<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:15:36"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604302" ref_strand="+" ref_description="SGN-U604302 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359037|emb|CAO66939.1| (e_value=2e-71) unnamed; (*ATH) AT4G18260.1 (e_value=2e-59) | Symbol: None | cytochrome B561-related, related to cytochrome b-561 (GI:20345443) (Mus musculus); multidrug resistance protein, Homo sapiens, PIR2:S71841 | chr4:10093535-10097514 REVERSE | Aliases: T9A21.110, T9A21_110; ">
      <seq>gcacgaggcaacatgttcctaaggtgaatcctcataggatatttgatattgaaattcatggaatattattatgggcttcaatgggattcttgatgccagctggaatactcacaataagactctccaatacagaagagtgtagcacaacaaaactcaaaattctcttctatgttcatggaactcttcaggtactctctgtggtgttggctactgctggagctgtgctatcaataaagagctttgaaaatttgttcaacaatactcaccaaagaataggcttagcactttatattgccgtctatgtccaattttttatgggatttcgaaggcctatgaggggaagtaaaggaagaagtgtgtggtactttttccattggctacttggaacaacaatatgtttggcaggaattatcaacacttacacaggcttaaatgcttacaatcaaagaacatcaaagccaataagcctttggacaataatttttacagctcaaatatcattcatgggattattctatcttttccaagacaaatgggaatatatacaaaagcaaggggtcattcttaacaacaatgaaactacaacacctcaagtggaaatagttgttcctcaaaatgatgaacaaaagatgataatgagaactgagtcaggaaggaaaagcaatgcacttggtactttcttttctagacataatgtcctaaacaaattatttcaacaaacttgaaatgttttcatgtttcttgtaaattactagtttctcgatacgcatgtgtattttgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="733" stop="3988"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1033" g_stop="1055" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="0.826"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1056" i_stop="1363" i_length="308">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1364" g_stop="1528" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="188" r_length="165" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1529" i_stop="2094" i_length="566">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2095" g_stop="2243" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="337" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2244" i_stop="3241" i_length="998">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3242" g_stop="3688" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="784" r_length="447" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U604302" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>784</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1033" e_stop="1055"/>
          <exon e_start="1364" e_stop="1528"/>
          <exon e_start="2095" e_stop="2243"/>
          <exon e_start="3242" e_stop="3688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCAACCAACATGTTCCTAAGGTATGACCCCCCCCACCCCACCCCACCCCCCTACAAAATTGTTGTGTTTATGGAAGCACATTCAGAATTTAAATTTGATCTGTCGGGTTCATCCGAACCTAGGTTAAAATAATTTTTTATGTATATATAGCAGATGTCGAACTCCCTTCGATTTCTTCGTGTGTCTATTTTTCAGATTTTGAACCTCTTGTCAAAAATTCTGGCTCTGCTCCATAACATAGGAAGACATTTGCTTTCCCTTATTTAATTCGGTTTTTTTTTCCAAACAAGGGATGAGAATTTGACAACTAATGTTAAGTATTGTATAGGTGAATTCTCATAGGATATTTGATATTGAAATTCATGGAATATTATTATGGGCTTCAATGGGATTCTTGATGCCAGCTGGAATACTCACAATAAGATTCTCCAATACAGAAGAGTGTAGCACAACAAAACTCAAAATTCTCTTCTATGTTCATGGAACTCTTCAGGTAACTAACACTGTGTTTTTCTGGTTTCGATTTGATACGGAGTTTAAAAAAATAAAAAAAAATGTAACAAAATCTCCTTTGATACTGTGGTCTAATCTTTAAACACATGACACGTGTCACAAAAGAAAAGAGACATTCTTTTTTAAATAAACTAAAAAAGAAAAATAAAAGAAACAAACTGAAAAAGAAACAGAATGAAGATTTAGTTTCAAATTTTGAAAATGAATTTAAATTTTTAGTAAAGGGAAAAAAAAACTTTTTTGATATCTCCTTGATGAATGATAAATGTTTCTTTTGAGCCATGACAAGTAATGATCATAAATTGATCTTTACTTTAGGTGCACTTTTAATCATAGTAATGTTAAAAAAAGTTCAAAATTCATTTATGTGAGCCCACAGTTTGGTGGGAGTATAAGTAAAAACAGATTTGACTATGATTGTGTCCATTAATATGAGGATTTATTTAACTAATACTAGAAATTAAAAAAAAAAATTATGTTATTTCTTTTGTTTCTGGCTGTAATAATTGATCCTATTTTATTTTCTTTCTATTTTTATTTGTAAAGGTACTCTCTGTGGTGTTGGCTACTGCTGGAGCTGTGCTATCAATAAAGAGCTTTGAAAATTTGTTCAACAATACTCACCAAAGAATAGGCTTAGCACTTTATATTGCCGTCTATGTCCAATTTTTTATGGGATTTCGAAGGCCTATGAGGTAACTTGTCCTTTATTTTTTAAGCAATTACTTCATTCGTCCACTTTTATTTGTTATGAAAGTTAATTTGATTAATTTTCAAAGTTAAATTAGATTATATTAATTTGATATTTTAAACAAAAAATTTAGTTATTCAAAAATTATATGAAAAGTAGTACACCATATAAATTATTTGTATATCAATATGATGAAAAAATCAACCTTAAAATGTTAGACAAAGTTTTTATAGTTTGACTCTAAAAATAGAAACTATGACAATTAATAGTGGATGAAGAGAGTAATAATAGATATAGTGAAACTTTGCCTAGGTTGAATTGTAAAAAGAAAAAATCTTTTTGGCTAGAAAATTTGGCCAGAATTTAACCAGAATGGTATTTTACCTATGTTATTTTATCTTTTTGAATATTTTTACCATTTTAACTTTAATTACTTTAAATTAAAAAAATATTTAAAAAATTAATTTATTTTAAAATAAAAAGATATTATACGCTTTTAAAATTTTCTAACCAAATTTTGAGGTCACCCTTATAAAATATATGTAGGAAAAGCAGCACCTTGGCTTTCTAAAAGAAAATTGAATCCCGCGTACACGGGTCTTGAGATTTGTATTTTTGATACAGTCGTCTAAAATTAAGTATTAAGTAGCTTTACTCATACCCACTTGTTATTTTTGATTAATTCAAGTATTAAGTAGCTTTATTTTATTAGAATTTGAGCACTGATCTTTTTAACGATTTTCACCAATTTCATTCACACTATACTACACCTTTGAGCCTTTTGTACACGCACTTATAACTACAAGCATGATGTCAATATGAGTAATGCACATCTAGAGGCTTCTCTAGAATTATGTGTACATATATCAAAAACATGCATATAACTAAATCAAACTCGTTCTGAATCAACTTACTCTAAATTTTGGATTCATCTCGACTTAAACATATCTCTATGAAATTTAATTAAAGACTAACTTATTATTTAACTCTTTTGGACTATAGGGGAAGTAAAGGAAGAAGTGTGTGGTACTTTTTCCATTGGCTACTTGGAACAACAATATGTTTGGCAGGAATTATCAACACTTACACAGGCTTAAATGCTTACAATCAAAGAACATCAAAGCCAATAAGCCTTTGGACAATAATTTTTACAGCTCAAATATCATTCATGGGATTATTCTATCTTTTCCAAGACAAATGGGAATATATACAAAAGCAAGGGGTCATTCTTAACAACAATGAAACTACAACACCTCAAGTGGAAATAGTTGTTCCTCAAAATGATGAACAAAAGATGATAATGAGAACTGAGTCAGGAAGGAAAAGCAATGCACTTGGTACTTTCTTTTCTAGACATAATGTCCTAAACAAATTATTTCAACAAACTTGAAATGTTTTCATGTTTCTTGTAAATTACTAGTTTCTCGATACGCATGTGTATTTTGTATG</genome_strand>
        <mrna_strand>GCACGAGGCAACATGTTCCTAAG....................................................................................................................................................................................................................................................................................................................GTGAATCCTCATAGGATATTTGATATTGAAATTCATGGAATATTATTATGGGCTTCAATGGGATTCTTGATGCCAGCTGGAATACTCACAATAAGACTCTCCAATACAGAAGAGTGTAGCACAACAAAACTCAAAATTCTCTTCTATGTTCATGGAACTCTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCTCTGTGGTGTTGGCTACTGCTGGAGCTGTGCTATCAATAAAGAGCTTTGAAAATTTGTTCAACAATACTCACCAAAGAATAGGCTTAGCACTTTATATTGCCGTCTATGTCCAATTTTTTATGGGATTTCGAAGGCCTATGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAAGTAAAGGAAGAAGTGTGTGGTACTTTTTCCATTGGCTACTTGGAACAACAATATGTTTGGCAGGAATTATCAACACTTACACAGGCTTAAATGCTTACAATCAAAGAACATCAAAGCCAATAAGCCTTTGGACAATAATTTTTACAGCTCAAATATCATTCATGGGATTATTCTATCTTTTCCAAGACAAATGGGAATATATACAAAAGCAAGGGGTCATTCTTAACAACAATGAAACTACAACACCTCAAGTGGAAATAGTTGTTCCTCAAAATGATGAACAAAAGATGATAATGAGAACTGAGTCAGGAAGGAAAAGCAATGCACTTGGTACTTTCTTTTCTAGACATAATGTCCTAAACAAATTATTTCAACAAACTTGAAATGTTTTCATGTTTCTTGTAAATTACTAGTTTCTCGATACGCATGTGTATTTTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587809" ref_strand="+" ref_description="SGN-U587809 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|13161908|emb|CAC33001.1| (e_value=1e-70) urease accessory protein G [Solanum tuberosum]; (*ATH) AT2G34470.2 (e_value=1e-67)  Symbol: None | similar to urease accessory protein G [Solanum tuberosum] (GB:CAC33002.1); similar to urease accessory protein G [Solanum tuberosum] (GB:CAC33000.1); contains InterPro domain Urease accessory protein UreG (InterPro:IPR004400); contain... ; (*SWP) sp|Q9HUS0|UREG_PSEAE (e_value=5e-26) Urease accessory protein ureG OS=Pseudomonas aeruginosa GN=ureG; ">
      <seq>ttttatctcccctgtacccttgagataccctctttgactctgagaatctccactcaaatggcttcttcagaccaccatatgcatgaccaccaccatcatgaccatgaccatgaccatgaccatacccatcaggacacaaaagcaacatcatgggtaggagcagatgggaaagtataccatagtcatgatgggttggctcctcactctcatgaacctatttattcacctggctactttagcagaagggcacctccacttaatgacaggaatttcagtgaaagagcctttactattggaattggtggccctgttggtactgggaaaacagctttaatgctggcattatgtaaagtcttgagggaaaaatacagtcttgcagcagtaacaaatgatatattcacgaaagaagatggagagttcttaataaaacatggtgcattgccggaggaaaggattcgagcagtggagacaggaggatgcccacatgctgctattagggaagatataagcattaaccttggacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="6382" stop="8633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6682" g_stop="6807" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.865"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6808" i_stop="6891" i_length="84">
            <donor d_prob="0.996" d_score="0.74"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6892" g_stop="7080" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="320" r_length="189" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7081" i_stop="7583" i_length="503">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7584" g_stop="7644" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="381" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7645" i_stop="8187" i_length="543">
            <donor d_prob="0.939" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8188" g_stop="8333" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="527" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U587809" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6682" e_stop="6807"/>
          <exon e_start="6892" e_stop="7080"/>
          <exon e_start="7584" e_stop="7644"/>
          <exon e_start="8188" e_stop="8333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATCTCCCCTGTACCCTTGAGATACCCTCTGTGA--CTGAGAATCTCCACTCAAATGGCTTCTTCAGACCACCATATGAATGACCACCACCACCAT---CATCATCATGACCATGACCATAACCATGAGTACAAACTTGCTCTGTCATTTTTTTAAATTTTTTGTTTTTGGGTTGATTCTTGATTAATTAGTTGACTTACTTTATGAATCAGGGACACAAAAGCGACATCATGGGTAGGAGCAGATGGGAAAGTATACCATAGTCATGATGGGTTGGCTCCTCACTCTCATGAACCTATTTATTCACCTGGCTACTTTAGCAGAAGGGCACCTCCACTTAATGACAGGAATTTCAGTGAAAGAGCCTTTACTATTGGAATTGGTGGCCCTGTTGGTACTGGGTATTTCTTCTTTTCCCTCAATTTTTCTTAAATTTATGTCTTGGGATGTGTGTTCAAGTGAAAGGGTTTTCAGTATTTGAGAAGAAAAATTCAATCTTTGAGAAATGAAAGTAGAAGGGGGAGGATGATATTTAGTAGCTTTTGGTATCTGTTGTAAGTAGGATTTTCTTTTAGCTGCAGCAACCCAAGTAAGAAACAAAAGGGACCATTTTTATTGATAAAAAAATTGAATCTTTAGAACTCTGCATATAGGAACACAATTGTTCCATTAGACACATATCTGACTGTGTGAATGTGTGTATGAGTGTGCTAGAGCATTTTCCTTTTCAGTTCAAGGTTCATAATGTACTGGAGTGACTTCACAGGGTATGTTATTGTTTTTGTAGTATTAGTGTTTGCTTTTGCTTTTCCTCCAATCGCAGTTTCTTTCTTGTTTATTAGCTTGTAAAATTTTGGTTGAACATGTTGAGATTTTGAGGGACTAACTGTTCTTTTATATGCAGGAAAACAGCTCTAATGCTGGCATTATGTAAAATCTTGAGGGAAAAATACAGTCTTGCAGCAGTATGTACCACCAAATGATTTCTTTCTTTTGCCATTGTGACATACTTACTTCATGAATAAGTTTAGTCTGCACAATTTTTTGGAACTGGTGGATTCACTTTTGTGGTTTGGAAAATGGAACTCAAGTTTATTGGTGGTTTTCATATCTTTCTCTGCCTCATCATTTGAAATTCTAGATGAAGATGGGTGTTACATGCAATTTTCCGTTTGATTGAGTCATTTCAAGTGGAATAACAACATTCTTTATACACAATTGCCTTTGGAGATTATCTCAATAGGTCATGTTCTTGTTTTTTAATCATTAAGGACTCCTTCCTAAACATCACATATTGGCATCTGCCAAAACTTCAAACCGAGGTTTTGGGAGTTTACTTGACGTTTGTTAGTTTGACAGGAAATACGTTATGTGCAAGCATGTATTTGGTGTTCTGGAATTCCGACGCTCTTTCATCACTTTCCAAGTCTATGATCTTGAAATCTTCACGTTTTTGTTCTAAGATGTAGAATGAATTAATGTCCATGTTAAGATGCATTTCTTTGTAGGTAACAAATGATATATTCACGAAAGAAGATGGAGAGTTCTTAATAAAACATGGTGCATTGCCGGAGGAAAGGATTCGAGCAGTGGAGACAGGAGGATGCCCACATGCTGCTATTAGGGAAGATATAAGCATTAACCTTGGACCTCT</genome_strand>
        <mrna_strand>TTTTATCTCCCCTGTACCCTTGAGATACCCTCTTTGACTCTGAGAATCTCCACTCAAATGGCTTCTTCAGACCACCATATGCATGACCACCACCATCATGACCATGACCATGACCATGACCATACCCATCA....................................................................................GGACACAAAAGCAACATCATGGGTAGGAGCAGATGGGAAAGTATACCATAGTCATGATGGGTTGGCTCCTCACTCTCATGAACCTATTTATTCACCTGGCTACTTTAGCAGAAGGGCACCTCCACTTAATGACAGGAATTTCAGTGAAAGAGCCTTTACTATTGGAATTGGTGGCCCTGTTGGTACTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAGCTTTAATGCTGGCATTATGTAAAGTCTTGAGGGAAAAATACAGTCTTGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAATGATATATTCACGAAAGAAGATGGAGAGTTCTTAATAAAACATGGTGCATTGCCGGAGGAAAGGATTCGAGCAGTGGAGACAGGAGGATGCCCACATGCTGCTATTAGGGAAGATATAAGCATTAACCTTGGACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567848" ref_strand="+" ref_description="SGN-U567848 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|13161908|emb|CAC33001.1| (e_value=1e-141) urease accessory protein G [Solanum tuberosum]; (*ATH) AT2G34470.2 (e_value=9e-133)  Symbol: None | similar to urease accessory protein G [Solanum tuberosum] (GB:CAC33002.1); similar to urease accessory protein G [Solanum tuberosum] (GB:CAC33000.1); contains InterPro domain Urease accessory protein UreG (InterPro:IPR004400); contain... ; (*SWP) sp|Q9HUS0|UREG_PSEAE (e_value=2e-62) Urease accessory protein ureG OS=Pseudomonas aeruginosa GN=ureG; ">
      <seq>ccctgtacccttgagataccctctgtgactgagaatctccactcaaatggcttcttcagaccaccatatgaatgaccaccaccaccatcatcatcatgaccatgaccataaccatgaggacacaaaagcgacatcatgggtaggagcagatgggaaagtataccatagtcatgatgggttggctcctcactctcatgaacctatttattcacctggctactttagcagaagggcacctccacttaatgacaggaatttcagtgaaagagcctttactattggaattggtggccctgttggtactgggaaaacagctctaatgctggcattatgtaaaatcttgagggaaaaatacagtcttgcagcagtaacaaatgatatattcacgaaagaagatggagagttcttaataaaacatggtgcattgccggaggaaaggattcgagcagtggagacaggaggatgcccacatgctgctattagggaagatataagcattaaccttggacctcttgaggagctttctaatttgtacaaagcagatatactactctgtgaatctggtggagacaacctagctgccaacttcagtagggaacttgctgactacataatctacataatagatgtatctgcgggtgacaaaattcctcgaaaaggaggtcccggaattacacaagcagatctccttgtgataaataagaccgacttggcaccagctgtgggagcagatttgtccgtcatggagcgtgatgcacttcagatgcgggatggtggcccttttgtttttgctcaggtgaagcatggggttggcgtagaggacatagtgaaccatatcttacaatcctgggaagttgcaacaggcaataagaagcgctaattgaaaacttcacttgaacattgtggatcttttggcttatccagtgctattatataacattcaatttccctgtttctggactaatataatctgtctactgaataatgcttgttatgtacaagcacctagtatttataagttcctatatttaatttggtttgtttgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="6391" stop="10639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6691" g_stop="6807" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6808" i_stop="6891" i_length="84">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6892" g_stop="7080" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="306" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7081" i_stop="7583" i_length="503">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7584" g_stop="7644" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="367" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7645" i_stop="8187" i_length="543">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8188" g_stop="8389" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="569" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8390" i_stop="8537" i_length="148">
            <donor d_prob="0.460" d_score="1.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8538" g_stop="8659" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="691" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8660" i_stop="8763" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8764" g_stop="8868" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="796" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8869" i_stop="10087" i_length="1219">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10088" g_stop="10339" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="1048" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U567848" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1048</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6691" e_stop="6807"/>
          <exon e_start="6892" e_stop="7080"/>
          <exon e_start="7584" e_stop="7644"/>
          <exon e_start="8188" e_stop="8389"/>
          <exon e_start="8538" e_stop="8659"/>
          <exon e_start="8764" e_stop="8868"/>
          <exon e_start="10088" e_stop="10339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTGTACCCTTGAGATACCCTCTGTGACTGAGAATCTCCACTCAAATGGCTTCTTCAGACCACCATATGAATGACCACCACCACCATCATCATCATGACCATGACCATAACCATGAGTACAAACTTGCTCTGTCATTTTTTTAAATTTTTTGTTTTTGGGTTGATTCTTGATTAATTAGTTGACTTACTTTATGAATCAGGGACACAAAAGCGACATCATGGGTAGGAGCAGATGGGAAAGTATACCATAGTCATGATGGGTTGGCTCCTCACTCTCATGAACCTATTTATTCACCTGGCTACTTTAGCAGAAGGGCACCTCCACTTAATGACAGGAATTTCAGTGAAAGAGCCTTTACTATTGGAATTGGTGGCCCTGTTGGTACTGGGTATTTCTTCTTTTCCCTCAATTTTTCTTAAATTTATGTCTTGGGATGTGTGTTCAAGTGAAAGGGTTTTCAGTATTTGAGAAGAAAAATTCAATCTTTGAGAAATGAAAGTAGAAGGGGGAGGATGATATTTAGTAGCTTTTGGTATCTGTTGTAAGTAGGATTTTCTTTTAGCTGCAGCAACCCAAGTAAGAAACAAAAGGGACCATTTTTATTGATAAAAAAATTGAATCTTTAGAACTCTGCATATAGGAACACAATTGTTCCATTAGACACATATCTGACTGTGTGAATGTGTGTATGAGTGTGCTAGAGCATTTTCCTTTTCAGTTCAAGGTTCATAATGTACTGGAGTGACTTCACAGGGTATGTTATTGTTTTTGTAGTATTAGTGTTTGCTTTTGCTTTTCCTCCAATCGCAGTTTCTTTCTTGTTTATTAGCTTGTAAAATTTTGGTTGAACATGTTGAGATTTTGAGGGACTAACTGTTCTTTTATATGCAGGAAAACAGCTCTAATGCTGGCATTATGTAAAATCTTGAGGGAAAAATACAGTCTTGCAGCAGTATGTACCACCAAATGATTTCTTTCTTTTGCCATTGTGACATACTTACTTCATGAATAAGTTTAGTCTGCACAATTTTTTGGAACTGGTGGATTCACTTTTGTGGTTTGGAAAATGGAACTCAAGTTTATTGGTGGTTTTCATATCTTTCTCTGCCTCATCATTTGAAATTCTAGATGAAGATGGGTGTTACATGCAATTTTCCGTTTGATTGAGTCATTTCAAGTGGAATAACAACATTCTTTATACACAATTGCCTTTGGAGATTATCTCAATAGGTCATGTTCTTGTTTTTTAATCATTAAGGACTCCTTCCTAAACATCACATATTGGCATCTGCCAAAACTTCAAACCGAGGTTTTGGGAGTTTACTTGACGTTTGTTAGTTTGACAGGAAATACGTTATGTGCAAGCATGTATTTGGTGTTCTGGAATTCCGACGCTCTTTCATCACTTTCCAAGTCTATGATCTTGAAATCTTCACGTTTTTGTTCTAAGATGTAGAATGAATTAATGTCCATGTTAAGATGCATTTCTTTGTAGGTAACAAATGATATATTCACGAAAGAAGATGGAGAGTTCTTAATAAAACATGGTGCATTGCCGGAGGAAAGGATTCGAGCAGTGGAGACAGGAGGATGCCCACATGCTGCTATTAGGGAAGATATAAGCATTAACCTTGGACCTCTTGAGGAGCTTTCTAATTTGTACAAAGCAGATATACTACTCTGTGAATCTGGTGGAGGTAATTGGTCACAGAAACTGTTTGCAGACACAAACTAATAAGGATATTAAAGTTTATATTTTCAGTAAGATAATGACTGTCTTACATCACTGTATGATCAGATATTAACCCGTTTCAATTTTGGTTTAAGAAAAGTTCCTTATTGCAGACAACCTAGCTGCCAACTTCAGTAGGGAACTTGCTGACTACATAATCTACATAATAGATGTATCTGCGGGTGACAAAATTCCTCGAAAAGGAGGTCCCGGAATTACACAAGCAGATCTCCTTGTATGTTTCTTATTTTGCACATTTTGACTTCCAAAATATATCAAGTGTAAACTTATGTCTGCACATGATCAAATTATTATATGATTGTTCATTCTTAAATTTAGGTGATAAATAAGACCGACTTGGCACCAGCTGTGGGGGCAGATTTGTCCGTCATGGAGCGTGATGCACTTCAGATGCGGGATGGTGGCCCTTTTGTTTTTGCTCAGGTTCAGTAATTTTCTCTTCTCTATTCATTTTTATTTTTTTATAATTTTATTAGTATGACTCTGAATCAAACACCACTGTTCAAGCTTTACCTATTTGAAAGATCAGCTTGTAACTCTCCAGTATTTGAAGAGTTAAACAATGATGTGCATATACGAAATGTCATTTGTGTGTTTGTGAATTCTTGAAATGTAAAAAGTTTTTCCAAAAATAACTCCCTTTGTTCTACCTTCTGTCTGTGTATAGCTTGTCCGGGAAACATTAACCGTTTTTCCATAAACAAATAGGCTTTCTATCTCCAAAAAGTCAAAATCAACTTGTAGTAGTATCATTTGCATTGTTTACATTTTATTCGACTTCTTTTCATATTAAATATAAACTTAAGCGCATCAATACATTTGAAACTGATCCTGAATTTACATGCTATTCAAATCTATGTTGCTCGGACTCTTCCAAAATATCAACGGGTGCTTGTCGGATTCTCTAAAAGTAGTGTACTTTAGGAGAATCCAACATGGGTGCGGCATCGACTGTGAAGAGTCTGTGCAACTTAGATTCAAATAGCTTGGTCACTGTGATGATTTGAGAGAATAAATAGTAATGGAAGTGTAAAAAGTCGTATTGTCTCTGTGTTTGCAATATGAATCTTCACCCTGGCTATGTAGAATACCATGTTACATTTGCTTTCCTATATTGTGACTACACAATGACACGAAGGCAACAGTGAAAGAAATAGCTTCCATGTCCGACATACATACATCTTTTGTTCTCTTTCAATTTCTCTCGATTCTTTGGAGCATTTCCCGCGTCTTCTATTTGAAGTTGTTTGATGAAAGTGGAGAAGCTTCTGAATCTTTGTTTATAAAGACGCGGTCAAATATGCATGCTTTTAGTGACCAAATAATACAAATATTCTAGTTCAGATATATTTCTTTGATAACATACCTTGATACATGAACTTCTTGACTGAAAAGGAAAAGTTGAGAGGGGTGCATCAGAAGATTTGCCTGTTATTAAGAACTAGTACTAGAGAAAAGAATGAGATTTCATTTGTGAGACCGGAACTTTCTTGTGCAAATGTGCGATTTAAAAGCAAGCACGTTACAATATTGGAAGCTGGTTTGTTTGTTGAAACTATAAATTGCACCACAGGAAAATGTCACAGGGTGATTTTCATCTATTGATTCCTAACGCGATATGAGTGTGTTGATTCAACTGCAGGTGAAGCATGGGGTTGGCGTAGAGGACATAGTGAACCATATCTTACAATCCTGGGAAGTTGCAACAGGCAATAAGAAGCGCTAATTGAAAACTTCACTTGAACATTGTGGATCTTTTGGCTTATCCAGTGCTATTATATAACATTCAATTTCCCTGTTTCTGGACTAATATAATCTGTCTACTGAATAATGCTTGTTATGTACAAGCACCTAGTATTTATAAGTTCCTATATTTAATTTGGTTTGTTTGATC</genome_strand>
        <mrna_strand>CCCTGTACCCTTGAGATACCCTCTGTGACTGAGAATCTCCACTCAAATGGCTTCTTCAGACCACCATATGAATGACCACCACCACCATCATCATCATGACCATGACCATAACCATGA....................................................................................GGACACAAAAGCGACATCATGGGTAGGAGCAGATGGGAAAGTATACCATAGTCATGATGGGTTGGCTCCTCACTCTCATGAACCTATTTATTCACCTGGCTACTTTAGCAGAAGGGCACCTCCACTTAATGACAGGAATTTCAGTGAAAGAGCCTTTACTATTGGAATTGGTGGCCCTGTTGGTACTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAGCTCTAATGCTGGCATTATGTAAAATCTTGAGGGAAAAATACAGTCTTGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAATGATATATTCACGAAAGAAGATGGAGAGTTCTTAATAAAACATGGTGCATTGCCGGAGGAAAGGATTCGAGCAGTGGAGACAGGAGGATGCCCACATGCTGCTATTAGGGAAGATATAAGCATTAACCTTGGACCTCTTGAGGAGCTTTCTAATTTGTACAAAGCAGATATACTACTCTGTGAATCTGGTGGAG....................................................................................................................................................ACAACCTAGCTGCCAACTTCAGTAGGGAACTTGCTGACTACATAATCTACATAATAGATGTATCTGCGGGTGACAAAATTCCTCGAAAAGGAGGTCCCGGAATTACACAAGCAGATCTCCTT........................................................................................................GTGATAAATAAGACCGACTTGGCACCAGCTGTGGGAGCAGATTTGTCCGTCATGGAGCGTGATGCACTTCAGATGCGGGATGGTGGCCCTTTTGTTTTTGCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGCATGGGGTTGGCGTAGAGGACATAGTGAACCATATCTTACAATCCTGGGAAGTTGCAACAGGCAATAAGAAGCGCTAATTGAAAACTTCACTTGAACATTGTGGATCTTTTGGCTTATCCAGTGCTATTATATAACATTCAATTTCCCTGTTTCTGGACTAATATAATCTGTCTACTGAATAATGCTTGTTATGTACAAGCACCTAGTATTTATAAGTTCCTATATTTAATTTGGTTTGTTTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574056" ref_strand="+" ref_description="SGN-U574056 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|147811196|emb|CAN70159.1| (e_value=5e-82) hypothetical; (*ATH) AT4G18260.1 (e_value=3e-79) | Symbol: None | cytochrome B561-related, related to cytochrome b-561 (GI:20345443) (Mus musculus); multidrug resistance protein, Homo sapiens, PIR2:S71841 | chr4:10093535-10097514 REVERSE | Aliases: T9A21.110, T9A21_110; (*SWP) sp|Q5ZIH9|CC019_CHICK (e_value=6e-11) Uncharacterized protein C3orf19 homolog OS=Gallus gallus GN=RCJMB04_26a16; ">
      <seq>gctcaattctaaccctaaacccaaacgacagtgagaagaagcaaaggaacaactcgaaccatcaaaaaccaatagcaatcaatcaatcaatcaaacccaaaaaggtgtgcgtgtgtgggtgcagagcaagaaatcaatggcggaaggtggggagaagaagagggttgtcgtggagtcgttaggatggttaacggaatccaccatcatgcccaaaaagatccgaccaattgaaggcgtcggtgcttcttccatccttgagcttaaagcccaattatacaaatctcaagaagaggccaaacgcgtcgccaaagagaccgtccacccttctgctgctgacccgaattattcccatctagagatccatcgtgcaaagaggaagataactgccaagaacgtcttttcgtctaaaaatcatggggttgatgccagagaggccaaggacaagcttgagatgaaagcaatcaaggatggttcagtaagctatgctgccttagaacgaaaggctaagttatatgataagctggtgaggggtgagctttctgatggggaggaggaagagaagtactgtgttgacttctttcggaagggccaggagcaggaagactctgaacagcttcaacggcatgacatttctaacacagaaccaagagatgaagatggagatgatgatgcctccctactatcagacacaaaagctgcaggacttggccaagctggcacatttgaccgaagtgaacacaagcgtttcgttatggaagttcataaagaagcaagtcaagcaagggaaaaagcatcagaactcaagctacgtaggcaagaacaagtagcaacacgtcgagaaaaactaaagcaggcttatctccgcaagcagattgagaaattgaaagcttcctagacagaacagaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="12502" stop="15495"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12801" g_stop="13238" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13239" i_stop="14071" i_length="833">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14072" g_stop="14386" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="753" r_length="315" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14387" i_stop="15041" i_length="655">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15042" g_stop="15195" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="907" r_length="154" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U574056" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>907</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12801" e_stop="13238"/>
          <exon e_start="14072" e_stop="14386"/>
          <exon e_start="15042" e_stop="15195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAATTCTAACCCTAAACCCAAACGACAGTGAGAAGAAGCAAAGGAACAACTCGAACCATCAAAAACCAATAGCAATCAATCAATCAATCAAACCCAAAAAGGTGTGCGTGTGTGGGTGCAGAGCAAGAAATCAATGGCGGAAGGTGGGGAGAAGAAGAGGGTTGTCGTGGAGTCGTTAGGATGGTTAACGGAATCCACCATCATGCCCAAAAAGATCCGACCAATTGAAGGCGTCGGTGCTTCTTCCATCCTTGAGCTTAAAGCCCAATTATACAAATCTCAAGAAGAGGCCAAACGCGTCGCCAAAGAGACCGTCCACCCTTCTGCTGCTGACCCGAATTATTCCCATCTAGAGATCCATCGTGCAAAGAGGAAGATAACTGCCAAGAACGTCTTTTCGTCTAAAAATCATGGGGTTGATGCCAGAGAGGCCAAGTATACTTTCTGCTTCCCTTGCCCTATTTTTACTTGTTAATTATAGTATTCGTTTTCAATTTTTCATGTTCAGCGTTCTGGGGTTTCATAATTGAGGTTAGAATCTAGTTTAATGATAGTTTGATACTATCAAAGAGTTAGAATTGATATTAAAGTATCTTAGATATTGCAGTTGTATATGTGATTAAGATTCTGGCTTTGATTGTAGGATTGGAATTGGGGAAGGATGGTGATTAGTAAGTCATATACTAGAATCTTATAGTTTGATGCAATTGTGGAAATTAGGGCAAATTTTGATTCTATGTTCTGATTGATTATATCAGGAGTTGAAGTTGGATTTTATCTTATTTTGGGATAATTTTCTGGAGTCCTGCACATGTTTATGCATTTGATATTCATTTTTGTTCAAGGCATATGTGTTAAGCAGTGGGTGGAGGACTGCTCTGGGCACATTGGTGTCTTATGAGGCCTGTGATCCAGAAAATCTCCAAGGCTATTGTCCGAACCACTAGAGTTATTGGTGCTCCAGCCCTTTAATGTAGAACTAAATCATGTTTGTATGTGCCAGCAGGCTCCCCGTTGCATATTGCTTTGTCTTTCCATATCAAGTTCCCTCCATACTTTGTATTCTTTTTCATCTTTTGGCATGAATGGTTGAGAGTGTTTAATTAAACCAGAGAAGACACAGCCTTGCAGGAAGAAGTTAGTTTTAATAGAGAAGCTGCAAGCCCGCAACCTTTAGGGATTTTAGGCATATGCCTGACTTTCTATGAGATGTGAATATTATGATTCCACAACAGTGTAATTCATGTCTGTTTTCTCCTTCATTTCAGGGACAAGCTTGAGATGAAAGCAATCAAGGATGGTTCAGTAAGCTATGCTGCCTTAGAACGAAAGGCTAAGTTATATGATAAGCTGGTGAGGGGTGAGCTTTCTGATGGGGAGGAGGGAGAGAAGTACTGTGTTGACTTCTTTCGGAAGGGCCAGGAGCAGGAAGACTCTGAACAGCTTCAACGGCATGACATTTCTAACACAGAACCAAGAGATGAAGATGGAGATGATGATGCCTCCCTACTATCAGACACAAAAGCTGCAGGACTTGGCCAAGCTGGCACATTTGACCGAAGTGAACACAAGCGTTTCGTTATGTATGTATTGCTATTTATACACTATTTTGAGCTTAAATGTTTGTATGCTCAGTTGAGTAGAAAAAAAAAATCTAGTTTCTGTGTTTTACACTACCTAAGATGTTTGCAAGACTTTGCAGTCACTCATAAAACTGTCTGATTCACTTTGTGCCTAACATTATTTGTTGCGAACACTTTCTGCTTATAGTATTTAATAGATTTAGGAAAATAGAACATCTACCCAATTGTGATGGAAGAATTATGAACCTATCAATGATCAGAATGGTACTTGCTTATGTGCGCAAACGCAGAAAGGCTCCTGTTAAAAATCAAATAAATTACAGGACACCGGATTTTAAGGATGGGAGTTTGGGTGCTAAAACATCCTAGGTATCTTAGGTTTGTTCTTAATTGTCAGGTTTAAGGAAACCCCTCTCCTCCTTCCTCTTCTTGTCTTTGTTTATTTTCCATTTTTCTTGGGTAGTTTGCTTGAGAAGTAACTTTCTACCCGAGCAAAGAATTTGATCCCTAAACATAAGTTACAAGTGCAGAAAATTGTCGTTTATTGTTTGCGAAGAAGTTCATTAATTGCTTATCAGTCTGTTTTCTCTTACTATATTTAATTTGTTCACAACCTTTATCTACTTACATTTGCATTCCATGTTGCTGTTCTCAGGGAAGTTCATAAAGAAGCAAGTCAAGCAAGGGAAAAAGCATCAGAACTCAAGCTACGTAGGCAAGAACAAGTAGCAGCACGTCGAGAAAAACTAAAGCAGGCTTATCTCCGCAAGCAGATTGAGAAATTGAAGGCTTCCAAGACAGAGCAGACA</genome_strand>
        <mrna_strand>GCTCAATTCTAACCCTAAACCCAAACGACAGTGAGAAGAAGCAAAGGAACAACTCGAACCATCAAAAACCAATAGCAATCAATCAATCAATCAAACCCAAAAAGGTGTGCGTGTGTGGGTGCAGAGCAAGAAATCAATGGCGGAAGGTGGGGAGAAGAAGAGGGTTGTCGTGGAGTCGTTAGGATGGTTAACGGAATCCACCATCATGCCCAAAAAGATCCGACCAATTGAAGGCGTCGGTGCTTCTTCCATCCTTGAGCTTAAAGCCCAATTATACAAATCTCAAGAAGAGGCCAAACGCGTCGCCAAAGAGACCGTCCACCCTTCTGCTGCTGACCCGAATTATTCCCATCTAGAGATCCATCGTGCAAAGAGGAAGATAACTGCCAAGAACGTCTTTTCGTCTAAAAATCATGGGGTTGATGCCAGAGAGGCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAGCTTGAGATGAAAGCAATCAAGGATGGTTCAGTAAGCTATGCTGCCTTAGAACGAAAGGCTAAGTTATATGATAAGCTGGTGAGGGGTGAGCTTTCTGATGGGGAGGAGGAAGAGAAGTACTGTGTTGACTTCTTTCGGAAGGGCCAGGAGCAGGAAGACTCTGAACAGCTTCAACGGCATGACATTTCTAACACAGAACCAAGAGATGAAGATGGAGATGATGATGCCTCCCTACTATCAGACACAAAAGCTGCAGGACTTGGCCAAGCTGGCACATTTGACCGAAGTGAACACAAGCGTTTCGTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTTCATAAAGAAGCAAGTCAAGCAAGGGAAAAAGCATCAGAACTCAAGCTACGTAGGCAAGAACAAGTAGCAACACGTCGAGAAAAACTAAAGCAGGCTTATCTCCGCAAGCAGATTGAGAAATTGAAAGCTTCCTAGACAGAACAGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563608" ref_strand="+" ref_description="SGN-U563608 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|116782780|gb|ABK22654.1| (e_value=8e-29) unknown; ">
      <seq>tagacccagaggaggtgtttttgatgttgcacctcctctctgaacaaacccgtgaaggatagcgaatccaagcatcagctttggcaacttaaagacgggatgcatctagcaccttgaatttctggacttccttagatgaaaccaagtcgttgctttatcaaggagtagagagctcaatcgttatagcaaatgctcctatgtaaaccctaattatgacgattttcgttattacacagttaagaggctaaattcaacagataattacactgtggatgagcaaaagaaggataagtaagtattaaagaatacgactccactggggatcgaacccagaatctctggtttcgtagaccagcgccttatccattgggccatggagtctttgttgctacattagtttaacttttaattattaattgtgccacattaatttaattccgttaattggaagaattactgtttttagtataaataaaagtatcatctatctaaatcaaacaactgatattttcaaattaaaattctattgcaaccggaaacttccagaagatgagtcggtgtaaatatataagttggaccaaagaaattacagcagctagcatttctgcaaaatcacttcaattttaacaattctccgaaatgcctgaatctcatttacgccggcggaggtcaccaccggaggagcggcttagggagatagaagttctcatatactcagcagaaggcctgaagaacgtgaaacacttgaccaggatgagaacctacgccgaggtctacgtggtgaaagacgtccacgtggcaaaaaccaaaatagcggagcacaccggcgacggagacgacgggaccaatccaatatggaaccaggtggtgaaggtgaaatttcacgaaaagctgccggaaaatgacatcatggcggcgttaaacgtggatatttacgctcacggacacattcgagagaaaccggtggggagcgctcgagttttgctctccgatgtgttgaaggatactaaatcgccggaatcggagatgctggagaataatccgatccagtttatgacagtgttagtttggagaccttctggtaggccacaaggtgtgctcaacctgtgggtcccacctacagggcggttcctggttccgttgacttcgttgtcgnttaacttgaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="15882" stop="17701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16184" g_stop="16386" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="218" r_length="204" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16387" i_stop="16451" i_length="65">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16452" g_stop="17401" g_length="950"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="1168" r_length="950" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U563608" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1153</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16184" e_stop="16386"/>
          <exon e_start="16452" e_stop="17401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTTTTGATGCTGCACTTCAT-TTTGAACAAACCCGTGAAGGATAGCGAATCCAAGCATCAGCTTTGGCAACTTAAAGACGGGATGCATCTAGCACCTTGAATTTCTGGACTTCCTTAGATGAAACCAAGTCGTTGCTTTATCAAGGAGTAGAGAGCTCAATCGTTATAGCAAATGCTCCTATGTAAACCCTAATTATGACGATTTCTCGTGTTCACTTTCATGTAAAAGCGATTACTTTGTATTCATGGTGGAAATGAAAATGAAGTTTTTCGTTATTACACAGTTAAGAGGCTAAATTCAACAGATAATTACACTGTGGATGAGCAAAAGAAGGATAAGTAAGTATTAAAGAATACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTTCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCTTTGTTGCTACATTAGTTTAACTTTTAATTATTAATTGTGCCACATTAATTTAATTCCGTTAATTGGAAGAATTACTGTGTTTAGTATAAATAAGAGTATCATCTATCTAAATCAAACAACTGATATTTTCAAATTAAAATTCTATTGCAACCGGAAACTTCCAGAAGATGAGTCGGTGTAAATATATAAGTTGGACCAAAGAAATTACAGCAGCTAGCATTTCTGCAAAATCACTTCAATTTTAACAATTCTCCGAAATGCCTGAATCTCATTTACGCCGGCGGAGGTCACCACCGGAGGAGCGGCTTAGGGAGATAGAAGTTCTCATATACTCAGCAGAAGGCCTGAAGAACGTGAAGCACTTGACCAGGATGAGAACCTACGCCGAGGTCTACGTGGTGAAAGACGTCCACGTGGCAAAAACCAAAATAGCGGAGCACACCGGCGACGGAGACGACGGGACCAATCCAATATGGAACCAGGTGGTGAAGGTGAAATTTCACGAAAAGCTGCCGGAAAATGACATCATGGCGGCGTTAAACGTGGATATTTACGCTCACGGACACATTCGAGAGAAACCGGTGGGGAGCGCTCGAGTTTTGCTCTCCGATGTGTTGAAGGATACTAAATCGCCGGAATCGGAGATGCTGGAGAATAATCCGATCCAGTTTATGACAGTGTTAGTTTGGAGACCTTCTGGTAGGCCACAAGGTGTGCTCAACCTGTGGGTCCCACCTACAGGGCGGTTCCTGGTTCCGTTGACTTCGTTGTCGTTTAGCTTGAGGG</genome_strand>
        <mrna_strand>GTGTTTTTGATGTTGCACCTCCTCTCTGAACAAACCCGTGAAGGATAGCGAATCCAAGCATCAGCTTTGGCAACTTAAAGACGGGATGCATCTAGCACCTTGAATTTCTGGACTTCCTTAGATGAAACCAAGTCGTTGCTTTATCAAGGAGTAGAGAGCTCAATCGTTATAGCAAATGCTCCTATGTAAACCCTAATTATGACG.................................................................ATTTTCGTTATTACACAGTTAAGAGGCTAAATTCAACAGATAATTACACTGTGGATGAGCAAAAGAAGGATAAGTAAGTATTAAAGAATACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTTCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCTTTGTTGCTACATTAGTTTAACTTTTAATTATTAATTGTGCCACATTAATTTAATTCCGTTAATTGGAAGAATTACTGTTTTTAGTATAAATAAAAGTATCATCTATCTAAATCAAACAACTGATATTTTCAAATTAAAATTCTATTGCAACCGGAAACTTCCAGAAGATGAGTCGGTGTAAATATATAAGTTGGACCAAAGAAATTACAGCAGCTAGCATTTCTGCAAAATCACTTCAATTTTAACAATTCTCCGAAATGCCTGAATCTCATTTACGCCGGCGGAGGTCACCACCGGAGGAGCGGCTTAGGGAGATAGAAGTTCTCATATACTCAGCAGAAGGCCTGAAGAACGTGAAACACTTGACCAGGATGAGAACCTACGCCGAGGTCTACGTGGTGAAAGACGTCCACGTGGCAAAAACCAAAATAGCGGAGCACACCGGCGACGGAGACGACGGGACCAATCCAATATGGAACCAGGTGGTGAAGGTGAAATTTCACGAAAAGCTGCCGGAAAATGACATCATGGCGGCGTTAAACGTGGATATTTACGCTCACGGACACATTCGAGAGAAACCGGTGGGGAGCGCTCGAGTTTTGCTCTCCGATGTGTTGAAGGATACTAAATCGCCGGAATCGGAGATGCTGGAGAATAATCCGATCCAGTTTATGACAGTGTTAGTTTGGAGACCTTCTGGTAGGCCACAAGGTGTGCTCAACCTGTGGGTCCCACCTACAGGGCGGTTCCTGGTTCCGTTGACTTCGTTGTCGNTTAACTTGAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601578" ref_strand="+" ref_description="SGN-U601578 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aggctaaaaacaaattacctcaatataatattattttattcctaattttgaatggatcgtcaattttaattaaaggataatgagctttgtcaaaattacaatttttaagtaacaaatacaaacaagtttattacattcaaatggtatccatgcacagctggaagagccttacacctcattgttactctccaccgccggctcatccaccgataccatcttatttttttcggcgtctctttccctcaagctaaactacaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="17940" stop="17142"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17640" g_stop="17380" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U601578" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>261</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17640" e_stop="17380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTAAAAACAAATTACCTCAATATAATATTATTTTATTCCTAATTTTGAATGGATCGTCAATTTTAATTTTGGGATTATGTGCTTTGTCAAAATTACAATTTTTAAGTAACAAATACAAACAAGTTTATTACATCCAAATGGTATCCATGCACAGCTGGAAGAGCCTTACACCTCACTGCTACTCTCCACCGCCGGCGTTTCCACCGTTACCACCTGATCCTCTTCGCCGTCTCTTCCCCTCAAGCTAAACGACAACGA</genome_strand>
        <mrna_strand>AGGCTAAAAACAAATTACCTCAATATAATATTATTTTATTCCTAATTTTGAATGGATCGTCAATTTTAATTAAAGGATAATGAGCTTTGTCAAAATTACAATTTTTAAGTAACAAATACAAACAAGTTTATTACATTCAAATGGTATCCATGCACAGCTGGAAGAGCCTTACACCTCATTGTTACTCTCCACCGCCGGCTCATCCACCGATACCATCTTATTTTTTTCGGCGTCTCTTTCCCTCAAGCTAAACTACAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597494" ref_strand="+" ref_description="SGN-U597494 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcaaaagcaagccttacagctttcgtaagccttttggcattacagagcgattcagtggatgatttcaggggacggaatttatggattgggctaagccagttcactacatttctatacgttcgattcatcattcttttgcatttttcctttctcttcagaaaacccgatacagcagataaactaaaaatgaagaaggagaagagatacaaatagccttcttttcaagttttccgctacttatttcattagagatgaacagataaatctttcaccaaatttcaaaaaacagttgcttaaccaattgaagaagtttgttgcttctggtgaactaagagcttctacaagcttcgatcgactcggtctgcagctactaaacctaatcgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="28566" stop="29549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28865" g_stop="29249" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U597494" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28865" e_stop="29249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAAGCAAGCCTTAGAGCTTCCGTAAGCCTTTTGGCATTACAGAGCGATTCAATGGATGATTTCAGGGGACGGAATTTAGGGATTGGGCTAAGCCAGTTCACTACATTTCTATACGTTCGATTCATCATTCTTTTGCATTTTTCCTTTCTCTTCAGAAAACCCGATACAGCAGATAAACTAAAAATGAAGAAGGAGAAGAGATACAAATAGCCTTCTTTTCAAGTTTTCCGCTACTTATTTCATTAGAGATGAACAGATAAATTTTTCACCAAATTTCAAAAAACAGTTGCTTAACCAATTGAAGAAGTTTGTTGCTTCTGGTAAACTAAGAGCTTCTACAAGCTTCGATCGACTCGGTCTGCAGCTACTAAACCTAATCGCT</genome_strand>
        <mrna_strand>GCAAAAGCAAGCCTTACAGCTTTCGTAAGCCTTTTGGCATTACAGAGCGATTCAGTGGATGATTTCAGGGGACGGAATTTATGGATTGGGCTAAGCCAGTTCACTACATTTCTATACGTTCGATTCATCATTCTTTTGCATTTTTCCTTTCTCTTCAGAAAACCCGATACAGCAGATAAACTAAAAATGAAGAAGGAGAAGAGATACAAATAGCCTTCTTTTCAAGTTTTCCGCTACTTATTTCATTAGAGATGAACAGATAAATCTTTCACCAAATTTCAAAAAACAGTTGCTTAACCAATTGAAGAAGTTTGTTGCTTCTGGTGAACTAAGAGCTTCTACAAGCTTCGATCGACTCGGTCTGCAGCTACTAAACCTAATCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575037" ref_strand="+" ref_description="SGN-U575037 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157359034|emb|CAO66936.1| (e_value=3e-109) unnamed; (*ATH) AT2G34460.1 (e_value=2e-98) | Symbol: None | flavin reductase-related, low similarity to SP:P30043 Flavin reductase {Homo sapiens} | chr2:14536687-14538037 FORWARD | Aliases: F13P17.33; (*SWP) sp|Q8H124|Y2446_ARATH (e_value=2e-97) Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460; ">
      <seq>aaacctccatacattctctgtccacactaaaaatcacatttttccatcttaaaccaacaacatggaaggaagtgaaatcaaggaggaaaaagaagcaggtattggtcagaagaagaaaatatttgttgctggtgcaactgggaacacagggaagaggattgttgagcagcttttggctaagggttttgctgttaaagctggggttcgtgatgttgacaaggctaaatctgttttacccgaagcaaacccttttcttcaaattgtgaaaaccgatgtgacagagggatcagctaaactagccgatgccattggtgatgattccaatgcggtaatatgtgctacaggtttccagccttcgtggaacttgttgacaccttggaaggttgataattttggcacagtgaaccttgtggatgcatgccaaaaacttggtattgataggttcatccttataagttcaattcttgtcaatggggctgcaatgggtcagttgttcaatccagtctatataatccttaatgttatgggactcgtattggtagcaaagcttcaagctgagagatacattcgaaaatctggcatcaactacacaataattcggcctggtgggctaaaaaacgatcctccacaagggaatatagtcatgcaaccagaggatactctttttcgaggctcaatatctagagatcaggtagctgaagttgcagtcgaggcattgctccatccagaatctcattacaaagtcgtggagatagtggctagtaccgatgcccctaaacgttcattcgaggaactctttggttcaatagaacaacagtgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="44304" stop="40307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44004" g_stop="43944" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43943" i_stop="43848" i_length="96">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43847" g_stop="43647" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="262" r_length="201" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43646" i_stop="42473" i_length="1174">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42472" g_stop="42353" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="382" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42352" i_stop="41149" i_length="1204">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41148" g_stop="40876" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="655" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="40875" i_stop="40774" i_length="102">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.856" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40773" g_stop="40607" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="822" r_length="167" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U575037" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44004" e_stop="43944"/>
          <exon e_start="43847" e_stop="43647"/>
          <exon e_start="42472" e_stop="42353"/>
          <exon e_start="41148" e_stop="40876"/>
