  I  W  *  L  D  G  T  E :   V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T :   F  Y  F  K  L  Y  I  N  I  N  Y  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79848" stop="79792"/>
                    <exon start="78624" stop="78445"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFHLYFFIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80037" stop="79991"/>
                    <exon start="79887" stop="79792"/>
                    <exon start="78624" stop="78555"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="80594" e_stop="80197"/>
            <exon e_start="80107" e_stop="79991"/>
            <exon e_start="79887" e_stop="79792"/>
            <exon e_start="70600" e_stop="70318"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="0.991"/>
          <exon-intron don_prob="0.712" acc_prob="0.445" e_score="0.948"/>
          <exon-only e_score="0.809"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80594" e_stop="80197" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="80107" e_stop="79991" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="79887" e_stop="79792" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="0.445">
            <gDNA_intron_boundary i_start="79791" i_stop="70601" i_length="9191"/>
          </intron>
          <exon e_serial="4" e_score="0.809">
            <gDNA_exon_boundary e_start="70600" e_stop="70318" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80594" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80411" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="70600" stop="70318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692867" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : AATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGGTGCAATTATGCTTGG</gDNA_template>
            <first_frame> Q  N  L  I  L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   I  R  T  N  K  N  S  K  S  F  L  F  L  G  Q  N  F  R  S  C  T  K  N  D  F  E  I  F  F  L  I  P  L  S  L  F  S  F  V  L  E  Q  *  P  *  Y  G  *  S  G  K  D  S  K  E  *  G  *  I  *  H  G  Y  *  F  W  G  A  A  *  L  M  D  *  L  V  M  L  P  F  Y  L  F  I  V  Y  F  R  R  C  N  Y  A  W </first_frame>
            <second_frame>  K  I  *  S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : E  F  A  P  T  K  T  Q  K  V  S  Y  F  S  D  K  I  S  E  V  A  P  K  M  I  L  R  Y  F  S  *  F  L  C  L  C  F  H  L  C  W  N  N  D  P  D  M  D  R  V  E  K  I  Q  R  N  E  D  K  Y  N  T  A  T  N  F  G  E  Q  H  N  *  W  I  D  W  *  C  Y  H  S  I  Y  L  L  F  I  F  V  G  A  I  M  L   </second_frame>
            <third_frame>   K  F  D  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  N  S  H  Q  Q  K  L  K  K  F  L  I  S  R  T  K  F  Q  K  L  H  Q  K  *  F  *  D  I  F  L  N  S  F  V  F  V  F  I  C  V  G  T  M  T  L  I  W  I  E  W  K  R  F  K  G  M  R  I  N  I  T  R  L  L  I  L  G  S  S  I  I  D  G  L  I  G  D  V  T  I  L  F  I  Y  C  L  F  S  *  V  Q  L  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80037" stop="79991"/>
                    <exon start="79887" stop="79792"/>
                    <exon start="70600" stop="70471"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRIRTNKNSKSFLFLGQNFRSCTKNDFEIFFLIPLSLFSFVLEQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80594" stop="80337"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLILICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="71395" e_stop="71263"/>
            <exon e_start="71158" e_stop="71140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.000" e_score="0.947"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="71395" e_stop="71263" e_length="133"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71262" i_stop="71159" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="71158" e_stop="71140" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71395" stop="71263"/>
