<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:03:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563736" ref_strand="+" ref_description="SGN-U563736 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157338364|emb|CAO39408.1| (e_value=9e-28) unnamed; (*ATH) AT5G45830.1 (e_value=2e-28) | Symbol: None | expressed protein, low similarity to tumor-related protein (Nicotiana glauca x Nicotiana langsdorffii) GI:688423 | chr5:18606709-18608627 REVERSE | Aliases: K15I22.3, K15I22_3; ">
      <seq>gcatggttttatattgagggtgcactaactttaaccagaaaaattcacccatacatgtttttttttccttcccatttattatcataaaaaaaaataattaaaaagaagtagattgattactactgtttatgctgctgatccctcttctctccccattgtggcacacaaaacctcattttcttagctgctgttaagtactccaccgcttgaaccggttcaagtaggttcactattgccttcaacgttttcatcctcagtcgatcaccttcttcaataacatccgccatgtgtctactatgttcatccaaagcttcatccgctttctcacaaccatgtccctcttttttcatcttccccacaagccgttgatccgctatgtcctcttgtaaactagcaaatttattcgaaatcctcctctcttctgcaatcgtcttgctttgcaaatcgttaaccatgctcaactgtttcccacttagttcgcggagcttcctgcttacgatcccctcaagacacggatcagtttcgttggcgtcaggttcaaattcggtgagggcataatgagtcgaatgaaagaagaaggtctacagccagcgatccataggaccgaactctccgaggaagagcacgaggcgggggcgaagaatggggacacgtcttttcgggctagatggagacgcttctcagagtgctcttggaagtgttttatgattttttctatcagttgtctcagtttttcttcatctttttcattgttattgacatgacctacagcatgttcaagttccgtcagttcttcgtgttgaagactcttccaagcacactctgcgtattcttcttccttgcgatcactgctgtttgaatcagttgccattaattttttcttattagttttttcaatatatgataatttattaacaagtatgtttgtctgctgcctcaaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="2380" stop="842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2081" g_stop="1138" g_length="944"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="944" r_length="944" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U563736" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>944</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2081" e_stop="1138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGGCTTTATATTGAGGGTGCACTAACTTTAACCAGAAAAATTCACCCATACATGTTTTTTTTTTCCTTCCCATTTATTATCATAAAAAAAAATAATTAAAAAGAAGTAGATTGATTACTACTGTTTATGCTGCTGATCCCTCTTCTCTCCCCATTGTTGCACACAAAACCTCATTTTCTTAGCTGCTGTTAAGTACTCCACCGCTTGAACCGGTTCAAGTAGGTTCACTATTGCCTTCAACGTTTTCATCCTCAGTCGATCACCTTCTTCAATAACATCCGCCATGTGTCTACTATGTTCATCCAAAGCTTCATCCGCTTTCTCACAACCATGTCCCTCTTTTTTCATCTTCCCCACAAGCCGTTGATCCGCTATGTCCTCTTGTAAACTAGCAAATTTATTCGAAATCCTCCTCTCTTCTGCAATCGTCTTGCTTTGCAAATCGTTAACCATGCTCAACTGTTTCCCACTTAGTTCGCGGAGCTTCCTGCTTACGATCCCCTCAAGACACGGATCAGTTTCGTTGGCGTCAGGTTCAAATTCGGTGAGGGCATAATGAGTCGAATGAAAGAAGAAGGTCTACAGCCAGCGATCCATAGGACCGAACTCTCCGAGGAAGAGCACGAGGCGGGGGCGAAGAATGGGGACACGTCTTTTCGGGCTAGATGGAGACGCTTCTCAGAGTGCTCTTGGAAGTGTTTTATGATTTTTTCTATCAGTTGTCTCAGTTTTTCTTCATCTTTTTCATTGTTATTGACATGACCTACAGCATGTTCAAGTTCCGTCAGTTCTTCGTGTTGAAGACTCTTCCAAGCACACTCTGCGTATTCTTCTTCCTTGCGATCACTGCTGTTTGAATCAGTTGCCATTAATTTTTTCTTATTAGTTTTTTCAATATATGATAATTTATTAACAAGTATGTTTGTCTGCTGCTTC-AGTGT</genome_strand>
        <mrna_strand>GCATGGTTTTATATTGAGGGTGCACTAACTTTAACCAGAAAAATTCACCCATACATG-TTTTTTTTTCCTTCCCATTTATTATCATAAAAAAAAATAATTAAAAAGAAGTAGATTGATTACTACTGTTTATGCTGCTGATCCCTCTTCTCTCCCCATTGTGGCACACAAAACCTCATTTTCTTAGCTGCTGTTAAGTACTCCACCGCTTGAACCGGTTCAAGTAGGTTCACTATTGCCTTCAACGTTTTCATCCTCAGTCGATCACCTTCTTCAATAACATCCGCCATGTGTCTACTATGTTCATCCAAAGCTTCATCCGCTTTCTCACAACCATGTCCCTCTTTTTTCATCTTCCCCACAAGCCGTTGATCCGCTATGTCCTCTTGTAAACTAGCAAATTTATTCGAAATCCTCCTCTCTTCTGCAATCGTCTTGCTTTGCAAATCGTTAACCATGCTCAACTGTTTCCCACTTAGTTCGCGGAGCTTCCTGCTTACGATCCCCTCAAGACACGGATCAGTTTCGTTGGCGTCAGGTTCAAATTCGGTGAGGGCATAATGAGTCGAATGAAAGAAGAAGGTCTACAGCCAGCGATCCATAGGACCGAACTCTCCGAGGAAGAGCACGAGGCGGGGGCGAAGAATGGGGACACGTCTTTTCGGGCTAGATGGAGACGCTTCTCAGAGTGCTCTTGGAAGTGTTTTATGATTTTTTCTATCAGTTGTCTCAGTTTTTCTTCATCTTTTTCATTGTTATTGACATGACCTACAGCATGTTCAAGTTCCGTCAGTTCTTCGTGTTGAAGACTCTTCCAAGCACACTCTGCGTATTCTTCTTCCTTGCGATCACTGCTGTTTGAATCAGTTGCCATTAATTTTTTCTTATTAGTTTTTTCAATATATGATAATTTATTAACAAGTATGTTTGTCTGCTGCCTCAAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584790" ref_strand="+" ref_description="SGN-U584790 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157354724|emb|CAO48042.1| (e_value=3e-79) unnamed; (*ATH) AT5G45820.1 (e_value=9e-76) | Symbol: None | CBL-interacting protein kinase 20 (CIPK20), identical to CBL-interacting protein kinase 20 (Arabidopsis thaliana) gi:14486384:gb:AAK61493 | chr5:18604308-18605627 REVERSE | Aliases: K15I22.2, K15I22_2; (*SWP) sp|Q5W736|CIPKI_ORYSJ (e_value=1e-77) CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18; ">
      <seq>tattgccataagtttgctccatactaattgagactactttctcctataggcatttcctctaaccctgccacaaataaggcaaggtttttgcccttctttttcccttgtaatttcatcaatattccaaatctttcaacaaaacaaaaagggctccttaatctccatgcaataacaactacgcctctgttccaaacagattacgattacaatggcaatgaatcctcaacaaaattaaaaagaaaaaataatttgtctcaattgtattgccaatttcttcttcaggatgacttcgaagaacgataagaaaggcaatattttgatgcaaaggtatgagattgggaaattgcttgggcagggtacatttgcaaaagtataccatgctagaaatctcaaaacagggcaaagtgttgctattaaggtgattgacaaagagaagattatgaaggttgggttaattgatcaaacgaaacgtgaaatctccgtcatgaggctaatcaaacacccaaatattgtccagctctatgaggttatggcgagcaaaacaaaaatatattttgctatggaatatgttagaggtggtgaacttttcaataaggttgctaaaggcagacttaaagaagatgctgcaagaaaatactttcaacagttaatcgctgcagtcgatttctgtcatagccgtgatgtctaccaccgtgatctcaagcctgaaaatctcctccttgacgaaggtggcaatctgaaagtctcggattttggtctgagtgcattgtttgattcgaaaaggcaagatggtctactccacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="3206" stop="4684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3506" g_stop="4233" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4234" i_stop="4308" i_length="75">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4309" g_stop="4384" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="804" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U584790" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3506" e_stop="4233"/>
          <exon e_start="4309" e_stop="4384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGCCATAAGTTTGCTCCATACTAATTGAGACTACTTTCTCCTATAGGCATTTCCTCTAACCCTGCCACAAATAAGGCAAGGTTTTTGCCCTTCTTTTTCCCTTGTAATTTCATCAATATTCCAAATCTTTCAACAAAACAAAAAGGGCTCCTTAATCTCCATGCAATAACAACTACGCCTCTGTTCCAAACAGATTACGATTACAATGGCAATGAATCCTCAACAAAATTAAAAAGAAAAAATAATTTGTCTCAATTGTATTGCCAATTTCTTCTTCAGGATGACTTCGAAGAACGATAAGAAAGGCAATATTTTGATGCAAAGGTATGAGATTGGGAAATTGCTTGGGCAGGGTACATTTGCAAAAGTATACCATGCTAGAAATCTCAAAACAGGGCAAAGTGTTGCTATTAAGGTGATTGACAAAGAGAAGATTATGAAGGTTGGGTTAATTGATCAAACGAAACGTGAAATCTCCGTCATGAGGCTAATCAAACACCCAAATATTGTCCAGCTCTATGAGGTTATGGCGAGCAAAACAAAAATATATTTTGCTATGGAATATGTTAGAGGTGGTGAACTTTTCAATAAGGTTGCTAAAGGCAGACTTAAAGAAGATGCTGCAAGAAAATACTTTCAACAGTTAATCGCTGCAGTCGATTTCTGTCATAGCCGTGATGTCTACCACCGTGATCTCAAGCCTGAAAATCTCCTCCTTGACGAAGGTAGTGTTCAAATTTTATACAAGAGTCGCGAGAGGAGTGCATTTTTATTTACTTAATCATGTTTTCGTGCAACAGGTGGCAATCTGAAAGTCTCGGATTTTGGTCTGAGTGCATTGTTTGATTCGAAAAGGCAAGATGGTCTACTCCACAC</genome_strand>
        <mrna_strand>TATTGCCATAAGTTTGCTCCATACTAATTGAGACTACTTTCTCCTATAGGCATTTCCTCTAACCCTGCCACAAATAAGGCAAGGTTTTTGCCCTTCTTTTTCCCTTGTAATTTCATCAATATTCCAAATCTTTCAACAAAACAAAAAGGGCTCCTTAATCTCCATGCAATAACAACTACGCCTCTGTTCCAAACAGATTACGATTACAATGGCAATGAATCCTCAACAAAATTAAAAAGAAAAAATAATTTGTCTCAATTGTATTGCCAATTTCTTCTTCAGGATGACTTCGAAGAACGATAAGAAAGGCAATATTTTGATGCAAAGGTATGAGATTGGGAAATTGCTTGGGCAGGGTACATTTGCAAAAGTATACCATGCTAGAAATCTCAAAACAGGGCAAAGTGTTGCTATTAAGGTGATTGACAAAGAGAAGATTATGAAGGTTGGGTTAATTGATCAAACGAAACGTGAAATCTCCGTCATGAGGCTAATCAAACACCCAAATATTGTCCAGCTCTATGAGGTTATGGCGAGCAAAACAAAAATATATTTTGCTATGGAATATGTTAGAGGTGGTGAACTTTTCAATAAGGTTGCTAAAGGCAGACTTAAAGAAGATGCTGCAAGAAAATACTTTCAACAGTTAATCGCTGCAGTCGATTTCTGTCATAGCCGTGATGTCTACCACCGTGATCTCAAGCCTGAAAATCTCCTCCTTGACGAAG...........................................................................GTGGCAATCTGAAAGTCTCGGATTTTGGTCTGAGTGCATTGTTTGATTCGAAAAGGCAAGATGGTCTACTCCACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565126" ref_strand="+" ref_description="SGN-U565126 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|84873488|gb|ABC67804.1| (e_value=3e-70) protein; (*ATH) AT4G18700.1 (e_value=3e-55)  Symbol: None | CBL-interacting protein kinase 12 (CIPK12), identical to CBL-interacting protein kinase 12 (Arabidopsis thaliana) gi:13249123:gb:AAK16687; contains Pfam profiles PF00069: Protein kinase domain and PF03822: NAF domain; identical to cDN... ; (*SWP) sp|Q9SN43|CIPKC_ARATH (e_value=3e-54) CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12; ">
      <seq>aagaaagggttttaaacatgttaaattttatattgaggatgataagttgtgtagtataaatgatgatgagtatggtggattgnattattcgtctgatagatcagagtctgagtctgaaatagagatcagaaggaggtcagctagtttacctaggccagctagcttgaatgcatttgatattatttcattttcccgtggctttgatttgtccggtttgtttgaggagggaggagatggggcaaggtttgtatctggggctcctgtgcccaagatcataaataagttggaggaaattgctaaagttgtgagctttgcagtaaggaagaaggattgtaaagtgagtatggaggggtctaaggaaggtgcaaaggggccgttgacagttgcagctgagatatttgagttgacaccatcgttgagagttgttgaagtgaagaagaaaggaggagatagcttggagtatgaggagttttacaacagggaattgaagccaggattacagaatttagcacatgaagttggataccctgttaattcatcgtatttgccatcagatactgaataaagagagagaaggggaaagggtaactgcggacatcttagggaccagttggaggcttcttgcactcaaacggagatctcctgaataccaaaaagaaggaacacatgccaagctagactgatggagcttcatgctagtgaaccttgacatgagttgatgttcgtaatcaagatttcaccacttcaattctagccagcgaggaacatggttcgtagtctaattgtatattagtagccccgtcaacaaggcccctccagtgcgggttagttgatgtagtagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="15108" stop="11322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14808" g_stop="14226" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14225" i_stop="11880" i_length="2346">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11879" g_stop="11622" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="842" r_length="258" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U565126" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14808" e_stop="14226"/>
          <exon e_start="11879" e_stop="11622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAG-AAGGGTTTTAAACATGTTAAATTTTATATTGAGGATGATAAGTTGTGTAGTATAAATGATGATGAGTATGGTGGGATTGATTATTCGTCTGATAGATCAGAGTCTGAGTCTGAAATAGAGATCAGAAGGAGGTCAGCTAGTTTACCTAGGCCAGCTAGCTTGAATGCATTTGATATTATTTCATTTTCCCGTGGCTTTGATTTGTCCGGTTTGTTTGAGGAGGGAGGAGATGGGGCAAGGTTTGTATCTGGGGCTCCTGTGCCCAAGATCATAAATAAGTTGGAGGAAATTGCTAAAGTTGTGAGCTTTGCAGTAAGGAAGAAGGATTGTAAAGTGAGTATGGAGGGGTCTAAGGAAGGTGCAAAGGGGCCGTTGACAGTTGCAGCTGAGATATTTGAGTTGACACCATCGTTGAGAGTTGTTGAAGTGAAGAAGAAAGGAGGAGATAGCTTGGAGTATGAGGAGTTTTACAACAGGGAATTGAAGCCAGGATTACAGAATTTAGCACATGAAGTTGGATACCCTGTTAATTCATCGTATTTGCCATCAGATACTGAATAAAGAGAGAGAAGGGGAAAGGGTAAGCTCTTTTCTCCTCCCTTTTTATATCGTAGGTGCATTTGAATAGGTAGCACTTTGTGTTCTTTGCACTTTTGCATCTGTTATTAGCTCATGTTCAAAGCTTGTCAGATCTTGTAATTTCGGTTCTTGTTATGGGATGTTATATAAAATTATCTAAAAAATGAACACATCAGTGTCTCGAAATCGGCTCGTTTCTCAATTTTCTTTTATTTTCTGTTTCTAGTAATATTCTAACTCTTAACCAAAAAATTGTGGCACGCTATTCCTATGAGCAAATGCTTGGCTGTAGTAGTCTGCAGCTTGTGGAAGTGCAATGTTATAGATTGAGCTTCTCAACTTCTCTGTAGGAACCACTGCATTACAAATTGAGCTTCTCAATCTTGTAAGGCCAGTTAATAAGGAGCAATTCTGCTAATAACATCTGCACAATAATTTTTTATTAACTACTCATGGAGTTGAGCCACGGTAAGTTTTGTGATGCTTGCATTAGGATAAGGCATAAGCTGCTTGCATTGTGGCCCTTCCTCAAACTTTATGTGAATGCAGGATGCTTTGTGCACTGGGCCGTTCTCAAAGGTTGTCCGATCCTTCCCCCCAGCACATATGGTCTTCACAATATAATGAGAAAATAAAGAGAGTTTAAATTTTTCTTTTCTTGTTTGGTTGTCGTGTCTGGATTGGTCTGATAGAAATGTGAATCATTCATGAACTGTAATCTGCTTTTTCATTGCCAAGTTGATCAAAGCCAGTAGAACCTTGATGATTGGAACTTGGATCAAGGCTCTTGTAGATTTTCTTGAGGATGTTACCTGCCAAGCTTAATCTGACAAACCTTACTGAATGATTTATGCTTGTCATTAACTGTTCTCTTATTTTGCCTGCTAGTTTTATTGGTCAATCTGTATTTTCACTTTGAGTTTGTTATTTGCATAAGTAGATCTTCTTCAATGAAAAAGGTAAAAGAAGAACCTTTTTTTCTATCGTTACAGAAGTACAAACTAGCTTGGCAATTAAATGGCTGTCTTTAACTTTGACGGGTTTAGGTACGTCTGAGGACAGGGGGCAACTAAGGGGAAAACATTTAAGTGAGGTTTGTTCAGATAGGTTTTATTTGTGTGAATGTTTTTGGTCATGGTAAAGACGATTGTTGTAGATTTATGAAAACCAGCTCTCTGATTACCCTTGGTCGGTGATGAAATTGGTATATGGTGCTTAAATATATTCCTCGATCTTTTTCATACATTGCAGCCTAGATTTTTTTACTTAGACATGAAGCGAAAGTTTTGCTTCTTTTAATATTTCACGTCGCCTTTTGCTTTTCCCCAATAGATGGGAAATGCTGAATGATGTCGGAGCAACATAGCTGAAAGCGAATAAACTCATAGGAGTATGCTTTCAATTTGACTAGCATGTTCCAACTTTTTGAGGCACCTTCTGGGTGATATGGTAATAAAAATTCATTTTACCTTAAAAAGAAAAAAAAAGTGGTTTTTGATGATCTCTCATTAGTGATAGTTCTACTGTTTCACCGATAGGGGATTGATTATATTTTGATGGGAATATGATGCAAGATCCTGGATCTAAGGGCATATCTTTGTCACTTCTTATGTTCGCTTCTTGCATATGCTGCATTCTGTTATGCTGTGTCATAGTGGTCTTCTGTTCCTTATTATTGTTAAAAATGAGCACCCTGATGGCTGTTTCAATGTTAGTGAAGGGCTTGTCCTTATTCGTTCTTTCCTTTTTTATATTCTTTTCTTGATACTACCATTTGAACATTGTTGACCAACCTTTCTCATATAAACTAATATTTTCTTCTTATTATGGCCAGTTCATTCATCACTATGATGCTGGTGTGATTAATTAAATATTTAGTATCACTATGATGCTGGTGTGATTAATTAAAAATTTAGTAGTGGTTGGTACTGAAAGGAGTAATTGCTCAATTTGTATTCTGCAACTGATTGCCTGAATTTGGTCACTTATGGATTCTTTATATAATCAGTAATTGACCTATTACCAATCAACTGATGACTCATCTATTTATGTACTACTTTGAATAAACACTTCCGCTTTGACGGTCTAATGTTTATGTTCTGCCTTAGTTAGCACACATTGGTTCCTAATTGCTAGACCTCTCTTTTATGTTTTTGTTTGATCTCTCTTTATGTTCTTTCGCGCCTTCACTTGTTGCTAGATCTGTGTGATTGCATTGGCCAACAGGTTATGATTTGGTATCGTATAATGGGATGCCAAATAAAACTAGTCTGGCATTCCCACTCTTCATTAATTATTCAGAAAATGCAGTTCAACAATACTTTTCTGTTTGTTCCCTGTCTGTTAGGTAACTGCGGACATCTTAGGGACCAGTTGGAGGCTTCTTGCACTCAAACGGAGATCTCCTGAATACCAAAAAGAAGGAACACATGCCAAGCTAGACTGATGGAGCTTCATGCTAGTGAACCTTGACATGAGTTGATGTTCGTAATCAAGATTTCACCACTTCAATTCTAGCCAGCGAGGAACATGGTTCGTAGTCTAATTGTATATTAGTAGCCCCGTCAACAAGGCCCCTCCAGTGCGGGTTAGTTGATGTAGTAGT</genome_strand>