          <exon e_start="40773" e_stop="40607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCTCCATACATTCTCTGTCCACACTAAAAATCACATTTTTCCATCTTAAACCAACAACGTACGTCTCTGCAACAAGTTTTCACTTCAAATTTTCAAGAATCTTCTTTATGGGTAATGTATAATTGTGCTTTTAACTTTTCGTTTTTGATTACAGATGGAAGGAAGTGAAATTAAGGAGGAAAAAGAAGCAGGTATTGGTCAGAAGAAGAAAATATTTGTTGCTGGTGCAACTGGGAACACAGGGAAGAGGATTGTTGAGCAGCTTTTGGCTAAGGGTTTTGCTGTTAAAGCTGGGGTTCGTGATGTTGACAAGGCTAAATCTGTTTTACCCGAAGCAAACCCTTTTCTTCAAATTGTGAGTACTACTTTATTTTTCTTTAATTTGGGATTCTTGTTTGCTATAAATTGGTTAATAGCAAAGCTGAGGGGTTTTAGGGCTTTCAGAATCAAGTTGTCAATTTAATAATGTGGTTGTTGAATTAACTTTACTAATTATGGATAATCGAAATAGTATTAAGTTCTTATTATTACTATTAATTGAGAAATTTGACTTTGTTACATAAAGCATGAGTCTGAGCAATAATGATGAATTGTGTTGTTTGAACTCCTAAAAAATGTCAACAACTGAATGTCTGCTTCTCCAAAAGTAGTGTATTTTTGGACGAGAATGAAGAGTCCGCACAACTTAGCTATTGTAAAGTGAAATTCCAATTTATTAATGAGAATGGAGTTGTAATTTGAAATATTACGTGTTTTACAGTAAAATCTGCTTAATTTGTGTACATATGGAAGCTGAAAAACTTGGAGCTCAAATAATCCAATTTTTGATTTTGATTACGAGCCGGAAGCTCTTCTTAAGTTTTTCATAAGAAGCTATAAGTGGGGTGCTGTACTTTGGCGTCGTAGAGTTTTAAGTGCATGAGACTTTGGTATATTCAGTCCAACCAAATAAATATTACAACTTGCAAGTTTAGGTCACAAATTTTTGTTATTTTACCCCGTAAGATTTTTGTTTGGAACTTCCATTTCATTAGTAGGACAGCTTTCTCAAAACATTTTAGAGAATCTAGGAACAAGTGACTATTTATTACTCAGAGAGTCTCGCTTTCCAAACTAGAAAACTTCAAACTTTGTGTTTTTTGATATACATTCTTACCCGCCTATGCGTACTACATGTCTTGCCTTGTCATTTTTACTCAAGCTGTTCTGTAGTTAGTTTTGGAGATGAAATGAAAACTTTCTAACTTTATTATCAGATATTTCAGTTTTTGAATATAGCGATATCTTTAACCTTCTAACTTTGGCCCACAATAAGTCGAATTTCATTTTCAACATGGATAAGACTTGTACTACTTGAACACTGCAATGCTCCAAGTTTAGCTATTTGATATAGGCTAGAAAAAGCTGAATACATTCTTCTGCAAATGGGAAAAATAGATAGTGAAGGAAACATATACCTTCTCTGGAAAGGACCAACTTGTTTATGAATACTCCCGGTGGGAACTCCATATTGTTCTGATTGTTCTCAGGTGAAAACCGATGTGACAGAGGGATCAGCTAAACTAGCCGATGCCATTGGTGATGATTCCAATGCGGTAATATGTGCTACAGGTTTCCAGCCTTCGTGGAACTTGTTGACACCTTGGAAGGTTAGTCAACTTCAATCCACAAAATAGTAGTATTTACCAGATCCTTCACGCCTGATCTTGATGATCAGCAAAGTGAGATATTTTGTGATAGGCTTGATGGGAGTTTCCGTCTCATTTTATGCAATGCACGTCTTTTCAGTACTTAAAGTTTAGTCATATTAGCTTGTTTATCACACTTTGCTTGTTGGTTTACAACTGCAAGAACATGTTGGTGTATTCAATATGGAATCCATAGTCTTTTGGAGAGTCCTCATCATCTTAAAATGTTTCTCGATACGCAGGAAAAAACAGGAAAATGTAAAAGGAGTGACCAACGTTATAGGAATTGAAGTTCAATTTTTTCCGCTTAAAAGAACGTTCTAGTTACTGAATTGGCATTCAAGTATCATCTTGAAGATAATAGACTAATAGTTGTTATGGTGATGGTAGTATTTATTGTTTTGTTTGTTTGCTCCTTTAATTTTACTTCATTACACCTCCTCTTGACATCTTTTAGCCAAGCGCTAGGTAGTTGAGAGTAATTCAAACTCGAAAAGCTTTAATCTCAATTTTTACTGTTATGCATAACAGTCTACTGGCATCAAGAGATTTATCATCTTCATTTCGTTTGGTGAAAGAAAAAAAGAATATTAGCACGTGGAGTGAACGTTTTCTGGCATCAAGAGATTTATCTTCTTCATTTCGTCTGGCGAAAGAAAAAAAGTATATTTGCACGTGGAGTGAAATTTCGAAAGCCTCCTTCTATCTTCCTACTTTCCATTTATTGTTTTCCTTTTCTATTTCTTTGTTTACTTGTCTGCACATTTTAGAAGAACTCCCCGGACAACCAAAATATGAACACCATGAAACTTAATGTATTCCTTCCCCATACGTTAACTACTGTGGGTGTGAAATCGAGTTATTGTAAAAGTAAGTAGTCCGTTTCCAGTAGCTAAAAGTTGGTGCATTTGACAAACCAACCTTTGGAACTTCCTCTCTGGAGTTAAGTTGAGGCAGAGATTACTGTATCAGCTCTTTGACTCAACCCTCTTTAGCTTTCACTTGGGATCTAGAAGCGTCAGTTGTAGAAACTAATATGGTGCTGGGCAATTTTATTAAAAAGAAATGGTCCAAACGATACAATTCTGGAGCATTCAGCTTTCACTTCTCTGATTAACTAGGTTAAAATCAGGAAACGTATCCTATCATTGTTTTATTTTTTCAGGTTGATAATTTTGGCACAGTGAACCTTGTGGATGCATGCCAAAAACTTGGTATTGATAGGTTCATCCTTATAAGTTCAATTCTTGTCAATGGGGCTGCAATGGGTCAGTTGTTCAATCCAGTCTATATAATCCTTAATGTTATGGGACTCGTATTGGTAGCAAAGCTTCAAGCTGAGAGATACATTCGAAAATCTGGCATCAACTACACAATAATTCGGCCTGGTGGGCTAAAAAACGATCCTCCACAAGGGAATATAGTCATGCAACCAGAGGTAACATTATGTATGCTTACCCCTGTAGTGTTCCATTTCAATAATATTCCAGAAGTCCTTCTTTGCATCTAATGTTGCACACTCTCTCTTCCCTCAATTTAGGATACTCTTTTTCGAGGCTCAATATCTAGAGATCAGGTAGCTGAAGTTGCAGTCGAGGCATTGCTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTGGCTAGTACCGATGCCCCTAAACGTTCATTCGAGGAACTCTTTGGTTCAATAGAACAACAGTGACT</genome_strand>
        <mrna_strand>AAACCTCCATACATTCTCTGTCCACACTAAAAATCACATTTTTCCATCTTAAACCAACAAC................................................................................................ATGGAAGGAAGTGAAATCAAGGAGGAAAAAGAAGCAGGTATTGGTCAGAAGAAGAAAATATTTGTTGCTGGTGCAACTGGGAACACAGGGAAGAGGATTGTTGAGCAGCTTTTGGCTAAGGGTTTTGCTGTTAAAGCTGGGGTTCGTGATGTTGACAAGGCTAAATCTGTTTTACCCGAAGCAAACCCTTTTCTTCAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAACCGATGTGACAGAGGGATCAGCTAAACTAGCCGATGCCATTGGTGATGATTCCAATGCGGTAATATGTGCTACAGGTTTCCAGCCTTCGTGGAACTTGTTGACACCTTGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATAATTTTGGCACAGTGAACCTTGTGGATGCATGCCAAAAACTTGGTATTGATAGGTTCATCCTTATAAGTTCAATTCTTGTCAATGGGGCTGCAATGGGTCAGTTGTTCAATCCAGTCTATATAATCCTTAATGTTATGGGACTCGTATTGGTAGCAAAGCTTCAAGCTGAGAGATACATTCGAAAATCTGGCATCAACTACACAATAATTCGGCCTGGTGGGCTAAAAAACGATCCTCCACAAGGGAATATAGTCATGCAACCAGAG......................................................................................................GATACTCTTTTTCGAGGCTCAATATCTAGAGATCAGGTAGCTGAAGTTGCAGTCGAGGCATTGCTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTGGCTAGTACCGATGCCCCTAAACGTTCATTCGAGGAACTCTTTGGTTCAATAGAACAACAGTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575036" ref_strand="+" ref_description="SGN-U575036 Tomato 200607#2 [24 ESTs aligned] (*GB) gi|157359034|emb|CAO66936.1| (e_value=5e-107) unnamed; (*ATH) AT2G34460.1 (e_value=6e-96) | Symbol: None | flavin reductase-related, low similarity to SP:P30043 Flavin reductase {Homo sapiens} | chr2:14536687-14538037 FORWARD | Aliases: F13P17.33; (*SWP) sp|Q8H124|Y2446_ARATH (e_value=5e-95) Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460; ">
      <seq>gaggggctcgagtaagaaaaatcatggctactgccactggtctcttcttccttaaaacatcggccttttctatcacctctaaacggccctctgtttctctttttgtcaataaagttcactcttttcggctcagagcagcaaatatagaagaaagtgaaattgaaggagaagaggaagtgggtatcagtgaaaagaagaaaatatttgttgctggtgcgactgggaacactgggaagaggattgttgagcagcttctggcaaagggttttgctgttaaggctggggttcttgatgttgataaggctaaatcaaccttaccgggtcaaaaccctgatcttcaaattgtgaaagcggatgtcacagagggatcagtaagactagctgatgccattgggaatgattcagatgcagtaatatgtgctacaggatttcggcgttcactggattttttggctccatggaaggttgataactttggcacagtaaaccttgttgaagcatgccgaacacttggtgttaaaagattcctcctcgttagttccattctggtcaatggagctgcaatgggacagttgttcaatccagcatatgtatttctcaatgttcttggactgacattgatagcaaagctccaagcagagcaatatattcgaagatctggcatcaattacacaataataaggcctggtgggctaaaaaacgatccacctcaaggaaacatcgtaatggaacaagaggataccctttacgaaggctcgatatctagagatcaggtagctgaagtagcagttgaggcactactccatccagaatctcattacaaagtcgtggagatagtagctcgtactgatgcccctaaacgttcattcaaggaattatttggttctataaaacagcagtagcttgtcaagatgatgttttatgtctatgtttaagcacacgatttataaatatagttactcaaagatcgtagtgcaacaaatttatattgcaacatccttctctgcaatcttgtaacaatggaagtgaatgattaaaagagagcttattgacccccgtttcatgcgggcgaagggtctaaaggataaacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="48477" stop="44500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48178" g_stop="48036" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48035" i_stop="47905" i_length="131">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47904" g_stop="47704" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="344" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47703" i_stop="47160" i_length="544">
            <donor d_prob="0.375" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47159" g_stop="47040" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="464" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47039" i_stop="45515" i_length="1525">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45514" g_stop="45242" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="737" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45241" i_stop="45150" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45149" g_stop="44793" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="1094" r_length="357" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U575036" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1094</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48178" e_stop="48036"/>
          <exon e_start="47904" e_stop="47704"/>
          <exon e_start="47159" e_stop="47040"/>
          <exon e_start="45514" e_stop="45242"/>
          <exon e_start="45149" e_stop="44793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGGCTCGAGTAAGAAAAATCATGGCTACTGCCACTGGTCTCTTCTTCCTTAAAACATCGGCCTTTTCTATCACCTCTAAACGGCCCTCTGTTTCTCTTTTTGTCAATAAAGTTCACTCTTTTCGGCTCAGAGCAGCAAATGTAAGTCTCTTCTCTAACAAAAAGATCACATTTTTCCTTTCAATTCTCAAGATTACGTAATATTTCAAGAAAATATGCTTCTGCTGTTTGTGGGGTAAGTCATTTTGGTTTTGTATTTTGGTTGATTACAGATAGAAGAAAGTGAAATTGAAGGAGAAGAGGAAGTGGGTATCAGTGAAAAGAAGAAAATATTTGTTGCTGGTGCGACTGGGAACACTGGGAAGAGGATTGTTGAGCAGCTTCTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTCTTGATGTTGATAAGGCTAAATCAACCTTACCGGGTCAAAACCCTGATCTTCAAATTGTGGGTTTGTTAAACTTTTTAGAAATTAAAAGTAGAAGTTAATTGCTTTATCAGTAGTTGATTATGCAGCAAAGTATGCTACTTTGAGGGTTAGATGTTAAGCTAAAAGAAAGTTTTGTTAATAGAGGAAATGCCTTTAAATTTCACCTACTTATATTGGGTTGTCTGTCCAATTCTGTCTTTTTTTTTCTTTTTTTATCTTTCAATTTGAACAAATCTTGATCTTGCTTACACTCCTCCATCAACTTAAAGAGTTTGTTTTGGCTGATGTATTCAGGTGATACTTATTGTATTTTAGATAGGAAAGGATTAAAATTGGAGATTATGTCAAAACCTTTAAAATATGATAATTTCGTATAAAAGGTAATTGAATTTTATTTTTCAAACGAAAGGCATTGCAAATGTATTTAAAAAAATCTGGGAAAAGCTGCTTTTGAATGCAAGTGAAGAGCTAACTATGAAGTACAATGTTCACTTCTATTTTGTAAACCTTCGAGTTATTTCACTTGGAATGACGAAATCAATTCTAATATGTTATTTTCAGGTGAAAGCGGATGTCACAGAGGGATCAGTAAGACTAGCTGATGCCATTGGGAATGATTCAGATGCAGTAATATGTGCTACAGGATTTCGGCGTTCACTGGATTTTTTGGCTCCATGGAAGGTTAGTTGCTACCTTCCCATCCTGTTTTACTTTTAACCTAGCAGTTTACTTATCTTTTCTGAAATTTTATGGTTATGTTTTCTCTTTATGAAATACTGATAGACTCATTTGGATGATCTTTATAATAACTTGAATTGCCGGACGCAAATCCGCTCAAAGGAAAAAGAAAAAAAAGCCAAAATATAATAATTAATAAGATGAAAACAAAAGAAAGAAGTGTTGATTAAGTTTGTCAAGAGTCTATGACTAATTTCAGTTACAGAAGCCTCTTTACATGATGACACCCTTTCCACCGTTGCTACCCATGCACACATTCTTGGAATTGGAAAAATATTACAAAGTCTTTTTTGTTCTTTTAAGATTCACAATGGAGACTTTTATGAGTATGATACCACAAGATATTGCTGCTGACACCTCATATTGTAGATAGGGTCTTTCGAGTTAAGGAAACTTCATTCCATTGACGATTTGTCTACACTGCAGAAAAGTTAATGGAAGACTGAACAGTTTCATGTTACTAATATTTTTTTTTCTGTTTATGGAGACTTTTCATTCTTTTCTCAGAATCCAGGGGAGCAGGTTGTTATTATCAATTGTTTCTCTGATGGGGTTGTTGGTTCAATTGTTTCTTCTTTTTTTCTCCTTTTCCCCTGCTTTTTGTGCTACTATTAATCCATCCTAGGTCTGCCATTTAAGCTAATTTCAAATTTGAACAGTTTAGTACGCCAATTTAAACTTTAAGATCTTAGCTTCATAATAATGCCTGTTATAACGCCTGGAAAACAGGAATCAAGAATGGCGTGGTTAAGCAGGTTAAGGCCTACTAGGTTGAACTCAGAATGGATCTACTGTCAGAAAATCAATTATTGTTGAACCGTTGGTCGTGTTTCAGGTTTATGAAAGAATTCCTTGCCTGTTAAGTAAAGCACCATTCTTGATTTCCTTCCATAGCTCTCAACCGGATTGGATGTGATTGAGGATCTCCAGAGGCACACCAAATAAGCTAATGCCAGAAATTATAATAGAATAACATAAGTAACCTGTGGGAGCTTCGAGAAAAAGTTATTTTGTACACTTATCTGTCCGTTCCGCAGATGAAGCAAACATCATATCGGTTCTGATGTTTGCTTAGGGGTTGAATGCTTAATACAATCAAAAAGTTGAGAAGGCTTCTCGAATGTTTTCAAGCAAAAACTTGAGAGCAAGACTGGAAATGTTCTAAAATGTATAGGGTGCTAACGTATATCATCTTATTTCCTTGGCTTGCTTTCACCTTAGATTTGTTTATGTTCCTTCTACACATTTATTATGGCCAAAAGGCCTTTTGTTGATGTCTTGCCTTCCAGATCATCAAACTCACAACCTTCTCTTGGTTATTCTACTTGAGTAAATTATGAAGCAATTATCAGATCTTCGAGTTGTTGAATCACTTCCCTAATTATTATTTTGGTGGGGTTTTGATGAATTATGCATCATTGTCCTTCCACTACTATTGTTTAATCCCTACTGTACCATTCTTGATCAGGTTGATAACTTTGGCACAGTAAACCTTGTTGAAGCATGCCGAACACTTGGTGTTAAAAGATTCCTCCTCGTTAGTTCCATTCTGGTCAATGGAGCTGCAATGGGACAGTTGTTCAATCCAGCATATGTATTTCTCAATGTTCTTGGACTGACATTGATAGCAAAGCTCCAAGCAGAGCAATATATTCGAAGATCTGGCATCAATTACACAATAATAAGGCCTGGTGGGCTAAAAAACGATCCACCTCAAGGAAACATCGTAATGGAACAAGAGGTAGCAATATGCAGCTTACTCGTTGTCTGATTACGTGTATGTGCGCCATATGATTTTCCTAATATTCTCCTTGCTTTTCCTTTAAAATGTAGGATACCCTTTACGAAGGCTCGATATCTAGAGATCAGGTAGCTGAAGTAGCAGTTGAGGCACTACTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTAGCTCGTACTGATGCCCCTAAACGTTCATTCAAGGAATTATTTGGTTCTATAAAACAGCAGTAGCTTGTCAAGATGATGTTTTATGTCTATGTTTAAGCACACGATTTATAAATATAGTTACTCAAAGATCGTAGTGCAACAAATTTATATTGCAACATCCTTCTCTGCAATCTTGTAACAATGGAAGTGAATGATTGAAAGAGAGCTTATTGACCCCCGTTTCACGCGGGCGAAGGGTCTAAAGGATACGTAGCT</genome_strand>
        <mrna_strand>GAGGGGCTCGAGTAAGAAAAATCATGGCTACTGCCACTGGTCTCTTCTTCCTTAAAACATCGGCCTTTTCTATCACCTCTAAACGGCCCTCTGTTTCTCTTTTTGTCAATAAAGTTCACTCTTTTCGGCTCAGAGCAGCAAAT...................................................................................................................................ATAGAAGAAAGTGAAATTGAAGGAGAAGAGGAAGTGGGTATCAGTGAAAAGAAGAAAATATTTGTTGCTGGTGCGACTGGGAACACTGGGAAGAGGATTGTTGAGCAGCTTCTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTCTTGATGTTGATAAGGCTAAATCAACCTTACCGGGTCAAAACCCTGATCTTCAAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGCGGATGTCACAGAGGGATCAGTAAGACTAGCTGATGCCATTGGGAATGATTCAGATGCAGTAATATGTGCTACAGGATTTCGGCGTTCACTGGATTTTTTGGCTCCATGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATAACTTTGGCACAGTAAACCTTGTTGAAGCATGCCGAACACTTGGTGTTAAAAGATTCCTCCTCGTTAGTTCCATTCTGGTCAATGGAGCTGCAATGGGACAGTTGTTCAATCCAGCATATGTATTTCTCAATGTTCTTGGACTGACATTGATAGCAAAGCTCCAAGCAGAGCAATATATTCGAAGATCTGGCATCAATTACACAATAATAAGGCCTGGTGGGCTAAAAAACGATCCACCTCAAGGAAACATCGTAATGGAACAAGAG............................................................................................GATACCCTTTACGAAGGCTCGATATCTAGAGATCAGGTAGCTGAAGTAGCAGTTGAGGCACTACTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTAGCTCGTACTGATGCCCCTAAACGTTCATTCAAGGAATTATTTGGTTCTATAAAACAGCAGTAGCTTGTCAAGATGATGTTTTATGTCTATGTTTAAGCACACGATTTATAAATATAGTTACTCAAAGATCGTAGTGCAACAAATTTATATTGCAACATCCTTCTCTGCAATCTTGTAACAATGGAAGTGAATGATTAAAAGAGAGCTTATTGACCCCCGTTTCATGCGGGCGAAGGGTCTAAAGGATAAACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570382" ref_strand="+" ref_description="SGN-U570382 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157359033|emb|CAO66935.1| (e_value=1e-37) unnamed; (*ATH) AT5G46280.1 (e_value=8e-24)  Symbol: None | DNA replication licensing factor, putative, similar to SP:Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family | chr5:18786924-187... ; (*SWP) sp|Q9SX04|MCM32_MAIZE (e_value=1e-33) DNA replication licensing factor MCM3 homolog 2 OS=Zea mays GN=ROA2; ">
      <seq>gcgagcttaggagtgccagttcgaatgcaaagactgggggaggaacacttccaattactgccagaactttggaaacaattattcggctctcaactgcccatgccaagctgaagttgagaagacaggttttgaagtctgatgtagaagctgctcttcaagttctacattttgccatatatcatcaagaactgactgagatggaggaacgtgaacaagagagagcaaaggaattggggaagaagcgcagtactgaccatgatggaggtaacaatgcttcagctcgtaaacgcagagccgagcatgatgcaggtgatgaatcagctgatcatgaagccggaggagtaggtgaagcgatggaaactgatgatactccagcagctgagatcagcacatctcctgagagattgcaagcattcagtgcagcacttggtaggcacaggaacttacaacatgtggaacaaattccagttgctgatgtggagaatgttgtcaacaatggggcgactgtaccttactcaaaggcggagatagagaaattattaaagatgatggaagagaaaggccaattgtgggtacacagtgataccaatgtagtttacttcatgtaaatcggtccaattggagcgctcgcaagttcagttgtctcctttctgatggattgtccaagcctaactatatggggggatacaccatttgttattgaaccatagcttctctttatgtttctgatagtattatggtattcatctatttatccccactttgatattcaggatctgatgaagcacatgaatcttactttttctgttttagggaaaaactaaatggttaatgcattatgtaatatacaatttatgatgatcgtctctttcaactgaaaagttgcaattcacgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="51383" stop="49049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51084" g_stop="51053" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51052" i_stop="50969" i_length="84">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50968" g_stop="50876" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="125" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50875" i_stop="50636" i_length="240">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50635" g_stop="50415" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="346" r_length="221" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50414" i_stop="50146" i_length="269">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50145" g_stop="50089" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="403" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50088" i_stop="49999" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="49998" g_stop="49857" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="545" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="49856" i_stop="49700" i_length="157">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49699" g_stop="49348" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="897" r_length="352" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U570382" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51084" e_stop="51053"/>
          <exon e_start="50968" e_stop="50876"/>
          <exon e_start="50635" e_stop="50415"/>
          <exon e_start="50145" e_stop="50089"/>
          <exon e_start="49998" e_stop="49857"/>
          <exon e_start="49699" e_stop="49348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAGCTTAGGAGTGCCAGTTCGAATGCAAAGGTTGGAATTTTATGTCTGATATCCAGATAACTAGCTTGTTATGCTCTTTATGTGATGTAACTGATTTTTCTTAATTTCCATTAGACTGGGGGAGGAACACTTCCGATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAGGTGAGGACTTATTTGATTACAAGTCTTATATAGGAAGATTGAAGTTCCCCATATATGCTTAGGATTAGAGGTTCACTGAATATAAAAACCATCATCAACAGAAATTGACCAGTTCTTGACTTTAATCAATGAATTTGGTAAATAACCAAAATTGAGTTTTCTAGTTTCATTCTTTCCATGATTATCTGCTCTGTATGGATCTATTTTGCTCAAAATTTGTTTCCATTTCTTTTCTGGCAGGTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGATGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGGGTGAGTTCCTAACTATAAAATATACATAGTCCAGCTATCATCAATATTTTCTAGTCTTGGGGATATCTTGTTTTTCTGCAGGTATGTTTTTTGGTAAGTGGTTTTCTGATAACTTTTATGTTCTTTCATCAAGTAAACAGAAGTAGATTGCAACTTCCTCACATTTATTTACTTTGATGATCTATCTATATGGTGTTTGCTTGTTTTATCTATTATGATGTTTCCTTGTAATGTTTATGTTTCTGAAGTGTTCTTTTGGAAAGTGGTAGTGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAGGTCTGTGTAATTAACTTTATGATCGTTGAATGCATTTACTTTTTACTCTGGGGTTGTCAATTATGGAACCTAACATCGCTGAACTTGCAGATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCAACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTAAAGGTATGCAAGTACTTTGATTACAAATTTCTTTGATGTCCCTAGTTCCAAATGTATGTGTATATTACCTCTTAATTCACAACACTGAAATGTGTATCAGTTGGATACAATAGTTTTTGAATGTATAAACAGCTAACAGAGAAAGTGCTCTAATATGCAGATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCGGTCCAATTGGAGCGCTCGCAAGTTCAGTTGTCTCCTTTCTGATGGATTGTCCAAGCCTAACTAAATGGGGGGATACACCATTTGTTATTGAACCATAGCTTCTCTTTATGTTTCTGATAGTATTATGGTATTCATCTATTTATCCCCACTTTGATATTCAGGATCTGATGAAGCACATGAATCTTACTTTTTCTGTTTTAGGGAAAAACTAAATGGTTAATGCATTATGTAATATACAATTTATGATGATCGTCTCTTTCAATTGAAAAGTTGCAATTCACGTTA</genome_strand>
        <mrna_strand>GCGAGCTTAGGAGTGCCAGTTCGAATGCAAAG....................................................................................ACTGGGGGAGGAACACTTCCAATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAG................................................................................................................................................................................................................................................GTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGGTGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGG.............................................................................................................................................................................................................................................................................TGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAG..........................................................................................ATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCAACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTAAAG.............................................................................................................................................................ATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCGGTCCAATTGGAGCGCTCGCAAGTTCAGTTGTCTCCTTTCTGATGGATTGTCCAAGCCTAACTATATGGGGGGATACACCATTTGTTATTGAACCATAGCTTCTCTTTATGTTTCTGATAGTATTATGGTATTCATCTATTTATCCCCACTTTGATATTCAGGATCTGATGAAGCACATGAATCTTACTTTTTCTGTTTTAGGGAAAAACTAAATGGTTAATGCATTATGTAATATACAATTTATGATGATCGTCTCTTTCAACTGAAAAGTTGCAATTCACGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595753" ref_strand="+" ref_description="SGN-U595753 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359033|emb|CAO66935.1| (e_value=4e-58) unnamed; (*ATH) AT5G46280.1 (e_value=2e-41)  Symbol: None | DNA replication licensing factor, putative, similar to SP:Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family | chr5:18786924-187... ; (*SWP) sp|Q9SX03|MCM33_MAIZE (e_value=5e-54) DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3; ">
      <seq>ggcaaaatgacaaggatgaaatgcccgtctatgttaagtataatcggatgctacatggtagaaattctactcggagcaagaaggatacattgaccatccagtttctcaagacttacattcattatgcaaaaaacaggatccatcctgagctgactgatgaggcatctgataacatagctactgcttatgccgagcttaggagtgccagttcgaatgcaaagactgggggaggaacacttccgattactgccagaactttggaaacaattattcggctctcaactgcccatgccaagctgaagttgagaagacaggttttgaagtctgatgtagaagctgctcttcaagttctacattttgccatatatcatcaagaactgactgagatggaggaacgtgaacaagagagagcaaaggaattggggaagaagcgcagtactgaccatgatggaggtaacaatgcttcagctcgtaaacgcagagccgagcatgatgcagatgatgaatcagctgatcatgaagccggaggagtaggtgttcttttggaaagtggtagtgaagcgatggaaactgatgatactccagcagctgagatcagcacatctcctgagagattgcaagcattcagtgcagcacttggtaggcacaggaacttacaacatgtggaacaaattccagttgctgatgtggagaatgttgtccacaatggggcgactgtaccttactcaaaggcggagatagagaaattattanagatgatggaagagaaaggccaattgtgggtacacagtgataccaatgtagtttacttcatgtaaatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="51765" stop="49333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51466" g_stop="51306" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51305" i_stop="51113" i_length="193">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51112" g_stop="51053" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="221" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51052" i_stop="50969" i_length="84">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50968" g_stop="50876" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="314" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50875" i_stop="50636" i_length="240">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50635" g_stop="50415" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="535" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50414" i_stop="50167" i_length="248">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50166" g_stop="50089" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="613" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50088" i_stop="49999" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49998" g_stop="49857" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="755" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="49856" i_stop="49700" i_length="157">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="49699" g_stop="49633" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="822" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U595753" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51466" e_stop="51306"/>
          <exon e_start="51112" e_stop="51053"/>
          <exon e_start="50968" e_stop="50876"/>
          <exon e_start="50635" e_stop="50415"/>
          <exon e_start="50166" e_stop="50089"/>
          <exon e_start="49998" e_stop="49857"/>
          <exon e_start="49699" e_stop="49633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAAATGACAAGGATGAAATGCCCGTCTATGTTAAGTATAATCGGATGCTACATGGTAGAAATTCTACTCGGAGCAAGAAGGATACATTGACCATCCAGTTTCTCAAGACTTACATTCATTATGCAAAAAACAGGATCCATCCTGAGCTGACTGATGAGGTAATTAAGTGTAACTTTTGCAGTTGCATAGCATCATTGCATTTTCATGCAGGATTAATTTCTTTATGCCTTGTAAATTTGAATTTTGAAATACTCCTTGAGAATTAGCTGTAATTAACCTTTGTCATATCTTAGCTCCCCTTGATCAATGTACTGCTCTCTTGCTGATATTTATAATGATAATCATTTGTAGGCATCTGATAACATAGCTACTGCTTATGCCGAGCTTAGGAGTGCCAGTTCGAATGCAAAGGTTGGAATTTTATGTCTGATATCCAGATAACTAGCTTGTTATGCTCTTTATGTGATGTAACTGATTTTTCTTAATTTCCATTAGACTGGGGGAGGAACACTTCCGATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAGGTGAGGACTTATTTGATTACAAGTCTTATATAGGAAGATTGAAGTTCCCCATATATGCTTAGGATTAGAGGTTCACTGAATATAAAAACCATCATCAACAGAAATTGACCAGTTCTTGACTTTAATCAATGAATTTGGTAAATAACCAAAATTGAGTTTTCTAGTTTCATTCTTTCCATGATTATCTGCTCTGTATGGATCTATTTTGCTCAAAATTTGTTTCCATTTCTTTTCTGGCAGGTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGATGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGGGTGAGTTCCTAACTATAAAATATACATAGTCCAGCTATCATCAATATTTTCTAGTCTTGGGGATATCTTGTTTTTCTGCAGGTATGTTTTTTGGTAAGTGGTTTTCTGATAACTTTTATGTTCTTTCATCAAGTAAACAGAAGTAGATTGCAACTTCCTCACATTTATTTACTTTGATGATCTATCTATATGGTGTTTGCTTGTTTTATCTATTATGATGTTTCCTTGTAATGTTTATGTTTCTGAAGTGTTCTTTTGGAAAGTGGTAGTGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAGGTCTGTGTAATTAACTTTATGATCGTTGAATGCATTTACTTTTTACTCTGGGGTTGTCAATTATGGAACCTAACATCGCTGAACTTGCAGATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCAACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTAAAGGTATGCAAGTACTTTGATTACAAATTTCTTTGATGTCCCTAGTTCCAAATGTATGTGTATATTACCTCTTAATTCACAACACTGAAATGTGTATCAGTTGGATACAATAGTTTTTGAATGTATAAACAGCTAACAGAGAAAGTGCTCTAATATGCAGATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCG</genome_strand>
        <mrna_strand>GGCAAAATGACAAGGATGAAATGCCCGTCTATGTTAAGTATAATCGGATGCTACATGGTAGAAATTCTACTCGGAGCAAGAAGGATACATTGACCATCCAGTTTCTCAAGACTTACATTCATTATGCAAAAAACAGGATCCATCCTGAGCTGACTGATGAG.................................................................................................................................................................................................GCATCTGATAACATAGCTACTGCTTATGCCGAGCTTAGGAGTGCCAGTTCGAATGCAAAG....................................................................................ACTGGGGGAGGAACACTTCCGATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAG................................................................................................................................................................................................................................................GTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGATGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGG........................................................................................................................................................................................................................................................TGTTCTTTTGGAAAGTGGTAGTGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAG..........................................................................................ATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCCACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTANAG.............................................................................................................................................................ATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570383" ref_strand="+" ref_description="SGN-U570383 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|3894099|emb|CAA10166.1| (e_value=2e-118) MCM3 protein [Pisum sativum]; (*ATH) AT5G46280.1 (e_value=2e-112)  Symbol: None | DNA replication licensing factor, putative, similar to SP:Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family | chr5:18786924-187... ; (*SWP) sp|Q9SX03|MCM33_MAIZE (e_value=8e-117) DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3; ">
      <seq>accatctatttatgggcatttgtggataaagaaagcaggtgttctgctcatgcttggtggaattgaaaagaacttgaaaaatgggactcacttaagaggtgatataaacatgatgatggttggtgatccatctgttgccaagtctcagctgctgacagcaattatgaatattgctccgttagcaatatcaactactggtcgtggttcttccggagttggtttgacagctgcagttacttctgatcaagaaacaggagaaagaaggctagaagctggtgccatggtacttgctgacagaggtgttgtttgcattgatgagtttgataaaatgaatgaccaagatcgagttgccatacatgaggttatggaacagcagactgtaaccattgctaaagcaggaattcatgcatccttgaatgctcgatgcagtgtagttgcagctgcaaatcccatatatggttcttacgaccgatcattaactccaacaaagaacattggacttccagactcactgctctctcgttttgatttgttgtttattgttctggatcaaatggatcctggggttgatcgtcaaatttctgagcatgttctgcgcatgcatcggtatcgttctccaatagatggaggtagctcaacactagataatgattcaagatatgaagagcaaaatgacaaggatgaaatgcccgtctatgttaagtataatcggatgctacatggtagaaattctactcggagcaaggaagatacattggccatccagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="52881" stop="51064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52581" g_stop="52483" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52482" i_stop="52275" i_length="208">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52274" g_stop="52120" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="254" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52119" i_stop="52050" i_length="70">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52049" g_stop="51841" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="463" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51840" i_stop="51754" i_length="87">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51753" g_stop="51588" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="629" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51587" i_stop="51503" i_length="85">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51502" g_stop="51364" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="768" r_length="139" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U570383" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52581" e_stop="52483"/>
          <exon e_start="52274" e_stop="52120"/>
          <exon e_start="52049" e_stop="51841"/>
          <exon e_start="51753" e_stop="51588"/>
          <exon e_start="51502" e_stop="51364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATCTATTTATGGGCATTTGTGGATAAAGAAAGCAGTTGTTCTGCTCATGCTTGGTGGAATTGAAAAGAACTTGAAAAATGGGACTCACTTAAGAGGGTAAGATAAACTATTTTACCTTCGGTAAGGCTACATTTTGCTGTCCTTGGCACTTAGCACCAATGCAGACATTACTGCTTGACCATGTGAACGCAGTCTTTTTTTCTCCAGTTCATTCAGACAACTATCATAATTTTTTATGTACTGTGACTCCTCTATATGAGATTGATTCTTGAGGTCTCACAACAACCATTTTTACTGTATTTAGTGATATAAACATGATGATGGTTGGTGATCCATCTGTTGCCAAGTCTCAGCTGCTGAGAGCAATTATGAATATTGCTCCGTTAGCAATATCAACTACTGGTCGTGGTTCTTCCGGAGTTGGTTTGACAGCTGCAGTTACTTCTGATCAAGAAACAGGTAATTTTTTTTCAAAAGCAGAATCTACTTTGTATGTAAAGTAAACTGACAAATATGTACTTGGAAATAGGAGAAAGAAGGCTAGAAGCTGGTGCCATGGTACTTGCTGACAGAGGTGTTGTTTGCATTGATGAGTTTGATAAAATGAATGACCAAGATCGAGTTGCCATACATGAGGTTATGGAACAGCAGACTGTAACCATTGCTAAAGCAGGAATTCATGCATCCTTGAATGCTCGATGCAGTGTAGTTGCAGCTGCAAATCCCATATATGGTTCTGTAAGTTTTTCATAAACAGGTCCATCTAAATGCGTAATAGCCTTGAGATATGTATCATTTAACTTTTCTGTAATCTTGTTTTGACAGTACGACCGATCATTAACTCCAACAAAGAACATTGGACTTCCAGACTCACTGCTCTCTCGTTTTGATTTGTTGTTTATTGTTCTGGATCAAATGGATCCTGGGGTTGATCGTCAAATTTCTGAGCATGTTCTGCGCATGCATCGGTATCGTTCTCCAATAGATGGAGGTAGGTTGGCAGTTATGTTTGAAAATCTGCATGCATTGCCTTTTCCTAGTTTGTATGAATGAAGTGAATCTATTTTACCTTTTAGGTAGCTCAACACTAGATAATGATTCAAGATATGAAGAGCAAAATGACAAGGATGAAATGCCCGTCTATGTTAAGTATAATCGGATGCTACATGGTAGAAATTCTACTCGGAGCAAGAAGGATACATTGACCATCCAGTT</genome_strand>
        <mrna_strand>ACCATCTATTTATGGGCATTTGTGGATAAAGAAAGCAGGTGTTCTGCTCATGCTTGGTGGAATTGAAAAGAACTTGAAAAATGGGACTCACTTAAGAGG................................................................................................................................................................................................................TGATATAAACATGATGATGGTTGGTGATCCATCTGTTGCCAAGTCTCAGCTGCTGACAGCAATTATGAATATTGCTCCGTTAGCAATATCAACTACTGGTCGTGGTTCTTCCGGAGTTGGTTTGACAGCTGCAGTTACTTCTGATCAAGAAACAG......................................................................GAGAAAGAAGGCTAGAAGCTGGTGCCATGGTACTTGCTGACAGAGGTGTTGTTTGCATTGATGAGTTTGATAAAATGAATGACCAAGATCGAGTTGCCATACATGAGGTTATGGAACAGCAGACTGTAACCATTGCTAAAGCAGGAATTCATGCATCCTTGAATGCTCGATGCAGTGTAGTTGCAGCTGCAAATCCCATATATGGTTCT.......................................................................................TACGACCGATCATTAACTCCAACAAAGAACATTGGACTTCCAGACTCACTGCTCTCTCGTTTTGATTTGTTGTTTATTGTTCTGGATCAAATGGATCCTGGGGTTGATCGTCAAATTTCTGAGCATGTTCTGCGCATGCATCGGTATCGTTCTCCAATAGATGGAG.....................................................................................GTAGCTCAACACTAGATAATGATTCAAGATATGAAGAGCAAAATGACAAGGATGAAATGCCCGTCTATGTTAAGTATAATCGGATGCTACATGGTAGAAATTCTACTCGGAGCAAGGAAGATACATTGGCCATCCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575095" ref_strand="+" ref_description="SGN-U575095 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157359033|emb|CAO66935.1| (e_value=2e-88) unnamed; (*ATH) AT5G46280.1 (e_value=2e-80)  Symbol: None | DNA replication licensing factor, putative, similar to SP:Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family | chr5:18786924-187... ; (*SWP) sp|Q9SX03|MCM33_MAIZE (e_value=1e-80) DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3; ">
      <seq>gctctcctccatttctctctctctcacacagattaacacttactcagtcagccatggatctaagcgacgaggttagggctacgcataagcgaactttcctcaagttcttcgaacaaactgaactggacacggagctgaagaaggaatttgaatctatgatcaacaacaataggcgtcgtgtcattatggacctcgctgatttctacaatgacagagaaggctctgatttggctcgcaggcttcttcagaatcctagtgagtatatgcaaccgttgattgatgctttaaccgatatgatccggacccataatcccaagtaccttaaagaaggcgagcaagtcttggttgggtttactggtccttttgtttcgaggagagtaaccccaagagagctgttgtcccgtttcattggttccatggtttgcgttgaaggcattgttaccaagtgttctcttgtgaggccaaaggttgtaaagagcgtccacttttgtccgacaactgagaaatttacggcccgtgaatacagagatatcacatcgaatgttggtctgccaactgggtctgtgtacccgacacgggatgataatggcaatttgctagttactgagtacggtttatgcacatacaaagatcatcaaactttatcaatgcaagaagtgccctgaaaattctgctcctggtcaacttcctagaacagtggatatagtcgtagaggatgatcttgttgattcatgcaagcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="56132" stop="52591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55844" g_stop="55722" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55721" i_stop="55588" i_length="134">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55587" g_stop="55469" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="238" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55468" i_stop="55189" i_length="280">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55188" g_stop="54980" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="447" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54979" i_stop="53270" i_length="1710">
            <donor d_prob="0.917" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53269" g_stop="53139" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="578" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53138" i_stop="53053" i_length="86">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53052" g_stop="52891" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="741" r_length="163" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U575095" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55844" e_stop="55722"/>
          <exon e_start="55587" e_stop="55469"/>
          <exon e_start="55188" e_stop="54980"/>
          <exon e_start="53269" e_stop="53139"/>
          <exon e_start="53052" e_stop="52891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTCCTCCATTTCTCTCTCTCTCTCACACAGAGATTAACACTTACTCAGTCAGCCATGGATCTAAGCGACGAGGTTAGGGCTACGCATAAGCGAACTTTCCTCAAGTTCTTCGAACAAACTGTAAGTATTTTCTCCTTTTTTTTCTTTCTTCGCATGTTTTATACTTGATTAATTTGGTTAATTTTATGGAGTCTGAGTTGTATTTATTTATTCGTTTGTTTTTGCTTTTTTTGATTCACTTTTTACTTTTGTAGGAACTGGACACGGAGCTGAAGAAGGAATTTGAATCTATGATCAACAACAATAGGCGTCGTGTCATTATGGACCTCGCTGATTTCTACAATGACAGAGAAGGCTCTGATTTGGCTCGCAGGTTTTAATCTTTTTCATTAATTTTAGTGACGTCATTTTTGGCTTGTATAATTCGAGGAGAAAATCAAGAGTGGTTTTGGGTTTGTGTTTTTGAAATTGAAGTACTACCCTAGGCTTGTTGGTGTTGTTTTTCTAGTTTATTTGCTTTCAGGTGCAAATTTGATGGGGGAAAATGTTGAAAAAGACAAGTTTTTTGATATTTTCCAAGTATTGAAGTTTACCTGGGATTATTGATATTGTTGGTCCGGCTTATAAATTTCTTCTTTTCTTGAATTGTGTAGGCTTCTTCAGAATCCTAGTGAGTATATGCAACCGTTGATTGATGCTTTAACCGATATGATCCGGACCCATAATCCCAAGTACCTTAAAGAAGGCGAGCAAGTCTTGGTTGGGTTTACTGGTCCTTTTGTTTCGAGGAGAGTAACCCCAAGAGAGCTGTTGTCCCGTTTCATTGGTTCCATGGTTTGCGTTGAAGGCATTGTTACCAAGTGTACGTCTTTTGAATTTGCTTATAGCGCTCATTTTTAGCTCATATCTACTTTGACTGTGGTATTATGCCAGTGTATTATATAAATCTTAAATTAATCATATTTACTCCATTACCGATAATTTAGCCAACAAAGTAAGGCCACTAAATTTATTTTAATTGATGTGTCTTAGATTCACTCCAAAGTTAACGAGTCAGTAGGAAGGCCTAATACATTTCTGAGTCATTTTTGTACTGTGAGTATAGCTCATTTGGAGTCTATGGTGAAAATTTTGATGAATATTTTGTTTTATTAAAAATGCTTTTATAATGGTAAAAGCAATGAAAATGGGGAACTATTTATCTGGTGGGTAGTTGTTTATTGCTTTTAAAATGGTAAACCCAATAAAAATGGGGAACTATTTACTTGGTGGATAGTTGTTTTACACGTGCCGCAAAGGTTTGGGTGATATGATACAACTGATATGTGTTTGACAGCTGTATGTTAGCAGCAATTTTTCATTAGAAATGACCTCTGAAATATATTCATGTCCATTTCACAGGGGAAGACGTGTATATGTCCAGTGAACAAAGTTATGGTGATATAGTAGTTTCTTGTTTGTAGTGGGCCATGTCTATATCAGTACCAGTTGCTAGTAAAGGGATGATGAAAACTGGACTTTCTAGGACTGTAGTACTAGTATTATATGGTTCAACTGATTAACTAAGAAGAATTATTGATTTCTAAATTGGACATGAGATTACCAATTATATCCATTTTTATTGGTGATTATTATGTTCCTTGAATGCATCACGTAAGCATTTGAGATGTTTGGTAGTTTCAATAACCAGTGTGCAGTTTGCTGGTGTGGAATTGGGAAAAGATTGCATGTCATGGATACTAAGCTGTTAGCACAAGTTTAGCTTAAGTACTGTTAGCACAAGTGTAGCATAAAGTACTGGACTTGTGCTTATTAGAATTGGTTCCATAGTGGTGCAATTGTGCAACTGGAGAGTGACCCTTGTTACTTCTGCACTGTATAGTTGTGCCTTTTCTTCTAAATGCACTGTATGATCAATAATTTGCAAGCTTCCTTCTTCCTGATATGCATTTACTCGTGCCATTGCCAAGTATAGCACAAGAATTGGAACTTCATCCAGTTGTGCATATTTGTTTTCCAAAACTAAACCAATTTTATCCTTTAGCTTCCTACATCACCAAATAATATGATTAACCATAGTTGGGCGTATTTAAATTCAAAAGCATATCAAAGGGCAATAAATACAGAGAGTTGATAGAAGCAATAAGATGATAAAATATGCCAAACATCATTAGTTTGACTATGCTGTCTTCTGTTGTTTTGTTTCATTATTAAAATCCATTTTCTACTTGATTTTTCCTGCTCATGTTTGCAATCTGAAGTATTTGATAATATAAAACACATATTCTTTGTTATTTCTTGTTGTTTATAACTGAAATATGTGTCTAAATTTCATTCTCTAGTCAAAGAGAAACATGAGATAAGTTGATGCTAGGGCAGATTTCATCTGTCATCAGCTGAAGTTTTTGAGTCATGAATCATCTTCTTGTTTTATATTTAGTCCTTAGCTTGCTGCAACTTTGAGTTATAAATCATTTTCTTGTTTTATATTGAGCCCTAGCTTGGATGCCACTTAGTAATTGACTCTTTTAATAAAATTTATTAATGAAAGTTGCTACTTCAATATCTATAGGTTCTCTTGTGAGGCCAAAGGTTGTAAAGAGCGTCCACTTTTGTCCGACAACTGAGAAATTTACGGCCCGTGAATACAGAGATATCACATCGAATGTTGGTCTGCCAACTGGTTCTGTGTACCCGACACGGGTAATGATGAACTGATATAGGTTTCAGTTTTGGCCTTCTCTATTTGTTTAGCTAAACAGAATTTCACAAGAGTGATTATGTTGCAGGATGATAATGGCAATTTGCTAGTTACTGAGTACGGTTTATGCACATACAAAGATCATCAAACTTTATCAATGCAAGAGGTGCC-TGAAAATTCTGCTCCTGGTCAACTTCCTAGAACAGTGGATATAGTCGTAGAGGATGATCTTGTTGATTCATGCAAGCCT</genome_strand>
        <mrna_strand>GCTCTCCTCCA-TT-TCTCTCTCTCTCACAC--AGATTAACACTTACTCAGTCAGCCATGGATCTAAGCGACGAGGTTAGGGCTACGCATAAGCGAACTTTCCTCAAGTTCTTCGAACAAACT......................................................................................................................................GAACTGGACACGGAGCTGAAGAAGGAATTTGAATCTATGATCAACAACAATAGGCGTCGTGTCATTATGGACCTCGCTGATTTCTACAATGACAGAGAAGGCTCTGATTTGGCTCGCAG........................................................................................................................................................................................................................................................................................GCTTCTTCAGAATCCTAGTGAGTATATGCAACCGTTGATTGATGCTTTAACCGATATGATCCGGACCCATAATCCCAAGTACCTTAAAGAAGGCGAGCAAGTCTTGGTTGGGTTTACTGGTCCTTTTGTTTCGAGGAGAGTAACCCCAAGAGAGCTGTTGTCCCGTTTCATTGGTTCCATGGTTTGCGTTGAAGGCATTGTTACCAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCTTGTGAGGCCAAAGGTTGTAAAGAGCGTCCACTTTTGTCCGACAACTGAGAAATTTACGGCCCGTGAATACAGAGATATCACATCGAATGTTGGTCTGCCAACTGGGTCTGTGTACCCGACACGG......................................................................................GATGATAATGGCAATTTGCTAGTTACTGAGTACGGTTTATGCACATACAAAGATCATCAAACTTTATCAATGCAAGAAGTGCCCTGAAAATTCTGCTCCTGGTCAACTTCCTAGAACAGTGGATATAGTCGTAGAGGATGATCTTGTTGATTCATGCAAGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578896" ref_strand="+" ref_description="SGN-U578896 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|294668|gb|AAA33873.1| (e_value=0) beta-ketoacyl-ACP synthase; (*ATH) AT5G46290.1 (e_value=0)  Symbol: None | 3-oxoacyl-(acyl-carrier-protein) synthase I, identical to Swiss-Prot:P52410 3-oxoacyl-(acyl-carrier-protein) synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (Arabidopsis thaliana) | chr5:18791313... ; (*SWP) sp|P52410|KASC1_ARATH (e_value=0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1; ">