              <exon start="71158" stop="71140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331158" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAG : GAGACTGCAGCAGTCTGCA</gDNA_template>
            <first_frame> R  R  S  E  *  V  I  Q  V  I  H  F  T  K  A  *  S  S  L  P  Q  M  S  L  Q  E  W  Q  Q  *  I  T  N  I  M  T  V  H  D  A  P  L  T  P   : G  D  C  S  S  L   </first_frame>
            <second_frame>  E  D  R  N  K  S  F  R  S  F  I  L  Q  K  H  E  V  L  C  H  K  *  V  F  K  N  G  S  S  K  *  Q  I  L  *  L  F  M  M  R  R  S  R  Q  :  E  T  A  A  V  C  </second_frame>
            <third_frame>   K  I  G  I  S  H  S  G  H  S  F  Y  K  S  M  K  F  F  A  T  N  E  S  S  R  M  A  A  V  N  N  K  Y  Y  D  C  S  *  C  A  A  H  A  R :   R  L  Q  Q  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="72051" e_stop="71471"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72051" e_stop="71471" e_length="581"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72051" stop="71471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302982" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCT</gDNA_template>
            <first_frame> D  N  E  F  S  V  S  A  S  S  S  Y  K  S  D  C  L  L  V  L  *  L  P  F  L  L  S  Y  F  W  K  A  *  I  R  I  *  L  L  K  Y  P  P  H  L  L  L  S  H  S  L  L  H  F  S  D  I  P  V  N  Y  E  I  R  K  K  R  C  R  T  Q  S  C  K  V  T  L  E  L  R  S  C  S  Q  R  N  *  P  E  S  A  L  S  G  V  R  F  D  L  H  G  L  F  C  G  E  V  L  L  K  S  K  I  L  S  P  D  S  S  V  R  S  K  V  L  H  G  L  F  P  H  A  A  K  R  D  L  D  F  M  L  V  L  K  R  I  *  V  L  *  G  K  L  M  L  G  M  F  I  V  Q  V  L  L  H  S  I  M  M  E  M  I  C  H  I  Y  I  L  M  V  K  K  T  L  K  I  I  *  H  S  S  Y  A   </first_frame>
            <second_frame>  I  T  N  S  V  F  Q  L  A  P  V  T  N  Q  T  A  Y  *  F  Y  D  F  L  F  S  *  A  T  F  G  K  P  R  *  E  Y  S  C  *  S  I  L  L  I  C  C  Y  P  I  P  C  S  T  F  Q  I  Y  L  *  I  M  R  S  G  K  R  G  A  G  P  R  V  A  K  *  H  L  N  F  V  P  A  A  K  E  I  D  R  R  V  H  C  Q  E  L  D  S  I  F  T  D  Y  S  V  G  K  Y  F  *  K  A  R  S  *  V  Q  I  P  L  S  D  Q  K  Y  F  T  D  C  F  H  M  L  Q  K  E  I  S  I  L  C  L  F  *  R  G  Y  E  Y  Y  R  G  S  *  C  L  G  C  L  *  F  R  S  F  C  I  L  L  *  W  R  *  F  V  T  Y  T  F  S  W  *  R  K  P  *  K  L  F  D  T  R  A  M  L  </second_frame>
            <third_frame>   *  R  I  Q  C  F  S  *  L  Q  L  Q  I  R  L  P  I  S  S  M  T  S  F  S  L  E  L  L  L  E  S  L  D  K  N  I  V  V  E  V  S  S  S  S  V  A  I  P  F  P  A  P  L  F  R  Y  T  C  E  L  *  D  Q  E  K  E  V  Q  D  P  E  L  Q  S  D  T  *  T  S  F  L  Q  P  K  K  L  T  G  E  C  T  V  R  S  *  I  R  S  S  R  I  I  L  W  G  S  T  S  E  K  Q  D  P  E  S  R  F  L  C  Q  I  K  S  T  S  R  I  V  S  T  C  C  K  K  R  S  R  F  Y  A  C  S  K  E  D  M  S  I  I  G  E  V  D  A  W  D  V  Y  S  S  G  P  S  A  F  Y  Y  D  G  D  D  L  S  H  I  H  S  H  G  E  E  N  L  K  N  Y  L  T  L  E  L  C  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71764" stop="71471"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSSRIILWGSTSEKQDPESRFLCQIKSTSRIVSTCCKKRSRFYACSKEDMSIIGEVDAWDVYSSGPSAFYYDGDDLSHIHSHGEENLKNYLTLELCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 403 chains have been computed
$ 
$ memory statistics:
$ 1103592 bytes spliced alignments in total
$ 309 spliced alignments have been stored
$ 3571 bytes was the average size of a spliced alignment
$ 43272 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 2884 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 473 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:09:47
-->