        <mrna_strand>AAGAAAGGGTTTTAAACATGTTAAATTTTATATTGAGGATGATAAGTTGTGTAGTATAAATGATGATGAGTATGGTGGATTGNATTATTCGTCTGATAGATCAGAGTCTGAGTCTGAAATAGAGATCAGAAGGAGGTCAGCTAGTTTACCTAGGCCAGCTAGCTTGAATGCATTTGATATTATTTCATTTTCCCGTGGCTTTGATTTGTCCGGTTTGTTTGAGGAGGGAGGAGATGGGGCAAGGTTTGTATCTGGGGCTCCTGTGCCCAAGATCATAAATAAGTTGGAGGAAATTGCTAAAGTTGTGAGCTTTGCAGTAAGGAAGAAGGATTGTAAAGTGAGTATGGAGGGGTCTAAGGAAGGTGCAAAGGGGCCGTTGACAGTTGCAGCTGAGATATTTGAGTTGACACCATCGTTGAGAGTTGTTGAAGTGAAGAAGAAAGGAGGAGATAGCTTGGAGTATGAGGAGTTTTACAACAGGGAATTGAAGCCAGGATTACAGAATTTAGCACATGAAGTTGGATACCCTGTTAATTCATCGTATTTGCCATCAGATACTGAATAAAGAGAGAGAAGGGGAAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTGCGGACATCTTAGGGACCAGTTGGAGGCTTCTTGCACTCAAACGGAGATCTCCTGAATACCAAAAAGAAGGAACACATGCCAAGCTAGACTGATGGAGCTTCATGCTAGTGAACCTTGACATGAGTTGATGTTCGTAATCAAGATTTCACCACTTCAATTCTAGCCAGCGAGGAACATGGTTCGTAGTCTAATTGTATATTAGTAGCCCCGTCAACAAGGCCCCTCCAGTGCGGGTTAGTTGATGTAGTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574837" ref_strand="+" ref_description="SGN-U574837 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|147820561|emb|CAN69833.1| (e_value=1e-55) hypothetical; (*ATH) AT5G45800.1 (e_value=9e-49) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18592809-18596324 REVERSE | Aliases: MRA19.24, MRA19_24; (*SWP) sp|Q9LYN8|EXS_ARATH (e_value=5e-12) Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS; ">
      <seq>tgtgaagcaattccacgactcaggttgattgccaatgtatgtttgaaaattctatgctaaaaaccccaaaggaagtttaggttcaacaaaccctctcacagatccacataaatttgtccatctctttctgtttttccaactctattattatttgttcctttttttctctctccatatataaataaaaccaattgtattggtcttatttacctccacttgaattcatctactcttatcaactctatatggcatttacatcaactactatcaactgaaagaaacaatctcaattcccacagaacaaaaaatgaaaatcctcttcacactctttatcttcctttctcttttcacattctcaaaatcagaatccccttgcagaaacaacacagatgttgattcatctcttgttttcaaggctttcagttctgtttatggcttcaacatctcttggttcagctcaaactgttcctctccaataactgaaattaacttatcttcaagaaacctcactggcatagtctcatggaagtacttgaaaaatttgtcccatcttcattctatagatctatcaaataattccttaaagggttctgttcatcctctgttttggtccatttcatctttggttcaagtcaatttgtcaaagaataagcttggtggagctgttgctgtagcaagatcatcatcatctattcaaagacttgatctttctttcaacaggtttactaacttaggctctgttttttatggttttcctaatctcacttctcttgacctttcacataatgatatcaagtttttgcctttttggtttaccaacctaactaagcttgaaaatttgagcatttctagctgtaacatttatggcaatccaaaacccctttcacatatcaagtcactgaagcatttagatgtttctgtcaaccatatggatggtaaattacctaatgattttcctcctctgtctagtctcaatttcttgaatatttcattcaataacttcactggggaaatacctaaagaccagtttgctaaatttgggaattcttctttctttcatgctgggcacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="28349" stop="30020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28649" g_stop="29720" g_length="1072"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1072" r_length="1072" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U574837" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1072</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28649" e_stop="29720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGAAGCAATTCCACGACTCAGGTTGATTGCCAATGTATGTTTGAAAATTCTATGCTAAAAACCCCAAAGGAAGTTTAGGTTCAACAAACCCTCTCACAGATCCACATAAATTTGTCCATCTCTTTCTGTTTTTCCAACTCTATTATTATTTGTTCCTTTTTTTCTCTCTCCATATATAAATAAAACCAATTGTATTGGTCTTATTTACCTCCACTTGAATTCATCTACTCTTATCAACTCTATATGGCATTTACATCAACTACTATCAACTGAAAGAAACAATCTCAATTCCCACAGAACAAAAAATGAAAATCCTCTTCACACTCTTTATCTTCCTTTCTCTTTTCACATTCTCAAAATCAGAATCCCCTTGCAGAAACAACACAGATGTTGATTCATCTCTTGTTTTCAAGGCTTTCAGTTCTGTTTATGGCTTCAACATCTCTTGGTTCAGCTCAAACTGTTCCTCTCCAATAACTGAAATTAACTTATCTTCAAGAAACCTCACTGGCATAGTCTCATGGAAGTACTTGAAAAATTTGTCCCATCTTCATTCTATAGATCTATCAAATAATTCCTTAAAGGGTTCTGTTCATCCTCTGTTTTGGTCCATTTCATCTTTGGTTCAAGTCAATTTGTCAAAGAATAAGCTTGGTGGAGCTGTTGCTGTAGCAAGATCATCATCATCTATTCAAAGACTTGATCTTTCTTTCAACAGGTTTACTAACTTAGGCTCTGTTTTTTATGGTTTTCCTAATCTCACTTCTCTTGACCTTTCACATAATGATATCAAGTTTTTGCCTTTTTGGTTTACCAACCTAACTAAGCTTGAAAATTTGAGCATTTCTAGCTGTAACATTTATGGCAATCCAAAACCCCTTTCACATATCAAGTCACTGAAGCATTTAGATGTTTCTGTCAACCATATGGATGGTAAATTACCTAATGATTTTCCTCCTCTGTCTAGTCTCAATTTCTTGAATATTTCATTCAATAACTTCACTGGGGAAATACCTAAAGACCAGTTTGCTAAATTTGGGAATTCTTCTTTCTTTCATGCTGGGCACTTG</genome_strand>
        <mrna_strand>TGTGAAGCAATTCCACGACTCAGGTTGATTGCCAATGTATGTTTGAAAATTCTATGCTAAAAACCCCAAAGGAAGTTTAGGTTCAACAAACCCTCTCACAGATCCACATAAATTTGTCCATCTCTTTCTGTTTTTCCAACTCTATTATTATTTGTTCCTTTTTTTCTCTCTCCATATATAAATAAAACCAATTGTATTGGTCTTATTTACCTCCACTTGAATTCATCTACTCTTATCAACTCTATATGGCATTTACATCAACTACTATCAACTGAAAGAAACAATCTCAATTCCCACAGAACAAAAAATGAAAATCCTCTTCACACTCTTTATCTTCCTTTCTCTTTTCACATTCTCAAAATCAGAATCCCCTTGCAGAAACAACACAGATGTTGATTCATCTCTTGTTTTCAAGGCTTTCAGTTCTGTTTATGGCTTCAACATCTCTTGGTTCAGCTCAAACTGTTCCTCTCCAATAACTGAAATTAACTTATCTTCAAGAAACCTCACTGGCATAGTCTCATGGAAGTACTTGAAAAATTTGTCCCATCTTCATTCTATAGATCTATCAAATAATTCCTTAAAGGGTTCTGTTCATCCTCTGTTTTGGTCCATTTCATCTTTGGTTCAAGTCAATTTGTCAAAGAATAAGCTTGGTGGAGCTGTTGCTGTAGCAAGATCATCATCATCTATTCAAAGACTTGATCTTTCTTTCAACAGGTTTACTAACTTAGGCTCTGTTTTTTATGGTTTTCCTAATCTCACTTCTCTTGACCTTTCACATAATGATATCAAGTTTTTGCCTTTTTGGTTTACCAACCTAACTAAGCTTGAAAATTTGAGCATTTCTAGCTGTAACATTTATGGCAATCCAAAACCCCTTTCACATATCAAGTCACTGAAGCATTTAGATGTTTCTGTCAACCATATGGATGGTAAATTACCTAATGATTTTCCTCCTCTGTCTAGTCTCAATTTCTTGAATATTTCATTCAATAACTTCACTGGGGAAATACCTAAAGACCAGTTTGCTAAATTTGGGAATTCTTCTTTCTTTCATGCTGGGCACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570821" ref_strand="+" ref_description="SGN-U570821 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157354722|emb|CAO48040.1| (e_value=2e-16) unnamed; (*ATH) AT5G45800.1 (e_value=3e-14) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18592809-18596324 REVERSE | Aliases: MRA19.24, MRA19_24; ">
      <seq>tggaaatggagccgacgcgctcgactcgagactaaaactcggcggtgactcagtgagtgagatggtggagtgcctccgagttgggtacttgtgtacggcggaggccccaaataaacggcctagaatgcaacaagttttgggtttgctaaaagacatacagccgcactaccaactcggaaaaacgcaaaatttatgatcttcaggtaaaccactctcactcccagcgcgtgattcacacgacgaggaagattgattggcagcattgcattattgtactcccatgtgtttgatttgaccattgaaaagtcaaaagtacaatgcatctattccacatcatcaatggcattcagtcacgtgcaggtcacgtgatgaagtgtagtgagaggaacatgttttgcttgtttggctcttttttactctctctttctttttcttttcttttttcggaatttgtatagtatttaattagaaaaagaaaattgaacaaaaatcatgggtaaatctttttttatatataatcttttatttatttatttagattttagggagtgtaatttgaagtggagcagagaaggcagagaatcccactaattgcttgtctctactaagggacattagaatcattcaactcctttagttttcttttcttttaccttctttatttttttctctttaatttaactnttattgtttgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="31211" stop="32508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31511" g_stop="32208" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U570821" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31511" e_stop="32208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAATGGAGCCGACGCGCTCGACTCGAGACTAAAACTCGGCGGTGACTCAGTGAGTGAGATGGTGGAGTGCCTCCGAGTTGGGTACTTGTGTACGGCGGAGGCCCCAAATAAACGGCCTAGAATGCAACAAGTTTTGGGTTTGCTAAAAGACATACAGCCGCACTACCAACTCGGAAAAACGCAAAATTTATGATCTTCAGGTAAACCACTCTCACTCCCAGCGCGTGATTCACACGACGAGGAAGATTGATTGGCAGCATTGCATTATTGTACTCCCATGTGTTTGATTTGACCATTGAAAAGTCAAAAGTACAATGCATCTATTCCACATCATCAATGGCATTCAGTCACGTGCAGGTCACGTGATGAAGTGTAGTGAGAGGAACATGTTTTGCTTGTTTGTCTCTTTTTTACTCTCTCTTTCTTTTTCTTTTCTTTTTTCGTAATTTGTATAGTATTTAATTAGAAAAAGAAAATTGAACAAAAATCATGGGTAAATCTTTTTTTATATATAATCTTTTATTTATTTATTTAGATTTTAGGGAGTGTAATTTGAAGTGGAGCAGAGAAGGCAGAGAATCCCACTAATTGCTTGTCTCTACTAAGGGACATTAGAATCATTCAACTCCTTTAGTTTTCTTTTCTTTTACCTTCTTTATTTTTTTCTCTTTAATTTAAACTTTTATTGTTTGTTT</genome_strand>
        <mrna_strand>TGGAAATGGAGCCGACGCGCTCGACTCGAGACTAAAACTCGGCGGTGACTCAGTGAGTGAGATGGTGGAGTGCCTCCGAGTTGGGTACTTGTGTACGGCGGAGGCCCCAAATAAACGGCCTAGAATGCAACAAGTTTTGGGTTTGCTAAAAGACATACAGCCGCACTACCAACTCGGAAAAACGCAAAATTTATGATCTTCAGGTAAACCACTCTCACTCCCAGCGCGTGATTCACACGACGAGGAAGATTGATTGGCAGCATTGCATTATTGTACTCCCATGTGTTTGATTTGACCATTGAAAAGTCAAAAGTACAATGCATCTATTCCACATCATCAATGGCATTCAGTCACGTGCAGGTCACGTGATGAAGTGTAGTGAGAGGAACATGTTTTGCTTGTTTGGCTCTTTTTTACTCTCTCTTTCTTTTTCTTTTCTTTTTTCGGAATTTGTATAGTATTTAATTAGAAAAAGAAAATTGAACAAAAATCATGGGTAAATCTTTTTTTATATATAATCTTTTATTTATTTATTTAGATTTTAGGGAGTGTAATTTGAAGTGGAGCAGAGAAGGCAGAGAATCCCACTAATTGCTTGTCTCTACTAAGGGACATTAGAATCATTCAACTCCTTTAGTTTTCTTTTCTTTTACCTTCTTTATTTTTTTCTCTTTAATTT-AACTNTTATTGTTTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596517" ref_strand="-" ref_description="SGN-U596517 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacaagttttgggtttgctaaaagacatacagccccagtaccaacttggaaaaacgcaaaatttatgatcttcaggtaacccactctcacccccagcgcgtgatttacacgacgaggaagattgattggcagcattgcattattgtactcccatgtgtttgatttgaccattgaaaagtcaaaagtacaatgcatctattccacatcatcaatggcattcagtcacgtgcaggtcacgtgatgaagtgtagcgagaggaacatgttttgcttgtttgtcttttttttattctctctttcttttctttttctcgtaatttgtatagtatttaattagaaaaagaaaattgaacaaaaattatgggtaaaaaaaaaaaaaaaaaactcgagactagtctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="31339" stop="32249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31639" g_stop="32010" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="368" polyA_stop="384"/>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U596517" ref_strand="-">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596517" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31639" e_stop="32010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGTTTTGGGTTTGCTAAAAGACATACAGCCGCACTACCAACTCGGAAAAACGCAAAATTTATGATCTTCAGGTAAACCACTCTCACTCCCAGCGCGTGATTCACACGACGAGGAAGATTGATTGGCAGCATTGCATTATTGTACTCCCATGTGTTTGATTTGACCATTGAAAAGTCAAAAGTACAATGCATCTATTCCACATCATCAATGGCATTCAGTCACGTGCAGGTCACGTGATGAAGTGTAGTGAGAGGAACATGTTTTGCTTGTTTGTCTCTTTTTTACTCTCTCTTTCTTTTTCTTTTCTTTTTTCGTAATTTGTATAGTATTTAATTAGAAAAAGAAAATTGAACAAAAATCATGGGTAA</genome_strand>
        <mrna_strand>AACAAGTTTTGGGTTTGCTAAAAGACATACAGCCCCAGTACCAACTTGGAAAAACGCAAAATTTATGATCTTCAGGTAACCCACTCTCACCCCCAGCGCGTGATTTACACGACGAGGAAGATTGATTGGCAGCATTGCATTATTGTACTCCCATGTGTTTGATTTGACCATTGAAAAGTCAAAAGTACAATGCATCTATTCCACATCATCAATGGCATTCAGTCACGTGCAGGTCACGTGATGAAGTGTAGCGAGAGGAACATGTTTTGCTTGTTTGTCTTTTTTTTATTCTCTCTTTC-TTTTC---T-TTTTCTCGTAATTTGTATAGTATTTAATTAGAAAAAGAAAATTGAACAAAAATTATGGGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563180" ref_strand="+" ref_description="SGN-U563180 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|147777834|emb|CAN75732.1| (e_value=9e-18) hypothetical; ">