      <seq>gccttggtttctctctttctgtacaagcacaaaacacacactccctttctctctctaaaaatagtagtaatacactcgcatcgttaacatcgaaaagctttttgctgctgcttcttcttcttcttcttgctccgccacctcaaatctgaaaacccatttcagttaacaatggaagcaatccaatctctatcatttcgtccgtctccactcgaacctctacgaaaaaacatcccccagttcaccaatgtgaggtcattgggtgctaaaagagtgcctttaacagtaacagcttctgcatctactgtttctgctccaaaaagagagaaagacccaaagaaaagggttgttataactgggacgggtcttgtttctgtgtttgggaatgatgccgatacttactatgacagacttttggctggtgaaagtgggatttcgcttattgatcgttttgatgcttctaaatttcctacgagatttgggggacaaattcgtgggtttacatctgaagggtatattgatgggaagaatgataggaggcttgatgattgtttaaggtatgccattgttgctggcaagaaagctttggaaaatgcagatcttggtggtgatagattagaaaagattgataaagagagagcaggtgttcttgtaggaacaggaatgggtggtcttacagttttctcagatggtgtacaaaacctaattgaaaagggtcacaggaaaattactccattttttgtaccatatgccataacaaacatgggttctgctttgcttggtattgatcttggttttatgggaccaaactactcaatctcaactgcttgtgctacctccaattactgtttttatgctgccgctaatcacatccgtagaggtgaagcggatttgatgcttgctggtggaactgaagctgccataatacctattggtttaggaggttttgtggcatgcagagctttgtctcaaagaaatgatgatccacaaactgcttccaggccgtgggacaaagaaagagatggatttgttatgggagagggggctggaatcttggtgatggaaagtttggagcatgcaatgaaacgaggagcgccaataattgcagagtatttgggtggtgcagttaattgtgatgcttatcacatgactgatccccgagctgatggtcttggagtttcttcatgtattcttagcagccttgaagatgctggagtgtcaccagaagaggttaactacattaatgctcatgcaacctctaccattgttggtgatctagccgaaataaatgctgttaagaaggttttcaagaccacgacaggaatcaaaatgaatgcaaccaagtctatgatagggcattgcctcggtgctgctggtggtctggaagctattgcaacaattaaagctattacaaccggctgggtgcatccttcaattaaccaattcaatcctgagccttcagtggaatttgatactgttccaaacaaaaaacagcagcatgaagtgaatgttgctatctccaattcctttggttttggtggtcacaactctgtcgttgccttttctgcattcaagccttaattcagctcagtttaggtagagcaatcttctggagtaatataggggattaatgtgatacacagtggctgtttcatctccgtgtgggcaacttgctgggcgcagcgagagaggaacaagtgtcaattctttttatgtactaataatctttagcttgtagttttatagcaatgaacattttcacttttcattccttaaattagcttggaccttcatagtttggttaaacaacaatgccatcagttttgaattatgcaagagatttgaaagatgatatgatcttttgagattaacgactctctgatggcacctgttttcgaaaaaaatatttagttaacctgtaagctgtataaacagccatatgcacaactatagtcgtcgctactaaattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="62754" stop="57837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62454" g_stop="61834" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61833" i_stop="61310" i_length="524">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61309" g_stop="60878" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="1053" r_length="432" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60877" i_stop="60630" i_length="248">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60629" g_stop="60456" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1054" r_stop="1227" r_length="174" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60455" i_stop="59238" i_length="1218">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59237" g_stop="59124" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1228" r_stop="1341" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59123" i_stop="59034" i_length="90">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59033" g_stop="58932" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1342" r_stop="1443" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58931" i_stop="58847" i_length="85">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="58846" g_stop="58780" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1444" r_stop="1510" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="58779" i_stop="58673" i_length="107">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="58672" g_stop="58296" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1511" r_stop="1887" r_length="377" r_score="0.973"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="58295" i_stop="58222" i_length="74">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="58221" g_stop="58139" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1888" r_stop="1968" r_length="81" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U578896" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1970</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62454" e_stop="61834"/>
          <exon e_start="61309" e_stop="60878"/>
          <exon e_start="60629" e_stop="60456"/>
          <exon e_start="59237" e_stop="59124"/>
          <exon e_start="59033" e_stop="58932"/>
          <exon e_start="58846" e_stop="58780"/>
          <exon e_start="58672" e_stop="58296"/>
          <exon e_start="58221" e_stop="58139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTGGTTTCTCTCTTTCTGTACAAGCACAAAACACACACTCCCTTTCTCTCTCTAAAAATAGTAGTAATACACTCGCATCGTTAACATCGAAAAGCTTTTTGCTGCTGCTTCTTCTTCTTCTTCTTGCTCCGCCACCTCAAATCTGAAAACCCATTTCAGTTAACAATGGAAGCAATCCAATCTCTATCATTTCGTCCGTCTCCACTCGAACCTCTACGAAAAAACATCCCCCAGTTCACCAATGTGAGGTCATTGGGTGCTAAAAGAGTGCCTTTAACAGTAACAGCTTCTGCATCTACTGTTTCTGCTCCAAAAAGAGAGAAAGACCCAAAGAAAAGGGTTGTTATAACTGGGACGGGTCTTGTTTCTGTGTTTGGGAATGATGCCGATACTTACTATGACAGACTTTTGGCTGGTGAAAGTGGGATTTCGCTTATTGATCGTTTTGATGCTTCTAAATTTCCTACGAGATTTGGGGGACAAATTCGTGGGTTTACATCTGAAGGGTATATTGATGGGAAGAATGATAGGAGGCTTGATGATTGTTTAAGGTATGCCATTGTTGCTGGCAAGAAAGCTTTGGAAAATGCAGATCTTGGTGGTGATAGATTAGAAAAGGTTCGGCTTTTTTTTCGTTCTTTTGATATTTCAATTTGGTTATATCTGTCAAGATTTTCGGGGTTTTTTTGAGGTATGATGAATTTGCTGTAATGGGGCTTGCATGATGTGCTTTTGGCTGGTGTTGATTTGGTCGTTTCTTTTATTTTATTTGGAGATGTGGAGAATTTGGAGAAAATTGCTAGCTGATTGTGTTTATTTTGGTTTTTTAGCTGGTTTATGCCATTTATTGCTTGTATTTCATTTCTATTATCACCAAAATGCTGGAATTGGGCTTTCATGATGTCTTAGAGACCATAATTGTGTAAAAGTCTGAATCCTGCCAGTTGCCAGTGCATCGTGGAATACCAGAAACAATCAAAACTACTGTTCCTCGGAAAACAAATTTGTCATTAGTGCTTTTGAAAAGCTTTGATGTGAATAATTAGCATAGCTACTTGTTCAGCCTCCATTGTTTATCTGGATTTGTTTTTTATCTTCTGCAGTACATGACTCTAGGTTGTTAATTTATGTTCTTCCTGCAGATTGATAAAGAGAGAGCAGGTGTTCTTGTAGGAACAGGAATGGGTGGTCTTACAGTTTTCTCAGATGGTGTACAAAACCTAATTGAAAAGGGTCACAGGAAAATTACTCCATTTTTTGTACCATATGCCATAACAAACATGGGTTCTGCTTTGCTTGGTATTGATCTTGGTTTTATGGGACCAAACTACTCAATCTCAACTGCTTGTGCTACCTCCAATTACTGTTTTTATGCTGCCGCTAATCACATCCGTAGAGGTGAAGCGGATTTGATGCTTGCTGGTGGAACTGAAGCTGCCATAATACCTATTGGTTTAGGAGGTTTTGTGGCATGCAGAGCTTTGTCTCAAAGAAATGATGATCCACAAACTGCTTCCAGGCCGTGGGACAAAGAAAGAGATGGATTTGTTATGGGAGAGGGGGCTGGAATCTTGGTAAGCTTCCTAGCGATTATCATATTTTGGTCATAGGAAGTACATCTAAGCTACTTTGAGCAAGTTATGTGTGGTCCAATCCCGAAGCAACTAAATATGCAATAAACTGCTATCCATGAATTGCTGGTCTTTCTTTCATTGCACGTAGACTGCATAATTAGATTAAGCACTAGAGATTTCTGTCACTTTAATACAATCTATTCACCGTTTGGAAAGTTATTATGAAAATTGAATGACATTCTTGGCAGGTGATGGAAAGTTTGGAGCATGCAATGAAACGAGGAGCGCCAATAATTGCAGAGTATTTGGGTGGTGCAGTTAATTGTGATGCTTATCACATGACCGATCCCCGAGCTGATGGTCTTGGTGTTTCTTCATGTATTCTTAGCAGCCTTGAAGATGCTGGAGTGTCACCAGAAGAGGTATTTACTTCCCTCTCCAAGCAGTTGAGGTTATACTCATTGTCTACACTCTACTCAATAGTTAAAGAGCGGGGTAAAAGAAATACTGGAAATAGCAAATCACTCTAGATGTTTTCCGTTAAAAAATTGGAAACTTGTCAAAATGTTATCTTGGGGCTACCAAACCCAAGATCCGTCATATCTCATACTTTTGCTTCTCAGAATTCTTCTTTGATTGGGGAAATGGGGAAAGGTTACAGTGAATATACTTAACTATTGACATGAAATAGATTTCTTTTCATGGTGCATTGGCCTTGTTGTAGCCTTGTAGGACATTTCTGTGTGTTTTTGTTTTAGGCTGAATGGAAGATATTGTGCAACGAGTGAACCTTCATTCCTTAATAATAAAAAAAAAATTACTTGTGACATTATAGTCTTTCCATGTCAATTTTATGCCCATAGACTCTCATCCATGTCCCATTGCCTCTTAAAGAAAAAAATGCTACCTCCCATGTTAGCTTTATTCTAAATTTTAGATTCCAAGTAAAGATTACTCCCTCTCTCTTTAGTAGATAAAGACATCCCCTTATTGAGAGTAAACAAAAGGTTACTATTCAATTTTAATCATCAAAGACACATGTTAAAACTGCTGGCGATCAGAAAAAATTGGATTCTTTCACCATTAATAAAATGCACCTAAAATGCTTGTACAGTTCATCCTAGATACTAAGCCCTATCACTGGAGCTTTAGTGTCTTCTTCTCAGATCTGATTTTAACAATACCAACCTTCTCACCTTGTTGCATCGAAAGAAGTAACACAGACTTTGCTTTGAACCACTATGCCCTAAGCTACAGCAATTGTCTAGAGTCAGCATGATATCTGTTGATGAATTAATAGTCACATTCACATTTCAATAGAACCATAGAATTGTCCTTTCAGTAATCCTATTTAAGATGTTCAAGCAGAATGACATATGGAGAATTCATATGGCTGGTAGCCACTAGTTGGGATCGACCTTCTTTGTTGTTGTTGATGATCAAACAGCTGAAAGTGAAACTGTCTCTTTATTTTGATCATCCAGAACTTTAGAACCTAGTTTGGTGGGTACTCGAAACATTTAGCTTTTGATAATGTGGTATAGTCTTTGGTAAGAGGTACAGATATGTATTGGCTAGATTTTGCTAAAAGTTGAAGTTGAATTTGATTACTGAATTGATCTTCTCTTTTTCCTTTGTAGGTTAACTACATTAATGCTCATGCAACTTCTACCATTGTTGGTGATCTAGCCGAAATAAATGCTGTTAAGAAGGTTTTCAAGACCACTACAGGAATCAAAATGAATGCAACCAAGGTAATTATGTCTACATTGTATTGCATCTCTTCATTTATTCGAATTTATCAGTGTATGTTCATCATTAAGTGTTTCCCCATATTGTTCCAGTCTATGATAGGGCATTGCCTCGGTGCTGCTGGTGGTCTGGAAGCTATTGCAACAATTAAAGCTATTACAACCGGCTGGGTGCATCCTTCAATTAACCAATTCGTGAGTTGTCCTATATTTTCAAACAAATGTCAATTGCTATGCTCATTCTTCATTTGCAAATCTCTAATTGTAATGAATATTGCAGAATCCTGAGCCTTCAGTGGAATTTGATACTGTTCCAAACAAAAAACAGCAGCATGAAGTGAATGTTGGTAAGATACACTTCAAATTATAGCACCATATTATATTTTCAAAAATTAAGCATTCTCATGAATAATTGAAAAACTTCCAACATAACATCAATTTCTTACATATGCAGCTATCTCCAATTCCTTTGGTTTTGGTGGCCACAACTCTGTCGTTGCCTTTTCTGCATTCAAGCCTTAATTCAGCTCAGTTTAGGTAGAGCAATCTTCTGGAGTAGTACAGGGGGTTAATGTGATACACATTGTCTGTTTCATCTCCGTGTGGGAAACTTGCTGGGCGCAGCGAGAGAGGAACAATTGTCCATTCTTTTTATGTACTAATAATCTTTAGCTTGTAGTTTTATAGCAATGAACATTTTCACTTTTCATTCCTTAAATTAGCTTGGACCTTCATAGTTTGGTTAAACAACAATGCCATCAGTTTTGAATTATGCAAGAGATTTGAAAGATGATATGATCTTTTGAGATTAACAACTCTCTGATGGCACCTGTTTAATTTTCCATTTGAGTCGACAATTGGTTCGAGAACATTTGTTGAACAACATATGCGTGGGTAGAAAAACTGTTTTCGAAAAAAAAATATCTAGTTAACCTGTAAGCTGTATAAACAGCCATATTCACAACTATACTCGTCGCTACTAAATTAA</genome_strand>
        <mrna_strand>GCCTTGGTTTCTCTCTTTCTGTACAAGCACAAAACACACACTCCCTTTCTCTCTCTAAAAATAGTAGTAATACACTCGCATCGTTAACATCGAAAAGCTTTTTGCTGCTGCTTCTTCTTCTTCTTCTTGCTCCGCCACCTCAAATCTGAAAACCCATTTCAGTTAACAATGGAAGCAATCCAATCTCTATCATTTCGTCCGTCTCCACTCGAACCTCTACGAAAAAACATCCCCCAGTTCACCAATGTGAGGTCATTGGGTGCTAAAAGAGTGCCTTTAACAGTAACAGCTTCTGCATCTACTGTTTCTGCTCCAAAAAGAGAGAAAGACCCAAAGAAAAGGGTTGTTATAACTGGGACGGGTCTTGTTTCTGTGTTTGGGAATGATGCCGATACTTACTATGACAGACTTTTGGCTGGTGAAAGTGGGATTTCGCTTATTGATCGTTTTGATGCTTCTAAATTTCCTACGAGATTTGGGGGACAAATTCGTGGGTTTACATCTGAAGGGTATATTGATGGGAAGAATGATAGGAGGCTTGATGATTGTTTAAGGTATGCCATTGTTGCTGGCAAGAAAGCTTTGGAAAATGCAGATCTTGGTGGTGATAGATTAGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATAAAGAGAGAGCAGGTGTTCTTGTAGGAACAGGAATGGGTGGTCTTACAGTTTTCTCAGATGGTGTACAAAACCTAATTGAAAAGGGTCACAGGAAAATTACTCCATTTTTTGTACCATATGCCATAACAAACATGGGTTCTGCTTTGCTTGGTATTGATCTTGGTTTTATGGGACCAAACTACTCAATCTCAACTGCTTGTGCTACCTCCAATTACTGTTTTTATGCTGCCGCTAATCACATCCGTAGAGGTGAAGCGGATTTGATGCTTGCTGGTGGAACTGAAGCTGCCATAATACCTATTGGTTTAGGAGGTTTTGTGGCATGCAGAGCTTTGTCTCAAAGAAATGATGATCCACAAACTGCTTCCAGGCCGTGGGACAAAGAAAGAGATGGATTTGTTATGGGAGAGGGGGCTGGAATCTTG........................................................................................................................................................................................................................................................GTGATGGAAAGTTTGGAGCATGCAATGAAACGAGGAGCGCCAATAATTGCAGAGTATTTGGGTGGTGCAGTTAATTGTGATGCTTATCACATGACTGATCCCCGAGCTGATGGTCTTGGAGTTTCTTCATGTATTCTTAGCAGCCTTGAAGATGCTGGAGTGTCACCAGAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAACTACATTAATGCTCATGCAACCTCTACCATTGTTGGTGATCTAGCCGAAATAAATGCTGTTAAGAAGGTTTTCAAGACCACGACAGGAATCAAAATGAATGCAACCAAG..........................................................................................TCTATGATAGGGCATTGCCTCGGTGCTGCTGGTGGTCTGGAAGCTATTGCAACAATTAAAGCTATTACAACCGGCTGGGTGCATCCTTCAATTAACCAATTC.....................................................................................AATCCTGAGCCTTCAGTGGAATTTGATACTGTTCCAAACAAAAAACAGCAGCATGAAGTGAATGTTG...........................................................................................................CTATCTCCAATTCCTTTGGTTTTGGTGGTCACAACTCTGTCGTTGCCTTTTCTGCATTCAAGCCTTAATTCAGCTCAGTTTAGGTAGAGCAATCTTCTGGAGTAATATAGGGGATTAATGTGATACACAGTGGCTGTTTCATCTCCGTGTGGGCAACTTGCTGGGCGCAGCGAGAGAGGAACAAGTGTCAATTCTTTTTATGTACTAATAATCTTTAGCTTGTAGTTTTATAGCAATGAACATTTTCACTTTTCATTCCTTAAATTAGCTTGGACCTTCATAGTTTGGTTAAACAACAATGCCATCAGTTTTGAATTATGCAAGAGATTTGAAAGATGATATGATCTTTTGAGATTAACGACTCTCTGATGGCACCT..........................................................................GTTTTCG--AAAAAAATATTTAGTTAACCTGTAAGCTGTATAAACAGCCATATGCACAACTATAGTCGTCGCTACTAAATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593563" ref_strand="-" ref_description="SGN-U593563 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|74475410|gb|ABA07910.1| (e_value=9e-15) plastid; (*ATH) AT5G46290.1 (e_value=1e-14)  Symbol: None | 3-oxoacyl-(acyl-carrier-protein) synthase I, identical to Swiss-Prot:P52410 3-oxoacyl-(acyl-carrier-protein) synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (Arabidopsis thaliana) | chr5:18791313... ; (*SWP) sp|P52410|KASC1_ARATH (e_value=8e-14) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1; ">
      <seq>aatccggagccttcagtggaatttgaaattgttccaaacaaaaaacagcagcatgaagtgaatgttgctatctccaattcctttggttttgggggccacaaatcggtggtggcctttttggcattcaagccttaattcagctcagtttaggtagagcaatcttttggagtagtacaggggattaatgtgaaacccattgtttgtttcatccccgtgtgggaaacttgctgggcgcagcgaaaaaggaacaattgtccattctttttagggacaaaaaatctttagctgggagttttaaagcaatgaacattttcccttttcattccttaaattagctgggcccttcatagtttggttaaacaacaatgccatcagttttgaattatgcaagagatttgaaaaatgatatgatcttttgagattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="59146" stop="58017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58846" g_stop="58780" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58779" i_stop="58673" i_length="107">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.934" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58672" g_stop="58316" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="424" r_length="357" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U593563" ref_strand="-">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593563" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="58846" e_stop="58780"/>
          <exon e_start="58672" e_stop="58316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCTGAGCCTTCAGTGGAATTTGATACTGTTCCAAACAAAAAACAGCAGCATGAAGTGAATGTTGGTAAGATACACTTCAAATTATAGCACCATATTATATTTTCAAAAATTAAGCATTCTCATGAATAATTGAAAAACTTCCAACATAACATCAATTTCTTACATATGCAGCTATCTCCAATTCCTTTGGTTTTGGTGGCCACAACTCTGTCGTTGCCTTTTCTGCATTCAAGCCTTAATTCAGCTCAGTTTAGGTAGAGCAATCTTCTGGAGTAGTACAGGGGGTTAATGTGATACACATTGTCTGTTTCATCTCCGTGTGGGAAACTTGCTGGGCGCAGCGAGAGAGGAACAATTGTCCATTCTTTTTATGTACTAATAATCTTTAGCTTGTAGTTTTATAGCAATGAACATTTTCACTTTTCATTCCTTAAATTAGCTTGGACCTTCATAGTTTGGTTAAACAACAATGCCATCAGTTTTGAATTATGCAAGAGATTTGAAAGATGATATGATCTTTTGAGATTA</genome_strand>
        <mrna_strand>AATCCGGAGCCTTCAGTGGAATTTGAAATTGTTCCAAACAAAAAACAGCAGCATGAAGTGAATGTTG...........................................................................................................CTATCTCCAATTCCTTTGGTTTTGGGGGCCACAAATCGGTGGTGGCCTTTTTGGCATTCAAGCCTTAATTCAGCTCAGTTTAGGTAGAGCAATCTTTTGGAGTAGTACAGGGGATTAATGTGAAACCCATTGTTTGTTTCATCCCCGTGTGGGAAACTTGCTGGGCGCAGCGAAAAAGGAACAATTGTCCATTCTTTTTAGGGACAAAAAATCTTTAGCTGGGAGTTTTAAAGCAATGAACATTTTCCCTTTTCATTCCTTAAATTAGCTGGGCCCTTCATAGTTTGGTTAAACAACAATGCCATCAGTTTTGAATTATGCAAGAGATTTGAAAAATGATATGATCTTTTGAGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598030" ref_strand="+" ref_description="SGN-U598030 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tttctgtgtgtgttttgttttaggctgaacggaagatattgtgcaacgagtgaaccttcattccttaatagttaaaaaaaaatacttgtgacattatagtcttttccatgtcaattttatgcccatagactctctcatccatgtcccattgcctctttgagaaaaaaatgctaccttccatgttagctttattctaatttcagattccaagtaaagattactccctctctctttactagataaagacatccccttattgagagtaaacgaaaggttactattcaattttaatcatcaaagacacatgttaaaactgctggtgatcagaaaaaattggattctttcaccattaataaaaatgcacctaaaatgcttgtacaattcatcctagatgctaagccccctcactggagctttagtgtcttcttctcagatctgattttaacaataccaaccttctcaccttgttgcgtcgaaagaagtaacacagactttactttgaaccactatgccctaagctacagcaattgtctagaatcagcatgatatctgttgatgaattaatagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="60441" stop="59277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60141" g_stop="59577" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U598030" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60141" e_stop="59577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTGTGTGT-TTTTGTTTTAGGCTGAATGGAAGATATTGTGCAACGAGTGAACCTTCATTCCTTAATAATAAAAAAAAAATTACTTGTGACATTATAGTC-TTTCCATGTCAATTTTATGCCCATAGA--CTCTCATCCATGTCCCATTGCCTCTTAAAGAAAAAAATGCTACCTCCCATGTTAGCTTTATTCTAAATTTTAGATTCCAAGTAAAGATTACTCCCTCTCTCTTTAGTAGATAAAGACATCCCCTTATTGAGAGTAAACAAAAGGTTACTATTCAATTTTAATCATCAAAGACACATGTTAAAACTGCTGGCGATCAGAAAAAATTGGATTCTTTCACCATTAAT-AAAATGCACCTAAAATGCTTGTACAGTTCATCCTAGATACTAAGCCCTATCACTGGAGCTTTAGTGTCTTCTTCTCAGATCTGATTTTAACAATACCAACCTTCTCACCTTGTTGCATCGAAAGAAGTAACACAGACTTTGCTTTGAACCACTATGCCCTAAGCTACAGCAATTGTCTAGAGTCAGCATGATATCTGTTGATGAATTAATAGT</genome_strand>
        <mrna_strand>TTTCTGTGTGTGTTTTGTTTTAGGCTGAACGGAAGATATTGTGCAACGAGTGAACCTTCATTCCTTAATAGTTAAAAAAAAAT-ACTTGTGACATTATAGTCTTTTCCATGTCAATTTTATGCCCATAGACTCTCTCATCCATGTCCCATTGCCTCTTTGAGAAAAAAATGCTACCTTCCATGTTAGCTTTATTCT-AATTTCAGATTCCAAGTAAAGATTACTCCCTCTCTCTTTACTAGATAAAGACATCCCCTTATTGAGAGTAAACGAAAGGTTACTATTCAATTTTAATCATCAAAGACACATGTTAAAACTGCTGGTGATCAGAAAAAATTGGATTCTTTCACCATTAATAAAAATGCACCTAAAATGCTTGTACAATTCATCCTAGATGCTAAGCCCCCTCACTGGAGCTTTAGTGTCTTCTTCTCAGATCTGATTTTAACAATACCAACCTTCTCACCTTGTTGCGTCGAAAGAAGTAACACAGACTTTACTTTGAACCACTATGCCCTAAGCTACAGCAATTGTCTAGAATCAGCATGATATCTGTTGATGAATTAATAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591305" ref_strand="+" ref_description="SGN-U591305 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|294668|gb|AAA33873.1| (e_value=1e-35) beta-ketoacyl-ACP synthase; (*ATH) AT5G46290.1 (e_value=7e-36)  Symbol: None | 3-oxoacyl-(acyl-carrier-protein) synthase I, identical to Swiss-Prot:P52410 3-oxoacyl-(acyl-carrier-protein) synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (Arabidopsis thaliana) | chr5:18791313... ; (*SWP) sp|P52410|KASC1_ARATH (e_value=6e-35) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1; ">
      <seq>ctttctctctctaaaaatagtacgaatacactcgcatcgttaacatcgaaaagctttttgctgctgcttcttcttcttcttcttgctccgccacctcaaatctgaaaacccatttcagttaacaatggaagcaatccaatctgtatcatttcgtccgtctccactcgaacctctacgaaaaaacatcccccagctcaccaatgtgaggtcattgggtgctagaagagcgcctttaacagtaacagcttctgcatctactggttctgctccaaaaagagagaaagacccaaagaaaagggtcggtataactgggacgggtcttggttctgagtttgggaatgatgccgatacttactatgacagactctgggctggtgaaagtgggattgcgcttattgatcgccgtgatgctcttaaactgactacgagatgtgggggacaaattcgcgggtatacatctgaagggtgtattgatgggaagaatgataggaggctggatgattgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="62710" stop="61605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62410" g_stop="61905" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U591305" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62410" e_stop="61905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTCTCTCTAAAAATAGTAGTAATACACTCGCATCGTTAACATCGAAAAGCTTTTTGCTGCTGCTTCTTCTTCTTCTTCTTGCTCCGCCACCTCAAATCTGAAAACCCATTTCAGTTAACAATGGAAGCAATCCAATCTCTATCATTTCGTCCGTCTCCACTCGAACCTCTACGAAAAAACATCCCCCAGTTCACCAATGTGAGGTCATTGGGTGCTAAAAGAGTGCCTTTAACAGTAACAGCTTCTGCATCTACTGTTTCTGCTCCAAAAAGAGAGAAAGACCCAAAGAAAAGGGTTGTTATAACTGGGACGGGTCTTGTTTCTGTGTTTGGGAATGATGCCGATACTTACTATGACAGACTTTTGGCTGGTGAAAGTGGGATTTCGCTTATTGATCGTTTTGATGCTTCTAAATTTCCTACGAGATTTGGGGGACAAATTCGTGGGTTTACATCTGAAGGGTATATTGATGGGAAGAATGATAGGAGGCTTGATGATTGTT</genome_strand>
        <mrna_strand>CTTTCTCTCTCTAAAAATAGTACGAATACACTCGCATCGTTAACATCGAAAAGCTTTTTGCTGCTGCTTCTTCTTCTTCTTCTTGCTCCGCCACCTCAAATCTGAAAACCCATTTCAGTTAACAATGGAAGCAATCCAATCTGTATCATTTCGTCCGTCTCCACTCGAACCTCTACGAAAAAACATCCCCCAGCTCACCAATGTGAGGTCATTGGGTGCTAGAAGAGCGCCTTTAACAGTAACAGCTTCTGCATCTACTGGTTCTGCTCCAAAAAGAGAGAAAGACCCAAAGAAAAGGGTCGGTATAACTGGGACGGGTCTTGGTTCTGAGTTTGGGAATGATGCCGATACTTACTATGACAGACTCTGGGCTGGTGAAAGTGGGATTGCGCTTATTGATCGCCGTGATGCTCTTAAACTGACTACGAGATGTGGGGGACAAATTCGCGGGTATACATCTGAAGGGTGTATTGATGGGAAGAATGATAGGAGGCTGGATGATTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563442" ref_strand="+" ref_description="SGN-U563442 Tomato 200607#2 [56 ESTs aligned] (*GB) gi|115465477|ref|NP_001056338.1| (e_value=6e-89) Os05g0565400; (*SWP) sp|Q1XDB4|YCF23_PORYE (e_value=3e-38) Uncharacterized protein ycf23 OS=Porphyra yezoensis GN=ycf23; ">
      <seq>ggggggttttatcccttgcataaaatatccacagcttgtttaaagctgataactttcttatcccctcactccatagacaagaagaagaaaaagaagatgagcatctcactgtatacaccagtttctcccaaaaaccaattacaagtatttttgaaaccaaatcagaatccccttctactaggtgattctgttcttccaaaacgtgtttcatttgctagaagaaaatgtaccacaagggctctgctttcacattccaaagatgctgttttgaaagagtttcacgagaaaaaagcactaaagattatcgcaggattgcaaaatctggacaaagagaatgtggcttctgttgttactgctgcagataagggaggagcaacacatgtagatatagcttgtgaccctgagctggtgaaacttgctataagcctgacttcccttccggtttgtgtttcttctgtggatccttcagcatttccagctgctgtggaagcaggagccttgatggttgagatcggaaactatgactcgttctatgagaagggattggtgttctctcctgaacagattttgaacctaacgaaggagacaaagaagttacttccatcagtgatattatcagtcactgtgcctcacacgctaagccttcctgatcaggtcaagctggccgagcaattagaactggaaggtgttgacatcatccaaacagaaggaggaaaatgctctactccatcaaaggctggtattcttggattaatcgagaaggcaacaccaacactagcagctgcttattcgatttcaagggctgtcaatatccccgtcatgtgttcatctggattgagtgcagtcacagcaccaatggcaatcgtagctggagctgctggcgtgggtgttggctcagccatcaacaagctcaacgatcaggtagcaatgatcgcggaagtcaaatccatagctcattcattaggattgtcaaccaagaagcagaatttatttgaagggagcaatttgatagtgtaatccaatctaatgtagtagctcaaggcctgaagcaattaggaattattatgaaactaataaagtttttctattttttcttgcagtatcatttttttacattagttattataaattcataatacataaatatgtcatttaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="69533" stop="66285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69237" g_stop="68938" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68937" i_stop="68791" i_length="147">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68790" g_stop="68725" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="366" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68724" i_stop="68538" i_length="187">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68537" g_stop="68463" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="441" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68462" i_stop="67991" i_length="472">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67990" g_stop="67928" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="504" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67927" i_stop="67769" i_length="159">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.152" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67768" g_stop="67709" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="564" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67708" i_stop="67566" i_length="143">
            <donor d_prob="0.845" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67565" g_stop="67476" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="654" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="67475" i_stop="67395" i_length="81">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67394" g_stop="67287" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="762" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67286" i_stop="67092" i_length="195">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67091" g_stop="66969" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="763" r_stop="885" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="66968" i_stop="66858" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="66857" g_stop="66585" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="886" r_stop="1159" r_length="274" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U563442" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1158</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69237" e_stop="68938"/>
          <exon e_start="68790" e_stop="68725"/>
          <exon e_start="68537" e_stop="68463"/>
          <exon e_start="67990" e_stop="67928"/>
          <exon e_start="67768" e_stop="67709"/>
          <exon e_start="67565" e_stop="67476"/>
          <exon e_start="67394" e_stop="67287"/>
          <exon e_start="67091" e_stop="66969"/>
          <exon e_start="66857" e_stop="66585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGGTTTTATCCCTTGCATAAAATATCCACAGCTTGTTTAAAGCTGATAACTTTCTTATCCCCTCACTCCATAGACAAGAAGAAGAAAAAGAAGATGAGCATCTCACTGTATACACCAGTTTCTCCCAAAAACCAATTACAAGTATTTTTGAAACCAAATCAGAATCCCCTTCTACTAGGTGATTCTGTTTTTCCAAAACGTGTTTCATTTGCTAGAAGAAAATGTACCACAAGGGCTCTGCTTTCACATTCCAAAGATGCTGTTTTGAAAGAGTTTCACGAGAAAAAAGCACTAAAGGTATCATTTTAACTATCATTTTTTTTTTGCGAGTTCCATAGATAGATTGTTCCCTTTTTCCTAACAAGTTTTAATACATAGATGGTGAAGTTCAGGTAGGAAAAGAGAACAAGTTAAAATTACTAATGATTCATTCTTCTGCTTCAGATTATCGCAGGATTGCAAAATCTGGACAAAGAGAATGTGGCTTCTGTTGTTACTGCTGCAGATAAGGTTTAGTCTTCTGTGTTCTTTCACAATGATTTACAATTTCGCATTTTTCAAAAGAGAAAAAATAGGTTTTATGACTGTATGTTCTTATCAAGGGCTAAGTAGGAATTGTAATTGTTAGGATTCTGTGTTGTGGAGTTATTGAAATTTCAGTAAATGTACTAAGCCTGACTCTTTGATCTGCTTATAGGGAGGAGCAACACATGTAGATATAGCTTGTGACCCTGAGCTGGTGAAACTTGCTATAAGCCTGACTTCCCTTCCGGTAAATCCTGTCTGTCTAAATTTGTTCAGTTTTTTCCTTTAGCCCACATTATGCAACATTTGAACTGATCTATGGATGAGCTGTAACGTAATCAACTGATCTACTATTTCAACCTTCGCTGTGGATTTGTCCTTGGGCAACATTTAAATGATGGGACAACTTCTCAGGTCTAAATACGGTTCTTTTTGTGAAAATATTCATGACAAATGTGCCTTAAACTTTATCTTCTACTCCAGCCGCTGATTGCAATTTTCAGTTTCTCTGTTATTACTGAACATTCTGGTTGAATCATGTATATTTGTTGGTCCTTTCTACTTCCACAAATCATATGTTATCTGAGTTACATCTTCCTTGCAAGGAGTGCTTTGAGCTTGTCAGTTCAAAAATCTCACCATTTTAGGCATTTATGTCCTCAACCAGTATCTCTTTTAGTTGCATAGATTAGCTTAAATCTGGTGTCACATGCATGCAGGTTTGTGTTTCTTCTGTGGATCCTTCAGCATTTCCAGCTGCTGTGGAAGCAGGAGCCTTGATGGTACGACTTATTCTTATCATTTTTCCATTCCATTCATAAACACCATAAGCAAGACTATGAAATAGTTAAGCACCATGATTGCATAACATACAGTTCTGTTTCATTGAGAGGAGTAAGTTCCTTTTCGTAGCTCATCATAAAGTAAGTTATCTGGTGCAGGTTGAGATCGGAAACTATGACTCGTTCTATGAGAAGGGATTGGTGTTCTCTCCTGAACAGGTGTGTAGGATGACTTTTCCAGAGTTTCATAATGTCAAATAGATCAAAAGATTTGAGAACTAGCAACAATTATAGGAGTTTGATTTTGGTTATGAACCTGTGTGATGTCCATTACTTCTCACCGTGCTGATATTGCTTTTCAGATTTTGAACCTAACGAAGGAGACAAAGAAGTTACTTCCATCAGTGATATTATCAGTCACTGTGCCTCACACGCTAAGCCTTCCTGATCAGGTTTGAAAAAGCACTTTCCTATGACATGCTAAGTTCAAATGGAAGAAAAGTCACTTTTTTTTTGTCGTATCATATTGACAGGTCAAGCTGGCCGAGCAATTAGAACTGGAAGGTGTTGACATCATCCAAACAGAAGGAGGAAAATGCTCTACTCCATCAAAGGCTGGTATTCTTGGATTAATCGAGAAGGTAACACAACAGTGCAACACATTTGTAGTCTATACTACTAATAAGGATTAGCTATCTGTTGATAGTATGCTAGTTGAAAGTGAAAAAAGGCAAGGAATTGAGAAATTTGTGGGAACAATCAAGTTTTTCTTTCAATCCTCAGGGTTATGATGATTTCTTGTATTAACTTCATTTTGATATTGTTCATTTACACAGGCAACACCAACACTAGCAGCTGCTTATTCGATTTCAAGGGCTGTCAATATCCCCGTCATGTGTTCATCTGGATTGAGTGCAGTCACAGCACCAATGGCAATCGTAGCTGGAGCTGCTGGCGTGGTAATGCCTTACTGACACTATCTTTAATCTTAGGGAACATTCTTCTTATATAGCAAAATACTTGAGGCATCTCAACCAAGTTATTGAAACTTGTGTGAATGTTGAACTCAGGGTGTTGGCTCAGCCATCAACAAGCTCAACGATCAGGTAGCAATGATCGCGGAAGTCAAATCCATAGCTCATTCATTAGGATTGTCAACCAAGAAGCAGAATTTATTTGAAGGGAGCAATTTGATAGTGTAATCCAATCTAATGTAGTAGCTCAAGGCCTGAAGCAATTAGGAATTATTATGAAACTAATAAAGTTTTTCTATTTTTTCTTGCAGTATCA-TTTTTTACATTAGTTATTATAAATTCATAATACATAAATATGTCATTTAACTT</genome_strand>
        <mrna_strand>GGGGGGTTTTATCCCTTGCATAAAATATCCACAGCTTGTTTAAAGCTGATAACTTTCTTATCCCCTCACTCCATAGACAAGAAGAAGAAAAAGAAGATGAGCATCTCACTGTATACACCAGTTTCTCCCAAAAACCAATTACAAGTATTTTTGAAACCAAATCAGAATCCCCTTCTACTAGGTGATTCTGTTCTTCCAAAACGTGTTTCATTTGCTAGAAGAAAATGTACCACAAGGGCTCTGCTTTCACATTCCAAAGATGCTGTTTTGAAAGAGTTTCACGAGAAAAAAGCACTAAAG...................................................................................................................................................ATTATCGCAGGATTGCAAAATCTGGACAAAGAGAATGTGGCTTCTGTTGTTACTGCTGCAGATAAG...........................................................................................................................................................................................GGAGGAGCAACACATGTAGATATAGCTTGTGACCCTGAGCTGGTGAAACTTGCTATAAGCCTGACTTCCCTTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTTTCTTCTGTGGATCCTTCAGCATTTCCAGCTGCTGTGGAAGCAGGAGCCTTGATG...............................................................................................................................................................GTTGAGATCGGAAACTATGACTCGTTCTATGAGAAGGGATTGGTGTTCTCTCCTGAACAG...............................................................................................................................................ATTTTGAACCTAACGAAGGAGACAAAGAAGTTACTTCCATCAGTGATATTATCAGTCACTGTGCCTCACACGCTAAGCCTTCCTGATCAG.................................................................................GTCAAGCTGGCCGAGCAATTAGAACTGGAAGGTGTTGACATCATCCAAACAGAAGGAGGAAAATGCTCTACTCCATCAAAGGCTGGTATTCTTGGATTAATCGAGAAG...................................................................................................................................................................................................GCAACACCAACACTAGCAGCTGCTTATTCGATTTCAAGGGCTGTCAATATCCCCGTCATGTGTTCATCTGGATTGAGTGCAGTCACAGCACCAATGGCAATCGTAGCTGGAGCTGCTGGCGTG...............................................................................................................GGTGTTGGCTCAGCCATCAACAAGCTCAACGATCAGGTAGCAATGATCGCGGAAGTCAAATCCATAGCTCATTCATTAGGATTGTCAACCAAGAAGCAGAATTTATTTGAAGGGAGCAATTTGATAGTGTAATCCAATCTAATGTAGTAGCTCAAGGCCTGAAGCAATTAGGAATTATTATGAAACTAATAAAGTTTTTCTATTTTTTCTTGCAGTATCATTTTTTTACATTAGTTATTATAAATTCATAATACATAAATATGTCATTTAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571174" ref_strand="+" ref_description="SGN-U571174 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345404|emb|CAO14702.1| (e_value=2e-80) unnamed; (*ATH) AT5G40480.1 (e_value=1e-59) | Symbol: EMB3012 | expressed protein, ; expression supported by MPSS | chr5:16230589-16241210 FORWARD | Aliases: K21I16.30, K21I16_30, EMB3012, EMBRYO DEFECTIVE 3012; ">
      <seq>ggttgatccaccttatgttggttatgtgaagccgtgggttgatcttgatacgggtaattcatattgccttttcttcccttactctcctgaaagtttggtacttgccactccaaagtcaggaggcattaaacaggatttagctgttactattaaggcatcactgatcggagagcagaatatctcaggatctgcatcagcactttttgttggaggtttcatcattccgggaacggaaggagattcattgcagttaaatctaaccccacaatttaacaggagtgtcctcactgttgtaggaaatacagatgtgagtatctactggcatgatcgggaacgactagctgtcagacccatacatggagaagattctcaaggaagaagccgtgcacagtatgagatcaaaattcgcagagcagagaagtttaaagacaaactgatttttacactcccagcaactggtcagatcacggaagttaatgttaactatgaacctgaagagagaagagcaacaattgttaaccttaatctatgggctactgcagctgcttgtttcatcttgcttatagtcacagccactgtattcatttcttacttggatcaacctgtgagatcccgaccatctgctcctcctggcacaccaagtgtagctgcacctgtaactcctgagcgaagcagtcctgctggagtaagcgaacattcacctcggacacctcaacctttcttggattatgttaggaggacaattgatgaaactccatactacagacaagactttaggaggagggctaaccctcagaacacttactagcatattgtggggccaattcacctcttccctactcccccttttgcctttgctagatatgccaaatggtttctcaggtaattgccaaaggtcttgaatctggctgcaaactttacaatgatagtgttgtagttttgttggtgtaattttgtgtagagtattgcaagctgtgtgtcattggatactttctagagaagcagcctcatctgccaaaaaattcttatgtcctgctttctgctggaaaaggcaatacaacagcactttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="71473" stop="69802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71173" g_stop="70102" g_length="1072"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1072" r_length="1072" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U571174" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1072</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71173" e_stop="70102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGATCCACCTTATGTTGGTTATGTGAAGCCGTGGGTTGATCTTGATACGGGTAATTCATATTGCCTTTTCTTCCCTTACTCTCCTGAAAGTTTGGTACTTGCCACTCCAAAGTCAGGAGGCATTAAACAGGATTTAGCTGTTACTATTAAGGCATCACTGATCGGAGAGCAGAATATCTCAGGATCTGCATCAGCACTTTTTGTTGGAGGTTTCATCATTCCGGGAACGGAAGGAGATTCATTGCAGTTAAATCTAACCCCACAATTTAACAGGAGTGTCCTCACTGTTGTAGGAAACACAGATGTGAGTATCTACTGGCATGATCGGGAACGACTAGCTGTCAGACCCATACATGGAGAAGATTCTCAAGGAAGAAGCCGTGCACAGTATGAGATCAAAATTCGCAGAGCAGAGAAGTTTAAAGACAAACTGATTTTTACACTCCCAGCAACTGGTCAGATCACGGAAGTTAATGTTAACTATGAACCTGAAGAGAGAAGAGCAACAATTATTAACCTTAATTTATGGGCTACTGCAGCTGCTTGTTTCATCTTGCTTATAGTCACAGCCACTGTATTCATTTCTTACTTGGATCAACCTGTGAGATCCCGACCATCTGCTCCTCCTGGCACACCAAGTGTAGCTGCACCTGTAACTCCTGAGCGAAGCAGTCCTGCTGGAGTAAGCGAACATTCACCTCGGACACCTCAACCTTTCTTGGATTATGTTAGGAGGACAATTGATGAAACTCCATACTACAGACAAGACTTTAGGAGGAGGGCTAACCCTCAGAACACTTACTAGCATATTGTGGGGCCAATTCACCTCTTCCCTACTCCCCCTTTTGCCTTTGCTAGATATGCCAAATGGTTTCTCAGGTAATTGCCAAAGGTCTTGAATCTGGCTGCAAACTTTACAATGATAGTGTTGTAGTTTTGTTGGTGTAATTTTGTGTAGAGTATTGCAAGCTGTGTGTCATTGGATACTTTCTAGAGAAGCAGCCTCATCTGCCAAAAAATTCTTATGTCCTGCTTTCTGCTGGAAAAGGCAATACAACAGCACTTTCTA</genome_strand>
        <mrna_strand>GGTTGATCCACCTTATGTTGGTTATGTGAAGCCGTGGGTTGATCTTGATACGGGTAATTCATATTGCCTTTTCTTCCCTTACTCTCCTGAAAGTTTGGTACTTGCCACTCCAAAGTCAGGAGGCATTAAACAGGATTTAGCTGTTACTATTAAGGCATCACTGATCGGAGAGCAGAATATCTCAGGATCTGCATCAGCACTTTTTGTTGGAGGTTTCATCATTCCGGGAACGGAAGGAGATTCATTGCAGTTAAATCTAACCCCACAATTTAACAGGAGTGTCCTCACTGTTGTAGGAAATACAGATGTGAGTATCTACTGGCATGATCGGGAACGACTAGCTGTCAGACCCATACATGGAGAAGATTCTCAAGGAAGAAGCCGTGCACAGTATGAGATCAAAATTCGCAGAGCAGAGAAGTTTAAAGACAAACTGATTTTTACACTCCCAGCAACTGGTCAGATCACGGAAGTTAATGTTAACTATGAACCTGAAGAGAGAAGAGCAACAATTGTTAACCTTAATCTATGGGCTACTGCAGCTGCTTGTTTCATCTTGCTTATAGTCACAGCCACTGTATTCATTTCTTACTTGGATCAACCTGTGAGATCCCGACCATCTGCTCCTCCTGGCACACCAAGTGTAGCTGCACCTGTAACTCCTGAGCGAAGCAGTCCTGCTGGAGTAAGCGAACATTCACCTCGGACACCTCAACCTTTCTTGGATTATGTTAGGAGGACAATTGATGAAACTCCATACTACAGACAAGACTTTAGGAGGAGGGCTAACCCTCAGAACACTTACTAGCATATTGTGGGGCCAATTCACCTCTTCCCTACTCCCCCTTTTGCCTTTGCTAGATATGCCAAATGGTTTCTCAGGTAATTGCCAAAGGTCTTGAATCTGGCTGCAAACTTTACAATGATAGTGTTGTAGTTTTGTTGGTGTAATTTTGTGTAGAGTATTGCAAGCTGTGTGTCATTGGATACTTTCTAGAGAAGCAGCCTCATCTGCCAAAAAATTCTTATGTCCTGCTTTCTGCTGGAAAAGGCAATACAACAGCACTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584093" ref_strand="+" ref_description="SGN-U584093 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=3e-19) unnamed; ">
      <seq>gctaattttggacatggaactttgataaaccacctgtgcacgtgtatacagttatttaaataccttacctttatcttcttttattttttactttctgtgcatttcataaggatcttactgtccggcaagtaatagtatgaatcggtcattaactttattctcctgcaggttatttcctttattttttgttgacagttgttgctgcatgtaagggttggattttctggcgcactcctgtggctttgttgtaatgggtagctttcaccagaattcttttccttgctgcatttcttcttctcctttctttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatggattgggaggggaaggaaccctattgattcatctgttctggctcgggactggtattgttcttgaaaatgagcaaagtgagatctgaaagggcatcatcagaaatgtggaaggttgcaggcttggcagttgtttctgttctatgtttcactttaagtgagctgtcgccttattcacagatataccccttcttttcaactggcgtggacaggagataaatggtgtttgtacatctcttctcattgtttgtacatctcttctcatggttttatattattttataggtaccctttaaaacttgtgttccttactgaaagcttgatttgaaattctagacttcagtgggaacttctgctttctgcctgctaattggtgttaccaattgttgaagctacgagattctcctcaagcccaaccccttatacctaggagctactaactgtagttaattagatgaaaaaggctgaacatggtggaaggaaccaatttaataatcagaggttgctctgatgatgttattaagtgcattaatatcgtaaacattttgaggagttgcgagatgtctctctggatcctctttacagaagttgggagctatcgagtaaggacttaacataagagctggattgggacatattagatatttctttagaattcggggcatgactgagaggggactccagttaatttgttcaaccaagaatgcaagtagcgtgtacgtgttttgttggggggagctgatcttacaatgcagttctttcctacaaattagaattttattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="100728" stop="105482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101028" g_stop="101285" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101286" i_stop="101359" i_length="74">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101360" g_stop="101411" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="310" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101412" i_stop="102786" i_length="1375">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.382" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102787" g_stop="102882" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="406" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102883" i_stop="104117" i_length="1235">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104118" g_stop="104182" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="471" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104183" i_stop="104453" i_length="271">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104454" g_stop="104587" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="603" r_length="132" r_score="0.761"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104588" i_stop="104642" i_length="55">
            <donor d_prob="0.000" d_score="0.44"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104643" g_stop="105182" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="1142" r_length="539" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U584093" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>1145</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101028" e_stop="101285"/>
          <exon e_start="101360" e_stop="101411"/>
          <exon e_start="102787" e_stop="102882"/>
          <exon e_start="104118" e_stop="104182"/>
          <exon e_start="104454" e_stop="104587"/>
          <exon e_start="104643" e_stop="105182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAGGTATGTGCAAACCCACCCTGTTCTTTTTCAACTGAGGCTATTTTAACTAGGACTAATGAAGAACTATTTTGCAGCTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTGTATCCTTGAACGTGTGAAAGTTATTGCTCTGAATTTAACTATTTGCAAACTAATTAATGAGGGGAACTTTCAGTATGGTGAACTTCCCATTTTTTCTCCAGAGTCATCTTCATTCCAGAAAATAGCAGTACCTGTTAATTTAATCAGTAAGCTGCCAAAAATCAGCAGTTTGCAAGACACTGCTACTGAGCTTTAGAATGTGGTTGACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTATTTGCTAAGTTGCGCAGACTCTTCACTTCCAATGCCCCACCCGTGTCGGATTTCCCAAAAATCCACTACTTTTGGAGAAACCGACATGTACCCGTTGTCATTTTTGAAGTGTCTTAGCAACATAAGTTATTTGATCCTAGTGCTATTCAAAGACTATAGATTCTTCTGCTCTACACCAAAAGTTGTCACTTGTCATGTATCTCTTTTCTTTTAATATCCGATCAGTAGTGCACCATTCAGTACACTCCTTTATACCTTTGTGGGGTAGAGAAGCTGTTTTTAATAGACTCTCGGCTAAAAAAATGGGAAAAACAGTTTTTACAGAACAGGTTTGAAAAATACAAGAGCAAAAAGATCTACAATGGAACTATCAAAGAAAAGAAAAATATTGACAACAAAATATAAAAGATAAGCGAAGTAAAAGAAACAACAGCAGAGCTAAATTTTAAAGAAAAAGGTAATGATACAACAAGAATTATAGTACTGATAAGTAGAAGAAGGAGAAAATAAGGAACTTCTCCACTTGAATACCAGTTATTTTATTTTCAGTGGAATATATACCCGTGACATGCGCTTAACCCACATATCACGACATCACACACTTTGTGCTAACCTATAAGAACAATGTGTTTTTGTTCTATAATTTAGTATGTGGTGATAAACTATATTAAAATAAACACATCTGATTATCACTTGTTATTAAATTATTTCTGTTTAACTTGTGCTTATGAATTATAGCAAATTTTAGAGTGTGTTTTTTTTATTAAAATATTGTTTTCTAAAATTCTTTCAAAAAATCTGTGCGGCATATGTCTGCTTTGTGGCAAAATCCCTATTCAATTTGTGAATGGCTTTCATGGTTTGTTTGTTGTAGAAGAACATCTACGTAATCCTCATTGTGTATAACTGTTTGAGCTATTATATTCTGTTCCTGCCTGTCAAATTCAATAAAATTGTTAAATGTAGGAGTATTAATTTGCGTACCTATTTGGACTGGTTGTTGTACATCTTGTATAATATTTTGTTGCAGATTTTTAGGCACACGGTAACTCACTGTATTTCTCTTTTTCCATTTCGGTTCTTTAGTCATGCACTTGCTTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGGGTATGGACTAAGGCTCTTTGATTACCAATATCTATTTATTTGTTGTTCTTGCATATTCTGTAACCTATCTGATTTAGCAGTTGTTGGTACTTCGCATAGATTACTTTCAGCCTCACATATTCATTTTTAGCTGCAACCAGATTTTATAACACAATCTATTTGATTGTTGTTTTCACATATTCTTTCTTCAATCCATTTGATTTAGGAGTTGTTTGTTCTCTTTATAGATTACTTTGAGCCTCACATTCATTTTTAGCTGCAGTTAGATTTTAATGCACAAACAAGTATATACCTTCGACTTGGAGCCCTAACTGTTTCTTAGTATTTCCTGAGAGGAGCATCTCGTTGAAAGAGAGGGTGTGTTCCCCTGTGAGTAAGGGTAGTTCTTGTAAAATATTTTTCATGCTTAAATGAATACGTATGGTATTTTTAATTTGCTTACAATACTGGTTTTTGGTGTTTAAATTATTGTTGGGAAAATATAAATTTAGACTGTTTCATGGTGGTTTTTTTCTTTGCCACCTCTCCCCACCTTCCTCTTGATAATTGATGAAGTGCAGTTACATGATCCAGATTTATGTAGATCTTTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGTGGCATTTGCATGTTATGGTTAGTATGTTATACACTGGTATTTTTTATACCGCCTCCTCATCAATGTTCACACGTCACAGAGAATTGTTGTCCTGCCATTTTCAGTAATATAATCTTATCTATTGCTACTATGCACCATAAATCTTTACATGGGCACTTCAGTACTTGTGTAATAACTAACGTCTTTTGATCCACCATTTCTTCACAGAATCAGCTGATATAAAAGATTGAGTTATTTTATTTAACAAGGATAGACTTACAAATGTTCAAGAGTTCTCTCTCCCTCTATGTGTGTGTGTGTCCCCAGAGGTGGGTCAGGGGTGTGGAGAAGTGATTTCAAGGAATAGTTTAAACAATAAGATATTCATGGTTGATAGTTTTAGGCGGTGAAACTGCTGCCTCCCCAGAAAGACCAATATTTCATCAGTAATATCGCAGTCGAATGAATTGATTGTTCAACCAATTATCCATTTCTCGTCGAGCTGTGCAAAATTCTAAGTAACAGTTGTCGTAAAGAATTTGCTGTTTAAACTAGGTCTTTTGTGTTCTAATTATTTTATGTGAAGGTTTCCTATTTCAAAATCTATCTTTCTGACCATAATATCTCTGCTATGCAGGACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCTTCATCAGAAATGTGGAAGGTACTAACTCATCTTTCCTCGGTGCATCTCTAGCATTTTCTGTATGTCGATTGGAATTGTTATTTGCAGACTGCAGAAAACTTCTGTGGCATGTCATATCATGTCATACTGAGATCTTTTACAATTCTAGTCTTAAGAATTGAGCTTGAATAAAGTGCACTTTTCTTTCTCTTCTTTTCTTCCTTGTTAAAATTCAGCTCTCATGACACAGATTGTGATAGATTATTTTATTGTGAAGTTTGATTTTTTATTATATGTTTGTCCAATGAAGGTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCGTATGTCTTCTGCTGGTCTCATGAGATGTCTTTTGTTTTGACTGCATAAGTTTCTAAGAGATTATGCTTTTAATGCAGCTTCTTTTCAACTGGCGTGGACAGAAGATAAATGGTGTTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTTAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGTTGTTACCAATTGTTGAAGCTATGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTACATAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGTGAGATGTCTCTCTGGATCCTTTTTACAGAAGTTGGGAGCTATAGAGTAAGGACTTAACATAAGAGCTAGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</genome_strand>
        <mrna_strand>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAG..........................................................................CTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCATCATCAGAAATGTGGAAG...............................................................................................................................................................................................................................................................................GTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCCT-TCTTTTCAACTGGCGTGGACAGGAGATAAATGGTGTTTGTACAT-CTCTTCTCATTG.......................................................TTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTGAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGGTGTTACCAATTGTTGAAGCTACGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTA-TTAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGCGAGATGTCTCTCTGGATCCTCTTTACAGAAGTTGGGAGCTATCGAGTAAGGACTTAACATAAGAGCTGGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569563" ref_strand="+" ref_description="SGN-U569563 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gtttctagtcatgtgcatcatgatcttggctagggaatatgtagaaaatgcatgttctttcataagggctattcactgatcaaatgaaatgggaaaaagttgaagacaaagaaaacaaattatttatctcctcgcacattacactagggacgggaaatcatggtaggtgaagctatgtgtgtgagaatcattttagctgtccattaaatttttcgtaagatccacaaactcgccagaattgcagcttagcagttgaaagacaacttatacaaacattgttttttacctttcaccgaacatcaaaacccaaaagagaatatggaaggaagtgcagaatcaatgaagaactcaactttctgcactggaggtctttccactcatttattgattttcattatattacattctttggatttacaaacttgtaccaatgtgttctgagcattgtggatgcaggtctcaagggcgagccccatatgatcatctgatggaattgtacattgatcggtgattttcagctagaaacgagggattgacaatactaaaaatgagacgacttctcagttgagtggttggtgttgtggttgagtgatcgaagaaagctcaactcaacgggaaaataataccccatgtatctaagcaaggtaggttgctcagggtatacatgcctgcataacttggatttctgtatatatcaaacattgcaatgaactttccaaattttacagattcttttttgttgatataatgaggttttagatttttcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="105147" stop="106516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105447" g_stop="106216" g_length="770"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="770" r_length="770" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U569563" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105447" e_stop="106216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAACACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCGTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATTGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACAACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTGGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</genome_strand>
        <mrna_strand>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAAAACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCTTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATCGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACGACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTAGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584094" ref_strand="+" ref_description="SGN-U584094 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=1e-54) unnamed; (*ATH) AT3G59090.1 (e_value=4e-42) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>gcaaattcaaagaaaaagataccatcgaggctgcataaagagaaaaaaaagtaaggggaattaggagaatatcgttttggataccatttcattttcttttttacttcttcaagacttgtttgttgtaagtgttttgggtacatatatatgcatatatatatatatatatatatatatatatatatatatatacaagcttatcatcatattgtgtgtccacgtttttttctctgtattagaggggaaagggggtaagaaggattgaggcagtggatggttttttaaaaagtaaagaaaaagagtgagaagaacatgattgagtggagagaagggacttgttatcctaaggctttaatgggagtgaatgtgggtcttgcttctgtcgatgccgttattgcagttcttgcttttgctcagttaatgagaattcactctcggaatacacacaatggctggactcgtcagaaagtatttcacttgatgattggatcttcaaatttgggttatttcctttattttattttgacaattgttgccgcatgtaagggttggattttctggtcgcactcctgtggctttgtcgttatggctttccccaaaattcttttccttgcggcatttcttcttctcctttctttctgggttgatctttgtcatcagtcaaatgatgaagaagatgaagatgatgtatatagccctcgagaagctttgttggagaagaacaagccaaattcaaatgctgatagtcgccgaagatgctgctcttttcgtgctgtcaaagtgggaagccgccaaaaagttgtggttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="116377" stop="127379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116677" g_stop="117097" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117098" i_stop="121151" i_length="4054">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121152" g_stop="121202" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="468" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121203" i_stop="123275" i_length="2073">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123276" g_stop="123309" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="502" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123310" i_stop="124865" i_length="1556">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.541" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124866" g_stop="124952" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="589" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124953" i_stop="125023" i_length="71">
            <donor d_prob="0.873" d_score="0.98"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="125024" g_stop="125075" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="641" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="125076" i_stop="126272" i_length="1197">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="126273" g_stop="126441" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="810" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="126442" i_stop="127027" i_length="586">
            <donor d_prob="0.812" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="127028" g_stop="127079" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="862" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U584094" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116677" e_stop="117097"/>
          <exon e_start="121152" e_stop="121202"/>
          <exon e_start="123276" e_stop="123309"/>
          <exon e_start="124866" e_stop="124952"/>
          <exon e_start="125024" e_stop="125075"/>
          <exon e_start="126273" e_stop="126441"/>
          <exon e_start="127028" e_stop="127079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAGTATCGTTTTGGATACCATTTCATTTTCTTTTTTACTTACTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATACATATATACATATATATATATATATATATATATATATATATATATATAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAA-GGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAGGTACTCTTCTCTCCCCCCTGTTCTTCATTGTTTCAGAGGGTGTTGTTATATATGTGGAGTTTCTGCTAAAAATTCTGTATTGATTATTGGAATTTTTTGTGTTGGGTGTTCGTTTCTTGTTCCCAATTTGGGATTTTGGGAATGCATTCCAATTGGGATTTTTGAAGGGTTTTAATGGATTCTGAATGATAATCTTGTTTGTGATGGGCAATGGAAAGGTGCTGTTTCGGCTAGGTTTGTGATATTGATTGAAAAATTGAGTCCTTTTGCTAAATTTTCTTCCTGTGGCTTATTAGTTTCTGGTTTCTGTGTTGTCAATTCCGTTAATATGCTTGAATTCGAAGGAATGTAAGTTCATTTGTCACAATGGGGTTAAGTTTTTTGCTTTCTAATTTATCATGGGTTTATACAGACGCATTTTCTTGAGACAGTTTTCTGCCATTGTCATGCATAGTTTAATATAATAAGTAGTGTATCTCTTTGACAAGTTCTGCTGAATTTAGTAATTTAAAGTTGCAAAGATTCGATTCGAAGAGACCAAATGTAATCTTGTTCTGAATATGGATTTTCTGAAGCAGAAAGCTTATTTTTCACGGGGACTTTGCCATAGATCACTTGCATAGCGATTTTTACTATGATTTCTCTTCCTCTTCTCTGGGAGGAGTAGGATGCAGTTTTTCTGGGCCAAATTGTGATATGTTTTGTCATATAGGGCTTGCAGCAACATTTAGGGAGTTATCGAGAAGTGATTTTCACTGTTTTGAGGGACTTTACCAGTATTATGGCATTTATGGCCAATATGATTACCCATGGAGATTGCATTAAGTATATGATTATTATCTCCACATTCAATAGATTTTGCTGCATTTGGTGAAAATGGTTAGTTTCATTGTTACAATACCATCTAAGATACTAGCTAAATGTGGAACTTTTGAATCATTGGTATTCGTATACCCGCTCTGCATTTGTGTAGGTGAACATGATTTTTGATGTCCTTGAGAATGGGCTAAAATTGGGATTGTTCTTGAAGCAGACTACTGGGATTCAACCATGTGTTGTTTTTCTGTTAATGCTTATCAAATACCATATTAGTCCTACGCTTGCATATTATTTGATTAAAAATGGAATAAAAAACAATTTTATCTGAAATTATATTGTTAAATGATTCTCGGAGAATCAAGAAGATTGTGGGTACTAATTTTATTCATGACAAAGAGATCTTATATGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTATGCCTTCTGGGTCGAGATCGCCTGGTGCGGGTTACCTCTCCTATGTGGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTGTGCGCACCCAAAAGGGTAGTAGCTGCGGGTTTCCCTTGTAGTAAAAAAAAAAAAAGAAGAGAGATCTTATATTTCAATTTTGGACCAGAGATGATACGTGTAAAACTCTTCTTTCTCATTGAGAGTGCAAGATATCATTCCAAAGAATAGTTTGAAAGCTATTCAGAAAGTAGCCAATTTTTTAGAGCTAATGGCTCTTGTTTAAGGCAGGAGAGTACCTTGCTTTTCCTTTTGAGATATCCGGTACTCTAACAGAATTTTGTGATCCTTTTGTTCACTATCCAAATGCAGTTAAAGCAAAAACTTGGTACGTTGGGATAACCTTTAATTGAAAGCTAATATGGTGTAAGCATAACTCAGGGTATGGATCTTTTTTTCCCATCCATGTTGTTGTCAATGCTTCCTGAACTGCAAACCGAATCTCCAAATATCTTCCTTACTCCTCCTCCTTTAGGCATGACCTCTTTGAAGGTTTTTTTTTTCTTTTGATGAAGTAATTAGTTCTATTGCAGGCATCAAGTAGATGCATAATAGTTAGAAAAGCTTAGTAGCAAAAGGTCAGCTCTCCTTTACATTGTTAATTGAGAATCAGGGAGCGGACATGGTTCAGAAATCAGGGCAATCTAGAGGGGATAAATAAACCCAACTATACAAAAACATGAGGCAGTTAGCTTTTAAAGATTGGTAGGTAGTTGATTCCATCAAAGCATCTTCTATTCCTTTCGTTCCAGATACTCCAAAAAATGGCTGCAGGTATCTTTGAAGGTTAACTGACGTACCCCACTTCATATCCCAAGATCATGGTGGATGATGGTTAACTGCAGTGAGGAAGCATTCCCTTTTTCTAATTATTTTTTAAAAAGTCTACTTCTTAAGAAGAAAAAGACATTGCAGACCTGTATCAAAATATTTCATCACTGCTTGGTGCAGCTTTCTGCGACTTAGGTTGCAACTTTCTCCAGTTCTTCTTCTTCAAGCTCCAGCTATGCTGTGTTGCTGCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTACCATGCTGCTATGTTTTTTTTGCTGCTGCTTTCTTTTTTTCTCTTCTCTTGTTTCGGTCTTCTTCAGCTTTTATATTCTTTATTTGTTTCTCTTTTTTTTCTTCTTCAGTATGTTAATTTATTTGGATTTTGTTTATTTGTTGTCTTCTTCTTTTTTTTTCTTTCATGTGTTGCGTGTACTTCTTGTGTCTAATTTTAATTATTTTATTTCCATTTTCTTCTCATATTCATTTTATTCTCTTCTTTTTCAGTAGCTTTTTTTGAATTACAGTTGTTTTTTAATTTTTTGTTCTCTTAACAGCAATTTCAAATGGTATCATCTGAGCAAAATAGAGCCATCAATTTTTTCAATGGCATCATCCATTTATGTTTTGTTTTTTATTTTGCTTGTTCTATCAAGCATTTCTGGCTATCAACTTTCTAGTTTTAAAATTGAAAGATTTGCTTCTATATATTATTTCTGTTGATGTCTTTTTTGATTTAGTTATTTTACTCATATGTGCGAGGTTTATTTTATTTTTGAAATGGTGCTTCACTTCAATGAAGAGAGTGAAGGGAGCTTTTGTTGCTTTTTTGCGCTTCATGCTCTCAAAAACACTGCCTCCCAGCAAACTACTCTATAATTAGTCCAAGGGGAGGGCTAGATTGGTTTTCTTCTACAAGTATAAGTGTCTTCTCCTCATGTATCTTGATTGGTTCAAGATGGAAATCGTTAAGAGTCCCTTGATTATTTGTCCCACTTGAATAAAGAAATTGTTTCTTCGGCTTGGTAACTCTTAAAGGAGGTGTTTGACACATCCCTCGGCAGAAGATGTTACATATGCCTTGTTTTTGCATTGCTCAGTTGCAGCCGATATATGGAAGTATATTCCTGTCCTTTTGTCATTCAATGAGTTATGCCTCATGGTCATAGCATAAAAGCACATACATAAGTGGGGACAATAGAATGTAAGGGAACAATTAAAAAGTTTTGACAGACTGTTCCAGCTTTTATTTTATTTTTTGGTGCCTATGGCTGGAAAGAAATAGCAGAATATGCTTCTCAAGGAGCCTCTTCTCCTATTCATGCTTTGAAGTATGGATGTCTTGGGAACATTTTTTTCTGGAGTAACCATTATATTCTGAATAATTTTGACCAGCTTTTACACTTTGTTAGCTCCTTAGGCGGCATAAAGGAGGATCACTGTTTAATTTAGGTGCTTGCTTAATATGACTAGTTGCTAAGATTGAAAACCAGAGAGGCAGGGGGTGGGGGTTGTGGGAGAGTTTGATGTTGTCAATGAGTTATCAGCATTCAACTACAATCTAGGACCATTGTGAAGATGAGGAATGAATCGAGCAGAGTACTTTTTGACACCAACTGGGTGACTAACTGAAAAAGAGGAAACCTTAATCTAGCTCAATTCTAACCTTGGGATACTGAAGCAATCGAATGGCTGCAAACCAGTTTGGTGCTTCTGTTTAGGTTGCTGCTCGTGCCTTCCGTGGTTGCATAATATTGGTGCAACTCTATTAGAGTATATTCTTGTGCTGTTAATGACACTCACATTTCCAGTGTGGTAGTGATAATTTCTGGTTAAATAGATTGTGCCATCATATTTTTGTGCAACTAAACTTGCTTATCTATTTTTCCAGTTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAAGTAAGTATTTCATCCTCGATTCTCTTGCTGATTTTATTGGTATCTGAGCTGGATGAAAACATTCTGTCCCTCCTACTTTAAATTAAAGTACTTTCCCAAGGTTTAAGTAATTATTGAACAATGTGAAAGCAGGCCAATTTGCTGCCGACACTTTTTGCCTAGTTCCAATTATGAATAGCAAATATACTAATGAAGCATGTTGCTAGATGCTTATATGCGACCGACTTTCCCTTTGATACCGAAAGTTACTGTGATTTGGGTGTTGTTAATTCTCTTTGGGAATTGCACCGAGGGTGTGGCCTAACTGTCAATGAAGATGAAAACCATGGAACATAGAAGAGACAAAGACTCCTAAGTGAGTTCTTCCCATTTGCCTAAGCCTCAGAGGGTAAAGTTACCCTGTATTTGTGTTGGTGTGCGGTAGTCGAAGTGCTCGCAAACTGGTCTAAACACCACAATTACAATAATAGTAGTTTTCTTCGGCAACTAAGACTTAGGTATGCATGTTCATGTGTGTAATCATTTGTATCTTTACATTAACCATAAGTGACAAGGATAAAATCGTGGAGGAGGTGTGCGTATAGGGAGTATAGTTTGAGTAAATGACTGGTTATGTGAGCTCTATTACTGTTGGTACTTGGTATTATTTTATTTTATTTTTGCATACTTATTAGGAACACTTCCCTCATCTGTTTTCCTTCCAGCCAAGCTCCTCACTTATGTTGCCGGTTTACCTATTAAGAGTGTAGAAGAGAGGAGAATGTGAAAAGTCCCAGAACCCATGTTGATGATATTCAACTAAATACTCTTGTCTAAACCATTAGTATTATAATGTTCAAAACGCGTGCCTAGCATTTACGGTTCAGGTGACTTATCATCTCTTTTTAATAATATTAGATAATTCAGGTGACATAACAGTGGTCTTCAGAAGCGAAAATATACTTCAGATTCCTTTACAGTTGTGGTATTAAGTTGCTTCTTTCTCACTATTGCCATAGTAATGAGTAACGATCCTTATCCTCCGTTTCTACAACTTGATAACTATTACCTAAAATTTTCTTTTTTGATAACCATTGCCTAAATTACTGTTCATCATGTAGGTTTTCAAAATTTTAGTATTCATACCAGGTTAGTCTCCAATTTTTTCCATGTGATCTAGTTGTACTCTCTTAATGTATCTCTCTTCCCCTCTCAGTCCTCTGATGAGTACAAATCCAAACTTCAGGATATTAAACCCAGCCTAATTACTTGGCCATTATGGTATTAGTGGTTCATTTATGCTCACATCTAAATTCTTTGGTGTTAGAGATGAGGGGTGTCTATGCTCAGTTCTTGGTGCAAGATCAGTCTATTGATGATTGACCATGGAGGTTTTACGAGTGTGATAATGGTGATATTGAGCTCTGTAACAGTCAGGGTCATAGTAGTGATCGTCTTGTGGAGTTAACCGGTAAATGCTGGCCACTGCTACGTTCTACCATGTTAACTTCCAGCCAAGTGGTACAATGTGTAGTGCAGATTGGGTTGAATATTCTGGTGATGTTACTTCTTCAAAAGAACACAAATGCATCTTTGAATAGCTGAAATTAGTGAATATCGAGGAGTCTTGTTCTGCATGAAATGATCCAAGTATGGTGCAACAAGACGCTTCTTCCACTCATTTGAAGGCACTACCAAAAAACGAGAGTCAGTTTACCTCCTTGTTCTTCTAATACCTGACTGTGAAGTGGCGCATGCTTGATATACCAATTGGAAACGAAACTGGGCTAAACTTGATAATATCTACATAGACTAGCTCCGTGTAATAACAAATAAAAGACTTCATCAACTCTGAGGTAGCACTACATCTCTTGGAGGATATACACATATATTAGAATTTGGAAATATATTGCCTTAATTAGTTTAGTTTACTGCTATGAAGCGACAGTCATCAAGATTTTTCAATGATTCTTCTTCCTTTTGTCCTGGTTAGCCTTAAAAAAAATTCTTTAGTAGATTCAATGAGGCTTCCTTCTTGTTCACTTATGTGCTAATTACAAATCATGCTTACTGGACTTCGCTATGAAATTGCAGGTATTTCACTTGATGATTGGATCTTCAAATTTGGGTAAGCATCTTATTTTCTCTGTTGTATCATCATTCTATCTATGGATTATTTTTCCCTGAGATCTCCCCGGGAGCTCTTATCAAAAGAAAATATTTGCACTCTTACTCATAATATTGAGTTTCTTAAGCCAATTGTTGATGCATATTTTGTTTTGAATGCACATGGGAGAGATTAAATAATGTGAAGCACAAAATGATAAGCAATTTTAAGAGTTAATGCAATGATATGACTTAGATTAATTTGGAAAATATGAAGTTGGGCAAGATTAAGTAATATGTCGCTTTTCTTTATCATTTATGGGAATACAAGCTTCCTGCAAACCTTTCATCCATATGGGGTAACTGAGTTTTTTTTGAGAAAGGTAAAGTTAATTCTATATATCCACATGTATACTACATCAAAGCGTAGTCACAAGGAACAAATATCAAGAATATTTGTTCCTTGTGTAGCTTCTCACTAACATTTGACTCAATGGTGGAAGTGTTGAAAAGCAACATGTTATGCTTTAATTAAACGTAATTAAAATGTGGGTTCTTCTGAAAAATGTGCTGATACGAAGTAAGAAGGATTTTAATCTAGTGCAATCTATAAAAATAGAAGAAAGAAATATGTATCCAGCACCAGAAAACATAATTATGAACAAAAACAACTAACTCAGACAAATGAGTTGGTAGATACACAACTAGATGAGATATTTAGAGGTAAGACGATGTAAATTAAGTTCAAAGATCATGCCAGTTTTCTAATTTAGATGCAAATTTGCTGCTTTAAGTTTCTGCTGCACTGCATTCTAACTTCTATTCCTAATAGTAACAATTCATTTGTTTTGTTCTTTGTAACAAAGTAAGATATTAACATGCAGGCTGCGTTTCAGCCCAGTATTAAAATGAGTTGAACAAAGCGGGTCAAAATGAGCCCGCTTAATAAAATAAGTGGGTTATTAATCTGTCCGAATCTAAACAGGCTGGGTGGGTTATGATTTTGGGCTGATTTTATAGTATCTTGTTTTCAAAGTAAACAAGCTCAGTTATTTACCTCATTGAGTTTGAGATGACGTGTTAAAGTATCATTACTATTATTATCATATTCTTCAATTAGATCACTGGTGTTGTTTCTTTTACTTGGGTTATCTTCACTATTTTTGTTTTCAGTACTACTCTTTTCTACAATATTTTTACAATAGCTTTTACTCTTGTATATGCCAAACCTGTTTTCGAAAATGTTTTTCTTGATCCGAGGGTCTATCAGGAACCTCTCTACAAGGTTGGGGTAAGGTCTGTGTACACCCCAACCTTCCCAGACCCCACTAGGTATGTCATTGTAGAAGATCTAGCTTCTCGTTTGGTAGAAATTAAGGGCACAAAGTGTATAAGCTAATTTGGACATGGAACTTTGATAAACCACCTGTGCTCGTGTATACAATTATCTTTAATACCTTACCTTTATCTTTTATTTTTTGCTTTCTATGCATTTCATAATGATAAAGTAAGTTACTGTCCAGCAAGTGATCTGTTTGAATTTAGTTGCATTTCATAATGAATTTAATTCTCCTGCAGGTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGGGTATGTGCAAACCCGCCGTTCTTTTTCAACTGAGGCTATTTTAACTAAGACTTATGAAAACTATTTTGCAGCTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTATATCCTTTAACGAGTGAAAATTATTGTTGTGAATTTAACGATTTACCTTCTTTTTATAATTCTAATTTTGAGGAAAAGAAACTAATTTATGAGGGAAATTCAGTATCATGATCTTCCTATTTTTTCTCAGTCATCTTCATTCCAGAAAATAATCTTGGGGCAGAGAAGCAGTACCTGTTGCTTTAATCAGTAAGCTGACAAAACCAGCAGTTTGCGAGACACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTACTTGCTAAAGTTGCGTGACTTCACTTTCAATGCCACACCCGTGTCGGATTCTCCAAAAATCCACTACTTTTGGAGAATCCGACATGCACCCATTGTCATTTATGAAGAGTCTGAGCAACATAGGTTACTTGAGCCTAGTGCTGTTTGTAGATTATAGATACTTCTGCTCTACACCAACAAAGTTGTCACTTGTCATGTATCTCTTTTTTTTAATATCCGATCAGTGGTGCAACATTCAGTGCTTGGTTGATAATGGGCACACTCCTTTATACTTTCTCCACTTAAACAACAACAACAACAAACCCTGTGTGATCCCACAAGTGGGGTCTGGGAAGGGTGGGGTATACCGTATACGCAGACCTTACCTTACCTTTATGGTGGGGTAAAGTTGTTTTCGATAGACTCTCGGCTCAAAAATGGGAAAGAGTGTTTTACAAAACAGGTTTGAAAAATACAAGAGTAGGAGAACTATGATGCAACTATCAAAGAAAAGAAAAATATCGACAACAAAATAGAAAAGATAAGCAAAGTAAAAGAAATAACAGTAGTTCTAAATCTTAAAGAAAAAGGTAACGATACAACAAGAATTATAGTACTGATAAGTATAAGAAGGAGAAAATAATGAACTTCTCCACTTACATACCAGTTCTTTATTTGCAGTGGAATATATACCCGTGACATGCGCCTGACCCACATATCATGACATCACACACTATGTTCTCACCTTTAGACCAAAACCTTGGTGGCCAAAGTTGTCGTGCGTCTTATATCCTTTTGCACTTGAATCTACAAAAATATTACTATACAAGAACCTCTGAAATAAAAGAAAATGTGCAGGGGTCCAAGCCATGAACTCTATCTTCATGTAGAAATTAAATATTGATGAAGTCTAAAATCCTTTTCTGTAAATGAATTTAGGGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTGGTAAAGTTTATGGAATATGCGCATATAATGTTTAAAAGGCAAAATTGTGATTCACTTAGCAGCTCAGTTCACAGGCTTTAAATGCAACTGGCCAACCATGTGGCGAAAAGTCTCTTGAGATAACAACCAAATAAGTGGGGCTAGTCCCACATTTATGCTTTGTGTTATCTGCCTTTTGTGACTCCAAATATCTTTTCTTAGTATTCGAGTATAAATTCATGTTACTGCTAACTTATAAACGATGTGTTTTTGTTCTATAATTTAGTATGTGGTGAAACTATATTAAAATAAACACATCTTATTATCACTTGGGTACTTAATTATTTCTGTTTATCTTGTGCTTATGAATTATATCACATTTTAGTGGGCTTTTTTTGAAAAAAATATTTTTTTCTAAAATTCTTTCAAAATTTTTGTGCGGCATATGTCTGCGTTGTGGCAAAATCCCTACTCTACAAACCCCCTGCTGTGCCCCCACTTTTAAGACATTGTGTGTATGTTCTACATAAAAAATGACACATTGTAACTCACTGTGTTTCTCTTTTTCCAATTTGGTTCTTAATTCATGTATTTGCTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</genome_strand>
        <mrna_strand>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAATATCGTTTTGGATACCATTTCATTTTCTTTTTTACTT-CTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATGC--ATAT--ATATATATATATATATATATATATATATATATATATACAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGGGTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAAGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCACTTGATGATTGGATCTTCAAATTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAAGGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGG.......................................................................CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587655" ref_strand="+" ref_description="SGN-U587655 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=5e-16) unnamed; (*ATH) AT3G59090.1 (e_value=2e-25) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>ggtgtccacgtttttttctctgtattagaggggaaagggctaagaaggattgaggcagtggatggttttttaaaaggtaaagaaaaagagtgagaagaacatgattgagtggagagaagggacttgttatcctaaggctttaatgggagtgaatgtgggtcttgcttctgtcgatgccgttattgcagttcttgcttttgctcagttaatgagaattcactctcggaatacacacaatggctggactcgtcagaaagtatttcacttgatgattggatcttcaaatttggctttccccaaaattcttttccttgcggcatttcttcttctcctttctttctgtcaaatgatgaagaagatgaagatgatgtatatagccctcgagaagctttgttggagaagaacaagccaaattcaaatgctgatagtcgccgaagatgctgctcttttcgtgctgtcaaagtgggaagccgccaaaaagttgtggttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatggattgggaggggaaggaaccctattgattcatctgttgtggctcgggtgtatgtagatctctttgccttagcagttcttttgctgggagtggcattggcatgctatggactggtattgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="116594" stop="128665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116893" g_stop="117097" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117098" i_stop="121151" i_length="4054">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121152" g_stop="121202" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="256" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121203" i_stop="123275" i_length="2073">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123276" g_stop="123309" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="290" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123310" i_stop="125023" i_length="1714">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="125024" g_stop="125075" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="342" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="125076" i_stop="126291" i_length="1216">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="126292" g_stop="126441" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="492" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="126442" i_stop="127027" i_length="586">
            <donor d_prob="0.812" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="127028" g_stop="127123" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="588" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="127124" i_stop="127691" i_length="568">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.040" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="127692" g_stop="127752" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="649" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="127753" i_stop="128350" i_length="598">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="128351" g_stop="128365" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="664" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U587655" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116893" e_stop="117097"/>
          <exon e_start="121152" e_stop="121202"/>
          <exon e_start="123276" e_stop="123309"/>
          <exon e_start="125024" e_stop="125075"/>
          <exon e_start="126292" e_stop="126441"/>
          <exon e_start="127028" e_stop="127123"/>
          <exon e_start="127692" e_stop="127752"/>
          <exon e_start="128351" e_stop="128365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAGGTACTCTTCTCTCCCCCCTGTTCTTCATTGTTTCAGAGGGTGTTGTTATATATGTGGAGTTTCTGCTAAAAATTCTGTATTGATTATTGGAATTTTTTGTGTTGGGTGTTCGTTTCTTGTTCCCAATTTGGGATTTTGGGAATGCATTCCAATTGGGATTTTTGAAGGGTTTTAATGGATTCTGAATGATAATCTTGTTTGTGATGGGCAATGGAAAGGTGCTGTTTCGGCTAGGTTTGTGATATTGATTGAAAAATTGAGTCCTTTTGCTAAATTTTCTTCCTGTGGCTTATTAGTTTCTGGTTTCTGTGTTGTCAATTCCGTTAATATGCTTGAATTCGAAGGAATGTAAGTTCATTTGTCACAATGGGGTTAAGTTTTTTGCTTTCTAATTTATCATGGGTTTATACAGACGCATTTTCTTGAGACAGTTTTCTGCCATTGTCATGCATAGTTTAATATAATAAGTAGTGTATCTCTTTGACAAGTTCTGCTGAATTTAGTAATTTAAAGTTGCAAAGATTCGATTCGAAGAGACCAAATGTAATCTTGTTCTGAATATGGATTTTCTGAAGCAGAAAGCTTATTTTTCACGGGGACTTTGCCATAGATCACTTGCATAGCGATTTTTACTATGATTTCTCTTCCTCTTCTCTGGGAGGAGTAGGATGCAGTTTTTCTGGGCCAAATTGTGATATGTTTTGTCATATAGGGCTTGCAGCAACATTTAGGGAGTTATCGAGAAGTGATTTTCACTGTTTTGAGGGACTTTACCAGTATTATGGCATTTATGGCCAATATGATTACCCATGGAGATTGCATTAAGTATATGATTATTATCTCCACATTCAATAGATTTTGCTGCATTTGGTGAAAATGGTTAGTTTCATTGTTACAATACCATCTAAGATACTAGCTAAATGTGGAACTTTTGAATCATTGGTATTCGTATACCCGCTCTGCATTTGTGTAGGTGAACATGATTTTTGATGTCCTTGAGAATGGGCTAAAATTGGGATTGTTCTTGAAGCAGACTACTGGGATTCAACCATGTGTTGTTTTTCTGTTAATGCTTATCAAATACCATATTAGTCCTACGCTTGCATATTATTTGATTAAAAATGGAATAAAAAACAATTTTATCTGAAATTATATTGTTAAATGATTCTCGGAGAATCAAGAAGATTGTGGGTACTAATTTTATTCATGACAAAGAGATCTTATATGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTATGCCTTCTGGGTCGAGATCGCCTGGTGCGGGTTACCTCTCCTATGTGGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTGTGCGCACCCAAAAGGGTAGTAGCTGCGGGTTTCCCTTGTAGTAAAAAAAAAAAAAGAAGAGAGATCTTATATTTCAATTTTGGACCAGAGATGATACGTGTAAAACTCTTCTTTCTCATTGAGAGTGCAAGATATCATTCCAAAGAATAGTTTGAAAGCTATTCAGAAAGTAGCCAATTTTTTAGAGCTAATGGCTCTTGTTTAAGGCAGGAGAGTACCTTGCTTTTCCTTTTGAGATATCCGGTACTCTAACAGAATTTTGTGATCCTTTTGTTCACTATCCAAATGCAGTTAAAGCAAAAACTTGGTACGTTGGGATAACCTTTAATTGAAAGCTAATATGGTGTAAGCATAACTCAGGGTATGGATCTTTTTTTCCCATCCATGTTGTTGTCAATGCTTCCTGAACTGCAAACCGAATCTCCAAATATCTTCCTTACTCCTCCTCCTTTAGGCATGACCTCTTTGAAGGTTTTTTTTTTCTTTTGATGAAGTAATTAGTTCTATTGCAGGCATCAAGTAGATGCATAATAGTTAGAAAAGCTTAGTAGCAAAAGGTCAGCTCTCCTTTACATTGTTAATTGAGAATCAGGGAGCGGACATGGTTCAGAAATCAGGGCAATCTAGAGGGGATAAATAAACCCAACTATACAAAAACATGAGGCAGTTAGCTTTTAAAGATTGGTAGGTAGTTGATTCCATCAAAGCATCTTCTATTCCTTTCGTTCCAGATACTCCAAAAAATGGCTGCAGGTATCTTTGAAGGTTAACTGACGTACCCCACTTCATATCCCAAGATCATGGTGGATGATGGTTAACTGCAGTGAGGAAGCATTCCCTTTTTCTAATTATTTTTTAAAAAGTCTACTTCTTAAGAAGAAAAAGACATTGCAGACCTGTATCAAAATATTTCATCACTGCTTGGTGCAGCTTTCTGCGACTTAGGTTGCAACTTTCTCCAGTTCTTCTTCTTCAAGCTCCAGCTATGCTGTGTTGCTGCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTACCATGCTGCTATGTTTTTTTTGCTGCTGCTTTCTTTTTTTCTCTTCTCTTGTTTCGGTCTTCTTCAGCTTTTATATTCTTTATTTGTTTCTCTTTTTTTTCTTCTTCAGTATGTTAATTTATTTGGATTTTGTTTATTTGTTGTCTTCTTCTTTTTTTTTCTTTCATGTGTTGCGTGTACTTCTTGTGTCTAATTTTAATTATTTTATTTCCATTTTCTTCTCATATTCATTTTATTCTCTTCTTTTTCAGTAGCTTTTTTTGAATTACAGTTGTTTTTTAATTTTTTGTTCTCTTAACAGCAATTTCAAATGGTATCATCTGAGCAAAATAGAGCCATCAATTTTTTCAATGGCATCATCCATTTATGTTTTGTTTTTTATTTTGCTTGTTCTATCAAGCATTTCTGGCTATCAACTTTCTAGTTTTAAAATTGAAAGATTTGCTTCTATATATTATTTCTGTTGATGTCTTTTTTGATTTAGTTATTTTACTCATATGTGCGAGGTTTATTTTATTTTTGAAATGGTGCTTCACTTCAATGAAGAGAGTGAAGGGAGCTTTTGTTGCTTTTTTGCGCTTCATGCTCTCAAAAACACTGCCTCCCAGCAAACTACTCTATAATTAGTCCAAGGGGAGGGCTAGATTGGTTTTCTTCTACAAGTATAAGTGTCTTCTCCTCATGTATCTTGATTGGTTCAAGATGGAAATCGTTAAGAGTCCCTTGATTATTTGTCCCACTTGAATAAAGAAATTGTTTCTTCGGCTTGGTAACTCTTAAAGGAGGTGTTTGACACATCCCTCGGCAGAAGATGTTACATATGCCTTGTTTTTGCATTGCTCAGTTGCAGCCGATATATGGAAGTATATTCCTGTCCTTTTGTCATTCAATGAGTTATGCCTCATGGTCATAGCATAAAAGCACATACATAAGTGGGGACAATAGAATGTAAGGGAACAATTAAAAAGTTTTGACAGACTGTTCCAGCTTTTATTTTATTTTTTGGTGCCTATGGCTGGAAAGAAATAGCAGAATATGCTTCTCAAGGAGCCTCTTCTCCTATTCATGCTTTGAAGTATGGATGTCTTGGGAACATTTTTTTCTGGAGTAACCATTATATTCTGAATAATTTTGACCAGCTTTTACACTTTGTTAGCTCCTTAGGCGGCATAAAGGAGGATCACTGTTTAATTTAGGTGCTTGCTTAATATGACTAGTTGCTAAGATTGAAAACCAGAGAGGCAGGGGGTGGGGGTTGTGGGAGAGTTTGATGTTGTCAATGAGTTATCAGCATTCAACTACAATCTAGGACCATTGTGAAGATGAGGAATGAATCGAGCAGAGTACTTTTTGACACCAACTGGGTGACTAACTGAAAAAGAGGAAACCTTAATCTAGCTCAATTCTAACCTTGGGATACTGAAGCAATCGAATGGCTGCAAACCAGTTTGGTGCTTCTGTTTAGGTTGCTGCTCGTGCCTTCCGTGGTTGCATAATATTGGTGCAACTCTATTAGAGTATATTCTTGTGCTGTTAATGACACTCACATTTCCAGTGTGGTAGTGATAATTTCTGGTTAAATAGATTGTGCCATCATATTTTTGTGCAACTAAACTTGCTTATCTATTTTTCCAGTTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAAGTAAGTATTTCATCCTCGATTCTCTTGCTGATTTTATTGGTATCTGAGCTGGATGAAAACATTCTGTCCCTCCTACTTTAAATTAAAGTACTTTCCCAAGGTTTAAGTAATTATTGAACAATGTGAAAGCAGGCCAATTTGCTGCCGACACTTTTTGCCTAGTTCCAATTATGAATAGCAAATATACTAATGAAGCATGTTGCTAGATGCTTATATGCGACCGACTTTCCCTTTGATACCGAAAGTTACTGTGATTTGGGTGTTGTTAATTCTCTTTGGGAATTGCACCGAGGGTGTGGCCTAACTGTCAATGAAGATGAAAACCATGGAACATAGAAGAGACAAAGACTCCTAAGTGAGTTCTTCCCATTTGCCTAAGCCTCAGAGGGTAAAGTTACCCTGTATTTGTGTTGGTGTGCGGTAGTCGAAGTGCTCGCAAACTGGTCTAAACACCACAATTACAATAATAGTAGTTTTCTTCGGCAACTAAGACTTAGGTATGCATGTTCATGTGTGTAATCATTTGTATCTTTACATTAACCATAAGTGACAAGGATAAAATCGTGGAGGAGGTGTGCGTATAGGGAGTATAGTTTGAGTAAATGACTGGTTATGTGAGCTCTATTACTGTTGGTACTTGGTATTATTTTATTTTATTTTTGCATACTTATTAGGAACACTTCCCTCATCTGTTTTCCTTCCAGCCAAGCTCCTCACTTATGTTGCCGGTTTACCTATTAAGAGTGTAGAAGAGAGGAGAATGTGAAAAGTCCCAGAACCCATGTTGATGATATTCAACTAAATACTCTTGTCTAAACCATTAGTATTATAATGTTCAAAACGCGTGCCTAGCATTTACGGTTCAGGTGACTTATCATCTCTTTTTAATAATATTAGATAATTCAGGTGACATAACAGTGGTCTTCAGAAGCGAAAATATACTTCAGATTCCTTTACAGTTGTGGTATTAAGTTGCTTCTTTCTCACTATTGCCATAGTAATGAGTAACGATCCTTATCCTCCGTTTCTACAACTTGATAACTATTACCTAAAATTTTCTTTTTTGATAACCATTGCCTAAATTACTGTTCATCATGTAGGTTTTCAAAATTTTAGTATTCATACCAGGTTAGTCTCCAATTTTTTCCATGTGATCTAGTTGTACTCTCTTAATGTATCTCTCTTCCCCTCTCAGTCCTCTGATGAGTACAAATCCAAACTTCAGGATATTAAACCCAGCCTAATTACTTGGCCATTATGGTATTAGTGGTTCATTTATGCTCACATCTAAATTCTTTGGTGTTAGAGATGAGGGGTGTCTATGCTCAGTTCTTGGTGCAAGATCAGTCTATTGATGATTGACCATGGAGGTTTTACGAGTGTGATAATGGTGATATTGAGCTCTGTAACAGTCAGGGTCATAGTAGTGATCGTCTTGTGGAGTTAACCGGTAAATGCTGGCCACTGCTACGTTCTACCATGTTAACTTCCAGCCAAGTGGTACAATGTGTAGTGCAGATTGGGTTGAATATTCTGGTGATGTTACTTCTTCAAAAGAACACAAATGCATCTTTGAATAGCTGAAATTAGTGAATATCGAGGAGTCTTGTTCTGCATGAAATGATCCAAGTATGGTGCAACAAGACGCTTCTTCCACTCATTTGAAGGCACTACCAAAAAACGAGAGTCAGTTTACCTCCTTGTTCTTCTAATACCTGACTGTGAAGTGGCGCATGCTTGATATACCAATTGGAAACGAAACTGGGCTAAACTTGATAATATCTACATAGACTAGCTCCGTGTAATAACAAATAAAAGACTTCATCAACTCTGAGGTAGCACTACATCTCTTGGAGGATATACACATATATTAGAATTTGGAAATATATTGCCTTAATTAGTTTAGTTTACTGCTATGAAGCGACAGTCATCAAGATTTTTCAATGATTCTTCTTCCTTTTGTCCTGGTTAGCCTTAAAAAAAATTCTTTAGTAGATTCAATGAGGCTTCCTTCTTGTTCACTTATGTGCTAATTACAAATCATGCTTACTGGACTTCGCTATGAAATTGCAGGTATTTCACTTGATGATTGGATCTTCAAATTTGGGTAAGCATCTTATTTTCTCTGTTGTATCATCATTCTATCTATGGATTATTTTTCCCTGAGATCTCCCCGGGAGCTCTTATCAAAAGAAAATATTTGCACTCTTACTCATAATATTGAGTTTCTTAAGCCAATTGTTGATGCATATTTTGTTTTGAATGCACATGGGAGAGATTAAATAATGTGAAGCACAAAATGATAAGCAATTTTAAGAGTTAATGCAATGATATGACTTAGATTAATTTGGAAAATATGAAGTTGGGCAAGATTAAGTAATATGTCGCTTTTCTTTATCATTTATGGGAATACAAGCTTCCTGCAAACCTTTCATCCATATGGGGTAACTGAGTTTTTTTTGAGAAAGGTAAAGTTAATTCTATATATCCACATGTATACTACATCAAAGCGTAGTCACAAGGAACAAATATCAAGAATATTTGTTCCTTGTGTAGCTTCTCACTAACATTTGACTCAATGGTGGAAGTGTTGAAAAGCAACATGTTATGCTTTAATTAAACGTAATTAAAATGTGGGTTCTTCTGAAAAATGTGCTGATACGAAGTAAGAAGGATTTTAATCTAGTGCAATCTATAAAAATAGAAGAAAGAAATATGTATCCAGCACCAGAAAACATAATTATGAACAAAAACAACTAACTCAGACAAATGAGTTGGTAGATACACAACTAGATGAGATATTTAGAGGTAAGACGATGTAAATTAAGTTCAAAGATCATGCCAGTTTTCTAATTTAGATGCAAATTTGCTGCTTTAAGTTTCTGCTGCACTGCATTCTAACTTCTATTCCTAATAGTAACAATTCATTTGTTTTGTTCTTTGTAACAAAGTAAGATATTAACATGCAGGCTGCGTTTCAGCCCAGTATTAAAATGAGTTGAACAAAGCGGGTCAAAATGAGCCCGCTTAATAAAATAAGTGGGTTATTAATCTGTCCGAATCTAAACAGGCTGGGTGGGTTATGATTTTGGGCTGATTTTATAGTATCTTGTTTTCAAAGTAAACAAGCTCAGTTATTTACCTCATTGAGTTTGAGATGACGTGTTAAAGTATCATTACTATTATTATCATATTCTTCAATTAGATCACTGGTGTTGTTTCTTTTACTTGGGTTATCTTCACTATTTTTGTTTTCAGTACTACTCTTTTCTACAATATTTTTACAATAGCTTTTACTCTTGTATATGCCAAACCTGTTTTCGAAAATGTTTTTCTTGATCCGAGGGTCTATCAGGAACCTCTCTACAAGGTTGGGGTAAGGTCTGTGTACACCCCAACCTTCCCAGACCCCACTAGGTATGTCATTGTAGAAGATCTAGCTTCTCGTTTGGTAGAAATTAAGGGCACAAAGTGTATAAGCTAATTTGGACATGGAACTTTGATAAACCACCTGTGCTCGTGTATACAATTATCTTTAATACCTTACCTTTATCTTTTATTTTTTGCTTTCTATGCATTTCATAATGATAAAGTAAGTTACTGTCCAGCAAGTGATCTGTTTGAATTTAGTTGCATTTCATAATGAATTTAATTCTCCTGCAGGTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGGGTATGTGCAAACCCGCCGTTCTTTTTCAACTGAGGCTATTTTAACTAAGACTTATGAAAACTATTTTGCAGCTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTATATCCTTTAACGAGTGAAAATTATTGTTGTGAATTTAACGATTTACCTTCTTTTTATAATTCTAATTTTGAGGAAAAGAAACTAATTTATGAGGGAAATTCAGTATCATGATCTTCCTATTTTTTCTCAGTCATCTTCATTCCAGAAAATAATCTTGGGGCAGAGAAGCAGTACCTGTTGCTTTAATCAGTAAGCTGACAAAACCAGCAGTTTGCGAGACACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTACTTGCTAAAGTTGCGTGACTTCACTTTCAATGCCACACCCGTGTCGGATTCTCCAAAAATCCACTACTTTTGGAGAATCCGACATGCACCCATTGTCATTTATGAAGAGTCTGAGCAACATAGGTTACTTGAGCCTAGTGCTGTTTGTAGATTATAGATACTTCTGCTCTACACCAACAAAGTTGTCACTTGTCATGTATCTCTTTTTTTTAATATCCGATCAGTGGTGCAACATTCAGTGCTTGGTTGATAATGGGCACACTCCTTTATACTTTCTCCACTTAAACAACAACAACAACAAACCCTGTGTGATCCCACAAGTGGGGTCTGGGAAGGGTGGGGTATACCGTATACGCAGACCTTACCTTACCTTTATGGTGGGGTAAAGTTGTTTTCGATAGACTCTCGGCTCAAAAATGGGAAAGAGTGTTTTACAAAACAGGTTTGAAAAATACAAGAGTAGGAGAACTATGATGCAACTATCAAAGAAAAGAAAAATATCGACAACAAAATAGAAAAGATAAGCAAAGTAAAAGAAATAACAGTAGTTCTAAATCTTAAAGAAAAAGGTAACGATACAACAAGAATTATAGTACTGATAAGTATAAGAAGGAGAAAATAATGAACTTCTCCACTTACATACCAGTTCTTTATTTGCAGTGGAATATATACCCGTGACATGCGCCTGACCCACATATCATGACATCACACACTATGTTCTCACCTTTAGACCAAAACCTTGGTGGCCAAAGTTGTCGTGCGTCTTATATCCTTTTGCACTTGAATCTACAAAAATATTACTATACAAGAACCTCTGAAATAAAAGAAAATGTGCAGGGGTCCAAGCCATGAACTCTATCTTCATGTAGAAATTAAATATTGATGAAGTCTAAAATCCTTTTCTGTAAATGAATTTAGGGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTGGTAAAGTTTATGGAATATGCGCATATAATGTTTAAAAGGCAAAATTGTGATTCACTTAGCAGCTCAGTTCACAGGCTTTAAATGCAACTGGCCAACCATGTGGCGAAAAGTCTCTTGAGATAACAACCAAATAAGTGGGGCTAGTCCCACATTTATGCTTTGTGTTATCTGCCTTTTGTGACTCCAAATATCTTTTCTTAGTATTCGAGTATAAATTCATGTTACTGCTAACTTATAAACGATGTGTTTTTGTTCTATAATTTAGTATGTGGTGAAACTATATTAAAATAAACACATCTTATTATCACTTGGGTACTTAATTATTTCTGTTTATCTTGTGCTTATGAATTATATCACATTTTAGTGGGCTTTTTTTGAAAAAAATATTTTTTTCTAAAATTCTTTCAAAATTTTTGTGCGGCATATGTCTGCGTTGTGGCAAAATCCCTACTCTACAAACCCCCTGCTGTGCCCCCACTTTTAAGACATTGTGTGTATGTTCTACATAAAAAATGACACATTGTAACTCACTGTGTTTCTCTTTTTCCAATTTGGTTCTTAATTCATGTATTTGCTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGGGTATGGACCAAGGCTCTTTGATTACCAGTATCTATTTATTTGTTTTTCTTGCATATTCTGTAACCTATTTGATTTAGCAGTGGTTGGTTATTTCCAGCCTCACATATTCATTTTTAGCTGCAACCAGATTTTATAACACAATCTATTTGATTTTGGTTTTCACATATTCTTTCTTTAATCCATTTGATTTAGCAGTTGTTGGTTCTCTTTATAGATTACTTTGAGCCTCACATATTCATTTTTAACTGCAGTTAGATTTTATTACGCAAATAAGTATATACCTCTGACTTGGAGCCCAAACTATTTCTTAGTATTTATTGGGAGGAGCATGTCGTTGAAACTTGAAAGTGAGGATGTGTTCTCCTGTGAGTAAGGGTAGTTCTTGTAAAACGCGTTTCATGCTTAAATGAATTAGCATTGTTTTTTTAATTTGCTTTACTATACTAGTCTTTGGTGTTCAAATTATTGTTGGGAGAAAAGAAATTTAGACTGTTTCATGGTGATTTTTTTCTTTGCCACCTTCTCCCCACCTTCCTCTTGATAATTGATGAAGTGCAGTTTCATCCAGGTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATGGTTAGTATATCATACACTGGTATTATTTATCCCCGGTTCCACATTAATGTTCACACGTCCCAGAAAATTGTTGTCTTGCCATTTTCAGTAATATAATCTTATCTATTGCTACTATGCACCATAAATCTTTACATGGGCACTTCAGTACTTGTGTAATAACTAACATCTTGATCCACCATTTCTTCACACAATCAGCTGATGTAAAGATTTGAGTTATTTTATTTAACAATAAGGAGTGATTTACAAATGTTCAAGAGTTCTCTCTCCCTCTGTGTGTGTGTGTGTCCCCAGATGTGGGTCAAGGGGGTGGAGAAGTGATTTCAGAAATAGTTTAGACAATAAGATATGCAGGTTGATAGTTTTAGGGGGTGAATCTGCTGTCTCCCCAGAAAGACAAATTTCTCATCATTAATATCGCGATCGAATGAGTTGATTGTTCAACCAATTATCTGTTTCTCATCGAGCTGTGCGAAATTTCTAGAAACGGTTGTCGTAAAGAACTTGCTGTTTAAATAGGTCTTTTGTGTTCTAATTATTTTGTGTGAAGGTTTTCTATTCAAAAACTGTCTTTTCTGACCATACTATCTCGTCTATGCAGGACTGGTATTGTTCT</genome_strand>
        <mrna_strand>GGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCACTTGATGATTGGATCTTCAAATTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTATTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595196" ref_strand="-" ref_description="SGN-U595196 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=2e-13) unnamed; (*ATH) AT3G59090.1 (e_value=2e-12) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>attttataggttcttctataccttcagcatttgtgctatgggtgatgagagaactaccacctccacttgtcactttcagtcaacaggagtcgaggacaatagcttttataaatgacagttcagcgacagtacagcctcagcgatggacagctgctgcaagtgtgcaaaatcaggtctcaagggcgagccccatatgatcaccgtgatggaatttgtaaattgattggtgattttcagctagagtgaaggactgacaatactaaaaatgaaagaacttctcagttgagtggtcggtgttgtggttgagtgatcgaagaaagctcaactcaacggataaaaaataccccttgcaactaaggtggttgctcagggtacacatgcctgcataacttggattcttgtacatagcaatgaactttctaaattttacagattctttttcgttgatataatgaggttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="129345" stop="130877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129645" g_stop="129817" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129818" i_stop="130283" i_length="466">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130284" g_stop="130577" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="463" r_length="290" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U595196" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595196" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="129645" e_stop="129817"/>
          <exon e_start="130284" e_stop="130577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCCAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAGGTTTCTTGCCTTCTTTTAACTCTAATGCACACCTTGTTTGTTGATTTGTCTCTAGTCGTGTGCATCATGATCTTGAGTAGGGAACACGTAGAAAATGCATGTTCATTTACAAGGGCTATAAGCCTATCACTGATTAAATGAAATGGAAAAAAGTTCAAGACGAAGCAAATAAATTATTTATCTCCTGGCACATTACACTAGGGATGGGGAAATCATGGTAAGTGAAGCTATGGCTACAAATCATTTTAGCTGTCCATTAAATTTTTCGTTAAGATCCACCAACTCACCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAGCATTATTTTTAACCTCACATCAAAACCCAAAAGAGAATGTGAAAGTAGAGTGCAAAATCAATGAAGAACTCTTTTCATTATCTTACACTAGATGGATTCACAAACTTGTACCAATGTGTTCTAAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAACTAAGTAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAG</genome_strand>
        <mrna_strand>ATTTTATAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAAC----TAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTCGTTGATATAATGAGGTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581846" ref_strand="+" ref_description="SGN-U581846 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157359023|emb|CAO66925.1| (e_value=2e-48) unnamed; (*ATH) AT1G53530.1 (e_value=2e-43)  Symbol: None | signal peptidase I family protein, contains similarity to SP:P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I | chr1:19981821-19983751 F... ; (*SWP) sp|Q9CQU8|IMP1L_MOUSE (e_value=1e-26) Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l; ">
      <seq>tcaaacttaagggactactatagaaaatatttttctcaactttctctacaccggagaatgcacaattagaccaccaaattccgggctgtgttcgctgtgcgtcaatcggagattgcacaattaaatagcgggggccgtgttcgccgtcgagtagaggtcggggttactgtggtactctttcgcctgattctgtcatccattttaattggtgagatagcctctttagggttgagatgcagattgactaataatgggtctgaaaaatctgaagcaattgacgccttttatcaaagaagcatttcagcaaacattactcgtagccaaattcctctgtggtattcatgtggtcaacagctatatctgcaccttagctctcactcaaggtccaagcatgcttccaacgtttagtctgactggagatcttgttttggctgaaaggctatcaactcggtttgagaaaatgcaacgtggagatgtagtgctagtgcgtagccctgagaacccgagaaaaattgtgatcaaaagaatcatgggcatgggtagtgatactgttagatatgttgtggatcatgcaaataatggaatagaacatactattgtggtaccagatggacatgtttggattgaaggggataacaaattcaataccaacgattcgaggaactttggacctgtaccttatggacttgtacagggcagagtcttttggcttgtatggcctcctgaaaattttggatcagtaggaagagaagtacagtaaatcaacctttcaagatttggagtatgcttgtagagtattctctcacaagcctggattttaaacaatttactgaagatggcaactggtgggttgctttactacttggttcgaggtggaagacaggacgcaagagctgttaaatatattcggttaatgtatttctctaactccaaagggtgcacgggtttgcataattttgctcttgaagtgccactgctaatgcattagctcgaaggcttctttttctattttactttgtcgttgttcttctttcaaaagagtcgtttggactaatgggatttggcagtcacttctcgtataaacttgagcctttgtagtcagtgttaccgctgggaagttacatgtacctggtctctaaggtgcaggcaagctttgccaaaacacagcactacattttaattctcatttttctgatagttacatgttcctttaaataatacagtagtaaattttttaattttaattaactgatgtatatatccaaaagctaggagttaagctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="134267" stop="130568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133967" g_stop="133592" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133591" i_stop="133478" i_length="114">
            <donor d_prob="0.819" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133477" g_stop="133253" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="601" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="133252" i_stop="133079" i_length="174">
            <donor d_prob="0.845" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133078" g_stop="132968" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="712" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="132967" i_stop="132245" i_length="723">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132244" g_stop="132183" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="713" r_stop="774" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="132182" i_stop="131376" i_length="807">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.798" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131375" g_stop="130867" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="775" r_stop="1284" r_length="510" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U581846" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1283</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133967" e_stop="133592"/>
          <exon e_start="133477" e_stop="133253"/>
          <exon e_start="133078" e_stop="132968"/>
          <exon e_start="132244" e_stop="132183"/>
          <exon e_start="131375" e_stop="130867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACTTAAGGGACTATTGTAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTCGTACGATAGCTTAACCAGTAGTACTATACTGTTTTCTTAGTTTACTACTTCATGCTTTGGACCAATTGCACTGCAATTTTTAAATCTGTATTTTGTTTCATATATTTTGGGCAGACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTGGTAATTCAGAATTGATCAAATACCTTCATTTACAACTGATTTTCTCCTCTTTTGCAGTTGGTAAATGTTTGTAGTTTACTTTCAGGAGCTAATGTAGTTGGGTTTTTGCTGCCCTATTTTCTTTGCGCCGCTCCACTTTTGTTTCTTAGGTGAATATGCTTTGAATGTGAACAGGTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTTGTCAGTAATTCTTCTCTATTTTAATTTTTAGCTAATTTGCCAAACTGTTAGGACTTTATTATATTTTGGAAATATTTTTTGCTTAATTTCGTGGAACTGTTTTCGAAGGTATGTTTAACGCCATCATATTGCTGTCCTTATGCATGCCATTTGATGATTATGTTTAAGACAATTTTTAATTTTTTTAAGTTTGAATTGGTAAGTCAGATTTTTATCTTTGTATTGTTTGATAAGATTAAAAGAATAGCTAAGTCTCCTGTAGGACTTGCCAGAAGGAACACCTGCCATAGGAATCATGTCTAGCTTGTGCATAAGCAGCATTTTCAGGGGATTCTATTGTGCTAAATAGTGTGTGCGCTGATTTTATTGGTACTGTTTGGTACAATTTGGTTAGTTAGGGGCTTAAGGCTAAAATCTCTACATATATGCATAAGCACACCTAATCTTGTGAACGTGTTTAATACTTCAGGTTCTTGTAGACTAGTTGATACTTGTGAAATTCATCCAATATGTTTTATGTTTCTGACTTGAATTCATAAACCAACAGATATGTCGCTAGCTATTTCTGGAGAGTCATCTTCAATTAGTAAACTAGGAACGTTGTAAAACAAAATGTGTAACCTTTTTGATCTTTTTTCCGTATTTGAAGTACTTGTTTGTGCAGCATTCTATCTTTAATTTTGCTGCGTTGTAGAAATCTTAAAGTTCTGATGTTGTCATTAGGTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAGGTATGCTTGTTTAGAATTTCATGCTTAATATGTTTTTGCTAATTAGGAGGTTGGATCATTTGTTATGAACTTGTGCCATTGCTTTGCAATGTTGTCCTCATTTCACTTTGATATTTGCCTTCATTTCGTCACTGATTTGATTCCTGTGTTCTATATTTTTTTCTCTTTATTTTTCCAAATTAGTCTTAGTGAACTATTTATGCTACTGTCAATTTTTTCAAGAACTTATGAGGGAGGAAGTTATGTGAACTTTATATGTGTTAAACTTCAAGTTCTCACTTAATGAGAGGTAGCAAAATGTTTAGGAATCAAATATTGTGTTTAGGTTTCTTCCTAGTGTTTTTCTTTCTAAAAGTTTTCTGTTTTCTCCCCTGGCTAATTCAAATTTCCTCCTAGTGGTTTTCCTTGTAGAAAATTTGCACATTTTCAGACTAAGCTTCTTGTTTGCTTCATGTTTTATCTAGCGTATTACGTCCAAATGCTAGTTGTATATTTTTGGTTGTGACTGGAAAAATGTGTGCTTGGTAATGTATGACAAGACTATGGCTCGTAATAATGTATCCTCTGCATAATATTCTGATTTTTGTCATGTTTAGTTCTATAAGAATAATATAATGCTGGCATGTGATGAATTTAAATGTAGAAACCTGATAGGTGAGAATTTATATAGCTGATCCCAACTTGTATGAGAAGGTATATATGTGTTGTTGCTTCCCACAACAATGACATATGATTTTGTTGGACCTTGTGATAAACCTGTTTTCCTTGTTGGTAGCTAAAACCGGTTAATGGACTTTACCTTGGCAGATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAA-TTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAG</genome_strand>