      <seq>gcggacactttctcaacccaattaccccaacagctcacgacggaacccttgaatctccaattttttcaattatcgaaacccctaatatttcaaaacttcgaaatcccaatttcgtagactgaaaacctaattgaatcgtaatggcatcgcagaagaaggaatcggagggaatcgctctactgtctatctatggcgacgacgaagatgaagacatggaagaagttgaagaagaacaaagggaagaagatgcacaagaacacagacctgaatcacataacttaggctttacaatgggcacagagttccaagatgatagcaaaaaagttttcgggtctgattcaggtcggagttcgactccttcacctctaattcaacaacttcagcaacaacagtctgttgaaaatttcacacctagcaaggtttcgaattttggtgttggttctaccactacgacgccattagcgtccgtttcttccccaaatcctcagccaatggagatgaatttgaatgtgaatgtgagtagacgagcaaggctaactattgttgattatgctcatgatgaagttaccatgtcaccggagcctgaggaaggagaagtaatggctagtggaagagtcatgtatggagcggaacttcaaactgctagtgttgaatttatggaaaaggcttcaccagctcttcaagttagaacacctagtgctcaaacccctcctcagtcagctgagccaactgaacaattggatgatactatggactttgctgttaatgaaggacatggagttgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="36496" stop="40191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36795" g_stop="37381" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37382" i_stop="37593" i_length="212">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37594" g_stop="37654" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="648" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37655" i_stop="39752" i_length="2098">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39753" g_stop="39891" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="787" r_length="139" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U563180" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36795" e_stop="37381"/>
          <exon e_start="37594" e_stop="37654"/>
          <exon e_start="39753" e_stop="39891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGACACTTTCTCAACCCAATTACCCCAACAGCTCACGACGGAACCCTTGAATCTCCAATTTTTTCAATTATCGAAACCCCTAATATTTCAAAACTTCGAAATCCCAATTTCGTAGACTGAAAACCTAATTGAATCGTAATGGCATCGCAGAAGAAGGAATCGGAGGGAATCGCTCTACTGTCTATCTATGGCGACGACGAAGATGAAGACATGGAAGAAGTTGAAGAAGAACAAAGGGAAGAAGATGCACAAGAACACAGACCTGAATCACATAACTTAGGCTTTACAATGGGCACAGAGTTCCAAGATGATAGCAAAAAAGTTTTCGGGTCTGATTCAGGTCGGAGTTCGACTCCTTCACCTCTAATTCAACAACTTCAGCAACAACAGTCTGTTGAAAATTTCACACCTAGCAAGGTTTCGAATTTTGGTGTTGGTTCTACCACTACGACGCCATTAGCGTCCGTTTCTTCCCCAAATCCTCAGCCAATGGAGATGAATTTGAATGTGAATGTGAGTAGACGAGCAAGGCTAACTATTGTTGATTATGCTCATGATGAAGTTACCATGTCACCGGAGCCTGAGGTACTTATTTTTATGCTCTATTTTGAGTTGAATTTTGCTTTTTATTTTTTATTTTTTATGCTTGTTCAAAACGGACTGAAAAGAAGATGAGAAAATTAAGGATTTTGGCTTTTAGATTATGCTAGAAAACTCATGTGGGATCCTATTAGAGAGTTATTCATGTAATGAACCTATGATTTAGGAGTTGATGTGAGTTTTTCCTCTCTCTGTAGGAAGGAGAAGTAATGGCTAGTGGAAGAGTCATGTATGGAGCGGAACTTCAAACTGCTAGTGGTATGTATGCTTTATGTTTTCTCTATTCAGCTCCGCCTCGTATGCTGTTTTGTTGTTATGCCCCTTGCTTGACTGCTTAGTTAAATTGACCTAGGAGTTATGCCTGGTATGGTTACATTGTTCAGGATAGGCAACTATTGTAATTCAACCATTTTTTTTCTCATTCCGCCATCTTAATTTTGTATGACTGTCTTTCCTAGGGAGTGGCACCTCTCCATTTACAGAAGCTGTTTCTTTTATAAATGTGGTGCCCACGACAGCTTTTGTGCATCTCGACTAATTTCCCAGGATAGGCGAAAAAGCGAAATGGTGTGATAGGCCCATGGGTTGGATCGTAAATTGGACCCTTCTATTTACGACCTTGTCAAACTGAACACTTAAAACTCAATGAATCACAATATTTTAAACACCTCTGACCATTGACCAAACTTATGTCAGCAATAAATAGCTGAGTTGGAAATGTACAATGTACACGCGGATTAAGGGCGTGAATTGATACTTTTCATTATAAATACACATATAATTAGGAATTTTCTGTTTTTAAAGAAGGAAAATAAATTTCTCCTTCCTCTTCTTATTTTCTGTAGAGAAAAAAAAATCAGGTAGCGCCGCCCTAGGTTTCTCATCCTCCAAACATACAAATTGAAAAGAAGAAGAAAATTTTTCCCATTGAAAGCTCAAATCAGAAATGGGTTATATGAAATCATATAGAAAGAAGTGTACAAATCCCTTTTTGGTTTGAATGGTTCTTTGGACTGATTTATTTGTCTTCAAATAAAAAACGGGTTATATGATTTGAGCATTTAATTCGAAGATTTCTTCTCTCTAAAATTGAAAGCTCAAGTTACAAGACTGTACGGGCTGAATCGAGAAACCTGATAACTCGGCTTCAGGGTGGGACGACTGAGCTGTTTGACTCGTTGCTTGGACTGTTATAGGAAGATGACAAGAATGTATTGATTGCAATAGCTCAAGGAATTATCCCGTTGCTGGTCCGTTTACTCGATTCGAGTTCTTCGCCAGAGATCAAGTAGAAAATTGTGAGTGCTTTTTTTGTCACAAAAAGGGGTAGGATGGGAGGTGGATTTGGATTTTGAGGGGGTGGGGGGCTAGAGGTGACCAGAAGAGAAAGGGGATGGGGAAAGGAGGTCCAATGAGAGAAATATAGCATTTTTAACATATTATTTATTTTCTTATGTTTAATTTACGTGGATTGCGCGTGTATTTGGTTGTATTTTCACCAACCATGATCAAGTGAGAAAAGGGTTTACAATATTGTGTTTCATTGAATTTAAGTGTTCAGTTGACAGGATCGTAAGCAGAAGGTTCCAATTTACAATCCGACCCAAGTATAAGGGCCTATCAAACCATTTCACCCCCTCCCCCCCCCTCCCCAGGATACCTGCAACCTCCCACTAACAATAGCTATCAGGTAACTCTGCCACTAAGGCTAGAATAGATGGGAAGAAATCACCTAGTGTTTTTTGTCTCTGCTGGTTCAATGCTCTCAACTCACTTCATTGATCACTAGGCCACACCATTGGGTGCCCATTTACTGAAACTTTTTATAATCTCAATTTCCATTTTTCCCCTTGTTCATGCACTCCGATAAAAATTGATATGACTTGTTGTGGACTCCACTTGATATTGAAAGAAAGCAAGTCTGGCAAGATACTTTTGGTATGCATATTTAGTTTGTGTCAAAATTTCTTATTTTTCTTTAATTCCCGTATCCAATCAAATAATTCAGAATGAAATGGGACAAGGGAGTGTTTTATGAGCTTATCCAAAGAACATTGGTGCAACTTTTGGGTTGAAATAAATCATTTTTAGCTGGTTAGCTTGTTATTTGTTAAGAAGTTGACATTTACCGTTTTTGATCCATATAATTGATATTTATGTAAAGAATGTCTTTCATATTTATAAAGTTGATGAGTTTTAAAAAATATTTATAAAGTTGATGTATATATTCCGTAAGAAACAGGATTGGCTAATGTAACTCCAATCATCAAAGTCAAAACTAAAAAGATAACTCTATCTTTTTACTTACCATATAAATTTGGAAGTTCAAGCTTAAAATCTTTCTTTTTCTTTTCAGTTGAATTTATGGAAAAGGCTTCACCAGCTCTTCAGGTTAGAACACCTAGTGCTCAAACCCCTCCTCAGTCAGCTGAGCCAACTGAACAATTGGATGATACTATGGACTTTGCTGTTAATGAAGGACATGGAGTTGCTGA</genome_strand>
        <mrna_strand>GCGGACACTTTCTCAACCCAATTACCCCAACAGCTCACGACGGAACCCTTGAATCTCCAATTTTTTCAATTATCGAAACCCCTAATATTTCAAAACTTCGAAATCCCAATTTCGTAGACTGAAAACCTAATTGAATCGTAATGGCATCGCAGAAGAAGGAATCGGAGGGAATCGCTCTACTGTCTATCTATGGCGACGACGAAGATGAAGACATGGAAGAAGTTGAAGAAGAACAAAGGGAAGAAGATGCACAAGAACACAGACCTGAATCACATAACTTAGGCTTTACAATGGGCACAGAGTTCCAAGATGATAGCAAAAAAGTTTTCGGGTCTGATTCAGGTCGGAGTTCGACTCCTTCACCTCTAATTCAACAACTTCAGCAACAACAGTCTGTTGAAAATTTCACACCTAGCAAGGTTTCGAATTTTGGTGTTGGTTCTACCACTACGACGCCATTAGCGTCCGTTTCTTCCCCAAATCCTCAGCCAATGGAGATGAATTTGAATGTGAATGTGAGTAGACGAGCAAGGCTAACTATTGTTGATTATGCTCATGATGAAGTTACCATGTCACCGGAGCCTGAG....................................................................................................................................................................................................................GAAGGAGAAGTAATGGCTAGTGGAAGAGTCATGTATGGAGCGGAACTTCAAACTGCTAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATTTATGGAAAAGGCTTCACCAGCTCTTCAAGTTAGAACACCTAGTGCTCAAACCCCTCCTCAGTCAGCTGAGCCAACTGAACAATTGGATGATACTATGGACTTTGCTGTTAATGAAGGACATGGAGTTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568156" ref_strand="-" ref_description="SGN-U568156 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|49333396|gb|AAT64035.1| (e_value=6e-51) predicted; (*ATH) AT1G29220.1 (e_value=3e-49) | Symbol: None | transcriptional regulator family protein, similar to Transcriptional regulator protein HCNGP (Swiss-Prot:Q02614) (Mus musculus) | chr1:10210506-10212679 REVERSE | Aliases: F28N24.10, F28N24_10; (*SWP) sp|Q9UHR5|S30BP_HUMAN (e_value=5e-12) SAP30-binding protein OS=Homo sapiens GN=SAP30BP; ">
      <seq>ggaagaatctgttatggttcctgcagaagaacaaaaagagttagatctgttggagaaatttcttcctcctccaccaaaggagaagtgctcagatgaattgcaagagaagatcatgaaattccttgctctgaagaagactactggcagaagctttaatgcagaagtacgcaacagaaaggagtatcggaatccagacttcttgctgcattcagtgacttatcaagatattgaccagataggatcttgcttcagcaaagacgtattcgatccgcatggatatgacaaaagcgacttctatgatgaaatagaggctgactcaaagcgtgaaatggagagaagggagcaagaacggaggaggagtccaaaagttgacttcatatcgggaggaacacagcctgcaccgatggttcctacaccaaaaatcaatctgtcgattccagggatggctcctgttgctgctggtgcattaccgcccactgtagatgttgtaactcgggatggtagacagaacaaaaagtcgaaatgggacaaggtggatggtgatcggagagaccctgtttctgctgttggtgcacatgcagcacttctatcagctgctaatgctggtgctggttacactgcatttgcgcaacaaagacgtcgggaggcagaagagaagcgacctagtgacaagaagttggatagaagatcttgaaaatctaattagacatgcgactcctgaaagctattgaccctttccaacacatccagtcatgcacaagtgttggcacaaagaaagcagttagagcaacgggtgcctcatttagaaagacaaattactgtcaactctgaatattcccatatactgtatatacccagtttttgtttagtagtgaagtcgattccaggtttcacaagttcaaggagtgtcgagttttccatataaagctggggagaaaacaaatgccccagtcttcttttgcccatgtgcccccatcgattcccaattattaagttgtactctttgccctagagtcctaaaagagctgaatttttttaatgtacttgaaaagttaaccaatatagaaaaaaaaaaatcgagggggggcccgtaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="39590" stop="44762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39889" g_stop="39991" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39992" i_stop="40710" i_length="719">
            <donor d_prob="0.810" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40711" g_stop="40915" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="308" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40916" i_stop="41335" i_length="420">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41336" g_stop="41467" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="440" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41468" i_stop="41552" i_length="85">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41553" g_stop="41644" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="532" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41645" i_stop="41734" i_length="90">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41735" g_stop="41829" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="627" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41830" i_stop="44035" i_length="2206">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44036" g_stop="44458" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="1051" r_length="424" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1064" polyA_stop="1076"/>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U568156" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>1050</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568156" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="39889" e_stop="39991"/>
          <exon e_start="40711" e_stop="40915"/>
          <exon e_start="41336" e_stop="41467"/>
          <exon e_start="41553" e_stop="41644"/>
          <exon e_start="41735" e_stop="41829"/>
          <exon e_start="44036" e_stop="44458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGAATCTGTTATGGTTCCTGCAGAAGAACAAAAAGAGTTAGATCTGTTGGAGAAATTTCTTCCTCCTCCACCAAAGGAGAAGTGCTCAGATGAATTGCAAGTAAGTGTGGTGACAGTAGTATTTTTCAAATGGATACTAGAAATATGCTTCCATAAAATGTATATGCACTATTCTGAGGTTTCCGAGTTTTCTCTAATAGATGTTGAAAGTTGAAGATTGCATCTTCAGTTTTGTTTCTGTAGTGTACGTTTAGATGATATTGGTAATTTATATGTGTCTTGCGTTATATGTTTATTTTATGTCTTTTAAAACGACTTTGCATTTTATGCAGTGCCTTTCTGTAGTAGTTTGTGAAGGAATGTTTACATGTGGACTGGCTGACGTTGAACTCTGTGCTCGCTAAATCTCTCTCTCCTCTCACAGACAGAATGTCTCAGTCTATCTCTCCCTCTCACTCAGACACACACACGCACACACGAAGTTTGCATTTCCTGTAATTTCATCTCTAGATTCTTATCACTTCAGATACTGACAATTGTTTGTAAAAGCTGTCTGTCTTCAGTAACCGTGGCATTGGATGCTCTGTTATCTTTAACTGATATACTCGGGAGCTTAACTTGCAATTTACGTCCTCCTAAAGTGATCCGTTATAACTTCTACAGTGACTCTGATCATTTTTGTCTTCCTTTCCAATTTTATGTGAACCTTACTGTTTATGTATAAGAAGGCCTTATGGTGTTTACCCTGTTGCATAGATAATTGATTTGGCTACTTTGCTTTCAATTGTTACACTGTTTTCTTGTTAATTCATTCTGCAGGAGAAGATCATGAAATTCCTTGCTCTGAAGAAGACTACTGGCAGAAGCTTTAATGCAGAAGTACGCAACAGAAAGGAGTATCGGAATCCAGACTTCTTGCTGCATTCAGTGACTTATCAAGATATTGACCAGATAGGATCTTGCTTCAGCAAAGACGTATTCGATCCGCATGGATATGACAAAAGCGACTTCTATGATGAAATAGGTTACTAGCAATAAAATTTCTGTCTTCTGTCTATCTTTCAGCTAGATATATCTACTTTTGTGTGGCATTGGTTATAGAATGTTTAGACAGTGTTTGCTACTTCCGCTGTAATGTTTTTGTTAACAAAATAGTTCATTCTGTGAATCTGGAACGGTAACGATGGATACTTATGGATCTAATTGTGTGTCACAAGGATTCTGACGGTGTGTAGCTAATACTATACTTCCCTTTCCAACTTATTGTTTGGAGCTAGTGTAAAGGATATCTAGTTCTTTTGAGTTTAAGCTTTCATGAAATTTGGTCTGTTTCAGTGCAAGAATAGTTTTCCTCAAATTTATGGATAATTTCTTGTCTTTGAAGTATATCTTATCATACTTTATCCAAAAGAAATCTTGACTGGAACATTTATTTTGTAAACAGAGGCTGACTCAAAGCGTGAAATGGAGAGAAGGGAGCAAGAACGGAGGAGGAGTCCAAAAGTTGACTTCATATCGGGAGGAACACAGCCTGCACCGATGGTTCCTACACCAAAAATCAATCTGTCGATTCCAGGTTACCCACCTTTCTTCCTCGAGTCAAAATTTCTGTTGAATTGGTTGAGTTCCCTGCATCACTTTGCTCTCTGAATTCTTTGCAGGGATGGCTCCTGTTGCTGCTGGTGCATTACCGCCCACTGTAGATGTTGTAACTCGGGATGGTAGACAGAACAAAAAGTCGAAATGGGACAAGGTTTTCATCTGCAAAGTCTCAATTAATTGCATTGATTATAATTTATCTCCAATGTCTCTTGTATTGTAATCTTCAATGCTACCTTTTCAGGTGGATGGTGATCGGAGAGACCCTGTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTACACTGCATTTGCGTAAGTTCATTATGACTCCCATTTTTAACTGTATTACTTAGTTATTTTAGAATTTCTTTCCATCACGCACCATGGGATGGGAAAGCCTTAGATTCGTAGGGTGGACTTCTAGCTATCTAACAAAAATGAGACTCGTGTATTACTTTCTGGAAAATAAATGATGTCGAGTATGGTGAATTAAAAACGAAACATGTTGTTCAAGTCCCATATCTTTTGATCTTTTACATATTGTGGCGACCCATAGATTCCTCTAAGATATACCTTGTTGGAAGTGTGCAAATGTTTAAATAGGTTGAGCACCTGCTTTGACTGACCTAGGGGCGCAACTTCAGCCCATATAAGGTGAAAGGAAACCATTTAACCTATATTTATTTATATGGATCACTCATATTTTCTAAATGGGTAAACATGGGCTAATCTATTTTAACTTTTAAGAGCTCATACAAATATGCACAAAATAGGTAAATTATGAGAATCCATATAGACCCATAGATCATCGACTCATAAGAAAAATTCTTCATCGCATAAAAAAATTATTTATTTTTATAAAAGAACATTAGGAGTAGGGTTAGAGGTGAGGGTGAAAAAAATTTAACTTCTTTTTTTGATTTTTTCTTTCTAAAAAATTGTGGGTGGGTGAGGGTAGGGTGGAGGTAGGGGTTTATGAAAAAAAAATTAACTTTTCTTTTTTGATTTTTTTAAAAATAATTGTAGGTGGGGTCGGGGCAGGGAGGTCTGCAGGGGATTAATTATTTTTTGAATTTTTTATTTTTATTTAAAAAAATTTGGGAGTGGAGGTACGGTGGAAGTGGGAGTGGAAGCGGTGAAATTTTTTAACTTTTTCTTTTGAAGTTTTTATTTTTCTTTAAAAAAAAATTTGGGGTAGGGTGGAGGAACATTTTTTTTTTTTGAAATTTATGTCAATATTTTTTTTTAAAAAAAATGGTGGTGGAGCGGGGATTGGTAGGATGGACAAATTTTTCTGATATTTTTTAAATTGAAAATTGGGGGTGGGGGATTGGGTACAGTGGTAGAAAAAATTAATTTTTTTTTGTATGAATTTTTTTTTTAGTTATTCTTTAAGAATAGGGGTGGGTTGGTAGGAGTTTGGCTTTAGGAGATCAAAGTGGGTTAGAACCATTTTACCTAAACCATACTTACTCATATTTTATGTGGGTGAATTGTAATCCAATCCATTTTGGCTCAATCCATATTTAATCCATCAATTCCGATCCAGTCAAACCATTTGCCACCCCAACTTAGTCCGACCATTTGCCAACCCAACTTTGGCGTTTGAGCAAGATTTGAGAATACTGGAAAATGGTTATCTAGCCTCTTATTTATCTGTAGAATGGTGAAGTATTGGTTTCTTAGGAGATACTCCTTTAATGATATTGTATGCTCTTTTCTTTTGGTGAAATCTTATCCTATCTTTATGTAGGTTGACTGGTTGAGGCACTTTTCCTGCCTAGCTGTTGTATTCTTAATGTTTGTAACATCCATTTTCTGGTGAAAATTTTGACAAAAGCATCTCATTCTCAAGTTCACATGGAACTCACTATACTCCCCTGACAAAAACATCTCATTCTCAATTCATAAGGAGTTTCCCGGCATTTGTGCTGTCTGTGAAATTAGTAGAGGAAAGAAAAGACTTCCTATACTTGGTGGATAGAGTTACTTGGTATATATATGGATGGAGGTAGGAGGTATAACGTGGAATTAGTTGAAGTGCGCAAGAACTAAAAGGAGTTTCTTTAGATTAGACACACTTCTTAGGACACTGCTATTTCTATTCGGGGGTGGGGGGGGGGGGGTGGGGGTTATATTTTTGTTTTAGTCAAACTTGTAGAAAAAAGTGAACTTCAAATTACAGGGGGAGGGGGGGGGGGGGGGTTTACATCCTGAAATACCAGTCTAATAGCTTTCACACTCAAATGATAGGAACAATCCATGCTGTCTAATTCATTCACACACACTTGAACTTCTATTTAAGTTTCACTCCATATTGTTTCTGTGGGTCATGCAACCCTATCCTCACTGAGTAGCTAGTACTTAGGGACTTCATTGAAAAATGAGATTCACGTTTCACCTTTTTATTACCCTTTGAAGTCCAAAGACCTTTTATCCTCGTTGTTTTCAGATGTAGACATGTTTGATGTTTCATTCAGCAGAGGGTGGAGTGATGTTTAATTTTTGTTTTCCACAGGCAACAAAGACGTCGGGAGGCAGAAGAGAAGCGACCTAGTGACAAGAAGTTGGATAGAAGATCTTGAAAATCTAATTAGACATGCGACTCCTGAAAGCTATTGACCCTTTCCAACACATCCAGTCATGCACAAGTGTTGGCACAAAGAAAGCAGTTAGAGCAACGGGTGCCTCATTTAGAAAGACAAATTACTGTCAACTCTGAATATTCCCATATACTGTATATACCCAGTTTTTGTTTAGTAGTGAAGTCGATTACAGGTTTTA-AAGTTAAAGGAGTGTAGAGTTTTCAATATAAAGCTGGGGAGAAAAAAAATGTACAAGTCTTCTTTTGGCCATGTG-CGCCATAGATTGCAAATTATTAAGTTGTACTCTTTG-ACTAGAGTCCTAAAAGAGCTGAAATTTTTTTAATGTACTTTGAAAA</genome_strand>
        <mrna_strand>GGAAGAATCTGTTATGGTTCCTGCAGAAGAACAAAAAGAGTTAGATCTGTTGGAGAAATTTCTTCCTCCTCCACCAAAGGAGAAGTGCTCAGATGAATTGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGATCATGAAATTCCTTGCTCTGAAGAAGACTACTGGCAGAAGCTTTAATGCAGAAGTACGCAACAGAAAGGAGTATCGGAATCCAGACTTCTTGCTGCATTCAGTGACTTATCAAGATATTGACCAGATAGGATCTTGCTTCAGCAAAGACGTATTCGATCCGCATGGATATGACAAAAGCGACTTCTATGATGAAATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTGACTCAAAGCGTGAAATGGAGAGAAGGGAGCAAGAACGGAGGAGGAGTCCAAAAGTTGACTTCATATCGGGAGGAACACAGCCTGCACCGATGGTTCCTACACCAAAAATCAATCTGTCGATTCCAG.....................................................................................GGATGGCTCCTGTTGCTGCTGGTGCATTACCGCCCACTGTAGATGTTGTAACTCGGGATGGTAGACAGAACAAAAAGTCGAAATGGGACAAG..........................................................................................GTGGATGGTGATCGGAGAGACCCTGTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTACACTGCATTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAAGACGTCGGGAGGCAGAAGAGAAGCGACCTAGTGACAAGAAGTTGGATAGAAGATCTTGAAAATCTAATTAGACATGCGACTCCTGAAAGCTATTGACCCTTTCCAACACATCCAGTCATGCACAAGTGTTGGCACAAAGAAAGCAGTTAGAGCAACGGGTGCCTCATTTAGAAAGACAAATTACTGTCAACTCTGAATATTCCCATATACTGTATATACCCAGTTTTTGTTTAGTAGTGAAGTCGATTCCAGGTTTCACAAGTTCAAGGAGTGTCGAGTTTTCCATATAAAGCTGGGGAGAAAACAAATGCCCCAGTCTTCTTTTGCCCATGTGCCCCCATCGATTCCCAATTATTAAGTTGTACTCTTTGCCCTAGAGTCCTAAAAGAGCTG-AATTTTTTTAATGTAC-TTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588357" ref_strand="+" ref_description="SGN-U588357 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtactccaaaaagtcgaaatgggacaaggtggatggtgatcggagagaccctgtttctgctgttggtgcacatgcagcacttctatcagctgctaatgctggtgctggttacactgcatttgcgcaacaaagacgtcgggaggcagaagagaagcgacctagtgacaagaagttggatagaagatcttgaaaatctaattagacatgcgactcctgaaagctattgaccctttccaacacatccagtcatgcacaagtgttggcacaaagaaagcagttagagcaacgggtgcctcatttagaaagacaaattactgtcaactctgaatattcccatatactgtatatacccagtttttgtttagtagtgaagtcgattacaggttttaaagttaaaggagtgtagagttttcaatataaagctggggagaaaaaaaatgtacaagtcttcttttggccatgtgcgccatagattgcaaattattaagttgtactctttgactagagtcctaaaagagctgaaattttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="41323" stop="44743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41617" g_stop="41644" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.821"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41645" i_stop="41734" i_length="90">
            <donor d_prob="0.941" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41735" g_stop="41829" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="123" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41830" i_stop="44035" i_length="2206">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44036" g_stop="44443" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="531" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U588357" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41617" e_stop="41644"/>
          <exon e_start="41735" e_stop="41829"/>
          <exon e_start="44036" e_stop="44443"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAACAAAAAGTCGAAATGGGACAAGGTTTTCATCTGCAAAGTCTCAATTAATTGCATTGATTATAATTTATCTCCAATGTCTCTTGTATTGTAATCTTCAATGCTACCTTTTCAGGTGGATGGTGATCGGAGAGACCCTGTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTACACTGCATTTGCGTAAGTTCATTATGACTCCCATTTTTAACTGTATTACTTAGTTATTTTAGAATTTCTTTCCATCACGCACCATGGGATGGGAAAGCCTTAGATTCGTAGGGTGGACTTCTAGCTATCTAACAAAAATGAGACTCGTGTATTACTTTCTGGAAAATAAATGATGTCGAGTATGGTGAATTAAAAACGAAACATGTTGTTCAAGTCCCATATCTTTTGATCTTTTACATATTGTGGCGACCCATAGATTCCTCTAAGATATACCTTGTTGGAAGTGTGCAAATGTTTAAATAGGTTGAGCACCTGCTTTGACTGACCTAGGGGCGCAACTTCAGCCCATATAAGGTGAAAGGAAACCATTTAACCTATATTTATTTATATGGATCACTCATATTTTCTAAATGGGTAAACATGGGCTAATCTATTTTAACTTTTAAGAGCTCATACAAATATGCACAAAATAGGTAAATTATGAGAATCCATATAGACCCATAGATCATCGACTCATAAGAAAAATTCTTCATCGCATAAAAAAATTATTTATTTTTATAAAAGAACATTAGGAGTAGGGTTAGAGGTGAGGGTGAAAAAAATTTAACTTCTTTTTTTGATTTTTTCTTTCTAAAAAATTGTGGGTGGGTGAGGGTAGGGTGGAGGTAGGGGTTTATGAAAAAAAAATTAACTTTTCTTTTTTGATTTTTTTAAAAATAATTGTAGGTGGGGTCGGGGCAGGGAGGTCTGCAGGGGATTAATTATTTTTTGAATTTTTTATTTTTATTTAAAAAAATTTGGGAGTGGAGGTACGGTGGAAGTGGGAGTGGAAGCGGTGAAATTTTTTAACTTTTTCTTTTGAAGTTTTTATTTTTCTTTAAAAAAAAATTTGGGGTAGGGTGGAGGAACATTTTTTTTTTTTGAAATTTATGTCAATATTTTTTTTTAAAAAAAATGGTGGTGGAGCGGGGATTGGTAGGATGGACAAATTTTTCTGATATTTTTTAAATTGAAAATTGGGGGTGGGGGATTGGGTACAGTGGTAGAAAAAATTAATTTTTTTTTGTATGAATTTTTTTTTTAGTTATTCTTTAAGAATAGGGGTGGGTTGGTAGGAGTTTGGCTTTAGGAGATCAAAGTGGGTTAGAACCATTTTACCTAAACCATACTTACTCATATTTTATGTGGGTGAATTGTAATCCAATCCATTTTGGCTCAATCCATATTTAATCCATCAATTCCGATCCAGTCAAACCATTTGCCACCCCAACTTAGTCCGACCATTTGCCAACCCAACTTTGGCGTTTGAGCAAGATTTGAGAATACTGGAAAATGGTTATCTAGCCTCTTATTTATCTGTAGAATGGTGAAGTATTGGTTTCTTAGGAGATACTCCTTTAATGATATTGTATGCTCTTTTCTTTTGGTGAAATCTTATCCTATCTTTATGTAGGTTGACTGGTTGAGGCACTTTTCCTGCCTAGCTGTTGTATTCTTAATGTTTGTAACATCCATTTTCTGGTGAAAATTTTGACAAAAGCATCTCATTCTCAAGTTCACATGGAACTCACTATACTCCCCTGACAAAAACATCTCATTCTCAATTCATAAGGAGTTTCCCGGCATTTGTGCTGTCTGTGAAATTAGTAGAGGAAAGAAAAGACTTCCTATACTTGGTGGATAGAGTTACTTGGTATATATATGGATGGAGGTAGGAGGTATAACGTGGAATTAGTTGAAGTGCGCAAGAACTAAAAGGAGTTTCTTTAGATTAGACACACTTCTTAGGACACTGCTATTTCTATTCGGGGGTGGGGGGGGGGGGGTGGGGGTTATATTTTTGTTTTAGTCAAACTTGTAGAAAAAAGTGAACTTCAAATTACAGGGGGAGGGGGGGGGGGGGGGTTTACATCCTGAAATACCAGTCTAATAGCTTTCACACTCAAATGATAGGAACAATCCATGCTGTCTAATTCATTCACACACACTTGAACTTCTATTTAAGTTTCACTCCATATTGTTTCTGTGGGTCATGCAACCCTATCCTCACTGAGTAGCTAGTACTTAGGGACTTCATTGAAAAATGAGATTCACGTTTCACCTTTTTATTACCCTTTGAAGTCCAAAGACCTTTTATCCTCGTTGTTTTCAGATGTAGACATGTTTGATGTTTCATTCAGCAGAGGGTGGAGTGATGTTTAATTTTTGTTTTCCACAGGCAACAAAGACGTCGGGAGGCAGAAGAGAAGCGACCTAGTGACAAGAAGTTGGATAGAAGATCTTGAAAATCTAATTAGACATGCGACTCCTGAAAGCTATTGACCCTTTCCAACACATCCAGTCATGCACAAGTGTTGGCACAAAGAAAGCAGTTAGAGCAACGGGTGCCTCATTTAGAAAGACAAATTACTGTCAACTCTGAATATTCCCATATACTGTATATACCCAGTTTTTGTTTAGTAGTGAAGTCGATTACAGGTTTTAAAGTTAAAGGAGTGTAGAGTTTTCAATATAAAGCTGGGGAGAAAAAAAATGTACAAGTCTTCTTTTGGCCATGTGCGCCATAGATTGCAAATTATTAAGTTGTACTCTTTGACTAGAGTCCTAAAAGAGCTGAAATTTTTTT</genome_strand>
        <mrna_strand>GTACTCCAAAAAGTCGAAATGGGACAAG..........................................................................................GTGGATGGTGATCGGAGAGACCCTGTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTACACTGCATTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAAGACGTCGGGAGGCAGAAGAGAAGCGACCTAGTGACAAGAAGTTGGATAGAAGATCTTGAAAATCTAATTAGACATGCGACTCCTGAAAGCTATTGACCCTTTCCAACACATCCAGTCATGCACAAGTGTTGGCACAAAGAAAGCAGTTAGAGCAACGGGTGCCTCATTTAGAAAGACAAATTACTGTCAACTCTGAATATTCCCATATACTGTATATACCCAGTTTTTGTTTAGTAGTGAAGTCGATTACAGGTTTTAAAGTTAAAGGAGTGTAGAGTTTTCAATATAAAGCTGGGGAGAAAAAAAATGTACAAGTCTTCTTTTGGCCATGTGCGCCATAGATTGCAAATTATTAAGTTGTACTCTTTGACTAGAGTCCTAAAAGAGCTGAAATTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582048" ref_strand="+" ref_description="SGN-U582048 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157354720|emb|CAO48038.1| (e_value=3e-25) unnamed; (*ATH) AT2G34190.1 (e_value=3e-26) | Symbol: None | xanthine/uracil permease family protein, contains Pfam profile: PF00860 permease family | chr2:14443888-14446595 FORWARD | Aliases: F13P17.3, F13P17_3; (*SWP) sp|Q94C70|NAT2_ARATH (e_value=2e-25) Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2; ">
      <seq>gggctatgatggttgctgtgtttctcgacaacacactggactacaaggacagtgccaaagataggggaatgccatggtgggtgaagttcaggacatttaagggtgatagtagaaatgaagagttttacaccctccctttcaatctcaaccgcttctttcctccttcatgatcatgtttgcgatatatctggaccagaagaggaaggatgtgaaagtgaaatttgagaagagtttgatctcagggttgatcccttatgatatatttgaatcaaagaacaaactctatgtaggcagttgtgatgaaattcctaggaagtagacatcagttgacatgaatattattttttcatttatttgtagtcaaaaatgtcaaggcctattttggcataatgagaagattttcttattccttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="51962" stop="52974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52261" g_stop="52674" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U582048" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52261" e_stop="52674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTATGATGGTTGCTGTGTTTCTCGACAACACACTGGACTACAAGGACAGTGCCAAAGATAGGGGAATGCCATGGTGGGTGAAGTTCAGGACATTTAAGGGTGATAGTAGAAATGAAGAGTTTTACACCCTCCCTTTCAATCTCAACCGCTTCTTTCCTCCTTCATGATCATGTTTGCGATATATCTGGACCAGAAGAGGAAGGATGTGAAAGTGAAATTTGAGAAGAGTTTGATCTCAGGGTTGATCCCTTATGATATATTTGAATCAAAGAACAAACTCTATGTAGGCAGTTGTGATGAAATTCCTAGGAAGTAGACATCAGTTGACATGAATATTATTTTTTCATTTATTTGTAGTCAAAAATGTCAAGGCCTATTTTGGCATAATGAGAAGATTTTCTTATTCCTTAC</genome_strand>