        <mrna_strand>TCAAACTTAAGGGACTACTATAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCGGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTC..................................................................................................................ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTG..............................................................................................................................................................................GTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTGGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAACTCCAAAGGGTGCACGGGTTTGCATAATTTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595923" ref_strand="+" ref_description="SGN-U595923 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359023|emb|CAO66925.1| (e_value=5e-17) unnamed; (*ATH) AT1G53530.1 (e_value=4e-15)  Symbol: None | signal peptidase I family protein, contains similarity to SP:P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I | chr1:19981821-19983751 F... ; ">
      <seq>gttttctgggcgtcaatcggagattgcacaattaaatagcgggggccgtgttcgccgtcaagtacaggtcagagactacttcatcctctttcgcctgattctgtcatccattttaattggtgagatagcctctttagggttgagatgcagattgactaataatgggtctgaaaaatctgaagcaattgacgccttttatcaaagaagcatttcagcaaacattactcgtagccaaattcctctgtggtattcatgtggtcaacagctatatctgcaccttaactctcactcaaggtccaagcatgcttccaacgtttagtctgactggagatcttgttttggctgaaaggctatcaactccgtttgagaaaatgcaacgtggagatataatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="-" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="134178" stop="133071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133878" g_stop="133592" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133591" i_stop="133478" i_length="114">
            <donor d_prob="0.819" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133477" g_stop="133371" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="394" r_length="107" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="-" ref_id="SGN-U595923" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133878" e_stop="133592"/>
          <exon e_start="133477" e_stop="133371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTG-GGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTCGTACGATAGCTTAACCAGTAGTACTATACTGTTTTCTTAGTTTACTACTTCATGCTTTGGACCAATTGCACTGCAATTTTTAAATCTGTATTTTGTTTCATATATTTTGGGCAGACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCT</genome_strand>
        <mrna_strand>GTTTTCTGGGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCAAGTACAGGTCAGAGACTACT-TCATCCTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAACTCTC..................................................................................................................ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCCGTTTGAGAAAATGCAACGTGGAGATATAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567931" ref_strand="+" ref_description="SGN-U567931 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157359019|emb|CAO66921.1| (e_value=1e-14) unnamed; ">
      <seq>tggtagtcccctccctacccctaacccctaccccctctcttcactcgcatatcccaataacaaaccacgagcttctgcttcaacatttgcatctgacactcacctcttccctctctagaaaaaaaattcagaaaatctagtgaagaaacaacaaagatctttttttttttttttttcatttggtggcttggattgaagactataatatactgcactggaccaatcaacatgccgtgggcattttcttctctgagttattgtgtgaagtgtgtgcgctttgtggtattctttcgtgtgattctgtaacccatttcacttgattgcggaatcactttattttctgtcttgtgatatttcttgatactagtctatttggaggttgagaatgtacattgcgattaccttgaagagatacagagcagttaaagaagctggtgagattaaaatgcatgtggggagtgttgcttattaccaattgatgctagtttgtcaggctgagtacttccgtcagttgcttaaacctgtaacgtagtctgctaaagtgtaagctttggggaggttgggattgcttacttcttgttgctcttattcagcaaagcctgttgaagttgggattttttgcttctctttcagtgtatacgaaatcagaatgacctcattaagcactgaatgtggttactgttgattggaattgtcagtgcttttttactacaactaatacaccttgaacattactctcttttgcctgtgcctttcgtaactcttagctactttcatttttaaaacatcccaagtggaaaacacttttctagtccagtttattggatctttgacttagttactcatgcagaataactatcaattttcccctcaaattcaaaagccttttgtctctctggaagaccaagcagctggtggtaatatatttgatattcctgttccatccgtctttgatacaatggcacttcctactagtttcaaatcttctgtgccctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="140104" stop="143291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140404" g_stop="140583" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140584" i_stop="141184" i_length="601">
            <donor d_prob="0.588" d_score="0.87"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141185" g_stop="141320" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="319" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="141321" i_stop="141730" i_length="410">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="141731" g_stop="141904" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="493" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="141905" i_stop="142485" i_length="581">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="142486" g_stop="142991" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="999" r_length="506" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U567931" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>996</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140404" e_stop="140583"/>
          <exon e_start="141185" e_stop="141320"/>
          <exon e_start="141731" e_stop="141904"/>
          <exon e_start="142486" e_stop="142991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATC---TTTTTTTTTTTTTTCATTTGGGTATGTTCAAAGTTCTTTTTTTTTTTTTGGTTTAGATTTGTTGCTTTAGTCTTTGATTTGAGGTTGATTGTGTTGTTTCTTTTTTTGGGATTTTATCTGACTTGATTTGATGATTTGGGTATTTGTGTTCTTGGTTTAATTTTGTATGGTTAGTGAAGAAAGGAGAAAAATAGTATTTTTTTTTGAGGTTTTTAGATTCATTATGGTTTCTTGTATTGAATTGATCTTAGGTTTGTATTGATTCAATGATAGTGTGTGAATTTCATAGAGGGGTGATCTCTTCTACCGAACTTTTTTGCATCTATTGGTGATTTTTTAAGCATTTGTGATTTGCTGGGAATTTGGGTTTCGACAGTTTATTTGTATTAAGGAGTTTTACTGTAAAGAATATTAGTTTCCTTTTGAAGGAAGCATTGTAAGTTGGTGTTTATTTCTATGAGCTTTTATAATATTATGTTTTGCTATTTGTGTGCTTATTGATTATTATTGATATTTAGAGTTATGTTTTGCTATTTGTTTGCTTATTATTGTTAAAGATGAGCTATTTGTGTTCTTATTGATTATTATTGATATTCGGAGTTGTGTTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTGGTGAGATAGCCTCTTGTATTTCCTAAATCTCTATCTGTCTCTTCAGCCTTAGATTTTATTTGTTTCTATGTAACTATTGCACCTTCGAGATAGAGATAAGGTCTGGGAATGTTGTTGTTGTTGTGGTGTGTAAATATTGCGGATTAACTATTCCTGTTGAGGATTTACTAAAACAGAACAGTAATGCCCAAGAGATTAAAAAAAAACTTATTGCCGAAAAGTATTTAGAAGAAGATAATTTTAGTTGGGTTGACAATAGAGAAATGGAAATTAAAGTTGTATTACTCGAGTGTTATTCAGGTGATGGATCCATTAGTTTTACAGTGGTTCGCTACTCACTTGAGAAATAAGTTTTGCTTGTATTGATGTTCTTTAATGTTTTACTCATTTGTGCTTGTTTGGTATGACAGATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGC-TTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</genome_strand>
        <mrna_strand>TGGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATCTTTTTTTTTTTTTTTTTCATTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTCACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCC-TGTTGAAGTTGGGATTTTTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTCATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567930" ref_strand="+" ref_description="SGN-U567930 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|147767796|emb|CAN76054.1| (e_value=1e-53) hypothetical; (*ATH) AT1G29950.1 (e_value=4e-28) | Symbol: None | expressed protein | chr1:10493445-10494582 FORWARD | Aliases: T1P2.2; ">
      <seq>ttttgctattctcgcagtggcttggattgaagactataatatactgcactggaccaatcaacatgccgtgggcattttcttctctgagttattgtgtgaagtgtgtgcgctttgtggtattctttcgtgtgattctgtaacccattttacttgattgcggaatcactttattttctgtcttgtgatatttcttgatactagtctatttggaggttgagaatgtacattgcgattaccttgaagagatacagagcagttaaagaagctggtgagattaaaatgcatgtggggagtgttgcttattaccaattgatgctagtttgtcaggtaaatattcttttagcttttggtcctgtctttttgattaaattgcactgaatccaaccaaactcgtacagtctaaaggaaatagagacaaatcaactagaacttaattgaatattgtatgggaggattcttttttgtgtttcagtcttctgtttatgttctgactggtattttgtgccaggtgcatgatcttctactgacagtcttattaagacttggcttaaaccactatgaaaatgttgaacactattcctctttctatcaatattgactttatcactgaggttgagtacagaaaattgtttatcctcagtgtagtgtactgctatatagtttccataggcatcttgatatccatacagataaccgcgtctgtattgaaatataacttttgtatgccttctgtataatgctcatcttaccaagtgtatggtggttccgttcaacctcaagacaatgagaatagttgggattattttctaggcatattgtttccttgttttaatatttttcttatcttgcatttgttctgaatgtatgacaacccaatgatatggttctttggttcttgctttttacaggctgagtacttccgtcagttgcttaaacctgtaacgtagtctgctaaagtgtaagctttggggaggttgggattgcttacttcttgttgctcttattcagcaaagccttgttgaagttgggatttgttgcttctctttcagtgtatacgaaatcagaatgacctcattaagcactgaatgtggttactgttgattggaattgtcagtgcttttttactacaactaatacaccttgaacattactctcttttgcctgtgcctttcgtaactcttagctactttcatttttaaaacatcccaagtggaaaacacttttctagtccagtttattggatctttgacttagttactcatgcagaataactatcaattttcccctcaaattcaaaagccttttgtctctctggaagaccaagcagctggtggtaatatatttgatattcctgttccatccgtctttgatacaatggcacttcctactagtttcaaatcttctgtgccctttcatggttttgaatttcagtcctctgaggcatgtccaaagaatttcatcatctttgatcagactgattaccggagccagatcatgtaccaccctgccatgacctccaaattcccatatcctgatctgaattataattcaacttgcttccacgactgcatggagagaaaaattgcaaacaatgagaatacagaagtttcttcatatctgaaggaagattcagatgatataaatgcattgctcagcttggaagaggaagaacgtgaggaatgtgatgaagaagaggtgagcactgcacgcactgatgcaaactatggatgcagttcccctgaatcatactcaaactatcattgtcaatccaaaaagagcaggacctcttctttcagggaatcctctggtagcagtactagcaattgcagtgagagaaaacgcaggaaacttaagaagatggtcaaggcattaaagggaatcgtccctggtgccagcaggatgaatactgtcaccgttcttgatgaagctgtcagatacctcaagtcacttaaggtggaagtgcagaagcttggagtcgataatctgaagacatatgcctgatatcctttgtggtataggtaatttcgcttcctttatcaccgtcacatgattatgaaccctagtcatatcttttgcttatgtgaagaagaactacttataccgtcgtattgctgagttgctgctctggagggggtaacgtaacgtagaatatggtcctttgtccagcgataggacaataagtctgctgtagtagctagctgctatatctaatttctcattctagcatatagtatgtttccactagttgcaaactctattaaggcatttgaataatttctccaatatgtgacactctttcacctattggagctgctatttgttattgttgttgtatgactttgatgatttgttttaatggataatgggttgatgattacnctttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0122F06-5tugT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0122F06.1" temp_strand="+" temp_description="C02HBa0122F06.1  AC215389.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0122F06 sequenced_by:kribb upload_account_name:korea">
        <position start="140868" stop="144263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141168" g_stop="141320" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141321" i_stop="141730" i_length="410">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141731" g_stop="143963" g_length="2233"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="2387" r_length="2234" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0122F06.1" gen_strand="+" ref_id="SGN-U567930" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0122F06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141168" e_stop="141320"/>
          <exon e_start="141731" e_stop="143963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTGGTGAGATAGCCTCTTGTATTTCCTAAATCTCTATCTGTCTCTTCAGCCTTAGATTTTATTTGTTTCTATGTAACTATTGCACCTTCGAGATAGAGATAAGGTCTGGGAATGTTGTTGTTGTTGTGGTGTGTAAATATTGCGGATTAACTATTCCTGTTGAGGATTTACTAAAACAGAACAGTAATGCCCAAGAGATTAAAAAAAAACTTATTGCCGAAAAGTATTTAGAAGAAGATAATTTTAGTTGGGTTGACAATAGAGAAATGGAAATTAAAGTTGTATTACTCGAGTGTTATTCAGGTGATGGATCCATTAGTTTTACAGTGGTTCGCTACTCACTTGAGAAATAAGTTTTGCTTGTATTGATGTTCTTTAATGTTTTACTCATTTGTGCTTGTTTGGTATGACAGATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGC-TTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCGGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAATGTGAGGAATATGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACACTTTATGC</genome_strand>
        <mrna_strand>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTCATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCAGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAACGTGAGGAATGTGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACNCTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>28</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1033" PGL_stop="3688"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1033" e_stop="1055"/>
            <exon e_start="1364" e_stop="1528"/>
            <exon e_start="2095" e_stop="2243"/>
            <exon e_start="3242" e_stop="3688"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="0.826"/>
          <exon-intron don_prob="0.990" acc_prob="0.993" e_score="0.988"/>
          <exon-intron don_prob="0.940" acc_prob="0.923" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.826">
            <gDNA_exon_boundary e_start="1033" e_stop="1055" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="1056" i_stop="1363" i_length="308"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="1364" e_stop="1528" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.993">
            <gDNA_intron_boundary i_start="1529" i_stop="2094" i_length="566"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2095" e_stop="2243" e_length="149"/>
          </exon>
          <intron i_serial="3" don_prob="0.940" acc_prob="0.923">
            <gDNA_intron_boundary i_start="2244" i_stop="3241" i_length="998"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="3242" e_stop="3688" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1033" stop="1055"/>
              <exon start="1364" stop="1528"/>
              <exon start="2095" stop="2243"/>
              <exon start="3242" stop="3688"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCATCAACCAACATGTTCCTAAG : GTGAATTCTCATAGGATATTTGATATTGAAATTCATGGAATATTATTATGGGCTTCAATGGGATTCTTGATGCCAGCTGGAATACTCACAATAAGATTCTCCAATACAGAAGAGTGTAGCACAACAAAACTCAAAATTCTCTTCTATGTTCATGGAACTCTTCAG : GTACTCTCTGTGGTGTTGGCTACTGCTGGAGCTGTGCTATCAATAAAGAGCTTTGAAAATTTGTTCAACAATACTCACCAAAGAATAGGCTTAGCACTTTATATTGCCGTCTATGTCCAATTTTTTATGGGATTTCGAAGGCCTATGAG : GGGAAGTAAAGGAAGAAGTGTGTGGTACTTTTTCCATTGGCTACTTGGAACAACAATATGTTTGGCAGGAATTATCAACACTTACACAGGCTTAAATGCTTACAATCAAAGAACATCAAAGCCAATAAGCCTTTGGACAATAATTTTTACAGCTCAAATATCATTCATGGGATTATTCTATCTTTTCCAAGACAAATGGGAATATATACAAAAGCAAGGGGTCATTCTTAACAACAATGAAACTACAACACCTCAAGTGGAAATAGTTGTTCCTCAAAATGATGAACAAAAGATGATAATGAGAACTGAGTCAGGAAGGAAAAGCAATGCACTTGGTACTTTCTTTTCTAGACATAATGTCCTAAACAAATTATTTCAACAAACTTGAAATGTTTTCATGTTTCTTGTAAATTACTAGTTTCTCGATACGCATGTGTATTTTGTATG</gDNA_template>
            <first_frame> A  S  T  N  M  F  L  R :   *  I  L  I  G  Y  L  I  L  K  F  M  E  Y  Y  Y  G  L  Q  W  D  S  *  C  Q  L  E  Y  S  Q  *  D  S  P  I  Q  K  S  V  A  Q  Q  N  S  K  F  S  S  M  F  M  E  L  F  R :   Y  S  L  W  C  W  L  L  L  E  L  C  Y  Q  *  R  A  L  K  I  C  S  T  I  L  T  K  E  *  A  *  H  F  I  L  P  S  M  S  N  F  L  W  D  F  E  G  L  *   : G  E  V  K  E  E  V  C  G  T  F  S  I  G  Y  L  E  Q  Q  Y  V  W  Q  E  L  S  T  L  T  Q  A  *  M  L  T  I  K  E  H  Q  S  Q  *  A  F  G  Q  *  F  L  Q  L  K  Y  H  S  W  D  Y  S  I  F  S  K  T  N  G  N  I  Y  K  S  K  G  S  F  L  T  T  M  K  L  Q  H  L  K  W  K  *  L  F  L  K  M  M  N  K  R  *  *  *  E  L  S  Q  E  G  K  A  M  H  L  V  L  S  F  L  D  I  M  S  *  T  N  Y  F  N  K  L  E  M  F  S  C  F  L  *  I  T  S  F  S  I  R  M  C  I  L  Y  </first_frame>
            <second_frame>  H  Q  P  T  C  S  *   : G  E  F  S  *  D  I  *  Y  *  N  S  W  N  I  I  M  G  F  N  G  I  L  D  A  S  W  N  T  H  N  K  I  L  Q  Y  R  R  V  *  H  N  K  T  Q  N  S  L  L  C  S  W  N  S  S   : G  T  L  C  G  V  G  Y  C  W  S  C  A  I  N  K  E  L  *  K  F  V  Q  Q  Y  S  P  K  N  R  L  S  T  L  Y  C  R  L  C  P  I  F  Y  G  I  S  K  A  Y  E  :  G  K  *  R  K  K  C  V  V  L  F  P  L  A  T  W  N  N  N  M  F  G  R  N  Y  Q  H  L  H  R  L  K  C  L  Q  S  K  N  I  K  A  N  K  P  L  D  N  N  F  Y  S  S  N  I  I  H  G  I  I  L  S  F  P  R  Q  M  G  I  Y  T  K  A  R  G  H  S  *  Q  Q  *  N  Y  N  T  S  S  G  N  S  C  S  S  K  *  *  T  K  D  D  N  E  N  *  V  R  K  E  K  Q  C  T  W  Y  F  L  F  *  T  *  C  P  K  Q  I  I  S  T  N  L  K  C  F  H  V  S  C  K  L  L  V  S  R  Y  A  C  V  F  C  M </second_frame>
            <third_frame>   I  N  Q  H  V  P  K  :  V  N  S  H  R  I  F  D  I  E  I  H  G  I  L  L  W  A  S  M  G  F  L  M  P  A  G  I  L  T  I  R  F  S  N  T  E  E  C  S  T  T  K  L  K  I  L  F  Y  V  H  G  T  L  Q  :  V  L  S  V  V  L  A  T  A  G  A  V  L  S  I  K  S  F  E  N  L  F  N  N  T  H  Q  R  I  G  L  A  L  Y  I  A  V  Y  V  Q  F  F  M  G  F  R  R  P  M  R :   G  S  K  G  R  S  V  W  Y  F  F  H  W  L  L  G  T  T  I  C  L  A  G  I  I  N  T  Y  T  G  L  N  A  Y  N  Q  R  T  S  K  P  I  S  L  W  T  I  I  F  T  A  Q  I  S  F  M  G  L  F  Y  L  F  Q  D  K  W  E  Y  I  Q  K  Q  G  V  I  L  N  N  N  E  T  T  T  P  Q  V  E  I  V  V  P  Q  N  D  E  Q  K  M  I  M  R  T  E  S  G  R  K  S  N  A  L  G  T  F  F  S  R  H  N  V  L  N  K  L  F  Q  Q  T  *  N  V  F  M  F  L  V  N  Y  *  F  L  D  T  H  V  Y  F  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1035" stop="1055"/>
                    <exon start="1364" stop="1528"/>
                    <exon start="2095" stop="2243"/>
                    <exon start="3242" stop="3629"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>720</number_coding_nucleotides>
                  <number_encoded_amino_acids>240</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INQHVPKVNSHRIFDIEIHGILLWASMGFLMPAGILTIRFSNTEECSTTKLKILFYVHGTLQVLSVVLATAGAVLSIKSFENLFNNTHQRIGLALYIAVYVQFFMGFRRPMRGSKGRSVWYFFHWLLGTTICLAGIINTYTGLNAYNQRTSKPISLWTIIFTAQISFMGLFYLFQDKWEYIQKQGVILNNNETTTPQVEIVVPQNDEQKMIMRTESGRKSNALGTFFSRHNVLNKLFQQT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="6682" PGL_stop="10339"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6682" e_stop="6807"/>
            <exon e_start="6892" e_stop="7080"/>
            <exon e_start="7584" e_stop="7644"/>
            <exon e_start="8188" e_stop="8389"/>
            <exon e_start="8538" e_stop="8659"/>
            <exon e_start="8764" e_stop="8868"/>
            <exon e_start="10088" e_stop="10339"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.460" acc_prob="0.728" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="0.990"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="6682" e_stop="6807" e_length="126"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6808" i_stop="6891" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6892" e_stop="7080" e_length="189"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="7081" i_stop="7583" i_length="503"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7584" e_stop="7644" e_length="61"/>
          </exon>
          <intron i_serial="3" don_prob="0.939" acc_prob="0.997">
            <gDNA_intron_boundary i_start="7645" i_stop="8187" i_length="543"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8188" e_stop="8389" e_length="202"/>
          </exon>
          <intron i_serial="4" don_prob="0.460" acc_prob="0.728">
            <gDNA_intron_boundary i_start="8390" i_stop="8537" i_length="148"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="8538" e_stop="8659" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="8660" i_stop="8763" i_length="104"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="8764" e_stop="8868" e_length="105"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="8869" i_stop="10087" i_length="1219"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="10088" e_stop="10339" e_length="252"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6682" stop="6807"/>
              <exon start="6892" stop="7080"/>
              <exon start="7584" stop="7644"/>
              <exon start="8188" stop="8333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587809" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6691" stop="6807"/>
              <exon start="6892" stop="7080"/>
              <exon start="7584" stop="7644"/>
              <exon start="8188" stop="8389"/>
              <exon start="8538" stop="8659"/>
              <exon start="8764" stop="8868"/>
              <exon start="10088" stop="10339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567848" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATCTCCCCTGTACCCTTGAGATACCCTCTGTGACTGAGAATCTCCACTCAAATGGCTTCTTCAGACCACCATATGAATGACCACCACCACCATCATCATCATGACCATGACCATAACCATGA : GGACACAAAAGCGACATCATGGGTAGGAGCAGATGGGAAAGTATACCATAGTCATGATGGGTTGGCTCCTCACTCTCATGAACCTATTTATTCACCTGGCTACTTTAGCAGAAGGGCACCTCCACTTAATGACAGGAATTTCAGTGAAAGAGCCTTTACTATTGGAATTGGTGGCCCTGTTGGTACTGG : GAAAACAGCTCTAATGCTGGCATTATGTAAAATCTTGAGGGAAAAATACAGTCTTGCAGCA : GTAACAAATGATATATTCACGAAAGAAGATGGAGAGTTCTTAATAAAACATGGTGCATTGCCGGAGGAAAGGATTCGAGCAGTGGAGACAGGAGGATGCCCACATGCTGCTATTAGGGAAGATATAAGCATTAACCTTGGACCTCTTGAGGAGCTTTCTAATTTGTACAAAGCAGATATACTACTCTGTGAATCTGGTGGAG : ACAACCTAGCTGCCAACTTCAGTAGGGAACTTGCTGACTACATAATCTACATAATAGATGTATCTGCGGGTGACAAAATTCCTCGAAAAGGAGGTCCCGGAATTACACAAGCAGATCTCCTT : GTGATAAATAAGACCGACTTGGCACCAGCTGTGGGGGCAGATTTGTCCGTCATGGAGCGTGATGCACTTCAGATGCGGGATGGTGGCCCTTTTGTTTTTGCTCAG : GTGAAGCATGGGGTTGGCGTAGAGGACATAGTGAACCATATCTTACAATCCTGGGAAGTTGCAACAGGCAATAAGAAGCGCTAATTGAAAACTTCACTTGAACATTGTGGATCTTTTGGCTTATCCAGTGCTATTATATAACATTCAATTTCCCTGTTTCTGGACTAATATAATCTGTCTACTGAATAATGCTTGTTATGTACAAGCACCTAGTATTTATAAGTTCCTATATTTAATTTGGTTTGTTTGATC</gDNA_template>
            <first_frame> F  Y  L  P  C  T  L  E  I  P  S  V  T  E  N  L  H  S  N  G  F  F  R  P  P  Y  E  *  P  P  P  P  S  S  S  *  P  *  P  *  P  *  :  G  H  K  S  D  I  M  G  R  S  R  W  E  S  I  P  *  S  *  W  V  G  S  S  L  S  *  T  Y  L  F  T  W  L  L  *  Q  K  G  T  S  T  *  *  Q  E  F  Q  *  K  S  L  Y  Y  W  N  W  W  P  C  W  Y  W  :  E  N  S  S  N  A  G  I  M  *  N  L  E  G  K  I  Q  S  C  S   : S  N  K  *  Y  I  H  E  R  R  W  R  V  L  N  K  T  W  C  I  A  G  G  K  D  S  S  S  G  D  R  R  M  P  T  C  C  Y  *  G  R  Y  K  H  *  P  W  T  S  *  G  A  F  *  F  V  Q  S  R  Y  T  T  L  *  I  W  W  R :   Q  P  S  C  Q  L  Q  *  G  T  C  *  L  H  N  L  H  N  R  C  I  C  G  *  Q  N  S  S  K  R  R  S  R  N  Y  T  S  R  S  P   : C  D  K  *  D  R  L  G  T  S  C  G  G  R  F  V  R  H  G  A  *  C  T  S  D  A  G  W  W  P  F  C  F  C  S   : G  E  A  W  G  W  R  R  G  H  S  E  P  Y  L  T  I  L  G  S  C  N  R  Q  *  E  A  L  I  E  N  F  T  *  T  L  W  I  F  W  L  I  Q  C  Y  Y  I  T  F  N  F  P  V  S  G  L  I  *  S  V  Y  *  I  M  L  V  M  Y  K  H  L  V  F  I  S  S  Y  I  *  F  G  L  F  D  </first_frame>
            <second_frame>  F  I  S  P  V  P  L  R  Y  P  L  *  L  R  I  S  T  Q  M  A  S  S  D  H  H  M  N  D  H  H  H  H  H  H  H  D  H  D  H  N  H  E :   D  T  K  A  T  S  W  V  G  A  D  G  K  V  Y  H  S  H  D  G  L  A  P  H  S  H  E  P  I  Y  S  P  G  Y  F  S  R  R  A  P  P  L  N  D  R  N  F  S  E  R  A  F  T  I  G  I  G  G  P  V  G  T  G :   K  T  A  L  M  L  A  L  C  K  I  L  R  E  K  Y  S  L  A  A  :  V  T  N  D  I  F  T  K  E  D  G  E  F  L  I  K  H  G  A  L  P  E  E  R  I  R  A  V  E  T  G  G  C  P  H  A  A  I  R  E  D  I  S  I  N  L  G  P  L  E  E  L  S  N  L  Y  K  A  D  I  L  L  C  E  S  G  G   : D  N  L  A  A  N  F  S  R  E  L  A  D  Y  I  I  Y  I  I  D  V  S  A  G  D  K  I  P  R  K  G  G  P  G  I  T  Q  A  D  L  L  :  V  I  N  K  T  D  L  A  P  A  V  G  A  D  L  S  V  M  E  R  D  A  L  Q  M  R  D  G  G  P  F  V  F  A  Q  :  V  K  H  G  V  G  V  E  D  I  V  N  H  I  L  Q  S  W  E  V  A  T  G  N  K  K  R  *  L  K  T  S  L  E  H  C  G  S  F  G  L  S  S  A  I  I  *  H  S  I  S  L  F  L  D  *  Y  N  L  S  T  E  *  C  L  L  C  T  S  T  *  Y  L  *  V  P  I  F  N  L  V  C  L  I </second_frame>
            <third_frame>   L  S  P  L  Y  P  *  D  T  L  C  D  *  E  S  P  L  K  W  L  L  Q  T  T  I  *  M  T  T  T  T  I  I  I  M  T  M  T  I  T  M   : R  T  Q  K  R  H  H  G  *  E  Q  M  G  K  Y  T  I  V  M  M  G  W  L  L  T  L  M  N  L  F  I  H  L  A  T  L  A  E  G  H  L  H  L  M  T  G  I  S  V  K  E  P  L  L  L  E  L  V  A  L  L  V  L   : G  K  Q  L  *  C  W  H  Y  V  K  S  *  G  K  N  T  V  L  Q  Q :   *  Q  M  I  Y  S  R  K  K  M  E  S  S  *  *  N  M  V  H  C  R  R  K  G  F  E  Q  W  R  Q  E  D  A  H  M  L  L  L  G  K  I  *  A  L  T  L  D  L  L  R  S  F  L  I  C  T  K  Q  I  Y  Y  S  V  N  L  V  E  :  T  T  *  L  P  T  S  V  G  N  L  L  T  T  *  S  T  *  *  M  Y  L  R  V  T  K  F  L  E  K  E  V  P  E  L  H  K  Q  I  S  L :   *  *  I  R  P  T  W  H  Q  L  W  G  Q  I  C  P  S  W  S  V  M  H  F  R  C  G  M  V  A  L  L  F  L  L  R :   *  S  M  G  L  A  *  R  T  *  *  T  I  S  Y  N  P  G  K  L  Q  Q  A  I  R  S  A  N  *  K  L  H  L  N  I  V  D  L  L  A  Y  P  V  L  L  Y  N  I  Q  F  P  C  F  W  T  N  I  I  C  L  L  N  N  A  C  Y  V  Q  A  P  S  I  Y  K  F  L  Y  L  I  W  F  V  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6719" stop="6807"/>
                    <exon start="6892" stop="7080"/>
                    <exon start="7584" stop="7644"/>
                    <exon start="8188" stop="8389"/>
                    <exon start="8538" stop="8659"/>
                    <exon start="8764" stop="8868"/>
                    <exon start="10088" stop="10171"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRISTQMASSDHHMNDHHHHHHHDHDHNHEDTKATSWVGADGKVYHSHDGLAPHSHEPIYSPGYFSRRAPPLNDRNFSERAFTIGIGGPVGTGKTALMLALCKILREKYSLAAVTNDIFTKEDGEFLIKHGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYKADILLCESGGDNLAANFSRELADYIIYIIDVSAGDKIPRKGGPGITQADLLVINKTDLAPAVGADLSVMERDALQMRDGGPFVFAQVKHGVGVEDIVNHILQSWEVATGNKKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="12801" PGL_stop="15195"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12801" e_stop="13238"/>
            <exon e_start="14072" e_stop="14386"/>
            <exon e_start="15042" e_stop="15195"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="0.998"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="0.997"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="12801" e_stop="13238" e_length="438"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="13239" i_stop="14071" i_length="833"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="14072" e_stop="14386" e_length="315"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="14387" i_stop="15041" i_length="655"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="15042" e_stop="15195" e_length="154"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12801" stop="13238"/>
              <exon start="14072" stop="14386"/>
              <exon start="15042" stop="15195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCAATTCTAACCCTAAACCCAAACGACAGTGAGAAGAAGCAAAGGAACAACTCGAACCATCAAAAACCAATAGCAATCAATCAATCAATCAAACCCAAAAAGGTGTGCGTGTGTGGGTGCAGAGCAAGAAATCAATGGCGGAAGGTGGGGAGAAGAAGAGGGTTGTCGTGGAGTCGTTAGGATGGTTAACGGAATCCACCATCATGCCCAAAAAGATCCGACCAATTGAAGGCGTCGGTGCTTCTTCCATCCTTGAGCTTAAAGCCCAATTATACAAATCTCAAGAAGAGGCCAAACGCGTCGCCAAAGAGACCGTCCACCCTTCTGCTGCTGACCCGAATTATTCCCATCTAGAGATCCATCGTGCAAAGAGGAAGATAACTGCCAAGAACGTCTTTTCGTCTAAAAATCATGGGGTTGATGCCAGAGAGGCCAA : GGACAAGCTTGAGATGAAAGCAATCAAGGATGGTTCAGTAAGCTATGCTGCCTTAGAACGAAAGGCTAAGTTATATGATAAGCTGGTGAGGGGTGAGCTTTCTGATGGGGAGGAGGGAGAGAAGTACTGTGTTGACTTCTTTCGGAAGGGCCAGGAGCAGGAAGACTCTGAACAGCTTCAACGGCATGACATTTCTAACACAGAACCAAGAGATGAAGATGGAGATGATGATGCCTCCCTACTATCAGACACAAAAGCTGCAGGACTTGGCCAAGCTGGCACATTTGACCGAAGTGAACACAAGCGTTTCGTTAT : GGAAGTTCATAAAGAAGCAAGTCAAGCAAGGGAAAAAGCATCAGAACTCAAGCTACGTAGGCAAGAACAAGTAGCAGCACGTCGAGAAAAACTAAAGCAGGCTTATCTCCGCAAGCAGATTGAGAAATTGAAGGCTTCCAAGACAGAGCAGACA</gDNA_template>
            <first_frame> P  Q  F  *  P  *  T  Q  T  T  V  R  R  S  K  G  T  T  R  T  I  K  N  Q  *  Q  S  I  N  Q  S  N  P  K  R  C  A  C  V  G  A  E  Q  E  I  N  G  G  R  W  G  E  E  E  G  C  R  G  V  V  R  M  V  N  G  I  H  H  H  A  Q  K  D  P  T  N  *  R  R  R  C  F  F  H  P  *  A  *  S  P  I  I  Q  I  S  R  R  G  Q  T  R  R  Q  R  D  R  P  P  F  C  C  *  P  E  L  F  P  S  R  D  P  S  C  K  E  E  D  N  C  Q  E  R  L  F  V  *  K  S  W  G  *  C  Q  R  G  Q  :  G  Q  A  *  D  E  S  N  Q  G  W  F  S  K  L  C  C  L  R  T  K  G  *  V  I  *  *  A  G  E  G  *  A  F  *  W  G  G  G  R  E  V  L  C  *  L  L  S  E  G  P  G  A  G  R  L  *  T  A  S  T  A  *  H  F  *  H  R  T  K  R  *  R  W  R  *  *  C  L  P  T  I  R  H  K  S  C  R  T  W  P  S  W  H  I  *  P  K  *  T  Q  A  F  R  Y  :  G  S  S  *  R  S  K  S  S  K  G  K  S  I  R  T  Q  A  T  *  A  R  T  S  S  S  T  S  R  K  T  K  A  G  L  S  P  Q  A  D  *  E  I  E  G  F  Q  D  R  A  D  </first_frame>
            <second_frame>  L  N  S  N  P  K  P  K  R  Q  *  E  E  A  K  E  Q  L  E  P  S  K  T  N  S  N  Q  S  I  N  Q  T  Q  K  G  V  R  V  W  V  Q  S  K  K  S  M  A  E  G  G  E  K  K  R  V  V  V  E  S  L  G  W  L  T  E  S  T  I  M  P  K  K  I  R  P  I  E  G  V  G  A  S  S  I  L  E  L  K  A  Q  L  Y  K  S  Q  E  E  A  K  R  V  A  K  E  T  V  H  P  S  A  A  D  P  N  Y  S  H  L  E  I  H  R  A  K  R  K  I  T  A  K  N  V  F  S  S  K  N  H  G  V  D  A  R  E  A  K :   D  K  L  E  M  K  A  I  K  D  G  S  V  S  Y  A  A  L  E  R  K  A  K  L  Y  D  K  L  V  R  G  E  L  S  D  G  E  E  G  E  K  Y  C  V  D  F  F  R  K  G  Q  E  Q  E  D  S  E  Q  L  Q  R  H  D  I  S  N  T  E  P  R  D  E  D  G  D  D  D  A  S  L  L  S  D  T  K  A  A  G  L  G  Q  A  G  T  F  D  R  S  E  H  K  R  F  V  M :   E  V  H  K  E  A  S  Q  A  R  E  K  A  S  E  L  K  L  R  R  Q  E  Q  V  A  A  R  R  E  K  L  K  Q  A  Y  L  R  K  Q  I  E  K  L  K  A  S  K  T  E  Q  T </second_frame>
            <third_frame>   S  I  L  T  L  N  P  N  D  S  E  K  K  Q  R  N  N  S  N  H  Q  K  P  I  A  I  N  Q  S  I  K  P  K  K  V  C  V  C  G  C  R  A  R  N  Q  W  R  K  V  G  R  R  R  G  L  S  W  S  R  *  D  G  *  R  N  P  P  S  C  P  K  R  S  D  Q  L  K  A  S  V  L  L  P  S  L  S  L  K  P  N  Y  T  N  L  K  K  R  P  N  A  S  P  K  R  P  S  T  L  L  L  L  T  R  I  I  P  I  *  R  S  I  V  Q  R  G  R  *  L  P  R  T  S  F  R  L  K  I  M  G  L  M  P  E  R  P   : R  T  S  L  R  *  K  Q  S  R  M  V  Q  *  A  M  L  P  *  N  E  R  L  S  Y  M  I  S  W  *  G  V  S  F  L  M  G  R  R  E  R  S  T  V  L  T  S  F  G  R  A  R  S  R  K  T  L  N  S  F  N  G  M  T  F  L  T  Q  N  Q  E  M  K  M  E  M  M  M  P  P  Y  Y  Q  T  Q  K  L  Q  D  L  A  K  L  A  H  L  T  E  V  N  T  S  V  S  L   : W  K  F  I  K  K  Q  V  K  Q  G  K  K  H  Q  N  S  S  Y  V  G  K  N  K  *  Q  H  V  E  K  N  *  S  R  L  I  S  A  S  R  L  R  N  *  R  L  P  R  Q  S  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12835" stop="13238"/>
                    <exon start="14072" stop="14386"/>
                    <exon start="15042" stop="15195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEAKEQLEPSKTNSNQSINQTQKGVRVWVQSKKSMAEGGEKKRVVVESLGWLTESTIMPKKIRPIEGVGASSILELKAQLYKSQEEAKRVAKETVHPSAADPNYSHLEIHRAKRKITAKNVFSSKNHGVDAREAKDKLEMKAIKDGSVSYAALERKAKLYDKLVRGELSDGEEGEKYCVDFFRKGQEQEDSEQLQRHDISNTEPRDEDGDDDASLLSDTKAAGLGQAGTFDRSEHKRFVMEVHKEASQAREKASELKLRRQEQVAARREKLKQAYLRKQIEKLKASKTEQT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="16184" PGL_stop="17401"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16184" e_stop="16386"/>
            <exon e_start="16452" e_stop="17401"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.970"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="16184" e_stop="16386" e_length="203"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="16387" i_stop="16451" i_length="65"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="16452" e_stop="17401" e_length="950"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16184" stop="16386"/>
              <exon start="16452" stop="17401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563608" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGTTTTTGATGCTGCACTTCATTTTGAACAAACCCGTGAAGGATAGCGAATCCAAGCATCAGCTTTGGCAACTTAAAGACGGGATGCATCTAGCACCTTGAATTTCTGGACTTCCTTAGATGAAACCAAGTCGTTGCTTTATCAAGGAGTAGAGAGCTCAATCGTTATAGCAAATGCTCCTATGTAAACCCTAATTATGACG : TTTTTCGTTATTACACAGTTAAGAGGCTAAATTCAACAGATAATTACACTGTGGATGAGCAAAAGAAGGATAAGTAAGTATTAAAGAATACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTTCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCTTTGTTGCTACATTAGTTTAACTTTTAATTATTAATTGTGCCACATTAATTTAATTCCGTTAATTGGAAGAATTACTGTGTTTAGTATAAATAAGAGTATCATCTATCTAAATCAAACAACTGATATTTTCAAATTAAAATTCTATTGCAACCGGAAACTTCCAGAAGATGAGTCGGTGTAAATATATAAGTTGGACCAAAGAAATTACAGCAGCTAGCATTTCTGCAAAATCACTTCAATTTTAACAATTCTCCGAAATGCCTGAATCTCATTTACGCCGGCGGAGGTCACCACCGGAGGAGCGGCTTAGGGAGATAGAAGTTCTCATATACTCAGCAGAAGGCCTGAAGAACGTGAAGCACTTGACCAGGATGAGAACCTACGCCGAGGTCTACGTGGTGAAAGACGTCCACGTGGCAAAAACCAAAATAGCGGAGCACACCGGCGACGGAGACGACGGGACCAATCCAATATGGAACCAGGTGGTGAAGGTGAAATTTCACGAAAAGCTGCCGGAAAATGACATCATGGCGGCGTTAAACGTGGATATTTACGCTCACGGACACATTCGAGAGAAACCGGTGGGGAGCGCTCGAGTTTTGCTCTCCGATGTGTTGAAGGATACTAAATCGCCGGAATCGGAGATGCTGGAGAATAATCCGATCCAGTTTATGACAGTGTTAGTTTGGAGACCTTCTGGTAGGCCACAAGGTGTGCTCAACCTGTGGGTCCCACCTACAGGGCGGTTCCTGGTTCCGTTGACTTCGTTGTCGTTTAGCTTGAGGG</gDNA_template>
            <first_frame> V  F  L  M  L  H  F  I  L  N  K  P  V  K  D  S  E  S  K  H  Q  L  W  Q  L  K  D  G  M  H  L  A  P  *  I  S  G  L  P  *  M  K  P  S  R  C  F  I  K  E  *  R  A  Q  S  L  *  Q  M  L  L  C  K  P  *  L  *  R :   F  S  L  L  H  S  *  E  A  K  F  N  R  *  L  H  C  G  *  A  K  E  G  *  V  S  I  K  E  Y  D  S  T  G  D  R  T  Q  N  L  W  F  R  R  P  A  P  Y  P  L  G  H  G  V  F  V  A  T  L  V  *  L  L  I  I  N  C  A  T  L  I  *  F  R  *  L  E  E  L  L  C  L  V  *  I  R  V  S  S  I  *  I  K  Q  L  I  F  S  N  *  N  S  I  A  T  G  N  F  Q  K  M  S  R  C  K  Y  I  S  W  T  K  E  I  T  A  A  S  I  S  A  K  S  L  Q  F  *  Q  F  S  E  M  P  E  S  H  L  R  R  R  R  S  P  P  E  E  R  L  R  E  I  E  V  L  I  Y  S  A  E  G  L  K  N  V  K  H  L  T  R  M  R  T  Y  A  E  V  Y  V  V  K  D  V  H  V  A  K  T  K  I  A  E  H  T  G  D  G  D  D  G  T  N  P  I  W  N  Q  V  V  K  V  K  F  H  E  K  L  P  E  N  D  I  M  A  A  L  N  V  D  I  Y  A  H  G  H  I  R  E  K  P  V  G  S  A  R  V  L  L  S  D  V  L  K  D  T  K  S  P  E  S  E  M  L  E  N  N  P  I  Q  F  M  T  V  L  V  W  R  P  S  G  R  P  Q  G  V  L  N  L  W  V  P  P  T  G  R  F  L  V  P  L  T  S  L  S  F  S  L  R  </first_frame>
            <second_frame>  C  F  *  C  C  T  S  F  *  T  N  P  *  R  I  A  N  P  S  I  S  F  G  N  L  K  T  G  C  I  *  H  L  E  F  L  D  F  L  R  *  N  Q  V  V  A  L  S  R  S  R  E  L  N  R  Y  S  K  C  S  Y  V  N  P  N  Y  D   : V  F  R  Y  Y  T  V  K  R  L  N  S  T  D  N  Y  T  V  D  E  Q  K  K  D  K  *  V  L  K  N  T  T  P  L  G  I  E  P  R  I  S  G  F  V  D  Q  R  L  I  H  W  A  M  E  S  L  L  L  H  *  F  N  F  *  L  L  I  V  P  H  *  F  N  S  V  N  W  K  N  Y  C  V  *  Y  K  *  E  Y  H  L  S  K  S  N  N  *  Y  F  Q  I  K  I  L  L  Q  P  E  T  S  R  R  *  V  G  V  N  I  *  V  G  P  K  K  L  Q  Q  L  A  F  L  Q  N  H  F  N  F  N  N  S  P  K  C  L  N  L  I  Y  A  G  G  G  H  H  R  R  S  G  L  G  R  *  K  F  S  Y  T  Q  Q  K  A  *  R  T  *  S  T  *  P  G  *  E  P  T  P  R  S  T  W  *  K  T  S  T  W  Q  K  P  K  *  R  S  T  P  A  T  E  T  T  G  P  I  Q  Y  G  T  R  W  *  R  *  N  F  T  K  S  C  R  K  M  T  S  W  R  R  *  T  W  I  F  T  L  T  D  T  F  E  R  N  R  W  G  A  L  E  F  C  S  P  M  C  *  R  I  L  N  R  R  N  R  R  C  W  R  I  I  R  S  S  L  *  Q  C  *  F  G  D  L  L  V  G  H  K  V  C  S  T  C  G  S  H  L  Q  G  G  S  W  F  R  *  L  R  C  R  L  A  *  G </second_frame>
            <third_frame>   V  F  D  A  A  L  H  F  E  Q  T  R  E  G  *  R  I  Q  A  S  A  L  A  T  *  R  R  D  A  S  S  T  L  N  F  W  T  S  L  D  E  T  K  S  L  L  Y  Q  G  V  E  S  S  I  V  I  A  N  A  P  M  *  T  L  I  M  T  :  F  F  V  I  T  Q  L  R  G  *  I  Q  Q  I  I  T  L  W  M  S  K  R  R  I  S  K  Y  *  R  I  R  L  H  W  G  S  N  P  E  S  L  V  S  *  T  S  A  L  S  I  G  P  W  S  L  C  C  Y  I  S  L  T  F  N  Y  *  L  C  H  I  N  L  I  P  L  I  G  R  I  T  V  F  S  I  N  K  S  I  I  Y  L  N  Q  T  T  D  I  F  K  L  K  F  Y  C  N  R  K  L  P  E  D  E  S  V  *  I  Y  K  L  D  Q  R  N  Y  S  S  *  H  F  C  K  I  T  S  I  L  T  I  L  R  N  A  *  I  S  F  T  P  A  E  V  T  T  G  G  A  A  *  G  D  R  S  S  H  I  L  S  R  R  P  E  E  R  E  A  L  D  Q  D  E  N  L  R  R  G  L  R  G  E  R  R  P  R  G  K  N  Q  N  S  G  A  H  R  R  R  R  R  R  D  Q  S  N  M  E  P  G  G  E  G  E  I  S  R  K  A  A  G  K  *  H  H  G  G  V  K  R  G  Y  L  R  S  R  T  H  S  R  E  T  G  G  E  R  S  S  F  A  L  R  C  V  E  G  Y  *  I  A  G  I  G  D  A  G  E  *  S  D  P  V  Y  D  S  V  S  L  E  T  F  W  *  A  T  R  C  A  Q  P  V  G  P  T  Y  R  A  V  P  G  S  V  D  F  V  V  V  *  L  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16861" stop="17400"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QFSEMPESHLRRRRSPPEERLREIEVLIYSAEGLKNVKHLTRMRTYAEVYVVKDVHVAKTKIAEHTGDGDDGTNPIWNQVVKVKFHEKLPENDIMAALNVDIYAHGHIREKPVGSARVLLSDVLKDTKSPESEMLENNPIQFMTVLVWRPSGRPQGVLNLWVPPTGRFLVPLTSLSFSLR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="17640" PGL_stop="17380"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17640" e_stop="17380"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="17640" e_stop="17380" e_length="261"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17640" stop="17380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601578" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGCTAAAAACAAATTACCTCAATATAATATTATTTTATTCCTAATTTTGAATGGATCGTCAATTTTAATTTTGGGATTATGTGCTTTGTCAAAATTACAATTTTTAAGTAACAAATACAAACAAGTTTATTACATCCAAATGGTATCCATGCACAGCTGGAAGAGCCTTACACCTCACTGCTACTCTCCACCGCCGGCGTTTCCACCGTTACCACCTGATCCTCTTCGCCGTCTCTTCCCCTCAAGCTAAACGACAACGA</gDNA_template>
            <first_frame> R  L  K  T  N  Y  L  N  I  I  L  F  Y  S  *  F  *  M  D  R  Q  F  *  F  W  D  Y  V  L  C  Q  N  Y  N  F  *  V  T  N  T  N  K  F  I  T  S  K  W  Y  P  C  T  A  G  R  A  L  H  L  T  A  T  L  H  R  R  R  F  H  R  Y  H  L  I  L  F  A  V  S  S  P  Q  A  K  R  Q  R </first_frame>
            <second_frame>  G  *  K  Q  I  T  S  I  *  Y  Y  F  I  P  N  F  E  W  I  V  N  F  N  F  G  I  M  C  F  V  K  I  T  I  F  K  *  Q  I  Q  T  S  L  L  H  P  N  G  I  H  A  Q  L  E  E  P  Y  T  S  L  L  L  S  T  A  G  V  S  T  V  T  T  *  S  S  S  P  S  L  P  L  K  L  N  D  N   </second_frame>
            <third_frame>   A  K  N  K  L  P  Q  Y  N  I  I  L  F  L  I  L  N  G  S  S  I  L  I  L  G  L  C  A  L  S  K  L  Q  F  L  S  N  K  Y  K  Q  V  Y  Y  I  Q  M  V  S  M  H  S  W  K  S  L  T  P  H  C  Y  S  P  P  P  A  F  P  P  L  P  P  D  P  L  R  R  L  F  P  S  S  *  T  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17638" stop="17390"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKNKLPQYNIILFLILNGSSILILGLCALSKLQFLSNKYKQVYYIQMVSMHSWKSLTPHCYSPPPAFPPLPPDPLRRLFPSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="28865" PGL_stop="29249"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28865" e_stop="29249"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="28865" e_stop="29249" e_length="385"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28865" stop="29249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597494" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAAAGCAAGCCTTAGAGCTTCCGTAAGCCTTTTGGCATTACAGAGCGATTCAATGGATGATTTCAGGGGACGGAATTTAGGGATTGGGCTAAGCCAGTTCACTACATTTCTATACGTTCGATTCATCATTCTTTTGCATTTTTCCTTTCTCTTCAGAAAACCCGATACAGCAGATAAACTAAAAATGAAGAAGGAGAAGAGATACAAATAGCCTTCTTTTCAAGTTTTCCGCTACTTATTTCATTAGAGATGAACAGATAAATTTTTCACCAAATTTCAAAAAACAGTTGCTTAACCAATTGAAGAAGTTTGTTGCTTCTGGTAAACTAAGAGCTTCTACAAGCTTCGATCGACTCGGTCTGCAGCTACTAAACCTAATCGCT</gDNA_template>
            <first_frame> S  K  A  S  L  R  A  S  V  S  L  L  A  L  Q  S  D  S  M  D  D  F  R  G  R  N  L  G  I  G  L  S  Q  F  T  T  F  L  Y  V  R  F  I  I  L  L  H  F  S  F  L  F  R  K  P  D  T  A  D  K  L  K  M  K  K  E  K  R  Y  K  *  P  S  F  Q  V  F  R  Y  L  F  H  *  R  *  T  D  K  F  F  T  K  F  Q  K  T  V  A  *  P  I  E  E  V  C  C  F  W  *  T  K  S  F  Y  K  L  R  S  T  R  S  A  A  T  K  P  N  R  </first_frame>
            <second_frame>  Q  K  Q  A  L  E  L  P  *  A  F  W  H  Y  R  A  I  Q  W  M  I  S  G  D  G  I  *  G  L  G  *  A  S  S  L  H  F  Y  T  F  D  S  S  F  F  C  I  F  P  F  S  S  E  N  P  I  Q  Q  I  N  *  K  *  R  R  R  R  D  T  N  S  L  L  F  K  F  S  A  T  Y  F  I  R  D  E  Q  I  N  F  S  P  N  F  K  K  Q  L  L  N  Q  L  K  K  F  V  A  S  G  K  L  R  A  S  T  S  F  D  R  L  G  L  Q  L  L  N  L  I  A </second_frame>
            <third_frame>   K  S  K  P  *  S  F  R  K  P  F  G  I  T  E  R  F  N  G  *  F  Q  G  T  E  F  R  D  W  A  K  P  V  H  Y  I  S  I  R  S  I  H  H  S  F  A  F  F  L  S  L  Q  K  T  R  Y  S  R  *  T  K  N  E  E  G  E  E  I  Q  I  A  F  F  S  S  F  P  L  L  I  S  L  E  M  N  R  *  I  F  H  Q  I  S  K  N  S  C  L  T  N  *  R  S  L  L  L  L  V  N  *  E  L  L  Q  A  S  I  D  S  V  C  S  Y  *  T  *  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28865" stop="29077"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKASLRASVSLLALQSDSMDDFRGRNLGIGLSQFTTFLYVRFIILLHFSFLFRKPDTADKLKMKKEKRYK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29055" stop="29249"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRRRDTNSLLFKFSATYFIRDEQINFSPNFKKQLLNQLKKFVASGKLRASTSFDRLGLQLLNLIA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="44004" PGL_stop="40607"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44004" e_stop="43944"/>
            <exon e_start="43847" e_stop="43647"/>
            <exon e_start="42472" e_stop="42353"/>
            <exon e_start="41148" e_stop="40876"/>
            <exon e_start="40773" e_stop="40607"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.856" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44004" e_stop="43944" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43943" i_stop="43848" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="43847" e_stop="43647" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="43646" i_stop="42473" i_length="1174"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42472" e_stop="42353" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42352" i_stop="41149" i_length="1204"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41148" e_stop="40876" e_length="273"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.856">
            <gDNA_intron_boundary i_start="40875" i_stop="40774" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="40773" e_stop="40607" e_length="167"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44004" stop="43944"/>
              <exon start="43847" stop="43647"/>
              <exon start="42472" stop="42353"/>
              <exon start="41148" stop="40876"/>
              <exon start="40773" stop="40607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575037" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACCTCCATACATTCTCTGTCCACACTAAAAATCACATTTTTCCATCTTAAACCAACAAC : ATGGAAGGAAGTGAAATTAAGGAGGAAAAAGAAGCAGGTATTGGTCAGAAGAAGAAAATATTTGTTGCTGGTGCAACTGGGAACACAGGGAAGAGGATTGTTGAGCAGCTTTTGGCTAAGGGTTTTGCTGTTAAAGCTGGGGTTCGTGATGTTGACAAGGCTAAATCTGTTTTACCCGAAGCAAACCCTTTTCTTCAAATT : GTGAAAACCGATGTGACAGAGGGATCAGCTAAACTAGCCGATGCCATTGGTGATGATTCCAATGCGGTAATATGTGCTACAGGTTTCCAGCCTTCGTGGAACTTGTTGACACCTTGGAAG : GTTGATAATTTTGGCACAGTGAACCTTGTGGATGCATGCCAAAAACTTGGTATTGATAGGTTCATCCTTATAAGTTCAATTCTTGTCAATGGGGCTGCAATGGGTCAGTTGTTCAATCCAGTCTATATAATCCTTAATGTTATGGGACTCGTATTGGTAGCAAAGCTTCAAGCTGAGAGATACATTCGAAAATCTGGCATCAACTACACAATAATTCGGCCTGGTGGGCTAAAAAACGATCCTCCACAAGGGAATATAGTCATGCAACCAGAG : GATACTCTTTTTCGAGGCTCAATATCTAGAGATCAGGTAGCTGAAGTTGCAGTCGAGGCATTGCTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTGGCTAGTACCGATGCCCCTAAACGTTCATTCGAGGAACTCTTTGGTTCAATAGAACAACAGTGACT</gDNA_template>
            <first_frame> K  P  P  Y  I  L  C  P  H  *  K  S  H  F  S  I  L  N  Q  Q   : H  G  R  K  *  N  *  G  G  K  R  S  R  Y  W  S  E  E  E  N  I  C  C  W  C  N  W  E  H  R  E  E  D  C  *  A  A  F  G  *  G  F  C  C  *  S  W  G  S  *  C  *  Q  G  *  I  C  F  T  R  S  K  P  F  S  S  N   : C  E  N  R  C  D  R  G  I  S  *  T  S  R  C  H  W  *  *  F  Q  C  G  N  M  C  Y  R  F  P  A  F  V  E  L  V  D  T  L  E   : G  *  *  F  W  H  S  E  P  C  G  C  M  P  K  T  W  Y  *  *  V  H  P  Y  K  F  N  S  C  Q  W  G  C  N  G  S  V  V  Q  S  S  L  Y  N  P  *  C  Y  G  T  R  I  G  S  K  A  S  S  *  E  I  H  S  K  I  W  H  Q  L  H  N  N  S  A  W  W  A  K  K  R  S  S  T  R  E  Y  S  H  A  T  R   : G  Y  S  F  S  R  L  N  I  *  R  S  G  S  *  S  C  S  R  G  I  A  P  S  R  I  S  L  Q  S  R  G  D  S  G  *  Y  R  C  P  *  T  F  I  R  G  T  L  W  F  N  R  T  T  V  T </first_frame>
            <second_frame>  N  L  H  T  F  S  V  H  T  K  N  H  I  F  P  S  *  T  N  N  :  M  E  G  S  E  I  K  E  E  K  E  A  G  I  G  Q  K  K  K  I  F  V  A  G  A  T  G  N  T  G  K  R  I  V  E  Q  L  L  A  K  G  F  A  V  K  A  G  V  R  D  V  D  K  A  K  S  V  L  P  E  A  N  P  F  L  Q  I  :  V  K  T  D  V  T  E  G  S  A  K  L  A  D  A  I  G  D  D  S  N  A  V  I  C  A  T  G  F  Q  P  S  W  N  L  L  T  P  W  K  :  V  D  N  F  G  T  V  N  L  V  D  A  C  Q  K  L  G  I  D  R  F  I  L  I  S  S  I  L  V  N  G  A  A  M  G  Q  L  F  N  P  V  Y  I  I  L  N  V  M  G  L  V  L  V  A  K  L  Q  A  E  R  Y  I  R  K  S  G  I  N  Y  T  I  I  R  P  G  G  L  K  N  D  P  P  Q  G  N  I  V  M  Q  P  E  :  D  T  L  F  R  G  S  I  S  R  D  Q  V  A  E  V  A  V  E  A  L  L  H  P  E  S  H  Y  K  V  V  E  I  V  A  S  T  D  A  P  K  R  S  F  E  E  L  F  G  S  I  E  Q  Q  *   </second_frame>
            <third_frame>   T  S  I  H  S  L  S  T  L  K  I  T  F  F  H  L  K  P  T  T :   W  K  E  V  K  L  R  R  K  K  K  Q  V  L  V  R  R  R  K  Y  L  L  L  V  Q  L  G  T  Q  G  R  G  L  L  S  S  F  W  L  R  V  L  L  L  K  L  G  F  V  M  L  T  R  L  N  L  F  Y  P  K  Q  T  L  F  F  K  L :   *  K  P  M  *  Q  R  D  Q  L  N  *  P  M  P  L  V  M  I  P  M  R  *  Y  V  L  Q  V  S  S  L  R  G  T  C  *  H  L  G  R :   L  I  I  L  A  Q  *  T  L  W  M  H  A  K  N  L  V  L  I  G  S  S  L  *  V  Q  F  L  S  M  G  L  Q  W  V  S  C  S  I  Q  S  I  *  S  L  M  L  W  D  S  Y  W  *  Q  S  F  K  L  R  D  T  F  E  N  L  A  S  T  T  Q  *  F  G  L  V  G  *  K  T  I  L  H  K  G  I  *  S  C  N  Q  R :   I  L  F  F  E  A  Q  Y  L  E  I  R  *  L  K  L  Q  S  R  H  C  S  I  Q  N  L  I  T  K  S  W  R  *  W  L  V  P  M  P  L  N  V  H  S  R  N  S  L  V  Q  *  N  N  S  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43952" stop="43944"/>
                    <exon start="43847" stop="43647"/>
                    <exon start="42472" stop="42353"/>
                    <exon start="41148" stop="40876"/>
                    <exon start="40773" stop="40609"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>765</number_coding_nucleotides>
                  <number_encoded_amino_acids>255</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNNMEGSEIKEEKEAGIGQKKKIFVAGATGNTGKRIVEQLLAKGFAVKAGVRDVDKAKSVLPEANPFLQIVKTDVTEGSAKLADAIGDDSNAVICATGFQPSWNLLTPWKVDNFGTVNLVDACQKLGIDRFILISSILVNGAAMGQLFNPVYIILNVMGLVLVAKLQAERYIRKSGINYTIIRPGGLKNDPPQGNIVMQPEDTLFRGSISRDQVAEVAVEALLHPESHYKVVEIVASTDAPKRSFEELFGSIEQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="48178" PGL_stop="44793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48178" e_stop="48036"/>
            <exon e_start="47904" e_stop="47704"/>
            <exon e_start="47159" e_stop="47040"/>
            <exon e_start="45514" e_stop="45242"/>
            <exon e_start="45149" e_stop="44793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="0.993"/>
          <exon-intron don_prob="0.375" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="48178" e_stop="48036" e_length="143"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="48035" i_stop="47905" i_length="131"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47904" e_stop="47704" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.375" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47703" i_stop="47160" i_length="544"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47159" e_stop="47040" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="47039" i_stop="45515" i_length="1525"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="45514" e_stop="45242" e_length="273"/>
          </exon>
          <intron i_serial="4" don_prob="0.958" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45241" i_stop="45150" i_length="92"/>
          </intron>
          <exon e_serial="5" e_score="0.980">
            <gDNA_exon_boundary e_start="45149" e_stop="44793" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48178" stop="48036"/>
              <exon start="47904" stop="47704"/>
              <exon start="47159" stop="47040"/>
              <exon start="45514" stop="45242"/>
              <exon start="45149" stop="44793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575036" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGGGCTCGAGTAAGAAAAATCATGGCTACTGCCACTGGTCTCTTCTTCCTTAAAACATCGGCCTTTTCTATCACCTCTAAACGGCCCTCTGTTTCTCTTTTTGTCAATAAAGTTCACTCTTTTCGGCTCAGAGCAGCAAAT : ATAGAAGAAAGTGAAATTGAAGGAGAAGAGGAAGTGGGTATCAGTGAAAAGAAGAAAATATTTGTTGCTGGTGCGACTGGGAACACTGGGAAGAGGATTGTTGAGCAGCTTCTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTCTTGATGTTGATAAGGCTAAATCAACCTTACCGGGTCAAAACCCTGATCTTCAAATT : GTGAAAGCGGATGTCACAGAGGGATCAGTAAGACTAGCTGATGCCATTGGGAATGATTCAGATGCAGTAATATGTGCTACAGGATTTCGGCGTTCACTGGATTTTTTGGCTCCATGGAAG : GTTGATAACTTTGGCACAGTAAACCTTGTTGAAGCATGCCGAACACTTGGTGTTAAAAGATTCCTCCTCGTTAGTTCCATTCTGGTCAATGGAGCTGCAATGGGACAGTTGTTCAATCCAGCATATGTATTTCTCAATGTTCTTGGACTGACATTGATAGCAAAGCTCCAAGCAGAGCAATATATTCGAAGATCTGGCATCAATTACACAATAATAAGGCCTGGTGGGCTAAAAAACGATCCACCTCAAGGAAACATCGTAATGGAACAAGAG : GATACCCTTTACGAAGGCTCGATATCTAGAGATCAGGTAGCTGAAGTAGCAGTTGAGGCACTACTCCATCCAGAATCTCATTACAAAGTCGTGGAGATAGTAGCTCGTACTGATGCCCCTAAACGTTCATTCAAGGAATTATTTGGTTCTATAAAACAGCAGTAGCTTGTCAAGATGATGTTTTATGTCTATGTTTAAGCACACGATTTATAAATATAGTTACTCAAAGATCGTAGTGCAACAAATTTATATTGCAACATCCTTCTCTGCAATCTTGTAACAATGGAAGTGAATGATTGAAAGAGAGCTTATTGACCCCCGTTTCACGCGGGCGAAGGGTCTAAAGGATACGTAGCT</gDNA_template>
            <first_frame> Q  G  L  E  *  E  K  S  W  L  L  P  L  V  S  S  S  L  K  H  R  P  F  L  S  P  L  N  G  P  L  F  L  F  L  S  I  K  F  T  L  F  G  S  E  Q  Q  I :   *  K  K  V  K  L  K  E  K  R  K  W  V  S  V  K  R  R  K  Y  L  L  L  V  R  L  G  T  L  G  R  G  L  L  S  S  F  W  Q  R  V  L  L  L  R  L  G  F  L  M  L  I  R  L  N  Q  P  Y  R  V  K  T  L  I  F  K  L :   *  K  R  M  S  Q  R  D  Q  *  D  *  L  M  P  L  G  M  I  Q  M  Q  *  Y  V  L  Q  D  F  G  V  H  W  I  F  W  L  H  G  R :   L  I  T  L  A  Q  *  T  L  L  K  H  A  E  H  L  V  L  K  D  S  S  S  L  V  P  F  W  S  M  E  L  Q  W  D  S  C  S  I  Q  H  M  Y  F  S  M  F  L  D  *  H  *  *  Q  S  S  K  Q  S  N  I  F  E  D  L  A  S  I  T  Q  *  *  G  L  V  G  *  K  T  I  H  L  K  E  T  S  *  W  N  K  R :   I  P  F  T  K  A  R  Y  L  E  I  R  *  L  K  *  Q  L  R  H  Y  S  I  Q  N  L  I  T  K  S  W  R  *  *  L  V  L  M  P  L  N  V  H  S  R  N  Y  L  V  L  *  N  S  S  S  L  S  R  *  C  F  M  S  M  F  K  H  T  I  Y  K  Y  S  Y  S  K  I  V  V  Q  Q  I  Y  I  A  T  S  F  S  A  I  L  *  Q  W  K  *  M  I  E  R  E  L  I  D  P  R  F  T  R  A  K  G  L  K  D  T  *   </first_frame>
            <second_frame>  R  G  S  S  K  K  N  H  G  Y  C  H  W  S  L  L  P  *  N  I  G  L  F  Y  H  L  *  T  A  L  C  F  S  F  C  Q  *  S  S  L  F  S  A  Q  S  S  K   : Y  R  R  K  *  N  *  R  R  R  G  S  G  Y  Q  *  K  E  E  N  I  C  C  W  C  D  W  E  H  W  E  E  D  C  *  A  A  S  G  K  G  F  C  C  *  G  W  G  S  *  C  *  *  G  *  I  N  L  T  G  S  K  P  *  S  S  N   : C  E  S  G  C  H  R  G  I  S  K  T  S  *  C  H  W  E  *  F  R  C  S  N  M  C  Y  R  I  S  A  F  T  G  F  F  G  S  M  E   : G  *  *  L  W  H  S  K  P  C  *  S  M  P  N  T  W  C  *  K  I  P  P  R  *  F  H  S  G  Q  W  S  C  N  G  T  V  V  Q  S  S  I  C  I  S  Q  C  S  W  T  D  I  D  S  K  A  P  S  R  A  I  Y  S  K  I  W  H  Q  L  H  N  N  K  A  W  W  A  K  K  R  S  T  S  R  K  H  R  N  G  T  R   : G  Y  P  L  R  R  L  D  I  *  R  S  G  S  *  S  S  S  *  G  T  T  P  S  R  I  S  L  Q  S  R  G  D  S  S  S  Y  *  C  P  *  T  F  I  Q  G  I  I  W  F  Y  K  T  A  V  A  C  Q  D  D  V  L  C  L  C  L  S  T  R  F  I  N  I  V  T  Q  R  S  *  C  N  K  F  I  L  Q  H  P  S  L  Q  S  C  N  N  G  S  E  *  L  K  E  S  L  L  T  P  V  S  R  G  R  R  V  *  R  I  R  S  </second_frame>
            <third_frame>   G  A  R  V  R  K  I  M  A  T  A  T  G  L  F  F  L  K  T  S  A  F  S  I  T  S  K  R  P  S  V  S  L  F  V  N  K  V  H  S  F  R  L  R  A  A  N  :  I  E  E  S  E  I  E  G  E  E  E  V  G  I  S  E  K  K  K  I  F  V  A  G  A  T  G  N  T  G  K  R  I  V  E  Q  L  L  A  K  G  F  A  V  K  A  G  V  L  D  V  D  K  A  K  S  T  L  P  G  Q  N  P  D  L  Q  I  :  V  K  A  D  V  T  E  G  S  V  R  L  A  D  A  I  G  N  D  S  D  A  V  I  C  A  T  G  F  R  R  S  L  D  F  L  A  P  W  K  :  V  D  N  F  G  T  V  N  L  V  E  A  C  R  T  L  G  V  K  R  F  L  L  V  S  S  I  L  V  N  G  A  A  M  G  Q  L  F  N  P  A  Y  V  F  L  N  V  L  G  L  T  L  I  A  K  L  Q  A  E  Q  Y  I  R  R  S  G  I  N  Y  T  I  I  R  P  G  G  L  K  N  D  P  P  Q  G  N  I  V  M  E  Q  E  :  D  T  L  Y  E  G  S  I  S  R  D  Q  V  A  E  V  A  V  E  A  L  L  H  P  E  S  H  Y  K  V  V  E  I  V  A  R  T  D  A  P  K  R  S  F  K  E  L  F  G  S  I  K  Q  Q  *  L  V  K  M  M  F  Y  V  Y  V  *  A  H  D  L  *  I  *  L  L  K  D  R  S  A  T  N  L  Y  C  N  I  L  L  C  N  L  V  T  M  E  V  N  D  *  K  R  A  Y  *  P  P  F  H  A  G  E  G  S  K  G  Y  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48176" stop="48036"/>
                    <exon start="47904" stop="47704"/>
                    <exon start="47159" stop="47040"/>
                    <exon start="45514" stop="45242"/>
                    <exon start="45149" stop="44985"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>897</number_coding_nucleotides>
                  <number_encoded_amino_acids>299</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GARVRKIMATATGLFFLKTSAFSITSKRPSVSLFVNKVHSFRLRAANIEESEIEGEEEVGISEKKKIFVAGATGNTGKRIVEQLLAKGFAVKAGVLDVDKAKSTLPGQNPDLQIVKADVTEGSVRLADAIGNDSDAVICATGFRRSLDFLAPWKVDNFGTVNLVEACRTLGVKRFLLVSSILVNGAAMGQLFNPAYVFLNVLGLTLIAKLQAEQYIRRSGINYTIIRPGGLKNDPPQGNIVMEQEDTLYEGSISRDQVAEVAVEALLHPESHYKVVEIVARTDAPKRSFKELFGSIKQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="52581" PGL_stop="49348"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52581" e_stop="52483"/>
            <exon e_start="52274" e_stop="52120"/>
            <exon e_start="52049" e_stop="51841"/>
            <exon e_start="51753" e_stop="51588"/>
            <exon e_start="51502" e_stop="51306"/>
            <exon e_start="51112" e_stop="51053"/>
            <exon e_start="50968" e_stop="50876"/>
            <exon e_start="50635" e_stop="50415"/>
            <exon e_start="50166" e_stop="50089"/>
            <exon e_start="49998" e_stop="49857"/>
            <exon e_start="49699" e_stop="49633"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.965" e_score="0.990"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.994"/>
          <exon-intron don_prob="0.983" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.672" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="0.994"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.941" e_score="0.986"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="52581" e_stop="52483" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.965">
            <gDNA_intron_boundary i_start="52482" i_stop="52275" i_length="208"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="52274" e_stop="52120" e_length="155"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="52119" i_stop="52050" i_length="70"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52049" e_stop="51841" e_length="209"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.997">
            <gDNA_intron_boundary i_start="51840" i_stop="51754" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51753" e_stop="51588" e_length="166"/>
          </exon>
          <intron i_serial="4" don_prob="0.672" acc_prob="0.978">
            <gDNA_intron_boundary i_start="51587" i_stop="51503" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="51502" e_stop="51306" e_length="197"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51305" i_stop="51113" i_length="193"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51112" e_stop="51053" e_length="60"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51052" i_stop="50969" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50968" e_stop="50876" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="50875" i_stop="50636" i_length="240"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="50635" e_stop="50415" e_length="221"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="50414" i_stop="50167" i_length="248"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="50166" e_stop="50089" e_length="78"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.952">
            <gDNA_intron_boundary i_start="50088" i_stop="49999" i_length="90"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="49998" e_stop="49857" e_length="142"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.941">
            <gDNA_intron_boundary i_start="49856" i_stop="49700" i_length="157"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="49699" e_stop="49633" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52581" stop="52483"/>
              <exon start="52274" stop="52120"/>
              <exon start="52049" stop="51841"/>
              <exon start="51753" stop="51588"/>
              <exon start="51502" stop="51364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570383" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51466" stop="51306"/>
              <exon start="51112" stop="51053"/>
              <exon start="50968" stop="50876"/>
              <exon start="50635" stop="50415"/>
              <exon start="50166" stop="50089"/>
              <exon start="49998" stop="49857"/>
              <exon start="49699" stop="49633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595753" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCATCTATTTATGGGCATTTGTGGATAAAGAAAGCAGTTGTTCTGCTCATGCTTGGTGGAATTGAAAAGAACTTGAAAAATGGGACTCACTTAAGAGG : TGATATAAACATGATGATGGTTGGTGATCCATCTGTTGCCAAGTCTCAGCTGCTGAGAGCAATTATGAATATTGCTCCGTTAGCAATATCAACTACTGGTCGTGGTTCTTCCGGAGTTGGTTTGACAGCTGCAGTTACTTCTGATCAAGAAACAG : GAGAAAGAAGGCTAGAAGCTGGTGCCATGGTACTTGCTGACAGAGGTGTTGTTTGCATTGATGAGTTTGATAAAATGAATGACCAAGATCGAGTTGCCATACATGAGGTTATGGAACAGCAGACTGTAACCATTGCTAAAGCAGGAATTCATGCATCCTTGAATGCTCGATGCAGTGTAGTTGCAGCTGCAAATCCCATATATGGTTCT : TACGACCGATCATTAACTCCAACAAAGAACATTGGACTTCCAGACTCACTGCTCTCTCGTTTTGATTTGTTGTTTATTGTTCTGGATCAAATGGATCCTGGGGTTGATCGTCAAATTTCTGAGCATGTTCTGCGCATGCATCGGTATCGTTCTCCAATAGATGGAG : GTAGCTCAACACTAGATAATGATTCAAGATATGAAGAGCAAAATGACAAGGATGAAATGCCCGTCTATGTTAAGTATAATCGGATGCTACATGGTAGAAATTCTACTCGGAGCAAGAAGGATACATTGACCATCCAGTTTCTCAAGACTTACATTCATTATGCAAAAAACAGGATCCATCCTGAGCTGACTGATGAG : GCATCTGATAACATAGCTACTGCTTATGCCGAGCTTAGGAGTGCCAGTTCGAATGCAAAG : ACTGGGGGAGGAACACTTCCGATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAG : GTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGATGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGG : TGTTCTTTTGGAAAGTGGTAGTGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAG : ATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCAACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTAAAG : ATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCG</gDNA_template>
            <first_frame> T  I  Y  L  W  A  F  V  D  K  E  S  S  C  S  A  H  A  W  W  N  *  K  E  L  E  K  W  D  S  L  K  R  :  *  Y  K  H  D  D  G  W  *  S  I  C  C  Q  V  S  A  A  E  S  N  Y  E  Y  C  S  V  S  N  I  N  Y  W  S  W  F  F  R  S  W  F  D  S  C  S  Y  F  *  S  R  N  R :   R  K  K  A  R  S  W  C  H  G  T  C  *  Q  R  C  C  L  H  *  *  V  *  *  N  E  *  P  R  S  S  C  H  T  *  G  Y  G  T  A  D  C  N  H  C  *  S  R  N  S  C  I  L  E  C  S  M  Q  C  S  C  S  C  K  S  H  I  W  F   : L  R  P  I  I  N  S  N  K  E  H  W  T  S  R  L  T  A  L  S  F  *  F  V  V  Y  C  S  G  S  N  G  S  W  G  *  S  S  N  F  *  A  C  S  A  H  A  S  V  S  F  S  N  R  W  R :   *  L  N  T  R  *  *  F  K  I  *  R  A  K  *  Q  G  *  N  A  R  L  C  *  V  *  S  D  A  T  W  *  K  F  Y  S  E  Q  E  G  Y  I  D  H  P  V  S  Q  D  L  H  S  L  C  K  K  Q  D  P  S  *  A  D  *  *   : G  I  *  *  H  S  Y  C  L  C  R  A  *  E  C  Q  F  E  C  K   : D  W  G  R  N  T  S  D  Y  C  Q  N  F  G  N  N  Y  S  A  L  N  C  P  C  Q  A  E  V  E  K  T   : G  F  E  V  *  C  R  S  C  S  S  S  S  T  F  C  H  I  S  S  R  T  D  *  D  G  G  T  *  T  R  E  S  K  G  I  G  E  E  A  Q  Y  *  P  *  W  R  *  Q  C  F  S  S  *  T  Q  S  R  A  *  C  R  *  *  I  S  *  S  *  S  R  R  S  R  :  C  S  F  G  K  W  *  *  S  D  G  N  *  *  Y  S  S  S  *  D  Q  H  I  S  *  E  :  I  A  S  I  Q  C  S  T  W  *  A  Q  E  L  T  T  C  G  T  N  S  S  C  *  C  G  E  C  C  Q  Q  W  G  D  C  T  L  L  K  G  G  D  R  E  I  I  K   : D  D  G  R  E  R  P  I  V  G  T  Q  *  Y  Q  C  S  L  L  H  V  N   </first_frame>
            <second_frame>  P  S  I  Y  G  H  L  W  I  K  K  A  V  V  L  L  M  L  G  G  I  E  K  N  L  K  N  G  T  H  L  R  G :   D  I  N  M  M  M  V  G  D  P  S  V  A  K  S  Q  L  L  R  A  I  M  N  I  A  P  L  A  I  S  T  T  G  R  G  S  S  G  V  G  L  T  A  A  V  T  S  D  Q  E  T   : G  E  R  R  L  E  A  G  A  M  V  L  A  D  R  G  V  V  C  I  D  E  F  D  K  M  N  D  Q  D  R  V  A  I  H  E  V  M  E  Q  Q  T  V  T  I  A  K  A  G  I  H  A  S  L  N  A  R  C  S  V  V  A  A  A  N  P  I  Y  G  S  :  Y  D  R  S  L  T  P  T  K  N  I  G  L  P  D  S  L  L  S  R  F  D  L  L  F  I  V  L  D  Q  M  D  P  G  V  D  R  Q  I  S  E  H  V  L  R  M  H  R  Y  R  S  P  I  D  G   : G  S  S  T  L  D  N  D  S  R  Y  E  E  Q  N  D  K  D  E  M  P  V  Y  V  K  Y  N  R  M  L  H  G  R  N  S  T  R  S  K  K  D  T  L  T  I  Q  F  L  K  T  Y  I  H  Y  A  K  N  R  I  H  P  E  L  T  D  E  :  A  S  D  N  I  A  T  A  Y  A  E  L  R  S  A  S  S  N  A  K  :  T  G  G  G  T  L  P  I  T  A  R  T  L  E  T  I  I  R  L  S  T  A  H  A  K  L  K  L  R  R  Q  :  V  L  K  S  D  V  E  A  A  L  Q  V  L  H  F  A  I  Y  H  Q  E  L  T  E  M  E  E  R  E  Q  E  R  A  K  E  L  G  K  K  R  S  T  D  H  D  G  G  N  N  A  S  A  R  K  R  R  A  E  H  D  A  D  D  E  S  A  D  H  E  A  G  G  V  G :   V  L  L  E  S  G  S  E  A  M  E  T  D  D  T  P  A  A  E  I  S  T  S  P  E  R :   L  Q  A  F  S  A  A  L  G  R  H  R  N  L  Q  H  V  E  Q  I  P  V  A  D  V  E  N  V  V  N  N  G  A  T  V  P  Y  S  K  A  E  I  E  K  L  L  K  :  M  M  E  E  K  G  Q  L  W  V  H  S  D  T  N  V  V  Y  F  M  *  I  </second_frame>
            <third_frame>   H  L  F  M  G  I  C  G  *  R  K  Q  L  F  C  S  C  L  V  E  L  K  R  T  *  K  M  G  L  T  *  E   : V  I  *  T  *  *  W  L  V  I  H  L  L  P  S  L  S  C  *  E  Q  L  *  I  L  L  R  *  Q  Y  Q  L  L  V  V  V  L  P  E  L  V  *  Q  L  Q  L  L  L  I  K  K  Q  :  E  K  E  G  *  K  L  V  P  W  Y  L  L  T  E  V  L  F  A  L  M  S  L  I  K  *  M  T  K  I  E  L  P  Y  M  R  L  W  N  S  R  L  *  P  L  L  K  Q  E  F  M  H  P  *  M  L  D  A  V  *  L  Q  L  Q  I  P  Y  M  V  L :   T  T  D  H  *  L  Q  Q  R  T  L  D  F  Q  T  H  C  S  L  V  L  I  C  C  L  L  F  W  I  K  W  I  L  G  L  I  V  K  F  L  S  M  F  C  A  C  I  G  I  V  L  Q  *  M  E  :  V  A  Q  H  *  I  M  I  Q  D  M  K  S  K  M  T  R  M  K  C  P  S  M  L  S  I  I  G  C  Y  M  V  E  I  L  L  G  A  R  R  I  H  *  P  S  S  F  S  R  L  T  F  I  M  Q  K  T  G  S  I  L  S  *  L  M  R :   H  L  I  T  *  L  L  L  M  P  S  L  G  V  P  V  R  M  Q  R :   L  G  E  E  H  F  R  L  L  P  E  L  W  K  Q  L  F  G  S  Q  L  P  M  P  S  *  S  *  E  D  R :   F  *  S  L  M  *  K  L  L  F  K  F  Y  I  L  P  Y  I  I  K  N  *  L  R  W  R  N  V  N  K  R  E  Q  R  N  W  G  R  S  A  V  L  T  M  M  E  V  T  M  L  Q  L  V  N  A  E  P  S  M  M  Q  M  M  N  Q  L  I  M  K  P  E  E  *   : V  F  F  W  K  V  V  V  K  R  W  K  L  M  I  L  Q  Q  L  R  S  A  H  L  L  R   : D  C  K  H  S  V  Q  H  L  V  G  T  G  T  Y  N  M  W  N  K  F  Q  L  L  M  W  R  M  L  S  T  M  G  R  L  Y  L  T  Q  R  R  R  *  R  N  Y  *  R :   *  W  K  R  K  A  N  C  G  Y  T  V  I  P  M  *  F  T  S  C  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52580" stop="52483"/>
                    <exon start="52274" stop="52120"/>
                    <exon start="52049" stop="51841"/>
                    <exon start="51753" stop="51588"/>
                    <exon start="51502" stop="51306"/>
                    <exon start="51112" stop="51053"/>
                    <exon start="50968" stop="50876"/>
                    <exon start="50635" stop="50415"/>
                    <exon start="50166" stop="50089"/>
                    <exon start="49998" stop="49857"/>
                    <exon start="49699" stop="49637"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1479</number_coding_nucleotides>
                  <number_encoded_amino_acids>493</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSIYGHLWIKKAVVLLMLGGIEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGSYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPGVDRQISEHVLRMHRYRSPIDGGSSTLDNDSRYEEQNDKDEMPVYVKYNRMLHGRNSTRSKKDTLTIQFLKTYIHYAKNRIHPELTDEASDNIATAYAELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDADDESADHEAGGVGVLLESGSEAMETDDTPAAEISTSPERLQAFSAALGRHRNLQHVEQIPVADVENVVNNGATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVYFM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="51084" e_stop="51053"/>
            <exon e_start="50968" e_stop="50876"/>
            <exon e_start="50635" e_stop="50415"/>
            <exon e_start="50145" e_stop="50089"/>
            <exon e_start="49998" e_stop="49857"/>
            <exon e_start="49699" e_stop="49348"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.969"/>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="1.000" acc_prob="0.985" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="51084" e_stop="51053" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51052" i_stop="50969" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="50968" e_stop="50876" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="50875" i_stop="50636" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="50635" e_stop="50415" e_length="221"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="50414" i_stop="50146" i_length="269"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50145" e_stop="50089" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.952">
            <gDNA_intron_boundary i_start="50088" i_stop="49999" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="49998" e_stop="49857" e_length="142"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.941">
            <gDNA_intron_boundary i_start="49856" i_stop="49700" i_length="157"/>
          </intron>
          <exon e_serial="6" e_score="0.991">
            <gDNA_exon_boundary e_start="49699" e_stop="49348" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51084" stop="51053"/>
              <exon start="50968" stop="50876"/>
              <exon start="50635" stop="50415"/>
              <exon start="50145" stop="50089"/>
              <exon start="49998" stop="49857"/>
              <exon start="49699" stop="49348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570382" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGAGCTTAGGAGTGCCAGTTCGAATGCAAAG : ACTGGGGGAGGAACACTTCCGATTACTGCCAGAACTTTGGAAACAATTATTCGGCTCTCAACTGCCCATGCCAAGCTGAAGTTGAGAAGACAG : GTTTTGAAGTCTGATGTAGAAGCTGCTCTTCAAGTTCTACATTTTGCCATATATCATCAAGAACTGACTGAGATGGAGGAACGTGAACAAGAGAGAGCAAAGGAATTGGGGAAGAAGCGCAGTACTGACCATGATGGAGGTAACAATGCTTCAGCTCGTAAACGCAGAGCCGAGCATGATGCAGATGATGAATCAGCTGATCATGAAGCCGGAGGAGTAGG : TGAAGCGATGGAAACTGATGATACTCCAGCAGCTGAGATCAGCACATCTCCTGAGAG : ATTGCAAGCATTCAGTGCAGCACTTGGTAGGCACAGGAACTTACAACATGTGGAACAAATTCCAGTTGCTGATGTGGAGAATGTTGTCAACAATGGGGCGACTGTACCTTACTCAAAGGCGGAGATAGAGAAATTATTAAAG : ATGATGGAAGAGAAAGGCCAATTGTGGGTACACAGTGATACCAATGTAGTTTACTTCATGTAAATCGGTCCAATTGGAGCGCTCGCAAGTTCAGTTGTCTCCTTTCTGATGGATTGTCCAAGCCTAACTAAATGGGGGGATACACCATTTGTTATTGAACCATAGCTTCTCTTTATGTTTCTGATAGTATTATGGTATTCATCTATTTATCCCCACTTTGATATTCAGGATCTGATGAAGCACATGAATCTTACTTTTTCTGTTTTAGGGAAAAACTAAATGGTTAATGCATTATGTAATATACAATTTATGATGATCGTCTCTTTCAATTGAAAAGTTGCAATTCACGTTA</gDNA_template>
            <first_frame> P  S  L  G  V  P  V  R  M  Q  R :   L  G  E  E  H  F  R  L  L  P  E  L  W  K  Q  L  F  G  S  Q  L  P  M  P  S  *  S  *  E  D  R :   F  *  S  L  M  *  K  L  L  F  K  F  Y  I  L  P  Y  I  I  K  N  *  L  R  W  R  N  V  N  K  R  E  Q  R  N  W  G  R  S  A  V  L  T  M  M  E  V  T  M  L  Q  L  V  N  A  E  P  S  M  M  Q  M  M  N  Q  L  I  M  K  P  E  E  *   : V  K  R  W  K  L  M  I  L  Q  Q  L  R  S  A  H  L  L  R   : D  C  K  H  S  V  Q  H  L  V  G  T  G  T  Y  N  M  W  N  K  F  Q  L  L  M  W  R  M  L  S  T  M  G  R  L  Y  L  T  Q  R  R  R  *  R  N  Y  *  R :   *  W  K  R  K  A  N  C  G  Y  T  V  I  P  M  *  F  T  S  C  K  S  V  Q  L  E  R  S  Q  V  Q  L  S  P  F  *  W  I  V  Q  A  *  L  N  G  G  I  H  H  L  L  L  N  H  S  F  S  L  C  F  *  *  Y  Y  G  I  H  L  F  I  P  T  L  I  F  R  I  *  *  S  T  *  I  L  L  F  L  F  *  G  K  T  K  W  L  M  H  Y  V  I  Y  N  L  *  *  S  S  L  S  I  E  K  L  Q  F  T  L </first_frame>
            <second_frame>  R  A  *  E  C  Q  F  E  C  K   : D  W  G  R  N  T  S  D  Y  C  Q  N  F  G  N  N  Y  S  A  L  N  C  P  C  Q  A  E  V  E  K  T   : G  F  E  V  *  C  R  S  C  S  S  S  S  T  F  C  H  I  S  S  R  T  D  *  D  G  G  T  *  T  R  E  S  K  G  I  G  E  E  A  Q  Y  *  P  *  W  R  *  Q  C  F  S  S  *  T  Q  S  R  A  *  C  R  *  *  I  S  *  S  *  S  R  R  S  R  :  *  S  D  G  N  *  *  Y  S  S  S  *  D  Q  H  I  S  *  E  :  I  A  S  I  Q  C  S  T  W  *  A  Q  E  L  T  T  C  G  T  N  S  S  C  *  C  G  E  C  C  Q  Q  W  G  D  C  T  L  L  K  G  G  D  R  E  I  I  K   : D  D  G  R  E  R  P  I  V  G  T  Q  *  Y  Q  C  S  L  L  H  V  N  R  S  N  W  S  A  R  K  F  S  C  L  L  S  D  G  L  S  K  P  N  *  M  G  G  Y  T  I  C  Y  *  T  I  A  S  L  Y  V  S  D  S  I  M  V  F  I  Y  L  S  P  L  *  Y  S  G  S  D  E  A  H  E  S  Y  F  F  C  F  R  E  K  L  N  G  *  C  I  M  *  Y  T  I  Y  D  D  R  L  F  Q  L  K  S  C  N  S  R   </second_frame>
            <third_frame>   E  L  R  S  A  S  S  N  A  K  :  T  G  G  G  T  L  P  I  T  A  R  T  L  E  T  I  I  R  L  S  T  A  H  A  K  L  K  L  R  R  Q  :  V  L  K  S  D  V  E  A  A  L  Q  V  L  H  F  A  I  Y  H  Q  E  L  T  E  M  E  E  R  E  Q  E  R  A  K  E  L  G  K  K  R  S  T  D  H  D  G  G  N  N  A  S  A  R  K  R  R  A  E  H  D  A  D  D  E  S  A  D  H  E  A  G  G  V  G :   E  A  M  E  T  D  D  T  P  A  A  E  I  S  T  S  P  E  R :   L  Q  A  F  S  A  A  L  G  R  H  R  N  L  Q  H  V  E  Q  I  P  V  A  D  V  E  N  V  V  N  N  G  A  T  V  P  Y  S  K  A  E  I  E  K  L  L  K  :  M  M  E  E  K  G  Q  L  W  V  H  S  D  T  N  V  V  Y  F  M  *  I  G  P  I  G  A  L  A  S  S  V  V  S  F  L  M  D  C  P  S  L  T  K  W  G  D  T  P  F  V  I  E  P  *  L  L  F  M  F  L  I  V  L  W  Y  S  S  I  Y  P  H  F  D  I  Q  D  L  M  K  H  M  N  L  T  F  S  V  L  G  K  N  *  M  V  N  A  L  C  N  I  Q  F  M  M  I  V  S  F  N  *  K  V  A  I  H  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51082" stop="51053"/>
                    <exon start="50968" stop="50876"/>
                    <exon start="50635" stop="50415"/>
                    <exon start="50145" stop="50089"/>
                    <exon start="49998" stop="49857"/>
                    <exon start="49699" stop="49637"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELRSASSNAKTGGGTLPITARTLETIIRLSTAHAKLKLRRQVLKSDVEAALQVLHFAIYHQELTEMEEREQERAKELGKKRSTDHDGGNNASARKRRAEHDADDESADHEAGGVGEAMETDDTPAAEISTSPERLQAFSAALGRHRNLQHVEQIPVADVENVVNNGATVPYSKAEIEKLLKMMEEKGQLWVHSDTNVVYFM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="55844" PGL_stop="52891"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55844" e_stop="55722"/>
            <exon e_start="55587" e_stop="55469"/>
            <exon e_start="55188" e_stop="54980"/>
            <exon e_start="53269" e_stop="53139"/>
            <exon e_start="53052" e_stop="52891"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.959"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.917" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.943" e_score="0.992"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="55844" e_stop="55722" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="55721" i_stop="55588" i_length="134"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55587" e_stop="55469" e_length="119"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="55468" i_stop="55189" i_length="280"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55188" e_stop="54980" e_length="209"/>
          </exon>
          <intron i_serial="3" don_prob="0.917" acc_prob="0.982">
            <gDNA_intron_boundary i_start="54979" i_stop="53270" i_length="1710"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="53269" e_stop="53139" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.909" acc_prob="0.943">
            <gDNA_intron_boundary i_start="53138" i_stop="53053" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="53052" e_stop="52891" e_length="162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55844" stop="55722"/>
              <exon start="55587" stop="55469"/>
              <exon start="55188" stop="54980"/>
              <exon start="53269" stop="53139"/>
              <exon start="53052" stop="52891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575095" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTCCTCCATTTCTCTCTCTCTCTCACACAGAGATTAACACTTACTCAGTCAGCCATGGATCTAAGCGACGAGGTTAGGGCTACGCATAAGCGAACTTTCCTCAAGTTCTTCGAACAAACT : GAACTGGACACGGAGCTGAAGAAGGAATTTGAATCTATGATCAACAACAATAGGCGTCGTGTCATTATGGACCTCGCTGATTTCTACAATGACAGAGAAGGCTCTGATTTGGCTCGCAG : GCTTCTTCAGAATCCTAGTGAGTATATGCAACCGTTGATTGATGCTTTAACCGATATGATCCGGACCCATAATCCCAAGTACCTTAAAGAAGGCGAGCAAGTCTTGGTTGGGTTTACTGGTCCTTTTGTTTCGAGGAGAGTAACCCCAAGAGAGCTGTTGTCCCGTTTCATTGGTTCCATGGTTTGCGTTGAAGGCATTGTTACCAAGT : GTTCTCTTGTGAGGCCAAAGGTTGTAAAGAGCGTCCACTTTTGTCCGACAACTGAGAAATTTACGGCCCGTGAATACAGAGATATCACATCGAATGTTGGTCTGCCAACTGGTTCTGTGTACCCGACACGG : GATGATAATGGCAATTTGCTAGTTACTGAGTACGGTTTATGCACATACAAAGATCATCAAACTTTATCAATGCAAGAGGTGCCTGAAAATTCTGCTCCTGGTCAACTTCCTAGAACAGTGGATATAGTCGTAGAGGATGATCTTGTTGATTCATGCAAGCCT</gDNA_template>
            <first_frame> S  L  L  H  F  S  L  S  L  T  Q  R  L  T  L  T  Q  S  A  M  D  L  S  D  E  V  R  A  T  H  K  R  T  F  L  K  F  F  E  Q  T  :  E  L  D  T  E  L  K  K  E  F  E  S  M  I  N  N  N  R  R  R  V  I  M  D  L  A  D  F  Y  N  D  R  E  G  S  D  L  A  R  R :   L  L  Q  N  P  S  E  Y  M  Q  P  L  I  D  A  L  T  D  M  I  R  T  H  N  P  K  Y  L  K  E  G  E  Q  V  L  V  G  F  T  G  P  F  V  S  R  R  V  T  P  R  E  L  L  S  R  F  I  G  S  M  V  C  V  E  G  I  V  T  K   : C  S  L  V  R  P  K  V  V  K  S  V  H  F  C  P  T  T  E  K  F  T  A  R  E  Y  R  D  I  T  S  N  V  G  L  P  T  G  S  V  Y  P  T  R  :  D  D  N  G  N  L  L  V  T  E  Y  G  L  C  T  Y  K  D  H  Q  T  L  S  M  Q  E  V  P  E  N  S  A  P  G  Q  L  P  R  T  V  D  I  V  V  E  D  D  L  V  D  S  C  K  P </first_frame>
            <second_frame>  L  S  S  I  S  L  S  L  S  H  R  D  *  H  L  L  S  Q  P  W  I  *  A  T  R  L  G  L  R  I  S  E  L  S  S  S  S  S  N  K  L :   N  W  T  R  S  *  R  R  N  L  N  L  *  S  T  T  I  G  V  V  S  L  W  T  S  L  I  S  T  M  T  E  K  A  L  I  W  L  A   : G  F  F  R  I  L  V  S  I  C  N  R  *  L  M  L  *  P  I  *  S  G  P  I  I  P  S  T  L  K  K  A  S  K  S  W  L  G  L  L  V  L  L  F  R  G  E  *  P  Q  E  S  C  C  P  V  S  L  V  P  W  F  A  L  K  A  L  L  P  S  :  V  L  L  *  G  Q  R  L  *  R  A  S  T  F  V  R  Q  L  R  N  L  R  P  V  N  T  E  I  S  H  R  M  L  V  C  Q  L  V  L  C  T  R  H  G :   M  I  M  A  I  C  *  L  L  S  T  V  Y  A  H  T  K  I  I  K  L  Y  Q  C  K  R  C  L  K  I  L  L  L  V  N  F  L  E  Q  W  I  *  S  *  R  M  I  L  L  I  H  A  S   </second_frame>
            <third_frame>   S  P  P  F  L  S  L  S  H  T  E  I  N  T  Y  S  V  S  H  G  S  K  R  R  G  *  G  Y  A  *  A  N  F  P  Q  V  L  R  T  N   : *  T  G  H  G  A  E  E  G  I  *  I  Y  D  Q  Q  Q  *  A  S  C  H  Y  G  P  R  *  F  L  Q  *  Q  R  R  L  *  F  G  S  Q  :  A  S  S  E  S  *  *  V  Y  A  T  V  D  *  C  F  N  R  Y  D  P  D  P  *  S  Q  V  P  *  R  R  R  A  S  L  G  W  V  Y  W  S  F  C  F  E  E  S  N  P  K  R  A  V  V  P  F  H  W  F  H  G  L  R  *  R  H  C  Y  Q  V :   F  S  C  E  A  K  G  C  K  E  R  P  L  L  S  D  N  *  E  I  Y  G  P  *  I  Q  R  Y  H  I  E  C  W  S  A  N  W  F  C  V  P  D  T   : G  *  *  W  Q  F  A  S  Y  *  V  R  F  M  H  I  Q  R  S  S  N  F  I  N  A  R  G  A  *  K  F  C  S  W  S  T  S  *  N  S  G  Y  S  R  R  G  *  S  C  *  F  M  Q  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55844" stop="55722"/>
                    <exon start="55587" stop="55469"/>
                    <exon start="55188" stop="54980"/>
                    <exon start="53269" stop="53139"/>
                    <exon start="53052" stop="52891"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLLHFSLSLTQRLTLTQSAMDLSDEVRATHKRTFLKFFEQTELDTELKKEFESMINNNRRRVIMDLADFYNDREGSDLARRLLQNPSEYMQPLIDALTDMIRTHNPKYLKEGEQVLVGFTGPFVSRRVTPRELLSRFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPTTEKFTAREYRDITSNVGLPTGSVYPTRDDNGNLLVTEYGLCTYKDHQTLSMQEVPENSAPGQLPRTVDIVVEDDLVDSCKP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="62454" PGL_stop="58139"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62454" e_stop="61834"/>
            <exon e_start="61309" e_stop="60878"/>
            <exon e_start="60629" e_stop="60456"/>
            <exon e_start="59237" e_stop="59124"/>
            <exon e_start="59033" e_stop="58932"/>
            <exon e_start="58846" e_stop="58780"/>
            <exon e_start="58672" e_stop="58296"/>
            <exon e_start="58221" e_stop="58139"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.998"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="0.982"/>
          <exon-intron don_prob="0.879" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.973"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="62454" e_stop="61834" e_length="621"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61833" i_stop="61310" i_length="524"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61309" e_stop="60878" e_length="432"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60877" i_stop="60630" i_length="248"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="60629" e_stop="60456" e_length="174"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60455" i_stop="59238" i_length="1218"/>
          </intron>
          <exon e_serial="4" e_score="0.982">
            <gDNA_exon_boundary e_start="59237" e_stop="59124" e_length="114"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="59123" i_stop="59034" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59033" e_stop="58932" e_length="102"/>
          </exon>
          <intron i_serial="5" don_prob="0.879" acc_prob="0.999">
            <gDNA_intron_boundary i_start="58931" i_stop="58847" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="58846" e_stop="58780" e_length="67"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.934">
            <gDNA_intron_boundary i_start="58779" i_stop="58673" i_length="107"/>
          </intron>
          <exon e_serial="7" e_score="0.973">
            <gDNA_exon_boundary e_start="58672" e_stop="58296" e_length="377"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58295" i_stop="58222" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="0.940">
            <gDNA_exon_boundary e_start="58221" e_stop="58139" e_length="83"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62454" stop="61834"/>
              <exon start="61309" stop="60878"/>
              <exon start="60629" stop="60456"/>
              <exon start="59237" stop="59124"/>
              <exon start="59033" stop="58932"/>
              <exon start="58846" stop="58780"/>
              <exon start="58672" stop="58296"/>
              <exon start="58221" stop="58139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62410" stop="61905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58846" stop="58780"/>
              <exon start="58672" stop="58316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593563" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTTGGTTTCTCTCTTTCTGTACAAGCACAAAACACACACTCCCTTTCTCTCTCTAAAAATAGTAGTAATACACTCGCATCGTTAACATCGAAAAGCTTTTTGCTGCTGCTTCTTCTTCTTCTTCTTGCTCCGCCACCTCAAATCTGAAAACCCATTTCAGTTAACAATGGAAGCAATCCAATCTCTATCATTTCGTCCGTCTCCACTCGAACCTCTACGAAAAAACATCCCCCAGTTCACCAATGTGAGGTCATTGGGTGCTAAAAGAGTGCCTTTAACAGTAACAGCTTCTGCATCTACTGTTTCTGCTCCAAAAAGAGAGAAAGACCCAAAGAAAAGGGTTGTTATAACTGGGACGGGTCTTGTTTCTGTGTTTGGGAATGATGCCGATACTTACTATGACAGACTTTTGGCTGGTGAAAGTGGGATTTCGCTTATTGATCGTTTTGATGCTTCTAAATTTCCTACGAGATTTGGGGGACAAATTCGTGGGTTTACATCTGAAGGGTATATTGATGGGAAGAATGATAGGAGGCTTGATGATTGTTTAAGGTATGCCATTGTTGCTGGCAAGAAAGCTTTGGAAAATGCAGATCTTGGTGGTGATAGATTAGAAAAG : ATTGATAAAGAGAGAGCAGGTGTTCTTGTAGGAACAGGAATGGGTGGTCTTACAGTTTTCTCAGATGGTGTACAAAACCTAATTGAAAAGGGTCACAGGAAAATTACTCCATTTTTTGTACCATATGCCATAACAAACATGGGTTCTGCTTTGCTTGGTATTGATCTTGGTTTTATGGGACCAAACTACTCAATCTCAACTGCTTGTGCTACCTCCAATTACTGTTTTTATGCTGCCGCTAATCACATCCGTAGAGGTGAAGCGGATTTGATGCTTGCTGGTGGAACTGAAGCTGCCATAATACCTATTGGTTTAGGAGGTTTTGTGGCATGCAGAGCTTTGTCTCAAAGAAATGATGATCCACAAACTGCTTCCAGGCCGTGGGACAAAGAAAGAGATGGATTTGTTATGGGAGAGGGGGCTGGAATCTTG : GTGATGGAAAGTTTGGAGCATGCAATGAAACGAGGAGCGCCAATAATTGCAGAGTATTTGGGTGGTGCAGTTAATTGTGATGCTTATCACATGACCGATCCCCGAGCTGATGGTCTTGGTGTTTCTTCATGTATTCTTAGCAGCCTTGAAGATGCTGGAGTGTCACCAGAAGAG : GTTAACTACATTAATGCTCATGCAACTTCTACCATTGTTGGTGATCTAGCCGAAATAAATGCTGTTAAGAAGGTTTTCAAGACCACTACAGGAATCAAAATGAATGCAACCAAG : TCTATGATAGGGCATTGCCTCGGTGCTGCTGGTGGTCTGGAAGCTATTGCAACAATTAAAGCTATTACAACCGGCTGGGTGCATCCTTCAATTAACCAATTC : AATCCTGAGCCTTCAGTGGAATTTGATACTGTTCCAAACAAAAAACAGCAGCATGAAGTGAATGTTG : CTATCTCCAATTCCTTTGGTTTTGGTGGCCACAACTCTGTCGTTGCCTTTTCTGCATTCAAGCCTTAATTCAGCTCAGTTTAGGTAGAGCAATCTTCTGGAGTAGTACAGGGGGTTAATGTGATACACATTGTCTGTTTCATCTCCGTGTGGGAAACTTGCTGGGCGCAGCGAGAGAGGAACAATTGTCCATTCTTTTTATGTACTAATAATCTTTAGCTTGTAGTTTTATAGCAATGAACATTTTCACTTTTCATTCCTTAAATTAGCTTGGACCTTCATAGTTTGGTTAAACAACAATGCCATCAGTTTTGAATTATGCAAGAGATTTGAAAGATGATATGATCTTTTGAGATTAACAACTCTCTGATGGCACCT : GTTTTCGAAAAAAAAATATCTAGTTAACCTGTAAGCTGTATAAACAGCCATATTCACAACTATACTCGTCGCTACTAAATTAA</gDNA_template>
            <first_frame> D  L  V  S  L  F  L  Y  K  H  K  T  H  T  P  F  L  S  L  K  I  V  V  I  H  S  H  R  *  H  R  K  A  F  C  C  C  F  F  F  F  F  L  L  R  H  L  K  S  E  N  P  F  Q  L  T  M  E  A  I  Q  S  L  S  F  R  P  S  P  L  E  P  L  R  K  N  I  P  Q  F  T  N  V  R  S  L  G  A  K  R  V  P  L  T  V  T  A  S  A  S  T  V  S  A  P  K  R  E  K  D  P  K  K  R  V  V  I  T  G  T  G  L  V  S  V  F  G  N  D  A  D  T  Y  Y  D  R  L  L  A  G  E  S  G  I  S  L  I  D  R  F  D  A  S  K  F  P  T  R  F  G  G  Q  I  R  G  F  T  S  E  G  Y  I  D  G  K  N  D  R  R  L  D  D  C  L  R  Y  A  I  V  A  G  K  K  A  L  E  N  A  D  L  G  G  D  R  L  E  K  :  I  D  K  E  R  A  G  V  L  V  G  T  G  M  G  G  L  T  V  F  S  D  G  V  Q  N  L  I  E  K  G  H  R  K  I  T  P  F  F  V  P  Y  A  I  T  N  M  G  S  A  L  L  G  I  D  L  G  F  M  G  P  N  Y  S  I  S  T  A  C  A  T  S  N  Y  C  F  Y  A  A  A  N  H  I  R  R  G  E  A  D  L  M  L  A  G  G  T  E  A  A  I  I  P  I  G  L  G  G  F  V  A  C  R  A  L  S  Q  R  N  D  D  P  Q  T  A  S  R  P  W  D  K  E  R  D  G  F  V  M  G  E  G  A  G  I  L  :  V  M  E  S  L  E  H  A  M  K  R  G  A  P  I  I  A  E  Y  L  G  G  A  V  N  C  D  A  Y  H  M  T  D  P  R  A  D  G  L  G  V  S  S  C  I  L  S  S  L  E  D  A  G  V  S  P  E  E  :  V  N  Y  I  N  A  H  A  T  S  T  I  V  G  D  L  A  E  I  N  A  V  K  K  V  F  K  T  T  T  G  I  K  M  N  A  T  K  :  S  M  I  G  H  C  L  G  A  A  G  G  L  E  A  I  A  T  I  K  A  I  T  T  G  W  V  H  P  S  I  N  Q  F  :  N  P  E  P  S  V  E  F  D  T  V  P  N  K  K  Q  Q  H  E  V  N  V   : A  I  S  N  S  F  G  F  G  G  H  N  S  V  V  A  F  S  A  F  K  P  *  F  S  S  V  *  V  E  Q  S  S  G  V  V  Q  G  V  N  V  I  H  I  V  C  F  I  S  V  W  E  T  C  W  A  Q  R  E  R  N  N  C  P  F  F  L  C  T  N  N  L  *  L  V  V  L  *  Q  *  T  F  S  L  F  I  P  *  I  S  L  D  L  H  S  L  V  K  Q  Q  C  H  Q  F  *  I  M  Q  E  I  *  K  M  I  *  S  F  E  I  N  N  S  L  M  A  P  :  V  F  E  K  K  I  S  S  *  P  V  S  C  I  N  S  H  I  H  N  Y  T  R  R  Y  *  I   </first_frame>
            <second_frame>  T  W  F  L  S  F  C  T  S  T  K  H  T  L  P  F  S  L  *  K  *  *  *  Y  T  R  I  V  N  I  E  K  L  F  A  A  A  S  S  S  S  S  C  S  A  T  S  N  L  K  T  H  F  S  *  Q  W  K  Q  S  N  L  Y  H  F  V  R  L  H  S  N  L  Y  E  K  T  S  P  S  S  P  M  *  G  H  W  V  L  K  E  C  L  *  Q  *  Q  L  L  H  L  L  F  L  L  Q  K  E  R  K  T  Q  R  K  G  L  L  *  L  G  R  V  L  F  L  C  L  G  M  M  P  I  L  T  M  T  D  F  W  L  V  K  V  G  F  R  L  L  I  V  L  M  L  L  N  F  L  R  D  L  G  D  K  F  V  G  L  H  L  K  G  I  L  M  G  R  M  I  G  G  L  M  I  V  *  G  M  P  L  L  L  A  R  K  L  W  K  M  Q  I  L  V  V  I  D  *  K  R :   L  I  K  R  E  Q  V  F  L  *  E  Q  E  W  V  V  L  Q  F  S  Q  M  V  Y  K  T  *  L  K  R  V  T  G  K  L  L  H  F  L  Y  H  M  P  *  Q  T  W  V  L  L  C  L  V  L  I  L  V  L  W  D  Q  T  T  Q  S  Q  L  L  V  L  P  P  I  T  V  F  M  L  P  L  I  T  S  V  E  V  K  R  I  *  C  L  L  V  E  L  K  L  P  *  Y  L  L  V  *  E  V  L  W  H  A  E  L  C  L  K  E  M  M  I  H  K  L  L  P  G  R  G  T  K  K  E  M  D  L  L  W  E  R  G  L  E  S  W :   *  W  K  V  W  S  M  Q  *  N  E  E  R  Q  *  L  Q  S  I  W  V  V  Q  L  I  V  M  L  I  T  *  P  I  P  E  L  M  V  L  V  F  L  H  V  F  L  A  A  L  K  M  L  E  C  H  Q  K  R :   L  T  T  L  M  L  M  Q  L  L  P  L  L  V  I  *  P  K  *  M  L  L  R  R  F  S  R  P  L  Q  E  S  K  *  M  Q  P  S :   L  *  *  G  I  A  S  V  L  L  V  V  W  K  L  L  Q  Q  L  K  L  L  Q  P  A  G  C  I  L  Q  L  T  N  S :   I  L  S  L  Q  W  N  L  I  L  F  Q  T  K  N  S  S  M  K  *  M  L  :  L  S  P  I  P  L  V  L  V  A  T  T  L  S  L  P  F  L  H  S  S  L  N  S  A  Q  F  R  *  S  N  L  L  E  *  Y  R  G  L  M  *  Y  T  L  S  V  S  S  P  C  G  K  L  A  G  R  S  E  R  G  T  I  V  H  S  F  Y  V  L  I  I  F  S  L  *  F  Y  S  N  E  H  F  H  F  S  F  L  K  L  A  W  T  F  I  V  W  L  N  N  N  A  I  S  F  E  L  C  K  R  F  E  R  *  Y  D  L  L  R  L  T  T  L  *  W  H  L :   F  S  K  K  K  Y  L  V  N  L  *  A  V  *  T  A  I  F  T  T  I  L  V  A  T  K  L  </second_frame>
            <third_frame>   L  G  F  S  L  S  V  Q  A  Q  N  T  H  S  L  S  L  S  K  N  S  S  N  T  L  A  S  L  T  S  K  S  F  L  L  L  L  L  L  L  L  L  A  P  P  P  Q  I  *  K  P  I  S  V  N  N  G  S  N  P  I  S  I  I  S  S  V  S  T  R  T  S  T  K  K  H  P  P  V  H  Q  C  E  V  I  G  C  *  K  S  A  F  N  S  N  S  F  C  I  Y  C  F  C  S  K  K  R  E  R  P  K  E  K  G  C  Y  N  W  D  G  S  C  F  C  V  W  E  *  C  R  Y  L  L  *  Q  T  F  G  W  *  K  W  D  F  A  Y  *  S  F  *  C  F  *  I  S  Y  E  I  W  G  T  N  S  W  V  Y  I  *  R  V  Y  *  W  E  E  *  *  E  A  *  *  L  F  K  V  C  H  C  C  W  Q  E  S  F  G  K  C  R  S  W  W  *  *  I  R  K   : D  *  *  R  E  S  R  C  S  C  R  N  R  N  G  W  S  Y  S  F  L  R  W  C  T  K  P  N  *  K  G  S  Q  E  N  Y  S  I  F  C  T  I  C  H  N  K  H  G  F  C  F  A  W  Y  *  S  W  F  Y  G  T  K  L  L  N  L  N  C  L  C  Y  L  Q  L  L  F  L  C  C  R  *  S  H  P  *  R  *  S  G  F  D  A  C  W  W  N  *  S  C  H  N  T  Y  W  F  R  R  F  C  G  M  Q  S  F  V  S  K  K  *  *  S  T  N  C  F  Q  A  V  G  Q  R  K  R  W  I  C  Y  G  R  G  G  W  N  L   : G  D  G  K  F  G  A  C  N  E  T  R  S  A  N  N  C  R  V  F  G  W  C  S  *  L  *  C  L  S  H  D  R  S  P  S  *  W  S  W  C  F  F  M  Y  S  *  Q  P  *  R  C  W  S  V  T  R  R   : G  *  L  H  *  C  S  C  N  F  Y  H  C  W  *  S  S  R  N  K  C  C  *  E  G  F  Q  D  H  Y  R  N  Q  N  E  C  N  Q   : V  Y  D  R  A  L  P  R  C  C  W  W  S  G  S  Y  C  N  N  *  S  Y  Y  N  R  L  G  A  S  F  N  *  P  I   : Q  S  *  A  F  S  G  I  *  Y  C  S  K  Q  K  T  A  A  *  S  E  C  C :   Y  L  Q  F  L  W  F  W  W  P  Q  L  C  R  C  L  F  C  I  Q  A  L  I  Q  L  S  L  G  R  A  I  F  W  S  S  T  G  G  *  C  D  T  H  C  L  F  H  L  R  V  G  N  L  L  G  A  A  R  E  E  Q  L  S  I  L  F  M  Y  *  *  S  L  A  C  S  F  I  A  M  N  I  F  T  F  H  S  L  N  *  L  G  P  S  *  F  G  *  T  T  M  P  S  V  L  N  Y  A  R  D  L  K  D  D  M  I  F  *  D  *  Q  L  S  D  G  T   : C  F  R  K  K  N  I  *  L  T  C  K  L  Y  K  Q  P  Y  S  Q  L  Y  S  S  L  L  N  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62367" stop="61834"/>
                    <exon start="61309" stop="60878"/>
                    <exon start="60629" stop="60456"/>
                    <exon start="59237" stop="59124"/>
                    <exon start="59033" stop="58932"/>
                    <exon start="58846" stop="58780"/>
                    <exon start="58672" stop="58605"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1488</number_coding_nucleotides>
                  <number_encoded_amino_acids>496</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HRKAFCCCFFFFFLLRHLKSENPFQLTMEAIQSLSFRPSPLEPLRKNIPQFTNVRSLGAKRVPLTVTASASTVSAPKREKDPKKRVVITGTGLVSVFGNDADTYYDRLLAGESGISLIDRFDASKFPTRFGGQIRGFTSEGYIDGKNDRRLDDCLRYAIVAGKKALENADLGGDRLEKIDKERAGVLVGTGMGGLTVFSDGVQNLIEKGHRKITPFFVPYAITNMGSALLGIDLGFMGPNYSISTACATSNYCFYAAANHIRRGEADLMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKERDGFVMGEGAGILVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCILSSLEDAGVSPEEVNYINAHATSTIVGDLAEINAVKKVFKTTTGIKMNATKSMIGHCLGAAGGLEAIATIKAITTGWVHPSINQFNPEPSVEFDTVPNKKQQHEVNVAISNSFGFGGHNSVVAFSAFKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="60141" e_stop="59577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="60141" e_stop="59577" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60141" stop="59577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598030" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTGTGTGTTTTTGTTTTAGGCTGAATGGAAGATATTGTGCAACGAGTGAACCTTCATTCCTTAATAATAAAAAAAAAATTACTTGTGACATTATAGTCTTTCCATGTCAATTTTATGCCCATAGACTCTCATCCATGTCCCATTGCCTCTTAAAGAAAAAAATGCTACCTCCCATGTTAGCTTTATTCTAAATTTTAGATTCCAAGTAAAGATTACTCCCTCTCTCTTTAGTAGATAAAGACATCCCCTTATTGAGAGTAAACAAAAGGTTACTATTCAATTTTAATCATCAAAGACACATGTTAAAACTGCTGGCGATCAGAAAAAATTGGATTCTTTCACCATTAATAAAATGCACCTAAAATGCTTGTACAGTTCATCCTAGATACTAAGCCCTATCACTGGAGCTTTAGTGTCTTCTTCTCAGATCTGATTTTAACAATACCAACCTTCTCACCTTGTTGCATCGAAAGAAGTAACACAGACTTTGCTTTGAACCACTATGCCCTAAGCTACAGCAATTGTCTAGAGTCAGCATGATATCTGTTGATGAATTAATAGT</gDNA_template>
            <first_frame> F  L  C  V  F  V  L  G  *  M  E  D  I  V  Q  R  V  N  L  H  S  L  I  I  K  K  K  L  L  V  T  L  *  S  F  H  V  N  F  M  P  I  D  S  H  P  C  P  I  A  S  *  R  K  K  C  Y  L  P  C  *  L  Y  S  K  F  *  I  P  S  K  D  Y  S  L  S  L  *  *  I  K  T  S  P  Y  *  E  *  T  K  G  Y  Y  S  I  L  I  I  K  D  T  C  *  N  C  W  R  S  E  K  I  G  F  F  H  H  *  *  N  A  P  K  M  L  V  Q  F  I  L  D  T  K  P  Y  H  W  S  F  S  V  F  F  S  D  L  I  L  T  I  P  T  F  S  P  C  C  I  E  R  S  N  T  D  F  A  L  N  H  Y  A  L  S  Y  S  N  C  L  E  S  A  *  Y  L  L  M  N  *  *  </first_frame>
            <second_frame>  F  C  V  F  L  F  *  A  E  W  K  I  L  C  N  E  *  T  F  I  P  *  *  *  K  K  N  Y  L  *  H  Y  S  L  S  M  S  I  L  C  P  *  T  L  I  H  V  P  L  P  L  K  E  K  N  A  T  S  H  V  S  F  I  L  N  F  R  F  Q  V  K  I  T  P  S  L  F  S  R  *  R  H  P  L  I  E  S  K  Q  K  V  T  I  Q  F  *  S  S  K  T  H  V  K  T  A  G  D  Q  K  K  L  D  S  F  T  I  N  K  M  H  L  K  C  L  Y  S  S  S  *  I  L  S  P  I  T  G  A  L  V  S  S  S  Q  I  *  F  *  Q  Y  Q  P  S  H  L  V  A  S  K  E  V  T  Q  T  L  L  *  T  T  M  P  *  A  T  A  I  V  *  S  Q  H  D  I  C  *  *  I  N  S </second_frame>
            <third_frame>   S  V  C  F  C  F  R  L  N  G  R  Y  C  A  T  S  E  P  S  F  L  N  N  K  K  K  I  T  C  D  I  I  V  F  P  C  Q  F  Y  A  H  R  L  S  S  M  S  H  C  L  L  K  K  K  M  L  P  P  M  L  A  L  F  *  I  L  D  S  K  *  R  L  L  P  L  S  L  V  D  K  D  I  P  L  L  R  V  N  K  R  L  L  F  N  F  N  H  Q  R  H  M  L  K  L  L  A  I  R  K  N  W  I  L  S  P  L  I  K  C  T  *  N  A  C  T  V  H  P  R  Y  *  A  L  S  L  E  L  *  C  L  L  L  R  S  D  F  N  N  T  N  L  L  T  L  L  H  R  K  K  *  H  R  L  C  F  E  P  L  C  P  K  L  Q  Q  L  S  R  V  S  M  I  S  V  D  E  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0122F06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="69237" PGL_stop="66585"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69237" e_stop="68938"/>
            <exon e_start="68790" e_stop="68725"/>
            <exon e_start="68537" e_stop="68463"/>
            <exon e_start="67990" e_stop="67928"/>
            <exon e_start="67768" e_stop="67709"/>
            <exon e_start="67565" e_stop="67476"/>
            <exon e_start="67394" e_stop="67287"/>
            <exon e_start="67091" e_stop="66969"/>
            <exon e_start="66857" e_stop="66585"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="0.983"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.152" e_score="1.000"/>
          <exon-intron don_prob="0.845" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="69237" e_stop="68938" e_length="300"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="68937" i_stop="68791" i_length="147"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68790" e_stop="68725" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="68724" i_stop="68538" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68537" e_stop="68463" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="68462" i_stop="67991" i_length="472"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67990" e_stop="67928" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.152">
            <gDNA_intron_boundary i_start="67927" i_stop="67769" i_length="159"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67768" e_stop="67709" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.845" acc_prob="0.933">
            <gDNA_intron_boundary i_start="67708" i_stop="67566" i_length="143"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="67565" e_stop="67476" e_length="90"/>
          </exon>
          <intron i_serial="6" don_prob="0.974" acc_prob="0.997">
            <gDNA_intron_boundary i_start="67475" i_stop="67395" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67394" e_stop="67287" e_length="108"/>
          </exon>
          <intron i_serial="7" don_prob="0.978" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67286" i_stop="67092" i_length="195"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67091" e_stop="66969" e_length="123"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66968" i_stop="66858" i_length="111"/>
          </intron>
          <exon e_serial="9" e_score="0.993">
            <gDNA_exon_boundary e_start="66857" e_stop="66585" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69237" stop="68938"/>
              <exon start="68790" stop="68725"/>
              <exon start="68537" stop="68463"/>
              <exon start="67990" stop="67928"/>
              <exon start="67768" stop="67709"/>
              <exon start="67565" stop="67476"/>
              <exon start="67394" stop="67287"/>
              <exon start="67091" stop="66969"/>
              <exon start="66857" stop="66585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTGGTTTTATCCCTTGCATAAAATATCCACAGCTTGTTTAAAGCTGATAACTTTCTTATCCCCTCACTCCATAGACAAGAAGAAGAAAAAGAAGATGAGCATCTCACTGTATACACCAGTTTCTCCCAAAAACCAATTACAAGTATTTTTGAAACCAAATCAGAATCCCCTTCTACTAGGTGATTCTGTTTTTCCAAAACGTGTTTCATTTGCTAGAAGAAAATGTACCACAAGGGCTCTGCTTTCACATTCCAAAGATGCTGTTTTGAAAGAGTTTCACGAGAAAAAAGCACTAAAG : ATTATCGCAGGATTGCAAAATCTGGACAAAGAGAATGTGGCTTCTGTTGTTACTGCTGCAGATAAG : GGAGGAGCAACACATGTAGATATAGCTTGTGACCCTGAGCTGGTGAAACTTGCTATAAGCCTGACTTCCCTTCCG : GTTTGTGTTTCTTCTGTGGATCCTTCAGCATTTCCAGCTGCTGTGGAAGCAGGAGCCTTGATG : GTTGAGATCGGAAACTATGACTCGTTCTATGAGAAGGGATTGGTGTTCTCTCCTGAACAG : ATTTTGAACCTAACGAAGGAGACAAAGAAGTTACTTCCATCAGTGATATTATCAGTCACTGTGCCTCACACGCTAAGCCTTCCTGATCAG : GTCAAGCTGGCCGAGCAATTAGAACTGGAAGGTGTTGACATCATCCAAACAGAAGGAGGAAAATGCTCTACTCCATCAAAGGCTGGTATTCTTGGATTAATCGAGAAG : GCAACACCAACACTAGCAGCTGCTTATTCGATTTCAAGGGCTGTCAATATCCCCGTCATGTGTTCATCTGGATTGAGTGCAGTCACAGCACCAATGGCAATCGTAGCTGGAGCTGCTGGCGTG : GGTGTTGGCTCAGCCATCAACAAGCTCAACGATCAGGTAGCAATGATCGCGGAAGTCAAATCCATAGCTCATTCATTAGGATTGTCAACCAAGAAGCAGAATTTATTTGAAGGGAGCAATTTGATAGTGTAATCCAATCTAATGTAGTAGCTCAAGGCCTGAAGCAATTAGGAATTATTATGAAACTAATAAAGTTTTTCTATTTTTTCTTGCAGTATCATTTTTTACATTAGTTATTATAAATTCATAATACATAAATATGTCATTTAACTT</gDNA_template>
            <first_frame> I  W  F  Y  P  L  H  K  I  S  T  A  C  L  K  L  I  T  F  L  S  P  H  S  I  D  K  K  K  K  K  K  M  S  I  S  L  Y  T  P  V  S  P  K  N  Q  L  Q  V  F  L  K  P  N  Q  N  P  L  L  L  G  D  S  V  F  P  K  R  V  S  F  A  R  R  K  C  T  T  R  A  L  L  S  H  S  K  D  A  V  L  K  E  F  H  E  K  K  A  L  K  :  I  I  A  G  L  Q  N  L  D  K  E  N  V  A  S  V  V  T  A  A  D  K  :  G  G  A  T  H  V  D  I  A  C  D  P  E  L  V  K  L  A  I  S  L  T  S  L  P  :  V  C  V  S  S  V  D  P  S  A  F  P  A  A  V  E  A  G  A  L  M  :  V  E  I  G  N  Y  D  S  F  Y  E  K  G  L  V  F  S  P  E  Q  :  I  L  N  L  T  K  E  T  K  K  L  L  P  S  V  I  L  S  V  T  V  P  H  T  L  S  L  P  D  Q  :  V  K  L  A  E  Q  L  E  L  E  G  V  D  I  I  Q  T  E  G  G  K  C  S  T  P  S  K  A  G  I  L  G  L  I  E  K  :  A  T  P  T  L  A  A  A  Y  S  I  S  R  A  V  N  I  P  V  M  C  S  S  G  L  S  A  V  T  A  P  M  A  I  V  A  G  A  A  G  V  :  G  V  G  S  A  I  N  K  L  N  D  Q  V  A  M  I  A  E  V  K  S  I  A  H  S  L  G  L  S  T  K  K  Q  N  L  F  E  G  S  N  L  I  V  *  S  N  L  M  *  *  L  K  A  *  S  N  *  E  L  L  *  N  *  *  S  F  S  I  F  S  C  S  I  I  F  Y  I  S  Y  Y  K  F  I  I  H  K  Y  V  I  *  L </first_frame>
            <second_frame>  F  G  F  I  P  C  I  K  Y  P  Q  L  V  *  S  *  *  L  S  Y  P  L  T  P  *  T  R  R  R  K  R  R  *  A  S  H  C  I  H  Q  F  L  P  K  T  N  Y  K  Y  F  *  N  Q  I  R  I  P  F  Y  *  V  I  L  F  F  Q  N  V  F  H  L  L  E  E  N  V  P  Q  G  L  C  F  H  I  P  K  M  L  F  *  K  S  F  T  R  K  K  H  *  R :   L  S  Q  D  C  K  I  W  T  K  R  M  W  L  L  L  L  L  L  Q  I  R :   E  E  Q  H  M  *  I  *  L  V  T  L  S  W  *  N  L  L  *  A  *  L  P  F  R :   F  V  F  L  L  W  I  L  Q  H  F  Q  L  L  W  K  Q  E  P  *  W :   L  R  S  E  T  M  T  R  S  M  R  R  D  W  C  S  L  L  N  R :   F  *  T  *  R  R  R  Q  R  S  Y  F  H  Q  *  Y  Y  Q  S  L  C  L  T  R  *  A  F  L  I  R :   S  S  W  P  S  N  *  N  W  K  V  L  T  S  S  K  Q  K  E  E  N  A  L  L  H  Q  R  L  V  F  L  D  *  S  R  R :   Q  H  Q  H  *  Q  L  L  I  R  F  Q  G  L  S  I  S  P  S  C  V  H  L  D  *  V  Q  S  Q  H  Q  W  Q  S  *  L  E  L  L  A  W :   V  L  A  Q  P  S  T  S  S  T  I  R  *  Q  *  S  R  K  S  N  P  *  L  I  H  *  D  C  Q  P  R  S  R  I  Y  L  K  G  A  I  *  *  C  N  P  I  *  C  S  S  S  R  P  E  A  I  R  N  Y  Y  E  T  N  K  V  F  L  F  F  L  A  V  S  F  F  T  L  V  I  I  N  S  *  Y  I  N  M  S  F  N   </second_frame>
            <third_frame>   L  V  L  S  L  A  *  N  I  H  S  L  F  K  A  D  N  F  L  I  P  S  L  H  R  Q  E  E  E  K  E  D  E  H  L  T  V  Y  T  S  F  S  Q  K  P  I  T  S  I  F  E  T  K  S  E  S  P  S  T  R  *  F  C  F  S  K  T  C  F  I  C  *  K  K  M  Y  H  K  G  S  A  F  T  F  Q  R  C  C  F  E  R  V  S  R  E  K  S  T  K   : D  Y  R  R  I  A  K  S  G  Q  R  E  C  G  F  C  C  Y  C  C  R  *   : G  R  S  N  T  C  R  Y  S  L  *  P  *  A  G  E  T  C  Y  K  P  D  F  P  S   : G  L  C  F  F  C  G  S  F  S  I  S  S  C  C  G  S  R  S  L  D   : G  *  D  R  K  L  *  L  V  L  *  E  G  I  G  V  L  S  *  T   : D  F  E  P  N  E  G  D  K  E  V  T  S  I  S  D  I  I  S  H  C  A  S  H  A  K  P  S  *  S   : G  Q  A  G  R  A  I  R  T  G  R  C  *  H  H  P  N  R  R  R  K  M  L  Y  S  I  K  G  W  Y  S  W  I  N  R  E   : G  N  T  N  T  S  S  C  L  F  D  F  K  G  C  Q  Y  P  R  H  V  F  I  W  I  E  C  S  H  S  T  N  G  N  R  S  W  S  C  W  R   : G  C  W  L  S  H  Q  Q  A  Q  R  S  G  S  N  D  R  G  S  Q  I  H  S  S  F  I  R  I  V  N  Q  E  A  E  F  I  *  R  E  Q  F  D  S  V  I  Q  S  N  V  V  A  Q  G  L  K  Q  L  G  I  I  M  K  L  I  K  F  F  Y  F  F  L  Q  Y  H  F  L  H  *  L  L  *  I  H  N  T  *  I  C  H  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69237" stop="68938"/>
                    <exon start="68790" stop="68725"/>
                    <exon start="68537" stop="68463"/>
                    <exon start="67990" stop="67928"/>
                    <exon start="67768" stop="67709"/>
                    <exon start="67565" stop="67476"/>
                    <exon start="67394" stop="67287"/>
                    <exon start="67091" stop="66969"/>
                    <exon start="66857" stop="66726"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWFYPLHKISTACLKLITFLSPHSIDKKKKKKMSISLYTPVSPKNQLQVFLKPNQNPLLLGDSVFPKRVSFARRKCTTRALLSHSKDAVLKEFHEKKALKIIAGLQNLDKENVASVVTAADKGGATHVDIACDPELVKLAISLTSLPVCVSSVDPSAFPAAVEAGALMVEIGNYDSFYEKGLVFSPEQILNLTKETKKLLPSVILSVTVPHTLSLPDQVKLAEQLELEGVDIIQTEGGKCSTPSKAGILGLIEKATPTLAAAYSISRAVNIPVMCSSGLSAVTAPMAIVAGAAGVGVGSAINKLNDQVAMIAEVKSIAHSLGLSTKKQNLFEGSNLIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="71173" PGL_stop="70102"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71173" e_stop="70102"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="71173" e_stop="70102" e_length="1072"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71173" stop="70102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571174" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTGATCCACCTTATGTTGGTTATGTGAAGCCGTGGGTTGATCTTGATACGGGTAATTCATATTGCCTTTTCTTCCCTTACTCTCCTGAAAGTTTGGTACTTGCCACTCCAAAGTCAGGAGGCATTAAACAGGATTTAGCTGTTACTATTAAGGCATCACTGATCGGAGAGCAGAATATCTCAGGATCTGCATCAGCACTTTTTGTTGGAGGTTTCATCATTCCGGGAACGGAAGGAGATTCATTGCAGTTAAATCTAACCCCACAATTTAACAGGAGTGTCCTCACTGTTGTAGGAAACACAGATGTGAGTATCTACTGGCATGATCGGGAACGACTAGCTGTCAGACCCATACATGGAGAAGATTCTCAAGGAAGAAGCCGTGCACAGTATGAGATCAAAATTCGCAGAGCAGAGAAGTTTAAAGACAAACTGATTTTTACACTCCCAGCAACTGGTCAGATCACGGAAGTTAATGTTAACTATGAACCTGAAGAGAGAAGAGCAACAATTATTAACCTTAATTTATGGGCTACTGCAGCTGCTTGTTTCATCTTGCTTATAGTCACAGCCACTGTATTCATTTCTTACTTGGATCAACCTGTGAGATCCCGACCATCTGCTCCTCCTGGCACACCAAGTGTAGCTGCACCTGTAACTCCTGAGCGAAGCAGTCCTGCTGGAGTAAGCGAACATTCACCTCGGACACCTCAACCTTTCTTGGATTATGTTAGGAGGACAATTGATGAAACTCCATACTACAGACAAGACTTTAGGAGGAGGGCTAACCCTCAGAACACTTACTAGCATATTGTGGGGCCAATTCACCTCTTCCCTACTCCCCCTTTTGCCTTTGCTAGATATGCCAAATGGTTTCTCAGGTAATTGCCAAAGGTCTTGAATCTGGCTGCAAACTTTACAATGATAGTGTTGTAGTTTTGTTGGTGTAATTTTGTGTAGAGTATTGCAAGCTGTGTGTCATTGGATACTTTCTAGAGAAGCAGCCTCATCTGCCAAAAAATTCTTATGTCCTGCTTTCTGCTGGAAAAGGCAATACAACAGCACTTTCTA</gDNA_template>
            <first_frame> G  *  S  T  L  C  W  L  C  E  A  V  G  *  S  *  Y  G  *  F  I  L  P  F  L  P  L  L  S  *  K  F  G  T  C  H  S  K  V  R  R  H  *  T  G  F  S  C  Y  Y  *  G  I  T  D  R  R  A  E  Y  L  R  I  C  I  S  T  F  C  W  R  F  H  H  S  G  N  G  R  R  F  I  A  V  K  S  N  P  T  I  *  Q  E  C  P  H  C  C  R  K  H  R  C  E  Y  L  L  A  *  S  G  T  T  S  C  Q  T  H  T  W  R  R  F  S  R  K  K  P  C  T  V  *  D  Q  N  S  Q  S  R  E  V  *  R  Q  T  D  F  Y  T  P  S  N  W  S  D  H  G  S  *  C  *  L  *  T  *  R  E  K  S  N  N  Y  *  P  *  F  M  G  Y  C  S  C  L  F  H  L  A  Y  S  H  S  H  C  I  H  F  L  L  G  S  T  C  E  I  P  T  I  C  S  S  W  H  T  K  C  S  C  T  C  N  S  *  A  K  Q  S  C  W  S  K  R  T  F  T  S  D  T  S  T  F  L  G  L  C  *  E  D  N  *  *  N  S  I  L  Q  T  R  L  *  E  E  G  *  P  S  E  H  L  L  A  Y  C  G  A  N  S  P  L  P  Y  S  P  F  C  L  C  *  I  C  Q  M  V  S  Q  V  I  A  K  G  L  E  S  G  C  K  L  Y  N  D  S  V  V  V  L  L  V  *  F  C  V  E  Y  C  K  L  C  V  I  G  Y  F  L  E  K  Q  P  H  L  P  K  N  S  Y  V  L  L  S  A  G  K  G  N  T  T  A  L  S  </first_frame>
            <second_frame>  V  D  P  P  Y  V  G  Y  V  K  P  W  V  D  L  D  T  G  N  S  Y  C  L  F  F  P  Y  S  P  E  S  L  V  L  A  T  P  K  S  G  G  I  K  Q  D  L  A  V  T  I  K  A  S  L  I  G  E  Q  N  I  S  G  S  A  S  A  L  F  V  G  G  F  I  I  P  G  T  E  G  D  S  L  Q  L  N  L  T  P  Q  F  N  R  S  V  L  T  V  V  G  N  T  D  V  S  I  Y  W  H  D  R  E  R  L  A  V  R  P  I  H  G  E  D  S  Q  G  R  S  R  A  Q  Y  E  I  K  I  R  R  A  E  K  F  K  D  K  L  I  F  T  L  P  A  T  G  Q  I  T  E  V  N  V  N  Y  E  P  E  E  R  R  A  T  I  I  N  L  N  L  W  A  T  A  A  A  C  F  I  L  L  I  V  T  A  T  V  F  I  S  Y  L  D  Q  P  V  R  S  R  P  S  A  P  P  G  T  P  S  V  A  A  P  V  T  P  E  R  S  S  P  A  G  V  S  E  H  S  P  R  T  P  Q  P  F  L  D  Y  V  R  R  T  I  D  E  T  P  Y  Y  R  Q  D  F  R  R  R  A  N  P  Q  N  T  Y  *  H  I  V  G  P  I  H  L  F  P  T  P  P  F  A  F  A  R  Y  A  K  W  F  L  R  *  L  P  K  V  L  N  L  A  A  N  F  T  M  I  V  L  *  F  C  W  C  N  F  V  *  S  I  A  S  C  V  S  L  D  T  F  *  R  S  S  L  I  C  Q  K  I  L  M  S  C  F  L  L  E  K  A  I  Q  Q  H  F  L </second_frame>
            <third_frame>   L  I  H  L  M  L  V  M  *  S  R  G  L  I  L  I  R  V  I  H  I  A  F  S  S  L  T  L  L  K  V  W  Y  L  P  L  Q  S  Q  E  A  L  N  R  I  *  L  L  L  L  R  H  H  *  S  E  S  R  I  S  Q  D  L  H  Q  H  F  L  L  E  V  S  S  F  R  E  R  K  E  I  H  C  S  *  I  *  P  H  N  L  T  G  V  S  S  L  L  *  E  T  Q  M  *  V  S  T  G  M  I  G  N  D  *  L  S  D  P  Y  M  E  K  I  L  K  E  E  A  V  H  S  M  R  S  K  F  A  E  Q  R  S  L  K  T  N  *  F  L  H  S  Q  Q  L  V  R  S  R  K  L  M  L  T  M  N  L  K  R  E  E  Q  Q  L  L  T  L  I  Y  G  L  L  Q  L  L  V  S  S  C  L  *  S  Q  P  L  Y  S  F  L  T  W  I  N  L  *  D  P  D  H  L  L  L  L  A  H  Q  V  *  L  H  L  *  L  L  S  E  A  V  L  L  E  *  A  N  I  H  L  G  H  L  N  L  S  W  I  M  L  G  G  Q  L  M  K  L  H  T  T  D  K  T  L  G  G  G  L  T  L  R  T  L  T  S  I  L  W  G  Q  F  T  S  S  L  L  P  L  L  P  L  L  D  M  P  N  G  F  S  G  N  C  Q  R  S  *  I  W  L  Q  T  L  Q  *  *  C  C  S  F  V  G  V  I  L  C  R  V  L  Q  A  V  C  H  W  I  L  S  R  E  A  A  S  S  A  K  K  F  L  C  P  A  F  C  W  K  R  Q  Y  N  S  T  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71172" stop="70366"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDPPYVGYVKPWVDLDTGNSYCLFFPYSPESLVLATPKSGGIKQDLAVTIKASLIGEQNISGSASALFVGGFIIPGTEGDSLQLNLTPQFNRSVLTVVGNTDVSIYWHDRERLAVRPIHGEDSQGRSRAQYEIKIRRAEKFKDKLIFTLPATGQITEVNVNYEPEERRATIINLNLWATAAACFILLIVTATVFISYLDQPVRSRPSAPPGTPSVAAPVTPERSSPAGVSEHSPRTPQPFLDYVRRTIDETPYYRQDFRRRANPQNTY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="101028" PGL_stop="105182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101028" e_stop="101285"/>
            <exon e_start="101360" e_stop="101411"/>
            <exon e_start="102787" e_stop="102882"/>
            <exon e_start="104118" e_stop="104182"/>
            <exon e_start="104454" e_stop="104587"/>
            <exon e_start="104643" e_stop="105182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.382" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.972" e_score="0.985"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.761"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101028" e_stop="101285" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101286" i_stop="101359" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101360" e_stop="101411" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.382">
            <gDNA_intron_boundary i_start="101412" i_stop="102786" i_length="1375"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102787" e_stop="102882" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.994">
            <gDNA_intron_boundary i_start="102883" i_stop="104117" i_length="1235"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="104118" e_stop="104182" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="0.972">
            <gDNA_intron_boundary i_start="104183" i_stop="104453" i_length="271"/>
          </intron>
          <exon e_serial="5" e_score="0.761">
            <gDNA_exon_boundary e_start="104454" e_stop="104587" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="104588" i_stop="104642" i_length="55"/>
          </intron>
          <exon e_serial="6" e_score="0.983">
            <gDNA_exon_boundary e_start="104643" e_stop="105182" e_length="540"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101028" stop="101285"/>
              <exon start="101360" stop="101411"/>
              <exon start="102787" stop="102882"/>
              <exon start="104118" stop="104182"/>
              <exon start="104454" stop="104587"/>
              <exon start="104643" stop="105182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584093" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAG : CTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGG : GACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCTTCATCAGAAATGTGGAAG : GTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCGTATGTCTTCTGCTGGTCTCATGAGATGTCTTTTGTTTTGACTGCATAAGTTTCTAAGAG : TTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTTAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGTTGTTACCAATTGTTGAAGCTATGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTACATAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGTGAGATGTCTCTCTGGATCCTTTTTACAGAAGTTGGGAGCTATAGAGTAAGGACTTAACATAAGAGCTAGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</gDNA_template>
            <first_frame> A  N  F  G  H  G  T  L  I  N  H  L  C  T  C  I  Q  L  F  K  Y  L  T  F  I  F  F  Y  F  L  L  S  V  H  F  I  R  I  L  L  S  G  K  *  *  Y  E  S  V  I  N  F  I  L  L  Q  V  I  S  F  I  F  C  *  Q  L  L  L  H  V  R  V  G  F  S  G  A  L  L  W  L  C  C  N  G  *  :  L  S  P  E  F  F  S  L  L  H  F  F  F  S  F  L  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M  D  W  E  G  K  E  P  Y  *  F  I  C  S  G  S   : G  L  V  L  F  L  K  M  S  K  V  R  S  E  R  A  S  S  E  M  W  K  :  V  A  G  L  A  V  V  S  V  L  C  F  T  L  S  E  L  S  P  Y  S  Q  I  Y  P  Y  V  F  C  W  S  H  E  M  S  F  V  L  T  A  *  V  S  K  S :   L  Y  I  S  S  H  G  F  I  L  F  Y  R  Y  P  L  K  L  V  F  L  T  E  S  L  I  L  N  S  R  L  Q  W  E  L  L  L  S  A  C  *  L  L  L  P  I  V  E  A  M  R  F  S  S  S  P  T  P  Y  T  *  E  L  L  T  V  V  N  *  M  K  K  A  E  H  G  G  R  N  Q  F  N  N  Q  R  L  L  *  *  C  Y  I  S  A  L  I  S  *  T  F  *  G  V  V  R  C  L  S  G  S  F  L  Q  K  L  G  A  I  E  *  G  L  N  I  R  A  R  L  G  H  I  R  Y  F  F  R  I  R  G  M  T  E  R  G  L  Q  L  I  C  S  T  K  N  A  S  S  V  Y  V  F  C  W  G  E  L  I  L  Q  C  S  S  F  L  Q  I  R  I  L  F   </first_frame>
            <second_frame>  L  I  L  D  M  E  L  *  *  T  T  C  A  R  V  Y  S  Y  L  N  T  L  P  L  S  S  F  I  F  Y  F  L  C  I  S  *  G  S  Y  C  P  A  S  N  S  M  N  R  S  L  T  L  F  S  C  R  L  F  P  L  F  F  V  D  S  C  C  C  M  *  G  L  D  F  L  A  H  S  C  G  F  V  V  M  G  S :   F  H  Q  N  S  F  P  C  C  I  S  S  S  P  F  F  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  I  G  R  G  R  N  P  I  D  S  S  V  L  A  R  :  D  W  Y  C  S  *  K  *  A  K  *  D  L  K  G  L  H  Q  K  C  G  R :   L  Q  A  W  Q  L  F  L  F  Y  V  S  L  *  V  S  C  R  L  I  H  R  Y  T  R  M  S  S  A  G  L  M  R  C  L  L  F  *  L  H  K  F  L  R   : V  C  T  S  L  L  M  V  L  Y  Y  F  I  G  T  L  *  N  L  C  S  L  L  K  A  *  F  *  I  L  D  F  S  G  N  F  C  F  L  P  A  N  C  C  Y  Q  L  L  K  L  *  D  S  P  Q  A  Q  P  L  I  P  R  S  Y  *  L  *  L  I  R  *  K  R  L  N  M  V  E  G  T  N  L  I  I  R  G  C  S  D  D  V  T  *  V  H  *  Y  R  K  H  F  E  E  L  *  D  V  S  L  D  P  F  Y  R  S  W  E  L  *  S  K  D  L  T  *  E  L  D  W  D  I  L  D  I  S  L  E  F  G  A  *  L  R  G  D  S  S  *  F  V  Q  P  R  M  Q  V  A  C  T  C  F  V  G  G  S  *  S  Y  N  A  V  L  S  Y  K  L  E  F  Y  S  </second_frame>
            <third_frame>   *  F  W  T  W  N  F  D  K  P  P  V  H  V  Y  T  V  I  *  I  P  Y  L  Y  L  L  L  F  F  T  F  C  A  F  H  K  D  L  T  V  R  Q  V  I  V  *  I  G  H  *  L  Y  S  P  A  G  Y  F  L  Y  F  L  L  T  V  V  A  A  C  K  G  W  I  F  W  R  T  P  V  A  L  L  *  W  V   : A  F  T  R  I  L  F  L  A  A  F  L  L  L  L  S  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G  L  G  G  E  G  T  L  L  I  H  L  F  W  L  G :   T  G  I  V  L  E  N  E  Q  S  E  I  *  K  G  F  I  R  N  V  E   : G  C  R  L  G  S  C  F  C  S  M  F  H  F  K  *  A  V  A  L  F  T  D  I  P  V  C  L  L  L  V  S  *  D  V  F  C  F  D  C  I  S  F  *  E  :  F  V  H  L  F  S  W  F  Y  I  I  L  *  V  P  F  K  T  C  V  P  Y  *  K  L  D  F  K  F  *  T  S  V  G  T  S  A  F  C  L  L  I  V  V  T  N  C  *  S  Y  E  I  L  L  K  P  N  P  L  Y  L  G  A  T  N  C  S  *  L  D  E  K  G  *  T  W  W  K  E  P  I  *  *  S  E  V  A  L  M  M  L  H  K  C  I  N  I  V  N  I  L  R  S  C  E  M  S  L  W  I  L  F  T  E  V  G  S  Y  R  V  R  T  *  H  K  S  *  I  G  T  Y  *  I  F  L  *  N  S  G  H  D  *  E  G  T  P  V  N  L  F  N  Q  E  C  K  *  R  V  R  V  L  L  G  G  A  D  L  T  M  Q  F  F  P  T  N  *  N  F  I  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101239" stop="101285"/>
                    <exon start="101360" stop="101411"/>
                    <exon start="102787" stop="102882"/>
                    <exon start="104118" stop="104135"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLDFLAHSCGFVVMGSFHQNSFPCCISSSPFFLVTLLVFLLMLVAAVLIWIGRGRNPIDSSVLARDWYCS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102864" stop="102882"/>
                    <exon start="104118" stop="104182"/>
                    <exon start="104454" stop="104576"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FICSGSGLVLFLKMSKVRSERASSEMWKVAGLAVVSVLCFTLSELSPYSQIYPYVFCWSHEMSFVLTA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="105447" PGL_stop="106216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105447" e_stop="106216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="105447" e_stop="106216" e_length="770"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105447" stop="106216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569563" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAACACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCGTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATTGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACAACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTGGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</gDNA_template>
            <first_frame> V  S  S  H  V  H  H  D  L  G  *  G  I  C  R  K  C  M  F  F  H  K  G  Y  S  L  I  K  *  N  G  K  K  L  K  T  K  N  T  N  Y  L  S  P  R  T  L  H  *  G  R  E  I  M  V  G  E  A  M  C  V  R  I  I  L  A  V  H  *  I  F  R  K  I  H  K  L  A  R  I  A  A  *  Q  L  K  D  N  L  Y  K  H  C  F  L  P  F  T  E  H  Q  N  P  K  E  N  M  E  G  S  A  E  S  M  K  N  S  T  F  C  T  G  G  L  S  T  H  L  L  I  F  I  I  L  H  S  L  D  L  Q  T  C  T  N  V  F  *  A  L  W  M  Q  V  S  R  A  S  P  I  *  S  S  D  G  I  V  H  *  L  V  I  F  S  *  K  R  G  I  D  N  T  K  N  E  T  T  S  Q  L  S  G  W  C  C  G  *  V  I  E  E  S  S  T  Q  R  E  N  N  T  P  C  I  *  A  R  W  V  A  Q  G  I  H  A  C  I  T  W  I  S  V  Y  I  K  H  C  N  E  L  S  K  F  Y  R  F  F  F  V  D  I  M  R  F  *  I  F  L   </first_frame>