        <mrna_strand>GGGCTATGATGGTTGCTGTGTTTCTCGACAACACACTGGACTACAAGGACAGTGCCAAAGATAGGGGAATGCCATGGTGGGTGAAGTTCAGGACATTTAAGGGTGATAGTAGAAATGAAGAGTTTTACACCCTCCCTTTCAATCTCAACCGCTTCTTTCCTCCTTCATGATCATGTTTGCGATATATCTGGACCAGAAGAGGAAGGATGTGAAAGTGAAATTTGAGAAGAGTTTGATCTCAGGGTTGATCCCTTATGATATATTTGAATCAAAGAACAAACTCTATGTAGGCAGTTGTGATGAAATTCCTAGGAAGTAGACATCAGTTGACATGAATATTATTTTTTCATTTATTTGTAGTCAAAAATGTCAAGGCCTATTTTGGCATAATGAGAAGATTTTCTTATTCCTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604002" ref_strand="+" ref_description="SGN-U604002 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=2e-152) copia; (*ATH) AT4G23160.1 (e_value=1e-36) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=4e-86) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>gggtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="59131" stop="57723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58832" g_stop="58023" g_length="810"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="810" r_length="810" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U604002" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58832" e_stop="58023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575023" ref_strand="+" ref_description="SGN-U575023 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=0) copia; (*ATH) AT4G23160.1 (e_value=3e-26) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=2e-68) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>ganggnntgctcgacatcgtacagtcagaaatacaccacagcagaacggtgtagctgagcggatgaatcaaacacttctggagagagcaaggtgcatgctctctaatgctgggctagatagaagattctgggcagaagcggttagtacagcttgctacttgattaaccgcggaccacatacaggcatacagtgcaagacacctatggagatgtggtcagaaaaagctgctgattattcaaatctgaaagcttttggttgtatggcctactatcacgtcagtgaaggtaagttagaaccaagagctaaaaagggagtatttgtgggctacggagatggagtgaaaggtttcagaatctggtctccagcagaaaagagggttattatgagcaggaacgttgtctttgatgaaagttctctgcttagaaccattgtgaagcctacaactacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgactcagccggatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="60233" stop="58529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59934" g_stop="58829" g_length="1106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1106" r_length="1106" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U575023" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1106</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59934" e_stop="58829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAGATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGACCACATACAGGTATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACGGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTCCTCTGCTTAGAACCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGT</genome_strand>
        <mrna_strand>GANGGNNTGCTCGACATCGTACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAGATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGACCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCAGAAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTATGGCCTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTCTCTGCTTAGAACCATTGTGAAGCCTACAACTACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603118" ref_strand="+" ref_description="SGN-U603118 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=8e-56) copia; (*SWP) sp|P10978|POLX_TOBAC (e_value=2e-23) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>cctagagttttgtgaacattgtgtttttggaaaactacatcgcaacaagtttccaaaggccattcatagaacaaaaggcacacttgattatatccattctgattgctggggtccatgccgtgttgagtctttgggaggctgcagattttttgtgtccattattgatgactactcaaggatgacttgggtgtacatgatgaagcataaaagtgaagccttccagaagtttaaggagtggaaaattttgatggaaaatcaaacagggaagaagatcaagaggttgcgaactgataatgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="60575" stop="59677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60275" g_stop="59977" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U603118" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60275" e_stop="59977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</genome_strand>
        <mrna_strand>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTTAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568624" ref_strand="+" ref_description="SGN-U568624 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157344665|emb|CAO70048.1| (e_value=6e-19) unnamed; (*ATH) AT3G47570.1 (e_value=1e-12) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative, protein kinase Xa21 - Oryza sativa, PIR:A57676 | chr3:17538492-17541914 FORWARD | Aliases: F1P2.120; ">
      <seq>ggaaaagccatgttatgtttgtccaaaagggtgactctggttttcaaaatggtattttaaatttagtagtaattaacaatcagtattgactttcattggtctgattctatacttcttttctatttttatatgttgaggaattttcatggaaaatactaatgaattcaactctaacatcatcattgtttgtccctttccaccatttctcttgattgaccctaaagataacaattgcttgaatttttaattcaattgtattttttaaaatcattttatgtgtaatgtggtttataccttagtgtttactggaacaaacatactgtattctaacatgtacacaaccatgatgagaaaaatcaatttccttttccctctcttagtttcaatatggcatcatttgctgatattatcagccactgcagaagtcaatctcaaaactgatgaagcttctctacttgctttgaaatcctatgttacttccgatacttacaatatcttgtcaagcaactggacctcaactacttctgtttgcaattggattggagtcacctgcggctctcgccatcaaagagttataaccctggatatttctgatatgggattagtaagcaccatccctccctcacttgggaaatcagtcctttttgggtttctctcgatatcagtagcaacagcttccaaggaattttgccacgagagttggctaatttgcatagattggagtttataaatgtcacttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="66929" stop="65590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66629" g_stop="65890" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U568624" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66629" e_stop="65890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGCCATGTTATGTTTGTCCAAAAGGGTGACTCTGGTTTTCAAAATGGTATTTTAAATTTAGTAGTAATTAACAATCAGTATTGACTTTCATTGGTCTGATTCTATACTTCTTTTCTATTTTTATATGTTGAGGAATTTTCATGGAAAATACTAATGAATTCAACTCTAACATCATCATTGTTTGTCCCTTTCCACCATTTCTCTTGATTGACCCTAAAGATAACAATTGCTTGAATTTTTAATTCAATTGTATTTTTTAAAATCATTTTATGTGTAATGTGGTTTATACCTTAGTGTTTACTGGAACAAACATACTGTATTCTAACATGTACACAACCATGATGAGAAAAATCAATTTCCTTTTCCCTCTCTTAGTTTCAATATGGCATCATTTGCTGATATTATCAGCCACTGCAGAAGTCAATCTCAAAACTGATGAAGCTTCTCTACTTGCTTTGAAATCCTATGTTACTTCCGATACTTACAATATCTTGTCAAGCAACTGGACCTCAACTACTTCTGTTTGCAATTGGATTGGAGTCACCTGCGGCTCTCGCCATCAAAGAGTTATAACCTTGGATATTTCTGATATGGGATTAGTAGGCACCATCCCT-CCTCACTTGGGAAATCTGTCCTTTTT-GGTTTCTCTCGATATCAGTAGCAACAGCTTCCAAGGAATTTTGCCACGAGAGTTGGCTAATTTGCATAGATTGGAGTTTATAAATGTCACTTCTA</genome_strand>
        <mrna_strand>GGAAAAGCCATGTTATGTTTGTCCAAAAGGGTGACTCTGGTTTTCAAAATGGTATTTTAAATTTAGTAGTAATTAACAATCAGTATTGACTTTCATTGGTCTGATTCTATACTTCTTTTCTATTTTTATATGTTGAGGAATTTTCATGGAAAATACTAATGAATTCAACTCTAACATCATCATTGTTTGTCCCTTTCCACCATTTCTCTTGATTGACCCTAAAGATAACAATTGCTTGAATTTTTAATTCAATTGTATTTTTTAAAATCATTTTATGTGTAATGTGGTTTATACCTTAGTGTTTACTGGAACAAACATACTGTATTCTAACATGTACACAACCATGATGAGAAAAATCAATTTCCTTTTCCCTCTCTTAGTTTCAATATGGCATCATTTGCTGATATTATCAGCCACTGCAGAAGTCAATCTCAAAACTGATGAAGCTTCTCTACTTGCTTTGAAATCCTATGTTACTTCCGATACTTACAATATCTTGTCAAGCAACTGGACCTCAACTACTTCTGTTTGCAATTGGATTGGAGTCACCTGCGGCTCTCGCCATCAAAGAGTTATAACCCTGGATATTTCTGATATGGGATTAGTAAGCACCATCCCTCCCTCACTTGGGAAATCAGTCCTTTTTGGGTTTCTCTCGATATCAGTAGCAACAGCTTCCAAGGAATTTTGCCACGAGAGTTGGCTAATTTGCATAGATTGGAGTTTATAAATGTCACTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562626" ref_strand="+" ref_description="SGN-U562626 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157348365|emb|CAO23152.1| (e_value=3e-53) unnamed; (*ATH) AT3G47570.1 (e_value=6e-30) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative, protein kinase Xa21 - Oryza sativa, PIR:A57676 | chr3:17538492-17541914 FORWARD | Aliases: F1P2.120; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=9e-22) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>gctcagcacctgtgattcattgtgatctgaagcctagcaatgtcttgctagatgaaaacatggtagctcatttaagtgactttggcatttctaaactactcagtgaagatgagagtgatttacacactaaaaccttagcaacattcggctacattgcaccagagtatggaagggaaggattgctgtcgctaaaatgtgatgtttatagttacgggatcatgctgatggaaacattcacgaggagaaggccgaacgatgaaatatttgatgaagatcttagtttaaagaaatgggtgagtgattcactcccagaggcaacaatcaaagttgtagatgcgaattttctaacaccagaagatgagaaattcatggaaaagatagattgtgtagcatccatcatgaaagtggcactggattgctctgctgaatctcctgaagaaaggatctacatgaaagatgttgtaggaacactacaaaagatcaagattcaacttctttcatgttccgcaagtgcataaagacatttgactcatgtcacttgagggtatagaaagtgtttggttaactttttagctgcatacctagactgttttcctttctagctgcataagatattcctattcttattgagatcctttgtgaattttggcctgtttggttccaaattgctttttcctaattctcatgaaataaattttataatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="68542" stop="67145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68242" g_stop="68081" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68080" i_stop="67987" i_length="94">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67986" g_stop="67445" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="704" r_length="542" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U562626" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68242" e_stop="68081"/>
          <exon e_start="67986" e_stop="67445"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCAGCACCTGTGATTCATTGTGATCTGAAGCCTAGCAATGTCTTGCTAGATGAAAACATGGTAGCTCATTTAAGTGACTTTGGCATTTCTAAACTACTCAGTGAAGATGAGAGTGATTTACACACTAAAACCTTAGCAACATTCGGCTACATTGCACCAGGTAAATAAAATCTATTATACTTCCTGTTTCAGTATCCTATCTTTGTTTTCCTTTTCTCGGATTAAATGATAATCCGTAAGTGTTTTTATTGTAGAGTATGGAAGGGAAGGATTGCTGTCGCTAAAATGTGATGTTTATAGTTACGGGATCATGCTGATGGAAACATTCACGAGGAGAAGGCCGAACGATGAAATATTTGATGAAGATCTTAGTTTAAAGAAATGGGTGAGTGATTCACTCCCAGAGGCAACAATCAAAGTTGTAGATGCGAATTTTCTAACACCAGAAGATGAGAAATTCATGGAAAAGATAGATTGTGTAGCATCCATCATGAAAGTGGCACTGGATTGCTCTGCTGAATCTCCTGAAGAAAGGATCTACATGAAAGATGTTGTAGGAACACTACAAAAGATCAAGATTCAACTTCTTTCATGTTCCGCAAGTGCATAAAGACATTTGACTCATGTCACTTGAGGGTATAGAAAGTGTTTGGTTAACTTTTTAGCTGCATACCTAGACTGTTTTCCTTTCTAGCTGCATAAGATATTCCTATTCTTATTGAGATCCTTTGTGAATTTTGGCCTGTTTGGTTCCAAATTGCTTTTTCCTAATTCTCATGAAATAAATTTTATAATC</genome_strand>
        <mrna_strand>GCTCAGCACCTGTGATTCATTGTGATCTGAAGCCTAGCAATGTCTTGCTAGATGAAAACATGGTAGCTCATTTAAGTGACTTTGGCATTTCTAAACTACTCAGTGAAGATGAGAGTGATTTACACACTAAAACCTTAGCAACATTCGGCTACATTGCACCAG..............................................................................................AGTATGGAAGGGAAGGATTGCTGTCGCTAAAATGTGATGTTTATAGTTACGGGATCATGCTGATGGAAACATTCACGAGGAGAAGGCCGAACGATGAAATATTTGATGAAGATCTTAGTTTAAAGAAATGGGTGAGTGATTCACTCCCAGAGGCAACAATCAAAGTTGTAGATGCGAATTTTCTAACACCAGAAGATGAGAAATTCATGGAAAAGATAGATTGTGTAGCATCCATCATGAAAGTGGCACTGGATTGCTCTGCTGAATCTCCTGAAGAAAGGATCTACATGAAAGATGTTGTAGGAACACTACAAAAGATCAAGATTCAACTTCTTTCATGTTCCGCAAGTGCATAAAGACATTTGACTCATGTCACTTGAGGGTATAGAAAGTGTTTGGTTAACTTTTTAGCTGCATACCTAGACTGTTTTCCTTTCTAGCTGCATAAGATATTCCTATTCTTATTGAGATCCTTTGTGAATTTTGGCCTGTTTGGTTCCAAATTGCTTTTTCCTAATTCTCATGAAATAAATTTTATAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576410" ref_strand="+" ref_description="SGN-U576410 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|147852480|emb|CAN78527.1| (e_value=2e-73) hypothetical; (*ATH) AT3G47570.1 (e_value=2e-46) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative, protein kinase Xa21 - Oryza sativa, PIR:A57676 | chr3:17538492-17541914 FORWARD | Aliases: F1P2.120; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=4e-30) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>cagaacagcttgcagggtgaaattccttttagtggtcctttcaagaacctttccagcctgtcattcatgttcaatgaagcattgtgtggtgctccaagatttcatgtcccttcgtgccccacttcttcaaaccatagatcaaagaggaagaagttacttctgatagtctttcctctactcggagctgctgtgacaattgtttttgtaacattggcatttgtgtggatgaggtacagaaaagaaggaaatgttccagtccaagctgatttgttagctacaagggaaagaatttcatactatgaaatcatacaagccacaaatgattttagtgagagtaatttcattggttcagggagttttggttctgtttacaaaggaattctcataaatgggactatcattgcagttaaagtgttcaacctacaagttgaaggtgcattcaagagttttgaaacagaatgtgaagttcttcgcaaccttcgccataggaatctcaccaaagtcattagcagttgctccaaccttgatttcaaggctttagtgctcgagtacatgcctaatgggagccttgaaaagtggttgtattcacacaactacttcttagacatccttcaaagactaagcataatgattgatgtggcatgtgcattggaatatctccaccatggttgctcagcacctgtgattcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="69209" stop="67923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68904" g_stop="68223" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="690" r_length="682" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U576410" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68904" e_stop="68223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCAGGGTGAAATTCCTTTTAGTGGTCCTTTCAAGAACCTTTCCAGCCTGTCATTCATGTTCAATGAAGCATTGTGTGGTGCTCCAAGATTTCATGTCCCTTCGTGCCCCACTTCTTCAAACCATAGATCAAAGAGGAAGAAGTTACTTCTGATAGTCTTTCCTCTACTCGGAGCTGCTGTGACAATTGTTTTTGTAACATTGGCATTTGTGTGGATGAGGTACAGAAAAGAAGGAAATGTTCCAGTCCAAGCTGATTTGTTAGCTACAAGGGAAAGAATTTCATACTATGAAATCATACAAGCCACAAATGATTTTAGTGAGAGTAATTTCATTGGTTCAGGGAGTTTTGGTTCTGTTTACAAAGGAATTCTCATAAATGGGACTATCATTGCAGTTAAAGTGTTCAACCTACAAGTTGAAGGTGCATTCAAGAGTTTTGAAACAGAATGTGAAGTTCTTCGCAACCTTCGCCATAGGAATCTCACCAAAGTCATTAGCAGTTGCTCCAACCTTGATTTCAAGGCTTTAGTGCTCGAGTACATGCCTAATGGGAGCCTTGAAAAGTGGTTGTATTCACACAACTACTTCTTAGACATCCTTCAAAGACTAAGCATAATGATTGATGTGGCATGTGCATTGGAATATCTCCACCATGGTTGCTCAGCACCTGTGATTCAT</genome_strand>
        <mrna_strand>CTTGCAGGGTGAAATTCCTTTTAGTGGTCCTTTCAAGAACCTTTCCAGCCTGTCATTCATGTTCAATGAAGCATTGTGTGGTGCTCCAAGATTTCATGTCCCTTCGTGCCCCACTTCTTCAAACCATAGATCAAAGAGGAAGAAGTTACTTCTGATAGTCTTTCCTCTACTCGGAGCTGCTGTGACAATTGTTTTTGTAACATTGGCATTTGTGTGGATGAGGTACAGAAAAGAAGGAAATGTTCCAGTCCAAGCTGATTTGTTAGCTACAAGGGAAAGAATTTCATACTATGAAATCATACAAGCCACAAATGATTTTAGTGAGAGTAATTTCATTGGTTCAGGGAGTTTTGGTTCTGTTTACAAAGGAATTCTCATAAATGGGACTATCATTGCAGTTAAAGTGTTCAACCTACAAGTTGAAGGTGCATTCAAGAGTTTTGAAACAGAATGTGAAGTTCTTCGCAACCTTCGCCATAGGAATCTCACCAAAGTCATTAGCAGTTGCTCCAACCTTGATTTCAAGGCTTTAGTGCTCGAGTACATGCCTAATGGGAGCCTTGAAAAGTGGTTGTATTCACACAACTACTTCTTAGACATCCTTCAAAGACTAAGCATAATGATTGATGTGGCATGTGCATTGGAATATCTCCACCATGGTTGCTCAGCACCTGTGATTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564622" ref_strand="+" ref_description="SGN-U564622 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|115459106|ref|NP_001053153.1| (e_value=2e-51) Os04g0488600; (*ATH) AT5G43050.1 (e_value=2e-51) | Symbol: None | expressed protein, contains Pfam profile PF04483: Protein of unknown function (DUF565) | chr5:17285253-17286249 FORWARD | Aliases: MMG4.6, MMG4_6; ">
      <seq>caacagttgctgaatcttcttcatccattctgtattctcttctctttaattgcataaatatcaaatgactcattctctaactttagcttctacagctctaattcgatacggcattggtccaaaaattggggctttacctagggcaaatatgccatcgagatcatcttcaaggttattcagaattcaagctgtgcaagataatgggggagggcctcggaggctaatagatattattcgcaatgttcctgaggtttcgagaaattatttcaaaactccttcacggagggcactctttggaggtatatcattactgggtggattttatgtggcccagacaatttctctatcttttggagctttaggagtgaatgatgtgattgctgctgtagtgtgtgtcttaattactgaatatgtgacgcgattctactacactcgacctaaggtgacttttccgattgctcttttgaacaacttcaagatgggttttacctatggtctgttcattgatgccttcaaacttgccagctgaattgattgccacacttttgtagcagacatctttcatattgagcctctcattaggagattcagctgtgcaattcaatgccaactccaaaatagaggtcagacaactcaactttttatcaaaatcaatctcttcaggttgcaataaggtgtcatcaataatatcagctggtgctacaggacatctttcatattgagcctctcattaggagattcagctgtgcaattcaatgccaactccaaaatagaggtcagacaactcaactttttatcaaaatcaatctcttcaggttgcaataaggtgtcatcaataatatcagctggtgctacaggtagtgaattacagacccaactcctcatgttcaaattttcttgaaacatttcatcgtatggccttttccttgtgaaagtttccatgagcataatgccgtaactgtacacatcacatcttctagaaactaatccaactgatccatactctgattcagtattaccagagtaattagtttcttgatgagccagataaagaaatgaaaatattttacatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="75424" stop="79399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75724" g_stop="76276" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76277" i_stop="77196" i_length="920">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77197" g_stop="77220" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="575" r_length="22" r_score="0.792"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77221" i_stop="77514" i_length="294">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.811" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77515" g_stop="77542" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="600" r_length="25" r_score="0.607"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77543" i_stop="77619" i_length="77">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="77620" g_stop="77649" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="628" r_length="28" r_score="0.633"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="77650" i_stop="77791" i_length="142">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="0.56"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77792" g_stop="77836" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="671" r_length="43" r_score="0.556"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="77837" i_stop="78009" i_length="173">
            <donor d_prob="0.000" d_score="0.56"/>
            <acceptor a_prob="0.870" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="78010" g_stop="78044" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="705" r_length="34" r_score="0.457"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="78045" i_stop="78730" i_length="686">
            <donor d_prob="0.647" d_score="0.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="78731" g_stop="79099" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="1074" r_length="369" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U564622" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1084</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75724" e_stop="76276"/>
          <exon e_start="77197" e_stop="77220"/>
          <exon e_start="77515" e_stop="77542"/>
          <exon e_start="77620" e_stop="77649"/>
          <exon e_start="77792" e_stop="77836"/>
          <exon e_start="78010" e_stop="78044"/>
          <exon e_start="78731" e_stop="79099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAGTTGCTGAATCTTCTTCATCCATTCTGTATTCTCTTCTCTTTAATTGCATAAATATCAAATGACTCATTCTCTAACTTTAGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCAGTAAGTAATTTTTGCGTGCAGTTTCCCCCTTTTGGGCTGTATTTGTGGATATACAAGTCATAGAAATAGCGAAGTTCTTATTTCAACTGTGTTGATGTTGTCTCATCTTTCAGAAAATTGATGTGAGAGTTACTCATTTCTTGTGTCTTGAAATCTTATAATCACCTCGGTTTGCTTACTGTGCTTTGGGAGTTGGTGGAAGTTAAAGCATTTTACTCAGTACAAGTTCAAGAAGTAAAAAGTTCGTTTTTTACCCCTACCTTGAGCTACCACTTGCGAGAGTGCTTACCATTTGAGCAACCACTCTTTCCAAAAAGTAAAAAGTGATGCCAAAATGAAGGTAAATCTTCTTTGAGATATACAAGATGAGCTCTAAAGAGCATCTCTTTTATAGAGAATTGGGTAAAAATTGAAGCAGTAGAATCTTGGAGAGCCTTTAATAGGATTTAATTTTTCTGTCCCAAGAAATGTGAAGAAGGTTAAAATGCCTTCACTACCTGCCACTAATGAAGTGAATTCTAAAATGCCCTGATGGGTTATTTGTAATCCAATTACTATGAAAATAACTATAGAATAACATACTTTTCTTTTTGACAATCAGCATCCATTAAGAAAAAAGATTTTAGGAATAAAGTCACAGAGCCGGGTCTTGAACTTTGATGTCTGAATATCATTTGACTAAAGTTTTAAGTATACTGGATCGTATATAGGGGGGTCCGGCAAGATTTTGCCAAACTTGTGATCTTTCTCAGAGTGTACTGTGTTGTTCAAAGAAATTTTTACAATAAATGGTGAAGATGATCATTCCTGAAGTCAATCAGACTATTTGAATATGGTTGTTTTCTTCTATGGTTGTTTCTTGAGACATCTATGAATCTTCACCGTATGAAAAGTAGTTTTCTTCTATGGTTGTTTCTTGAGACATCTATGAATATTGCAGCCTTGGAGTTCCGAATAACTGGACTAAAGAACTTTTCAATAAGTTGATGATAAACTTGCATCTAGAAGATCGTTGAGATTACAAAGTCTTAATGGTACACTTAAAGTTAAACTATTTGAATCCAAGTAAAACTTTTCTCAGAGAAAATTCAATTTCCAAGCATCCGGGGATTGGACCAAGTATTTGATCTCTTCTCAATACAGTTCACCCTGATTTTGCTACAGACAGAAACTATTAGATGGAGAGTGAAGCTTTGTATTAGTTATGGGATTAATGGAAAGATATCCCTGGGTTTTAGTCATGAGATAAGTGCAGATATTACAAATATACTGGACCACAAAGAGAGTAAAGCTTTTGTATTTGTAGTGTGTGATTATGGTAACTGTCATGCTGTCTTTGTCAGTGAATGGGAACTATTGAAAATTGAAATAAGAAACTTTCCAGCTGTTAAGGAGTCTATATTGGATGAATTAAGAAAGTAAGAAACCTAAGCCAAAGCCAAATGATGTGGAAATGAAGTTGAAATTGTTTCTGAATTCTTATGTATGTTCATTGACTGCTATTTGGTGTTTCAGGCAATGTTGTATTTTTGCCTGAAGTCATTGGATTTGAGTTGCAAAGTTTTATTGATTGAGCGGGTGATCTAAGTTGTTGGAAAAGGACTTTTCGGTCTTTTAGTTTTTTGTCATTCGCCAATTAGAACCCACATTCAACATTTGGGGTTTAAGTCTCAATCCCAATTGTGACCTGTGAGAGTGAAAAATATGGATTGCATTTGTGCTTCAATCTACAGACGAGCTGTTCATTGTAAAAACTTTGTTCGACTTGGTAACTGAAAGAGCCTAAGCTTGTGGTTCAACATTTTACTGCTCTTCATAGATCATTGAAGCTTCTATCTCAATAATAATTCTTGATCACCAATATTTTACTTTTGTACACATCTTATATATCAAAAGTTTTACATAAACATACTCAAACTTGAAACATGCACAAGAGGACGGCACAAGAAATAGGAGAAGTACGAATCTCAGACCAAATGTTTGTTGGCAATTCAATTGATGTCACCCAAATTTGCCAACAACAGGCATAAAAGGTGGCAATACCTGTACAAAAATTTGAATGGCGTCAAACTTGAGTTGGCAGCCATTGCAGATAAAAACTCATAGCACACACAAAAATACACTAATTGTGATGGATACATGAGTTGTTTGCTTCACTTTTCAACATTCATCATAATTTCCAAATGTTGTTCCTCATGAATTCTTGATTTATTTTACTCGCTAATGAAGTTTCCTTGATTTAATTATTATTATTATTTTTATTATTAGTATTTGCATGGAAAAACCCATTTCTACACGGTATAGACAAGACAGTAATCTTTTTATTTCCGAAATGGGAAATAATTTCTCTATATGACATTAGAATGTTTTAAAAAGTTGGATACCTACCGTCGCATAAACCTTATTACATCATCTGCATAGAAATTCATCCTTGATCTTCTTGATATTTGCCAGGACATCTTTCATATTGAGCCTCTCATTAGGAGATTCAGCTGTGCAATTCAATGCCAACTCCAAAATAGAGGTCAGACAACTCAACTTTTTATCAAAATCAATCTCTTCAGGTTGCAATAAGGTGTCATCAATAATATCAGCTGGTGCTACAGGTAGTGAATTACAGACCCAACTCCTCATGTTCAAATTTTCTTGAAACATTTCATCGTATGGCCTTTTCCTTGTGAAAGTTTCCATGAGCATAATGCCGTAACTGTACACATCACATCTTCTAGAAACTAATCCAACTGATCCATACTCTGATTCAGTATTACCAGAGTAATTAGTTTCTTGATGAGCCAGATAAAGAAATGAAAATATTTTACATAT</genome_strand>
        <mrna_strand>CAACAGTTGCTGAATCTTCTTCATCCATTCTGTATTCTCTTCTCTTTAATTGCATAAATATCAAATGACTCATTCTCTAACTTTAGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCT-TTCATATTG-AGCCTC......................................................................................................................................................................................................................................................................................................TCATTAG-GAGATTCAGCT-GTGC-AAT.............................................................................TCAATGCCAAC--TCCAAAATAGAGGTCAG..............................................................................................................................................ACAA-CTCAACTTTTTATC-AAAATCAATCTCTTCAGGTTGCAAT.............................................................................................................................................................................AAGGTGTCATCAATAATATCAGCTGGTGCTAC-AG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTTTCATATTGAGCCTCTCATTAGGAGATTCAGCTGTGCAATTCAATGCCAACTCCAAAATAGAGGTCAGACAACTCAACTTTTTATCAAAATCAATCTCTTCAGGTTGCAATAAGGTGTCATCAATAATATCAGCTGGTGCTACAGGTAGTGAATTACAGACCCAACTCCTCATGTTCAAATTTTCTTGAAACATTTCATCGTATGGCCTTTTCCTTGTGAAAGTTTCCATGAGCATAATGCCGTAACTGTACACATCACATCTTCTAGAAACTAATCCAACTGATCCATACTCTGATTCAGTATTACCAGAGTAATTAGTTTCTTGATGAGCCAGATAAAGAAATGAAAATATTTTACATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586868" ref_strand="+" ref_description="SGN-U586868 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|125548804|gb|EAY94626.1| (e_value=1e-51) hypothetical; (*ATH) AT5G43050.1 (e_value=4e-51) | Symbol: None | expressed protein, contains Pfam profile PF04483: Protein of unknown function (DUF565) | chr5:17285253-17286249 FORWARD | Aliases: MMG4.6, MMG4_6; ">