            <second_frame>  F  L  V  M  C  I  M  I  L  A  R  E  Y  V  E  N  A  C  S  F  I  R  A  I  H  *  S  N  E  M  G  K  S  *  R  Q  R  T  Q  I  I  Y  L  L  A  H  Y  T  R  D  G  K  S  W  *  V  K  L  C  V  *  E  S  F  *  L  S  I  K  F  F  V  R  S  T  N  S  P  E  L  Q  L  S  S  *  K  T  T  Y  T  N  I  V  F  Y  L  S  P  N  I  K  T  Q  K  R  I  W  K  E  V  Q  N  Q  *  R  T  Q  L  S  A  L  E  V  F  P  L  I  Y  *  F  S  L  Y  Y  I  R  W  I  Y  K  L  V  P  M  C  S  E  H  C  G  C  R  S  Q  G  R  A  P  Y  D  H  L  M  E  L  Y  I  D  W  *  F  S  A  R  N  E  G  L  T  I  L  K  M  R  Q  L  L  S  *  V  V  G  V  V  V  E  *  S  K  K  A  Q  L  N  G  K  I  I  P  H  V  S  K  Q  G  G  L  L  R  V  Y  M  P  A  *  L  G  F  L  Y  I  S  N  I  A  M  N  F  P  N  F  T  D  S  F  L  L  I  *  *  G  F  R  F  F  L  </second_frame>
            <third_frame>   F  *  S  C  A  S  *  S  W  L  G  N  M  *  K  M  H  V  L  S  *  G  L  F  T  D  Q  M  K  W  E  K  V  E  D  K  E  H  K  L  F  I  S  S  H  I  T  L  G  T  G  N  H  G  R  *  S  Y  V  C  E  N  H  F  S  C  P  L  N  F  S  *  D  P  Q  T  R  Q  N  C  S  L  A  V  E  R  Q  L  I  Q  T  L  F  F  T  F  H  R  T  S  K  P  K  R  E  Y  G  R  K  C  R  I  N  E  E  L  N  F  L  H  W  R  S  F  H  S  F  I  D  F  H  Y  I  T  F  V  G  F  T  N  L  Y  Q  C  V  L  S  I  V  D  A  G  L  K  G  E  P  H  M  I  I  *  W  N  C  T  L  I  G  D  F  Q  L  E  T  R  D  *  Q  Y  *  K  *  D  N  F  S  V  E  W  L  V  L  W  L  S  D  R  R  K  L  N  S  T  G  K  *  Y  P  M  Y  L  S  K  V  G  C  S  G  Y  T  C  L  H  N  L  D  F  C  I  Y  Q  T  L  Q  *  T  F  Q  I  L  Q  I  L  F  C  *  Y  N  E  V  L  D  F  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105665" stop="105934"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DPQTRQNCSLAVERQLIQTLFFTFHRTSKPKREYGRKCRINEELNFLHWRSFHSFIDFHYITFVGFTNLYQCVLSIVDAGLKGEPHMII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="116677" PGL_stop="128365"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116677" e_stop="117097"/>
            <exon e_start="121152" e_stop="121202"/>
            <exon e_start="123276" e_stop="123309"/>
            <exon e_start="124866" e_stop="124952"/>
            <exon e_start="125024" e_stop="125075"/>
            <exon e_start="126273" e_stop="126441"/>
            <exon e_start="127028" e_stop="127079"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="0.971"/>
          <exon-intron don_prob="0.990" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.568" e_score="0.989"/>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.812" acc_prob="0.814" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="116677" e_stop="117097" e_length="421"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="117098" i_stop="121151" i_length="4054"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121152" e_stop="121202" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.967">
            <gDNA_intron_boundary i_start="121203" i_stop="123275" i_length="2073"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123276" e_stop="123309" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.541">
            <gDNA_intron_boundary i_start="123310" i_stop="124865" i_length="1556"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="124866" e_stop="124952" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.873" acc_prob="0.568">
            <gDNA_intron_boundary i_start="124953" i_stop="125023" i_length="71"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="125024" e_stop="125075" e_length="52"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125076" i_stop="126272" i_length="1197"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="126273" e_stop="126441" e_length="169"/>
          </exon>
          <intron i_serial="6" don_prob="0.812" acc_prob="0.814">
            <gDNA_intron_boundary i_start="126442" i_stop="127027" i_length="586"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="127028" e_stop="127079" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116677" stop="117097"/>
              <exon start="121152" stop="121202"/>
              <exon start="123276" stop="123309"/>
              <exon start="124866" stop="124952"/>
              <exon start="125024" stop="125075"/>
              <exon start="126273" stop="126441"/>
              <exon start="127028" stop="127079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584094" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAGTATCGTTTTGGATACCATTTCATTTTCTTTTTTACTTACTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATACATATATACATATATATATATATATATATATATATATATATATATATAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG : TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA : GTATTTCACTTGATGATTGGATCTTCAAATTTGG : GTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGG : CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG : GGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</gDNA_template>
            <first_frame> A  N  S  K  K  K  I  P  S  R  L  H  K  E  K  K  K  *  G  E  L  G  E  Y  R  F  G  Y  H  F  I  F  F  F  T  Y  F  K  T  C  L  L  *  V  F  W  V  H  I  Y  T  Y  I  H  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  K  L  I  I  I  L  C  V  H  V  F  F  S  V  L  E  G  K  G  L  R  R  I  E  A  V  D  G  F  L  K  G  K  E  K  E  *  E  E  H  D  *  V  E  R  R  D  L  L  S  *  G  F  N  G  S  E  C  G  S  C  F  C  R  C  R  Y  C  S  S  C  F  C  S   : V  N  E  N  S  L  S  E  Y  T  Q  W  L  D  S  S  E   : S  I  S  L  D  D  W  I  F  K  F  G :   L  F  P  L  F  Y  F  D  N  C  C  R  M  *  W  L  D  F  L  V  A  L  L  W  L  C  R  Y  G :   F  P  Q  N  S  F  P  C  G  I  S  S  S  P  F  F  L  :  G  *  S  L  S  S  V  K  *  *  R  R  *  R  *  C  I  *  P  S  R  S  F  V  G  E  E  Q  A  K  F  K  C  *  *  S  P  K  M  L  L  F  S  C  C  Q  S  G  K  P  P  K  S  C  G  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M   </first_frame>
            <second_frame>  Q  I  Q  R  K  R  Y  H  R  G  C  I  K  R  K  K  S  K  G  N  *  E  S  I  V  L  D  T  I  S  F  S  F  L  L  T  S  R  L  V  C  C  K  C  F  G  Y  I  Y  I  H  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  S  L  S  S  Y  C  V  S  T  F  F  S  L  Y  *  R  G  K  G  *  E  G  L  R  Q  W  M  V  F  *  K  V  K  K  K  S  E  K  N  M  I  E  W  R  E  G  T  C  Y  P  K  A  L  M  G  V  N  V  G  L  A  S  V  D  A  V  I  A  V  L  A  F  A  Q  :  L  M  R  I  H  S  R  N  T  H  N  G  W  T  R  Q  K  :  V  F  H  L  M  I  G  S  S  N  L   : G  Y  F  L  Y  F  I  L  T  I  V  A  A  C  N  G  W  I  F  W  S  H  S  C  G  F  V  V  M   : A  F  P  K  I  L  F  L  A  A  F  L  L  L  L  S  F  W :   V  D  L  C  H  Q  S  N  D  E  E  D  E  D  D  V  Y  S  P  R  E  A  L  L  E  K  N  K  P  N  S  N  A  D  S  R  R  R  C  C  S  F  R  A  V  K  V  G  S  R  Q  K  V  V  V  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  </second_frame>
            <third_frame>   K  F  K  E  K  D  T  I  E  A  A  *  R  E  K  K  V  R  G  I  R  R  V  S  F  W  I  P  F  H  F  L  F  Y  L  L  Q  D  L  F  V  V  S  V  L  G  T  Y  I  Y  I  Y  T  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  *  A  Y  H  H  I  V  C  P  R  F  F  L  C  I  R  G  E  R  A  K  K  D  *  G  S  G  W  F  F  K  R  *  R  K  R  V  R  R  T  *  L  S  G  E  K  G  L  V  I  L  R  L  *  W  E  *  M  W  V  L  L  L  S  M  P  L  L  Q  F  L  L  L  L  S :   *  *  E  F  T  L  G  I  H  T  M  A  G  L  V  R  K :   Y  F  T  *  *  L  D  L  Q  I  W  :  V  I  S  F  I  L  F  *  Q  L  L  P  H  V  M  V  G  F  S  G  R  T  P  V  A  L  S  L  W  :  L  S  P  K  F  F  S  L  R  H  F  F  F  S  F  L  S   : G  L  I  F  V  I  S  Q  M  M  K  K  M  K  M  M  Y  I  A  L  E  K  L  C  W  R  R  T  S  Q  I  Q  M  L  I  V  A  E  D  A  A  L  F  V  L  S  K  W  E  A  A  K  K  L  W  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116966" stop="117097"/>
                    <exon start="121152" stop="121202"/>
                    <exon start="123276" stop="123309"/>
                    <exon start="124866" stop="124952"/>
                    <exon start="125024" stop="125075"/>
                    <exon start="126273" stop="126441"/>
                    <exon start="127028" stop="127078"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVKKKSEKNMIEWREGTCYPKALMGVNVGLASVDAVIAVLAFAQLMRIHSRNTHNGWTRQKVFHLMIGSSNLGYFLYFILTIVAACNGWIFWSHSCGFVVMAFPKILFLAAFLLLLSFWVDLCHQSNDEEDEDDVYSPREALLEKNKPNSNADSRRRCCSFRAVKVGSRQKVVVLVTLLVFLLMLVAAVLIW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="116893" e_stop="117097"/>
            <exon e_start="121152" e_stop="121202"/>
            <exon e_start="123276" e_stop="123309"/>
            <exon e_start="125024" e_stop="125075"/>
            <exon e_start="126292" e_stop="126441"/>
            <exon e_start="127028" e_stop="127123"/>
            <exon e_start="127692" e_stop="127752"/>
            <exon e_start="128351" e_stop="128365"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="0.995"/>
          <exon-intron don_prob="0.990" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.568" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.812" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.040" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="116893" e_stop="117097" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="117098" i_stop="121151" i_length="4054"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121152" e_stop="121202" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.967">
            <gDNA_intron_boundary i_start="121203" i_stop="123275" i_length="2073"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123276" e_stop="123309" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.568">
            <gDNA_intron_boundary i_start="123310" i_stop="125023" i_length="1714"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="125024" e_stop="125075" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.983">
            <gDNA_intron_boundary i_start="125076" i_stop="126291" i_length="1216"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="126292" e_stop="126441" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.812" acc_prob="0.814">
            <gDNA_intron_boundary i_start="126442" i_stop="127027" i_length="586"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="127028" e_stop="127123" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.040">
            <gDNA_intron_boundary i_start="127124" i_stop="127691" i_length="568"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="127692" e_stop="127752" e_length="61"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.994">
            <gDNA_intron_boundary i_start="127753" i_stop="128350" i_length="598"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="128351" e_stop="128365" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116893" stop="117097"/>
              <exon start="121152" stop="121202"/>
              <exon start="123276" stop="123309"/>
              <exon start="125024" stop="125075"/>
              <exon start="126292" stop="126441"/>
              <exon start="127028" stop="127123"/>
              <exon start="127692" stop="127752"/>
              <exon start="128351" stop="128365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587655" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG : TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA : GTATTTCACTTGATGATTGGATCTTCAAATTTGG : CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG : TCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGG : GTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATG : GACTGGTATTGTTCT</gDNA_template>
            <first_frame> C  V  H  V  F  F  S  V  L  E  G  K  G  L  R  R  I  E  A  V  D  G  F  L  K  G  K  E  K  E  *  E  E  H  D  *  V  E  R  R  D  L  L  S  *  G  F  N  G  S  E  C  G  S  C  F  C  R  C  R  Y  C  S  S  C  F  C  S   : V  N  E  N  S  L  S  E  Y  T  Q  W  L  D  S  S  E   : S  I  S  L  D  D  W  I  F  K  F  G :   F  P  Q  N  S  F  P  C  G  I  S  S  S  P  F  F  L  :  S  N  D  E  E  D  E  D  D  V  Y  S  P  R  E  A  L  L  E  K  N  K  P  N  S  N  A  D  S  R  R  R  C  C  S  F  R  A  V  K  V  G  S  R  Q  K  V  V  V  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  I  G  R  G  R  N  P  I  D  S  S  V  V  A  R  :  V  Y  V  D  L  F  A  L  A  V  L  L  L  G  V  A  L  A  C  Y   : G  L  V  L  F  </first_frame>
            <second_frame>  V  S  T  F  F  S  L  Y  *  R  G  K  G  *  E  G  L  R  Q  W  M  V  F  *  K  V  K  K  K  S  E  K  N  M  I  E  W  R  E  G  T  C  Y  P  K  A  L  M  G  V  N  V  G  L  A  S  V  D  A  V  I  A  V  L  A  F  A  Q  :  L  M  R  I  H  S  R  N  T  H  N  G  W  T  R  Q  K  :  V  F  H  L  M  I  G  S  S  N  L   : A  F  P  K  I  L  F  L  A  A  F  L  L  L  L  S  F  C :   Q  M  M  K  K  M  K  M  M  Y  I  A  L  E  K  L  C  W  R  R  T  S  Q  I  Q  M  L  I  V  A  E  D  A  A  L  F  V  L  S  K  W  E  A  A  K  K  L  W  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G  L  G  G  E  G  T  L  L  I  H  L  L  W  L  G :   C  M  *  I  S  L  P  *  Q  F  F  C  W  E  W  H  W  H  A  M  :  D  W  Y  C  S </second_frame>
            <third_frame>   C  P  R  F  F  L  C  I  R  G  E  R  A  K  K  D  *  G  S  G  W  F  F  K  R  *  R  K  R  V  R  R  T  *  L  S  G  E  K  G  L  V  I  L  R  L  *  W  E  *  M  W  V  L  L  L  S  M  P  L  L  Q  F  L  L  L  L  S :   *  *  E  F  T  L  G  I  H  T  M  A  G  L  V  R  K :   Y  F  T  *  *  L  D  L  Q  I  W  :  L  S  P  K  F  F  S  L  R  H  F  F  F  S  F  L  S   : V  K  *  *  R  R  *  R  *  C  I  *  P  S  R  S  F  V  G  E  E  Q  A  K  F  K  C  *  *  S  P  K  M  L  L  F  S  C  C  Q  S  G  K  P  P  K  S  C  G  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M  D  W  E  G  K  E  P  Y  *  F  I  C  C  G  S   : G  V  C  R  S  L  C  L  S  S  S  F  A  G  S  G  I  G  M  L  W :   T  G  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117028" stop="117097"/>
                    <exon start="121152" stop="121202"/>
                    <exon start="123276" stop="123309"/>
                    <exon start="125024" stop="125075"/>
                    <exon start="126292" stop="126441"/>
                    <exon start="127028" stop="127123"/>
                    <exon start="127692" stop="127752"/>
                    <exon start="128351" stop="128364"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFNGSECGSCFCRCRYCSSCFCSVNENSLSEYTQWLDSSESISLDDWIFKFGFPQNSFPCGISSSPFFLSNDEEDEDDVYSPREALLEKNKPNSNADSRRRCCSFRAVKVGSRQKVVVLVTLLVFLLMLVAAVLIWIGRGRNPIDSSVVARVYVDLFALAVLLLGVALACYGLVLF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="129645" PGL_stop="130577"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129645" e_stop="129817"/>
            <exon e_start="130284" e_stop="130577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="0.988"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="129645" e_stop="129817" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="129818" i_stop="130283" i_length="466"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="130284" e_stop="130577" e_length="294"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129645" stop="129817"/>
              <exon start="130284" stop="130577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595196" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCCAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAG : GTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAACTAAGTAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAG</gDNA_template>
            <first_frame> I  F  Q  V  L  L  Y  L  Q  H  L  C  Y  G  *  *  E  N  Y  H  L  H  L  S  L  S  V  N  R  S  R  G  Q  *  L  L  *  M  T  V  Q  R  Q  Y  S  L  S  D  G  Q  L  L  Q  V  C  K  I  R :   S  Q  G  R  A  P  Y  D  H  R  D  G  I  C  K  L  I  G  D  F  Q  L  E  *  R  T  D  N  T  K  N  E  R  T  S  Q  L  S  G  R  C  C  G  *  V  I  E  E  S  S  T  Q  R  I  K  N  T  P  C  N  *  V  R  W  L  L  R  V  H  M  P  A  *  L  G  F  L  Y  I  A  M  N  F  L  N  F  T  D  S  F  L  L  I  *  *  G  F   </first_frame>
            <second_frame>  F  S  R  F  F  Y  T  F  S  I  C  A  M  G  D  E  R  T  T  T  S  T  C  H  F  Q  S  T  G  V  E  D  N  S  F  Y  K  *  Q  F  S  D  S  T  A  S  A  M  D  S  C  C  K  C  A  K  S   : G  L  K  G  E  P  H  M  I  T  V  M  E  F  V  N  *  L  V  I  F  S  *  S  E  G  L  T  I  L  K  M  K  E  L  L  S  *  V  V  G  V  V  V  E  *  S  K  K  A  Q  L  N  G  *  K  I  P  L  A  T  K  *  G  G  C  S  G  Y  T  C  L  H  N  L  D  S  C  T  *  Q  *  T  F  *  I  L  Q  I  L  F  C  *  Y  N  E  V  L  </second_frame>
            <third_frame>   F  P  G  S  S  I  P  S  A  F  V  L  W  V  M  R  E  L  P  P  P  L  V  T  F  S  Q  Q  E  S  R  T  I  A  F  I  N  D  S  S  A  T  V  Q  P  Q  R  W  T  A  A  A  S  V  Q  N  Q  :  V  S  R  A  S  P  I  *  S  P  *  W  N  L  *  I  D  W  *  F  S  A  R  V  K  D  *  Q  Y  *  K  *  K  N  F  S  V  E  W  S  V  L  W  L  S  D  R  R  K  L  N  S  T  D  K  K  Y  P  L  Q  L  S  K  V  V  A  Q  G  T  H  A  C  I  T  W  I  L  V  H  S  N  E  L  S  K  F  Y  R  F  F  F  V  D  I  M  R  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130380" stop="130577"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNFSVEWSVLWLSDRRKLNSTDKKYPLQLSKVVAQGTHACITWILVHSNELSKFYRFFFVDIMRF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129647" stop="129817"/>
                    <exon start="130284" stop="130307"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPGSSIPSAFVLWVMRELPPPLVTFSQQESRTIAFINDSSATVQPQRWTAAASVQNQVSRASPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="133967" PGL_stop="130867"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133967" e_stop="133592"/>
            <exon e_start="133477" e_stop="133253"/>
            <exon e_start="133078" e_stop="132968"/>
            <exon e_start="132244" e_stop="132183"/>
            <exon e_start="131375" e_stop="130867"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.819" acc_prob="0.995" e_score="0.992"/>
          <exon-intron don_prob="0.845" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="133967" e_stop="133592" e_length="376"/>
          </exon>
          <intron i_serial="1" don_prob="0.819" acc_prob="0.995">
            <gDNA_intron_boundary i_start="133591" i_stop="133478" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="133477" e_stop="133253" e_length="225"/>
          </exon>
          <intron i_serial="2" don_prob="0.845" acc_prob="0.998">
            <gDNA_intron_boundary i_start="133252" i_stop="133079" i_length="174"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="133078" e_stop="132968" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.865" acc_prob="0.976">
            <gDNA_intron_boundary i_start="132967" i_stop="132245" i_length="723"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="132244" e_stop="132183" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.798">
            <gDNA_intron_boundary i_start="132182" i_stop="131376" i_length="807"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="131375" e_stop="130867" e_length="509"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133967" stop="133592"/>
              <exon start="133477" stop="133253"/>
              <exon start="133078" stop="132968"/>
              <exon start="132244" stop="132183"/>
              <exon start="131375" stop="130867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133878" stop="133592"/>
              <exon start="133477" stop="133371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAACTTAAGGGACTATTGTAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTC : ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTG : GTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTT : GTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAG : ATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAATTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAG</gDNA_template>
            <first_frame> S  N  L  R  D  Y  C  R  K  Y  F  S  Q  L  S  L  H  R  R  M  H  N  *  T  T  K  F  R  A  V  F  A  V  R  Q  S  E  I  A  Q  L  N  S  G  G  R  V  R  R  R  V  E  V  W  V  T  V  V  L  F  R  L  I  L  S  S  I  L  I  G  E  I  A  S  L  G  L  R  C  R  L  T  N  N  G  S  E  K  S  E  A  I  D  A  F  Y  Q  R  S  I  S  A  N  I  T  R  S  Q  I  P  L  W  Y  S  C  G  Q  Q  L  Y  L  H  L  S  S   : H  S  R  S  K  H  A  S  N  V  *  S  D  W  R  S  C  F  G  *  K  A  I  N  S  V  *  E  N  A  T  W  R  C  S  A  S  A  *  P  *  E  P  E  K  N  C  D  Q  K  N  H  G  H  G  *  *  Y  C  *  I  C  C  G  S  C  K  *  W  N  R  T  Y  Y  C   : G  T  R  W  T  C  L  D  *  R  G  *  Q  I  Q  Y  Q  R  F  E  E  L  W  T  C  T  L  W  T  C  T  G  Q  S  L  L  A   : C  M  A  S  *  K  F  W  I  S  R  K  R  S  T  V  N  Q  P  F  K  :  I  W  S  M  L  V  E  Y  S  L  T  S  L  D  F  K  Q  F  T  E  D  G  N  W  W  V  A  L  L  L  C  S  R  W  K  T  G  R  K  S  C  *  I  Y  S  V  N  V  F  L  *  L  Q  R  V  H  G  F  A  *  F  A  L  E  V  P  L  L  M  H  *  L  E  G  F  F  F  Y  F  T  L  S  L  F  F  F  Q  K  S  R  L  D  *  W  D  L  A  V  T  S  R  I  N  L  S  L  C  S  Q  C  Y  R  W  E  V  T  C  T  W  S  L  R  C  R  Q  A  L  P  K  H  S  T  T  F  *  F  S  F  F  *  *  L  H  V  P  L  N  N  T  V  V  N  F  L  I  L  I  N  *  C  I  Y  P  K  A  R  S  *  A   </first_frame>
            <second_frame>  Q  T  *  G  T  I  V  E  N  I  F  L  N  F  L  Y  T  G  E  C  T  I  R  P  P  N  S  G  L  C  S  L  C  V  N  R  R  L  H  N  *  I  A  G  A  V  F  A  V  E  *  R  S  G  L  L  W  Y  S  F  A  *  F  C  H  P  F  *  L  V  R  *  P  L  *  G  *  D  A  D  *  L  I  M  G  L  K  N  L  K  Q  L  T  P  F  I  K  E  A  F  Q  Q  T  L  L  V  A  K  F  L  C  G  I  H  V  V  N  S  Y  I  C  T  L  A  L  :  T  Q  G  P  S  M  L  P  T  F  S  L  T  G  D  L  V  L  A  E  R  L  S  T  R  F  E  K  M  Q  R  G  D  V  V  L  V  R  S  P  E  N  P  R  K  I  V  I  K  R  I  M  G  M  G  S  D  T  V  R  Y  V  V  D  H  A  N  N  G  I  E  H  T  I  V  :  V  P  D  G  H  V  W  I  E  G  D  N  K  F  N  T  N  D  S  R  N  F  G  P  V  P  Y  G  L  V  Q  G  R  V  F  W  L  :  V  W  P  P  E  N  F  G  S  V  G  R  E  V  Q  *  I  N  L  S  R :   F  G  V  C  L  *  S  I  L  S  Q  A  W  I  L  N  N  L  L  K  M  A  T  G  G  L  L  Y  Y  F  V  R  G  G  R  Q  D  A  R  A  V  K  Y  I  R  L  M  Y  F  S  S  S  K  G  C  T  V  L  H  N  L  L  L  K  C  H  C  *  C  I  S  S  K  A  S  F  S  I  L  L  C  R  C  S  S  F  K  R  V  V  W  T  N  G  I  W  Q  S  L  L  V  *  T  *  A  F  V  V  S  V  T  A  G  K  L  H  V  P  G  L  *  G  A  G  K  L  C  Q  N  T  A  L  H  F  N  S  H  F  S  D  S  Y  M  F  L  *  I  I  Q  *  *  I  F  *  F  *  L  T  D  V  Y  I  Q  K  L  G  V  K  L  </second_frame>
            <third_frame>   K  L  K  G  L  L  *  K  I  F  F  S  T  F  S  T  P  E  N  A  Q  L  D  H  Q  I  P  G  C  V  R  C  A  S  I  G  D  C  T  I  K  *  R  G  P  C  S  P  S  S  R  G  L  G  Y  C  G  T  L  S  P  D  S  V  I  H  F  N  W  *  D  S  L  F  R  V  E  M  Q  I  D  *  *  W  V  *  K  I  *  S  N  *  R  L  L  S  K  K  H  F  S  K  H  Y  S  *  P  N  S  S  V  V  F  M  W  S  T  A  I  S  A  P  *  L  S :   L  K  V  Q  A  C  F  Q  R  L  V  *  L  E  I  L  F  W  L  K  G  Y  Q  L  G  L  R  K  C  N  V  E  M  *  C  *  C  V  A  L  R  T  R  E  K  L  *  S  K  E  S  W  A  W  V  V  I  L  L  D  M  L  W  I  M  Q  I  M  E  *  N  I  L  L  W :   Y  Q  M  D  M  F  G  L  K  G  I  T  N  S  I  P  T  I  R  G  T  L  D  L  Y  L  M  D  L  Y  R  A  E  S  F  G  L :   Y  G  L  L  K  I  L  D  Q  *  E  E  K  Y  S  K  S  T  F  Q   : D  L  E  Y  A  C  R  V  F  S  H  K  P  G  F  *  T  I  Y  *  R  W  Q  L  V  G  C  F  T  T  L  F  E  V  E  D  R  T  Q  E  L  L  N  I  F  G  *  C  I  S  L  A  P  K  G  A  R  F  C  I  I  C  S  *  S  A  T  A  N  A  L  A  R  R  L  L  F  L  F  Y  F  V  V  V  L  L  S  K  E  S  F  G  L  M  G  F  G  S  H  F  S  Y  K  L  E  P  L  *  S  V  L  P  L  G  S  Y  M  Y  L  V  S  K  V  Q  A  S  F  A  K  T  Q  H  Y  I  L  I  L  I  F  L  I  V  T  C  S  F  K  *  Y  S  S  K  F  F  N  F  N  *  L  M  Y  I  S  K  S  *  E  L  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133723" stop="133592"/>
                    <exon start="133477" stop="133253"/>
                    <exon start="133078" stop="132968"/>
                    <exon start="132244" stop="132197"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIMGLKNLKQLTPFIKEAFQQTLLVAKFLCGIHVVNSYICTLALTQGPSMLPTFSLTGDLVLAERLSTRFEKMQRGDVVLVRSPENPRKIVIKRIMGMGSDTVRYVVDHANNGIEHTIVVPDGHVWIEGDNKFNTNDSRNFGPVPYGLVQGRVFWLVWPPENFGSVGREVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="140404" PGL_stop="143963"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="140404" e_stop="140583"/>
            <exon e_start="141185" e_stop="141320"/>
            <exon e_start="141731" e_stop="141904"/>
            <exon e_start="142486" e_stop="142991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.588" acc_prob="0.989" e_score="0.961"/>
          <exon-intron don_prob="0.802" acc_prob="0.941" e_score="0.993"/>
          <exon-intron don_prob="0.964" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="140404" e_stop="140583" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.588" acc_prob="0.989">
            <gDNA_intron_boundary i_start="140584" i_stop="141184" i_length="601"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="141185" e_stop="141320" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.802" acc_prob="0.941">
            <gDNA_intron_boundary i_start="141321" i_stop="141730" i_length="410"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="141731" e_stop="141904" e_length="174"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.996">
            <gDNA_intron_boundary i_start="141905" i_stop="142485" i_length="581"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="142486" e_stop="142991" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140404" stop="140583"/>
              <exon start="141185" stop="141320"/>
              <exon start="141731" stop="141904"/>
              <exon start="142486" stop="142991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATCTTTTTTTTTTTTTTCATTTGG : TGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG : ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAG : GCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</gDNA_template>
            <first_frame> *  *  S  P  P  Y  P  *  P  L  P  P  L  F  T  R  I  S  Q  *  Q  T  T  S  F  C  F  N  I  C  I  *  H  S  P  L  P  S  L  E  K  K  F  R  K  S  S  E  E  T  T  K  I  F  F  F  F  F  I  W  :  W  L  G  L  K  T  I  I  Y  C  T  G  P  I  N  M  P  W  A  F  S  S  L  S  Y  C  V  K  C  V  R  F  V  V  F  F  R  V  I  L  *  P  I  L  L   : D  C  G  I  T  L  F  S  V  L  *  Y  F  L  I  L  V  Y  L  E  V  E  N  V  H  C  D  Y  L  E  E  I  Q  S  S  *  R  S  W  *  D  *  N  A  C  G  E  C  C  L  L  P  I  D  A  S  L  S   : G  *  V  L  P  S  V  A  *  T  C  N  V  V  C  *  S  V  S  F  G  E  V  G  I  A  Y  F  L  L  L  L  F  S  K  A  L  L  K  L  G  F  V  A  S  L  S  V  Y  T  K  S  E  *  P  H  *  A  L  N  V  V  T  V  D  W  N  C  Q  C  F  L  L  Q  L  I  H  L  E  H  Y  S  L  L  P  V  P  F  V  T  L  S  Y  F  N  F  *  N  I  P  S  G  K  H  F  S  S  P  V  Y  W  I  F  D  L  V  T  H  A  E  *  L  S  I  F  P  S  N  S  K  A  F  C  L  S  G  R  P  S  S  W  W  *  Y  I  *  Y  S  C  S  I  R  L  *  Y  N  G  T  S  Y  *  F  Q  I  F  C  A  L  S </first_frame>
            <second_frame>  S  S  P  L  P  T  P  N  P  Y  P  L  S  S  L  A  Y  P  N  N  K  P  R  A  S  A  S  T  F  A  S  D  T  H  L  F  P  L  *  K  K  N  S  E  N  L  V  K  K  Q  Q  R  S  F  F  F  F  S  F  G :   G  L  D  *  R  L  *  Y  T  A  L  D  Q  S  T  C  R  G  H  F  L  L  *  V  I  V  *  S  V  C  A  L  W  Y  S  F  V  *  F  C  N  P  F  Y  L  :  I  A  E  S  L  Y  F  L  S  C  D  I  S  *  Y  *  S  I  W  R  L  R  M  Y  I  A  I  T  L  K  R  Y  R  A  V  K  E  A  G  E  I  K  M  H  V  G  S  V  A  Y  Y  Q  L  M  L  V  C  Q  :  A  E  Y  F  R  Q  L  L  K  P  V  T  *  S  A  K  V  *  A  L  G  R  L  G  L  L  T  S  C  C  S  Y  S  A  K  P  C  *  S  W  D  L  L  L  L  F  Q  C  I  R  N  Q  N  D  L  I  K  H  *  M  W  L  L  L  I  G  I  V  S  A  F  Y  Y  N  *  Y  T  L  N  I  T  L  F  C  L  C  L  S  *  L  L  A  T  L  I  F  K  T  S  Q  V  E  N  T  F  L  V  Q  F  I  G  S  L  T  *  L  L  M  Q  N  N  Y  Q  F  S  P  Q  I  Q  K  P  F  V  S  L  E  D  Q  A  A  G  G  N  I  F  D  I  P  V  P  S  V  F  D  T  M  A  L  P  T  S  F  K  S  S  V  P  F   </second_frame>
            <third_frame>   V  V  P  S  L  P  L  T  P  T  P  S  L  H  S  H  I  P  I  T  N  H  E  L  L  L  Q  H  L  H  L  T  L  T  S  S  L  S  R  K  K  I  Q  K  I  *  *  R  N  N  K  D  L  F  F  F  F  H  L   : V  A  W  I  E  D  Y  N  I  L  H  W  T  N  Q  H  A  V  G  I  F  F  S  E  L  L  C  E  V  C  A  L  C  G  I  L  S  C  D  S  V  T  H  F  T  * :   L  R  N  H  F  I  F  C  L  V  I  F  L  D  T  S  L  F  G  G  *  E  C  T  L  R  L  P  *  R  D  T  E  Q  L  K  K  L  V  R  L  K  C  M  W  G  V  L  L  I  T  N  *  C  *  F  V  R :   L  S  T  S  V  S  C  L  N  L  *  R  S  L  L  K  C  K  L  W  G  G  W  D  C  L  L  L  V  A  L  I  Q  Q  S  L  V  E  V  G  I  C  C  F  S  F  S  V  Y  E  I  R  M  T  S  L  S  T  E  C  G  Y  C  *  L  E  L  S  V  L  F  T  T  T  N  T  P  *  T  L  L  S  F  A  C  A  F  R  N  S  *  L  L  *  F  L  K  H  P  K  W  K  T  L  F  *  S  S  L  L  D  L  *  L  S  Y  S  C  R  I  T  I  N  F  P  L  K  F  K  S  L  L  S  L  W  K  T  K  Q  L  V  V  I  Y  L  I  F  L  F  H  P  S  L  I  Q  W  H  F  L  L  V  S  N  L  L  C  P  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="140500" stop="140583"/>
                    <exon start="141185" stop="141307"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSPLPSLEKKFRKSSEETTKIFFFFFIWWLGLKTIIYCTGPINMPWAFSSLSYCVKCVRFVVFFRVIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="141168" e_stop="141320"/>
            <exon e_start="141731" e_stop="143963"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.802" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="141168" e_stop="141320" e_length="153"/>
          </exon>
          <intron i_serial="1" don_prob="0.802" acc_prob="0.941">
            <gDNA_intron_boundary i_start="141321" i_stop="141730" i_length="410"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="141731" e_stop="143963" e_length="2233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141168" stop="141320"/>
              <exon start="141731" stop="143963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG : ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCGGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAATGTGAGGAATATGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACACTTTATGC</gDNA_template>
            <first_frame> F  C  Y  S  R  S  G  L  D  *  R  L  *  Y  T  A  L  D  Q  S  T  C  R  G  H  F  L  L  *  V  I  V  *  S  V  C  A  L  W  Y  S  F  V  *  F  C  N  P  F  Y  L  :  I  A  E  S  L  Y  F  L  S  C  D  I  S  *  Y  *  S  I  W  R  L  R  M  Y  I  A  I  T  L  K  R  Y  R  A  V  K  E  A  G  E  I  K  M  H  V  G  S  V  A  Y  Y  Q  L  M  L  V  C  Q  V  N  I  L  L  A  F  G  P  V  F  L  I  K  L  H  *  I  Q  P  N  S  Y  S  L  K  E  I  E  T  N  Q  L  E  L  N  *  I  L  Y  G  R  I  L  F  C  V  S  V  F  C  L  C  S  D  W  Y  F  V  P  G  A  *  S  S  T  D  S  L  I  K  T  W  L  K  P  L  *  K  C  *  T  L  F  L  F  L  S  I  L  T  L  S  L  R  L  S  T  E  N  C  L  S  S  V  *  C  T  A  I  *  F  P  *  A  S  *  Y  P  Y  R  *  P  R  L  Y  *  N  I  T  F  V  C  L  L  Y  N  A  H  L  T  K  C  M  V  V  P  F  N  L  K  T  M  R  I  V  G  I  I  F  *  A  Y  C  F  L  V  L  I  F  F  L  S  C  I  C  S  E  C  M  T  T  Q  *  Y  G  S  L  V  L  A  F  Y  R  L  S  T  S  V  S  C  L  N  L  *  R  S  L  L  K  C  K  L  W  G  G  W  D  C  L  L  L  V  A  L  I  Q  Q  S  L  V  E  V  G  I  C  C  F  S  F  S  V  Y  E  I  R  M  T  S  L  S  T  E  C  G  Y  C  *  L  E  L  S  V  L  F  T  T  T  N  T  P  *  T  L  L  S  F  A  C  A  F  R  N  S  *  L  L  *  F  L  K  H  P  K  W  K  T  L  F  *  S  S  L  L  D  L  *  L  S  Y  S  C  R  I  T  I  N  F  P  L  K  F  K  S  L  L  S  L  W  K  T  K  Q  L  V  V  I  Y  L  I  F  L  F  H  P  S  L  I  Q  W  H  F  L  L  V  S  N  L  L  C  P  F  M  V  L  N  F  G  P  L  R  H  V  Q  R  I  S  S  S  L  I  R  L  I  T  G  A  R  S  C  T  T  L  P  *  P  P  N  S  H  I  L  I  *  I  I  I  Q  L  A  S  T  T  A  W  R  E  K  L  Q  T  M  R  I  Q  K  F  L  H  I  *  R  K  I  Q  M  I  *  M  H  C  S  A  W  K  R  K  N  V  R  N  M  M  K  K  R  *  A  L  H  A  L  M  Q  T  M  D  A  V  P  L  N  H  T  Q  T  I  I  V  N  P  K  R  A  G  P  L  L  S  G  N  P  L  V  A  V  L  A  I  A  V  R  E  N  A  G  N  L  R  R  W  S  R  H  *  R  E  S  S  L  V  P  A  G  *  I  L  S  P  F  L  M  K  L  S  D  T  S  S  H  L  R  W  K  C  R  S  L  E  S  I  I  *  R  H  M  P  D  I  L  C  G  I  G  N  F  A  S  F  I  T  V  T  *  L  *  T  L  V  I  S  F  A  Y  V  K  K  N  Y  L  Y  R  R  I  A  E  L  L  L  W  R  G  *  R  N  V  E  Y  G  P  L  S  S  D  R  T  I  S  L  L  *  *  L  A  A  I  S  N  F  S  F  *  H  I  V  C  F  H  *  L  Q  T  L  L  R  H  L  N  N  F  S  N  M  *  H  S  F  T  Y  W  S  C  Y  L  L  L  L  L  Y  D  F  D  D  L  F  *  W  I  M  G  *  *  L  H  F  M  </first_frame>
            <second_frame>  F  A  I  L  A  V  A  W  I  E  D  Y  N  I  L  H  W  T  N  Q  H  A  V  G  I  F  F  S  E  L  L  C  E  V  C  A  L  C  G  I  L  S  C  D  S  V  T  H  F  T  * :   L  R  N  H  F  I  F  C  L  V  I  F  L  D  T  S  L  F  G  G  *  E  C  T  L  R  L  P  *  R  D  T  E  Q  L  K  K  L  V  R  L  K  C  M  W  G  V  L  L  I  T  N  *  C  *  F  V  R  *  I  F  F  *  L  L  V  L  S  F  *  L  N  C  T  E  S  N  Q  T  R  T  V  *  R  K  *  R  Q  I  N  *  N  L  I  E  Y  C  M  G  G  F  F  F  V  F  Q  S  S  V  Y  V  L  T  G  I  L  C  Q  V  H  D  L  L  L  T  V  L  L  R  L  G  L  N  H  Y  E  N  V  E  H  Y  S  S  F  Y  Q  Y  *  L  Y  H  *  G  *  V  Q  K  I  V  Y  P  Q  C  S  V  L  L  Y  S  F  H  R  H  L  D  I  H  T  D  N  R  V  C  I  E  I  *  L  L  Y  A  F  C  I  M  L  I  L  P  S  V  W  W  F  R  S  T  S  R  Q  *  E  *  L  G  L  F  S  R  H  I  V  S  L  F  *  Y  F  S  Y  L  A  F  V  L  N  V  *  Q  P  N  D  M  V  L  W  F  L  L  F  T  G  *  V  L  P  S  V  A  *  T  C  N  V  V  C  *  S  V  S  F  G  E  V  G  I  A  Y  F  L  L  L  L  F  S  K  A  L  L  K  L  G  F  V  A  S  L  S  V  Y  T  K  S  E  *  P  H  *  A  L  N  V  V  T  V  D  W  N  C  Q  C  F  L  L  Q  L  I  H  L  E  H  Y  S  L  L  P  V  P  F  V  T  L  S  Y  F  N  F  *  N  I  P  S  G  K  H  F  S  S  P  V  Y  W  I  F  D  L  V  T  H  A  E  *  L  S  I  F  P  S  N  S  K  A  F  C  L  S  G  R  P  S  S  W  W  *  Y  I  *  Y  S  C  S  I  R  L  *  Y  N  G  T  S  Y  *  F  Q  I  F  C  A  L  S  W  F  *  I  S  V  L  *  G  M  S  K  E  F  H  H  L  *  S  D  *  L  P  E  P  D  H  V  P  P  C  H  D  L  Q  I  P  I  S  *  S  E  L  *  F  N  L  L  P  R  L  H  G  E  K  N  C  K  Q  *  E  Y  R  S  F  F  I  S  E  G  R  F  R  *  Y  K  C  I  A  Q  L  G  R  G  R  M  *  G  I  *  *  R  R  G  E  H  C  T  H  *  C  K  L  W  M  Q  F  P  *  I  I  L  K  L  S  L  S  I  Q  K  E  Q  D  L  F  F  Q  G  I  L  W  *  Q  Y  *  Q  L  Q  *  E  K  T  Q  E  T  *  E  D  G  Q  G  I  K  G  N  R  P  W  C  Q  Q  D  E  Y  C  H  R  S  *  *  S  C  Q  I  P  Q  V  T  *  G  G  S  A  E  A  W  S  R  *  S  E  D  I  C  L  I  S  F  V  V  *  V  I  S  L  P  L  S  P  S  H  D  Y  E  P  *  S  Y  L  L  L  M  *  R  R  T  T  Y  T  V  V  L  L  S  C  C  S  G  G  G  N  V  T  *  N  M  V  L  C  P  A  I  G  Q  *  V  C  C  S  S  *  L  L  Y  L  I  S  H  S  S  I  *  Y  V  S  T  S  C  K  L  Y  *  G  I  *  I  I  S  P  I  C  D  T  L  S  P  I  G  A  A  I  C  Y  C  C  C  M  T  L  M  I  C  F  N  G  *  W  V  D  D  Y  T  L  C </second_frame>
            <third_frame>   L  L  F  S  Q  W  L  G  L  K  T  I  I  Y  C  T  G  P  I  N  M  P  W  A  F  S  S  L  S  Y  C  V  K  C  V  R  F  V  V  F  F  R  V  I  L  *  P  I  L  L   : D  C  G  I  T  L  F  S  V  L  *  Y  F  L  I  L  V  Y  L  E  V  E  N  V  H  C  D  Y  L  E  E  I  Q  S  S  *  R  S  W  *  D  *  N  A  C  G  E  C  C  L  L  P  I  D  A  S  L  S  G  K  Y  S  F  S  F  W  S  C  L  F  D  *  I  A  L  N  P  T  K  L  V  Q  S  K  G  N  R  D  K  S  T  R  T  *  L  N  I  V  W  E  D  S  F  L  C  F  S  L  L  F  M  F  *  L  V  F  C  A  R  C  M  I  F  Y  *  Q  S  Y  *  D  L  A  *  T  T  M  K  M  L  N  T  I  P  L  S  I  N  I  D  F  I  T  E  V  E  Y  R  K  L  F  I  L  S  V  V  Y  C  Y  I  V  S  I  G  I  L  I  S  I  Q  I  T  A  S  V  L  K  Y  N  F  C  M  P  S  V  *  C  S  S  Y  Q  V  Y  G  G  S  V  Q  P  Q  D  N  E  N  S  W  D  Y  F  L  G  I  L  F  P  C  F  N  I  F  L  I  L  H  L  F  *  M  Y  D  N  P  M  I  W  F  F  G  S  C  F  L  Q  A  E  Y  F  R  Q  L  L  K  P  V  T  *  S  A  K  V  *  A  L  G  R  L  G  L  L  T  S  C  C  S  Y  S  A  K  P  C  *  S  W  D  L  L  L  L  F  Q  C  I  R  N  Q  N  D  L  I  K  H  *  M  W  L  L  L  I  G  I  V  S  A  F  Y  Y  N  *  Y  T  L  N  I  T  L  F  C  L  C  L  S  *  L  L  A  T  L  I  F  K  T  S  Q  V  E  N  T  F  L  V  Q  F  I  G  S  L  T  *  L  L  M  Q  N  N  Y  Q  F  S  P  Q  I  Q  K  P  F  V  S  L  E  D  Q  A  A  G  G  N  I  F  D  I  P  V  P  S  V  F  D  T  M  A  L  P  T  S  F  K  S  S  V  P  F  H  G  F  E  F  R  S  S  E  A  C  P  K  N  F  I  I  F  D  Q  T  D  Y  R  S  Q  I  M  Y  H  P  A  M  T  S  K  F  P  Y  P  D  L  N  Y  N  S  T  C  F  H  D  C  M  E  R  K  I  A  N  N  E  N  T  E  V  S  S  Y  L  K  E  D  S  D  D  I  N  A  L  L  S  L  E  E  E  E  C  E  E  Y  D  E  E  E  V  S  T  A  R  T  D  A  N  Y  G  C  S  S  P  E  S  Y  S  N  Y  H  C  Q  S  K  K  S  R  T  S  S  F  R  E  S  S  G  S  S  T  S  N  C  S  E  R  K  R  R  K  L  K  K  M  V  K  A  L  K  G  I  V  P  G  A  S  R  M  N  T  V  T  V  L  D  E  A  V  R  Y  L  K  S  L  K  V  E  V  Q  K  L  G  V  D  N  L  K  T  Y  A  *  Y  P  L  W  Y  R  *  F  R  F  L  Y  H  R  H  M  I  M  N  P  S  H  I  F  C  L  C  E  E  E  L  L  I  P  S  Y  C  *  V  A  A  L  E  G  V  T  *  R  R  I  W  S  F  V  Q  R  *  D  N  K  S  A  V  V  A  S  C  Y  I  *  F  L  I  L  A  Y  S  M  F  P  L  V  A  N  S  I  K  A  F  E  *  F  L  Q  Y  V  T  L  F  H  L  L  E  L  L  F  V  I  V  V  V  *  L  *  *  F  V  L  M  D  N  G  L  M  I  T  L  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0122F06.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="142831" stop="143577"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLMQNNYQFSPQIQKPFVSLEDQAAGGNIFDIPVPSVFDTMALPTSFKSSVPFHGFEFRSSEACPKNFIIFDQTDYRSQIMYHPAMTSKFPYPDLNYNSTCFHDCMERKIANNENTEVSSYLKEDSDDINALLSLEEEECEEYDEEEVSTARTDANYGCSSPESYSNYHCQSKKSRTSSFRESSGSSTSNCSERKRRKLKKMVKALKGIVPGASRMNTVTVLDEAVRYLKSLKVEVQKLGVDNLKTYA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 54 chains have been computed
$ 
$ memory statistics:
$ 62400 bytes spliced alignments in total
$ 28 spliced alignments have been stored
$ 2228 bytes was the average size of a spliced alignment
$ 29640 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1560 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 64 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:16:33
-->