      <seq>agcttctacagctctaattcgatacggcattggtccaaaaattggggctttacctagggcaaatatgccatcgagatcatcttcaaggttattcagaattcaagctgtgcaagataatgggggagggcctcggaggctaatagatattattcgcaatgttcctgaggtttcgagaaattatttcaaaactccttcacggagggcactctttggaggtatatcattactgggtggattttatgtggcccagacaatttctctatcttttggagctttaggagtgaatgatgtgattgctgctgtagtgtgtgtcttaattactgaatatgtgacgcgattctactacactcgacctaaggtgacttttccgattgctcttttgaacaacttcaagatgggttttacctatggtctgttcattgatgccttcaaacttgccagctgaattgattgccacacttttgtagcagtaagtaatttttgcgtgcagtttcccccttttgggctgtatttgtggatatacaagtcatagaaatagcgaagttcttatttcnactgtgttgatgttgtctcatctttcagaaaattgatgtgagagttactcatttcttgngtcttgaaatcttataatcacctcggtttgcttactgtgctttgggagttggtggaagttaaagcattttactcagtacaagttcaagaantaaaaagttcgttttttaccccnacctngagctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="75508" stop="76848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75808" g_stop="76548" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="741" r_length="741" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U586868" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75808" e_stop="76548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCAGTAAGTAATTTTTGCGTGCAGTTTCCCCCTTTTGGGCTGTATTTGTGGATATACAAGTCATAGAAATAGCGAAGTTCTTATTTCAACTGTGTTGATGTTGTCTCATCTTTCAGAAAATTGATGTGAGAGTTACTCATTTCTTGTGTCTTGAAATCTTATAATCACCTCGGTTTGCTTACTGTGCTTTGGGAGTTGGTGGAAGTTAAAGCATTTTACTCAGTACAAGTTCAAGAAGTAAAAAGTTCGTTTTTTACCCCTACCTTGAGCTACCA</genome_strand>
        <mrna_strand>AGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCAGTAAGTAATTTTTGCGTGCAGTTTCCCCCTTTTGGGCTGTATTTGTGGATATACAAGTCATAGAAATAGCGAAGTTCTTATTTCNACTGTGTTGATGTTGTCTCATCTTTCAGAAAATTGATGTGAGAGTTACTCATTTCTTGNGTCTTGAAATCTTATAATCACCTCGGTTTGCTTACTGTGCTTTGGGAGTTGGTGGAAGTTAAAGCATTTTACTCAGTACAAGTTCAAGAANTAAAAAGTTCGTTTTTTACCCCNACCTNGAGCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600153" ref_strand="+" ref_description="SGN-U600153 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>accttgggggaaataaattgcgaggcacaattccagcaaatattggtaatttacgaaagttgcagcaactacaattggagaacaattacatggtgggttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="82654" stop="81782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82354" g_stop="82331" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82330" i_stop="82158" i_length="173">
            <donor d_prob="0.980" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82157" g_stop="82082" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="100" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U600153" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>100</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82354" e_stop="82331"/>
          <exon e_start="82157" e_stop="82082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTGGGGGAAATAAATTGCGAGGTGCATTAATTCTTCAGACTTAAATTTCTCAATCTGAACTTTGCATATGTAAGCTCACAAGATATAAATAGAACTAATAACTCTTTACTAAGATTATAAAAAATTAAAAATCAAAGTATGCTAATTGAGAATATTTGACACCTCATAAAAGTTTGTCAAAATATAATTTGCAGGCACAATTCCAGCAAATATTGGTAATTTACGAAAGTTGCAGCAACTACAATTGGAGAACAATTACATGGTGGGTTC</genome_strand>
        <mrna_strand>ACCTTGGGGGAAATAAATTGCGAG.............................................................................................................................................................................GCACAATTCCAGCAAATATTGGTAATTTACGAAAGTTGCAGCAACTACAATTGGAGAACAATTACATGGTGGGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576513" ref_strand="+" ref_description="SGN-U576513 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>agagcaaaaaaagttgcattagcaattggaaattccaccattgtgacaaatgcacattaaactggctagttttcttactacagatagcaactcaaaagtacatattttggaccataatgaggccaattgctaaacattaaaatttctaatttcatgctagattcgataccggactatcataggaatgtttatggaacagtagagacaaggaaaagtagaatataatatgttggaattgctacatttacttcagttcaatcttgctcttactggatttgaatccttcctcttccttttcagttgattgccgacacgcctgaaccccttaattgataaaaggacctgagtatagttggtaagggaaaggagacatctagagcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="103427" stop="104396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103727" g_stop="104081" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U576513" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103727" e_stop="104081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGCAAAAAAAGTTGCATTAGCAATTGGAAATTCCACCATTGTGACAAATGCACATTAAACTGGCTAGTTTTCTTACTACAGATAGCAACTCAAAAGTACATATTTTGGACCATAATGAGGCCAATTGCTAAACATTAAAATTTCTAATTTCATGCTAGATTCGATACCGGACTATCATAGGAATGTTTATGGAACAGTAGAGACAAGGAAAAGTAGAATATAATATGTTGGAATTGCTACATTTACTTCAGTTCAATCTTGCTCTTACTGGATTTGAATCCTTCCTCTTCCTTTTCAGTTGATTGCCGACACGCCTGAACCCCTTAATTGATACAAGGCTCTGAGTATAGTTG</genome_strand>
        <mrna_strand>AGAGCAAAAAAAGTTGCATTAGCAATTGGAAATTCCACCATTGTGACAAATGCACATTAAACTGGCTAGTTTTCTTACTACAGATAGCAACTCAAAAGTACATATTTTGGACCATAATGAGGCCAATTGCTAAACATTAAAATTTCTAATTTCATGCTAGATTCGATACCGGACTATCATAGGAATGTTTATGGAACAGTAGAGACAAGGAAAAGTAGAATATAATATGTTGGAATTGCTACATTTACTTCAGTTCAATCTTGCTCTTACTGGATTTGAATCCTTCCTCTTCCTTTTCAGTTGATTGCCGACACGCCTGAACCCCTTAATTGATAAAAGGACCTGAGTATAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582263" ref_strand="+" ref_description="SGN-U582263 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>catcaacacagcccttgaatttggtgaatgaagagtatgtaagcaatgcaaatgacccatgatagttggtgaccacaaaattttgaaatgcagttatcacttcttccgggaaagctattatgaagaactcctctatactccaaacaaacgaggcaagaacaaaatttccatccaagtcctgtgcaatccagcaaggtcgtcattgtgtacagggaacatcttgtactgctctatggcagggttccatatgcaaatcattcgaccggaagcaatagtagtaactaaacagatcaagccattgattgaacctatgacagtataatcggtcgtacagggttcattaagctttatcaagttgccaggattttgtatatggatcaaacgatttatctccccagtctgaacaaagatacaatggttatcagggattgaactaaacctcttgctatacagattgataaaccaggggcttgaaatcagcatggaatagtccttatataagcacttcaatcgcatcagagttttgactggtaatcttgaaaaaataaccccaagaatctcatcgttaagacccggaataccaccggtaattcgtcttgcattattcatcttataaggaaaatggagattctatttctggttgagacaatcaatcaaacagttttgaatgcagaaagtagagtatatttcgcccaaatctaactaaaaatcttcaagaaattgctgtgattgaagcactcaccttgagaatcatgagaggcagaaatccaaaacccaaagaagaagaaacactcaacacactctctctccagtggaaacgattatttttaactgattttttgcttctcaactgatctttctctttatttataggggcaggagacgtttttgacatggaaagccaactaagaatttctgtggattagtatatataaattctatatttacatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="110432" stop="112201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110732" g_stop="110925" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110926" i_stop="111142" i_length="217">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111143" g_stop="111901" g_length="759"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="953" r_length="759" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U582263" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>953</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110732" e_stop="110925"/>
          <exon e_start="111143" e_stop="111901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAACACAGCCCTTGAATTTGGTGAATGAAGAGTATGTAAGCAATGCAAATGACCCATGATAGTTGGTGACCACAAAATTTTGAAATGCAGTTATCACTTCTTCCGGGAAAGCTATTATGAAGAACTCCTCTATACTCCAAACAAACGAGGCAAGAACAAAATTTCCATCCAAGTCCTGTGCAATCCAGCAAGTAAGCCCTTCAATAATTACATCACAGAAGTCACTAATCATTCTTAAGTGACGATTAGACTTCACTTCTTTCCAACACTCCGAATTGGTTGAGTAAATCTCAAGTATAGTCAACGGCCCACCTTTTTTATAGCTTAGAATCCTCATGACCTTGTAATCATCAGAATCTTTATCATATCCAAAGCCCATACCAATATAACATTTGCGTGTCTTTTCAGGGTCGTCATTGTGTACAGGGAACATCTTGTACTGCTCTATGGCAGGGTTCCATATGCAAATCATTCGACCGGAAGCAATAGTAGTAACTAAACAGATCAAGCCATTGATTGAACCTATGACAGTATAATCGGTCGTACAGGGTTCATTAAGCTTTATCAAGTTGCCAGGATTTTGTATATGGATCAAACGATTTATCTCCCCAGTCTGAACAAAGATACAATGGTTATCAGGGATTGAACTAAACCTCTTGCTATACAGATTGATAAACCAGGGGCTTGAAATCAGCATGGAATAGTCCTTATATAAGCACTTCAATCGCATCAGAGTTTTGACTGGTAATCTTGAAAAAATAACCCCAAGAATCTCATCGTTAAGACCCGGAATACCACCGGTAATTCGTCTTGCATTATTCATCTTATAAGGAAAATGGAGATTCTATTTCTGGTTGAGACAATCAATCAAACAGTTTTGAATGCAGAAAGTAGAGTATATTTCGCCCAAATCTAACTAAAAATCTTCAAGAAATTGCTGTGATTGAAGCACTCACCTTGAGAATCATGAGAGGCAGAAATCCAAAACCCAAAGAAGAAGAAACACTCAACACACTCTCTCTCCAGTGGAAACGATTATTTTTAACTGATTTTTTGCTTCTCAACTGATCTTTCTCTTTATTTATAGGGGCAGGAGACGTTTTTGACATGGAAAGCCAACTAAGCATTTCTGTGGATTAGTATATATAAATTCTATATTTACATCTT</genome_strand>
        <mrna_strand>CATCAACACAGCCCTTGAATTTGGTGAATGAAGAGTATGTAAGCAATGCAAATGACCCATGATAGTTGGTGACCACAAAATTTTGAAATGCAGTTATCACTTCTTCCGGGAAAGCTATTATGAAGAACTCCTCTATACTCCAAACAAACGAGGCAAGAACAAAATTTCCATCCAAGTCCTGTGCAATCCAGCAA.........................................................................................................................................................................................................................GGTCGTCATTGTGTACAGGGAACATCTTGTACTGCTCTATGGCAGGGTTCCATATGCAAATCATTCGACCGGAAGCAATAGTAGTAACTAAACAGATCAAGCCATTGATTGAACCTATGACAGTATAATCGGTCGTACAGGGTTCATTAAGCTTTATCAAGTTGCCAGGATTTTGTATATGGATCAAACGATTTATCTCCCCAGTCTGAACAAAGATACAATGGTTATCAGGGATTGAACTAAACCTCTTGCTATACAGATTGATAAACCAGGGGCTTGAAATCAGCATGGAATAGTCCTTATATAAGCACTTCAATCGCATCAGAGTTTTGACTGGTAATCTTGAAAAAATAACCCCAAGAATCTCATCGTTAAGACCCGGAATACCACCGGTAATTCGTCTTGCATTATTCATCTTATAAGGAAAATGGAGATTCTATTTCTGGTTGAGACAATCAATCAAACAGTTTTGAATGCAGAAAGTAGAGTATATTTCGCCCAAATCTAACTAAAAATCTTCAAGAAATTGCTGTGATTGAAGCACTCACCTTGAGAATCATGAGAGGCAGAAATCCAAAACCCAAAGAAGAAGAAACACTCAACACACTCTCTCTCCAGTGGAAACGATTATTTTTAACTGATTTTTTGCTTCTCAACTGATCTTTCTCTTTATTTATAGGGGCAGGAGACGTTTTTGACATGGAAAGCCAACTAAGAATTTCTGTGGATTAGTATATATAAATTCTATATTTACATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600873" ref_strand="+" ref_description="SGN-U600873 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147853795|emb|CAN81714.1| (e_value=2e-52) hypothetical; (*ATH) AT5G20480.1 (e_value=4e-36) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative, protein kinase Xa21, Oryza sativa, PIR:A57676 | chr5:6922484-6925877 FORWARD | Aliases: F7C8.70, F7C8_70; (*SWP) sp|Q9ZPS9|BRL2_ARATH (e_value=6e-30) Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1; ">
      <seq>caggcctgatgggcgtacttccagatgaaatcggtaaccttcaagagttgttgatgctgaagttggatttcaatgactttagtgggtcgatccctgttggtatatttaatggctcaactcttgtatctattacactcacacaaaaccgcatttcaggtaatcttcccaacactataggcagggggtcacccaatcttgaacgaatttttctaggtgcaaataacattgatggtcttttacctagttccatttcaaatttgtctaagcttactgtactcgaacttagtgcaaatgcactcacaggttcaattcctgactttctaggaaacttaggacttattgaaattctcaacttgcaaggtaacttcttcactagtgactcttcaatgttgagttttattactcctttggccaattgtaaacacttaagagaactgatattgtctatcaatcccctaaatgcaatacttccaaaatccatagggaatctttcttctcttcagacgtttgaggcaataggttgtaatctcaaaggccatattccaaatgaaattggaaatttgagaaatttatcttatttgaagctggataaaaatgactttactggaattgtcccgacgacaataagttctttggaaaaacttcaacagttttcacttggtacaaacagaataagtggtcctttcccaattgttgtatgtgagctacccaacttgggcttgctaaacctttcacaaaacaaatgtggggaaatattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="116901" stop="118249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117106" g_stop="117117" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117118" i_stop="117201" i_length="84">
            <donor d_prob="0.728" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117202" g_stop="117949" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="760" r_length="748" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U600873" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117106" e_stop="117117"/>
          <exon e_start="117202" e_stop="117949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCCTGATGGGTATGGAATAATATGTAACCACATGATTTCAGAATGTTAGTTCTTTCAATATTTCGTCTAATGTAATCTTACTTCTTTCTGCAGGCGTACTTCCAGATGAAATCGGTAACCTTCAAGAGTTGTTGATGCTGAAGTTGGATTTCAATGACTTTAGTGGGTCGATCCCTGTTGGTATATTTAATGGCTCAACTCTTGTATCTATTACACTCACACAAAACCGCATTTCAGGTAATCTTCCCAACACTATAGGCAGGGGGTCACCCAATCTTGAACGAATTTTTCTAGGTGCAAATAACATTGATGGTCTTTTACCTAGTTCCATTTCAAATTTGTCTAAGCTTACTGTACTCGAACTTAGTGCAAATGCACTCACAGGTTCAATTCCTGACTTTCTAGGAAACTTAGGACTTATTGAAATTCTCAACTTGCAAGGTAACTTCTTCACTAGTGACTCTTCAATGTTGAGTTTTATTACTCCTTTGGCCAATTGTAAACACTTAAGAGAACTGATATTGTCTATCAATCCCCTAAATGCAATACTTCCAAAATCCATAGGGAATCTTTCTTCTCTTCAGACGTTTGAGGCAATAGGTTGTAATCTCAAAGGCCATATTCCAAATGAAATTGGAAATTTGAGAAATTTATCTTATTTGAAGCTGGATAAAAATGACTTTACTGGAATTGTCCCGACGACAATAAGTTCTTTGG-AAAACTTCAACAGTTTTCACTTGGTACAAACAGAATAAGTGGTCCTTTCCCAATTGTTGTATGTGAGCTACCCAACTTGGGCTTGCTAAACCTTTCACAAAACCAAATGTGGGGAAATATTCCT</genome_strand>
        <mrna_strand>CAGGCCTGATGG....................................................................................GCGTACTTCCAGATGAAATCGGTAACCTTCAAGAGTTGTTGATGCTGAAGTTGGATTTCAATGACTTTAGTGGGTCGATCCCTGTTGGTATATTTAATGGCTCAACTCTTGTATCTATTACACTCACACAAAACCGCATTTCAGGTAATCTTCCCAACACTATAGGCAGGGGGTCACCCAATCTTGAACGAATTTTTCTAGGTGCAAATAACATTGATGGTCTTTTACCTAGTTCCATTTCAAATTTGTCTAAGCTTACTGTACTCGAACTTAGTGCAAATGCACTCACAGGTTCAATTCCTGACTTTCTAGGAAACTTAGGACTTATTGAAATTCTCAACTTGCAAGGTAACTTCTTCACTAGTGACTCTTCAATGTTGAGTTTTATTACTCCTTTGGCCAATTGTAAACACTTAAGAGAACTGATATTGTCTATCAATCCCCTAAATGCAATACTTCCAAAATCCATAGGGAATCTTTCTTCTCTTCAGACGTTTGAGGCAATAGGTTGTAATCTCAAAGGCCATATTCCAAATGAAATTGGAAATTTGAGAAATTTATCTTATTTGAAGCTGGATAAAAATGACTTTACTGGAATTGTCCCGACGACAATAAGTTCTTTGGAAAAACTTCAACAGTTTTCACTTGGTACAAACAGAATAAGTGGTCCTTTCCCAATTGTTGTATGTGAGCTACCCAACTTGGGCTTGCTAAACCTTTCACAAAA-CAAATGTGGGGAAATATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598995" ref_strand="+" ref_description="SGN-U598995 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157344515|emb|CAO69898.1| (e_value=2e-29) unnamed; (*ATH) AT3G47090.1 (e_value=2e-20) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative, receptor kinase-like protein (Xa21), Oryza longistaminata, U72725 | chr3:17352497-17355630 REVERSE | Aliases: F13I12.140; (*SWP) sp|Q8GXQ3|WAKLF_ARATH (e_value=2e-15) Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6; ">
      <seq>cactcaagcaactacactcctttaatgtctcattcaacaggttacacggggaaatcccgagtggtggaccttttcttaatctcccttaccagtctttcttgtcgaatgaaggattgtgtggtaatcctcaaaagcatgtcccagcttgtcgttcaaattcaaagaatcattccaattcaaagaaacgaagaataatatggattgtagttgtctcttcagttatctctattatagggcttgcttcagcaataattttcgtgttaatgcgacgtcagggtaaagtaatcaaagctgaagatgagtggtctcctgaggtagcaccacagagattttcttactatgaaacttcaaagagcaactcaggggtttgatgaaaataacttgctaggtagtggaggttttggttctgtttttaaagggacgttggcagatgggatgatactagctgtcaaagtttttaatgtgcagatggaaggtacatttcaaacctttgatagagaatgtgaaatcttgaggaatcttcgtcacagaaatctcacaaagatcattagcagctgttgtaacttggattttaaagcattggtacttgagtacatgccaaatgggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="+" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="118023" stop="119230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118323" g_stop="118930" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="+" ref_id="SGN-U598995" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598995" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118323" e_stop="118930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCAAGCAACTACACTCCTTTAATGTCTCATTCAACAGGTTACACGGGGAAATCCCGAGTGGTGGACCTTTTCTTAATCTCCCTTACCAGTCTTTCTTGTCGAATGAAGGATTGTGTGGTAATCCTCAAAAGCATGTCCCAGCTTGTCGTTCAAATTCAAAGAATCATTCCAATTCAAAGAAACGAAGAATAATATGGATTGTAGTTGTCTCTTCAGTTATCTCTATTATAGGGCTTGCTTCAGCAATAATTTTCGTGTTAATGCGACGTCAGGGTAAAGTAATCAAAGCTGAAGATGAGTGGTCTCCTGAGGTAGCACCACAGAGATTTTCTTACTATG-AACTTCAAAGAGCAACTCAGGGGTTTGATGAAAATAACTTGCTAGGTAGTGGAGGTTTTGGTTCTGTTTTTAAAGGGACGTTGGCAGATGGGATGATACTAGCTGTCAAAGTTTTTAATGTGCAGATGGAAGGTACATTTCAAACCTTTGATAGAGAATGTGAAATCTTGAGGAATCTTCGTCACAGAAATCTCACAAAGATCATTAGCAGCTGTTGTAACTTGGATTTTAAAGCATTGGTACTTGAGTACATGCCAAATGGGAGC</genome_strand>
        <mrna_strand>CACTCAAGCAACTACACTCCTTTAATGTCTCATTCAACAGGTTACACGGGGAAATCCCGAGTGGTGGACCTTTTCTTAATCTCCCTTACCAGTCTTTCTTGTCGAATGAAGGATTGTGTGGTAATCCTCAAAAGCATGTCCCAGCTTGTCGTTCAAATTCAAAGAATCATTCCAATTCAAAGAAACGAAGAATAATATGGATTGTAGTTGTCTCTTCAGTTATCTCTATTATAGGGCTTGCTTCAGCAATAATTTTCGTGTTAATGCGACGTCAGGGTAAAGTAATCAAAGCTGAAGATGAGTGGTCTCCTGAGGTAGCACCACAGAGATTTTCTTACTATGAAACTTCAAAGAGCAACTCAGGGGTTTGATGAAAATAACTTGCTAGGTAGTGGAGGTTTTGGTTCTGTTTTTAAAGGGACGTTGGCAGATGGGATGATACTAGCTGTCAAAGTTTTTAATGTGCAGATGGAAGGTACATTTCAAACCTTTGATAGAGAATGTGAAATCTTGAGGAATCTTCGTCACAGAAATCTCACAAAGATCATTAGCAGCTGTTGTAACTTGGATTTTAAAGCATTGGTACTTGAGTACATGCCAAATGGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574516" ref_strand="+" ref_description="SGN-U574516 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157354717|emb|CAO48035.1| (e_value=6e-107) unnamed; (*ATH) AT5G45780.1 (e_value=1e-103) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18584173-18586852 REVERSE | Aliases: MRA19.22, MRA19_22; (*SWP) sp|Q94F62|BAK1_ARATH (e_value=5e-80) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1; ">
      <seq>gcttgtttgttgggtgcattggtacagatctcgtgtcctcacaggatatgtgcaacacgattgtgagttcgctgctggccacctgaagagattttcatttcgtgaactgcaaattgcaactgcaaatttcagctctaagaacatactaggacaaggtggatttggagtggtctacaaaggataccttccaaataggacagtagtggctgtcaaaagattgagagatccaactttcactggagaagtgcagtttcaaacagaagttgagatgataggcttggctgtgcatcggaaccttctacgtctgtatggattctgtacgactcccgaggaaagattacttatttacccttatatgccaaatgggagcgttgccgattgcttgagagacaatggacgggataaaccgtttttggattggagaaagcgcatgcatatagctcttggagctgccagaggtcttctgtatttgcatgaacagtgtaatcctaaaataattcacagagatgttaaggcagctaatattctgcttgatgaaagttttgaagctgttgttggtgattttggtcttgctaagcttttagactgtagagattcacatgttacaactgcagttcgtggtactataggtcatatagccccagagtatctatcaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="137139" stop="135079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136840" g_stop="136791" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136790" i_stop="136706" i_length="85">
            <donor d_prob="0.857" d_score="0.98"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136705" g_stop="136367" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="389" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136366" i_stop="135649" i_length="718">
            <donor d_prob="0.847" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="135648" g_stop="135379" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="659" r_length="270" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U574516" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136840" e_stop="136791"/>
          <exon e_start="136705" e_stop="136367"/>
          <exon e_start="135648" e_stop="135379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGTTTGTTGGGTGCATTGGTACAGATCTCGTGTCCTCACAGGATATGGTAATTACAAGATTGGAAACACATCTCTGATTTCTTGCACATTAAGACTAGATACATTTTGAGTCTCTGATCATTTTATCTGCAGTGCAACACGATTGTGAGTTCGCTGCTGGCCACCTGAAGAGATTTTCATTTCGTGAACTGCAAATTGCAACTGCAAATTTCAGCTCTAAGAACATACTAGGACAAGGTGGATTTGGAGTGGTCTACAAAGGATACCTTCCAAATAGGACAGTAGTGGCTGTCAAAAGATTGAGAGATCCAACTTTCACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAGATGATAGGCTTGGCTGTGCATCGGAACCTTCTACGTCTGTATGGATTCTGTACGACTCCCGAGGAAAGATTACTTATTTACCCTTATATGCCAAATGGGAGCGTTGCCGATTGCTTGAGAGGTTTGCTTTGAAGTATATTTGCTTGGTGCTTTTGCTGAAGCATTCTTTTTTCTTGTCACAATGGAATGCTTAACTGATCAAGTCTAACATATGCATTTCAATTATTCCTAGTGCTCTCAATGTTAATCTGGCAAAAACTATTGAAAGGTCATGGTTTATGGAAATCCAGGACTTTGTGCTATATTTTAACTGTACATCTTAAACACCTCAACTTTTGATTGATTATCTGAGATAGTTAGATTGGATTTCCATTGTCAATGTTTCTTGTGAAAGTGGAATGAAATCTATTATCAACATATTCAATCAACAATGCATCAAACCCAAATTAGTTGGGGTTGACTATATGATTTTTTTTGTATCCATTGCAATTAAGACTCCTGATGTAGTGCATTACCTAAGTAGGCATGCCTCTAGCAATCTATTGCCACCTTACGTGTTATTAAGCTTAATTTTTCTGTGACAGTTTCTATCCACCTTCTGAAACGCTAATGTCAATTATGGTATCAACTTACAATATACATGAACAAAATAAATTGTTATTTGGCAGTAAGGTAACAGTCGTGTTGTCATTAACTTTTAGCATGACCAATTCAAGTCAATTTTTAGGTGTATGAACACAAAATCAAGTTGGAATTATTGGAACGCAAACACGTTAGCTTGATGTAGTGACTGTGTCATCTTTTGCTCTGTTCTCACATAATCTTTTGTTATTTACCAGACAATGGACGGGATAAACCGTTTTTGGATTGGAGAAAGCGCATGCATATAGCTCTTGGAGCTGCCAGAGGTCTTCTGTATTTGCATGAACAGTGTAATCCTAAAATAATTCACAGAGATGTTAAGGCAGCTAATATTCTGCTTGATGAAAGTTTTGAAGCTGTTGTTGGTGATTTTGGTCTTGCTAAGCTTTTAGACTGTAGAGATTCACATGTTACAACTGCAGTTCGTGGTACTATAGGTCATATAGCCCCAGAGTATCTATCAACTG</genome_strand>
        <mrna_strand>GCTTGTTTGTTGGGTGCATTGGTACAGATCTCGTGTCCTCACAGGATATG.....................................................................................TGCAACACGATTGTGAGTTCGCTGCTGGCCACCTGAAGAGATTTTCATTTCGTGAACTGCAAATTGCAACTGCAAATTTCAGCTCTAAGAACATACTAGGACAAGGTGGATTTGGAGTGGTCTACAAAGGATACCTTCCAAATAGGACAGTAGTGGCTGTCAAAAGATTGAGAGATCCAACTTTCACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAGATGATAGGCTTGGCTGTGCATCGGAACCTTCTACGTCTGTATGGATTCTGTACGACTCCCGAGGAAAGATTACTTATTTACCCTTATATGCCAAATGGGAGCGTTGCCGATTGCTTGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGGACGGGATAAACCGTTTTTGGATTGGAGAAAGCGCATGCATATAGCTCTTGGAGCTGCCAGAGGTCTTCTGTATTTGCATGAACAGTGTAATCCTAAAATAATTCACAGAGATGTTAAGGCAGCTAATATTCTGCTTGATGAAAGTTTTGAAGCTGTTGTTGGTGATTTTGGTCTTGCTAAGCTTTTAGACTGTAGAGATTCACATGTTACAACTGCAGTTCGTGGTACTATAGGTCATATAGCCCCAGAGTATCTATCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599615" ref_strand="+" ref_description="SGN-U599615 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|188509982|gb|ACD56664.1| (e_value=3e-49) putative; (*ATH) AT5G45780.1 (e_value=1e-50) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18584173-18586852 REVERSE | Aliases: MRA19.22, MRA19_22; (*SWP) sp|Q94F62|BAK1_ARATH (e_value=2e-19) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1; ">
      <seq>gcaatgatgaattctaaaaaggacctttttctgaaagctctgcaccaaaatctttcttttgggtaattagctttttggatccaaatggtaactttgctactcgttttctcatttcttcattgggtggccactactccagtttccatgggttttctttcacctaaaggtgtcaactatgaagtggcagcattgatgtctatgaagaataaaatgagagatgaatatcatgtgttagatggatgggatataaattctgttgatccttgtacatggtacatggttggttgttcttcagaaggctttgttatttctcttgaaatggcgagtatgggattatctggcacactttcgcctagtattgggaatttaactcatcttcggacgatgttgttgcagaataatcatttatctggtccgattcctgctgaaattggacagctcactgaactgctgacccttgatttgtctggtaatcagtttgatggaggaattcctagggcgttgggtcgcctggtttatttaaattacttgaggcttagcaggaacagattgtctggtcaaattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0111M05-Zfmzr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0111M05.1" temp_strand="-" temp_description="C02HBa0111M05.1  AC226506.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0111M05 sequenced_by:kribb upload_account_name:korea">
        <position start="139596" stop="137737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139297" g_stop="139117" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139116" i_stop="138843" i_length="274">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138842" g_stop="138710" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="314" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="138709" i_stop="138614" i_length="96">
            <donor d_prob="0.734" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138613" g_stop="138542" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="386" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="138541" i_stop="138320" i_length="222">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="138319" g_stop="138176" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="530" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="138175" i_stop="138074" i_length="102">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="138073" g_stop="138037" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="567" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0111M05.1" gen_strand="-" ref_id="SGN-U599615" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0111M05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139297" e_stop="139117"/>
          <exon e_start="138842" e_stop="138710"/>
          <exon e_start="138613" e_stop="138542"/>
          <exon e_start="138319" e_stop="138176"/>
          <exon e_start="138073" e_stop="138037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATGATGAATTCTAAAAAGGACCTTTTTCTGAAAGCTCTGCACCAAAATCTTTCTTTTGGGTAATTAGCTTTTTGGATCCAAATGGTAACTTTGCTACTCGTTTTCTCATTTCTTCATTGGGTGGCCACTACTCCAGTTTCCATGGGTTTTCTTTCACCTAAAGGTGTCAACTATGAAGGTAAAGATTAAAACTTTACTATAATCCAACCATTTCTTGTTTTTCTTTTTGCTGTTAAAAATCCAAATTTTGTTGATTACCACTATTTTAAGCATATGTTTATTTTTGTTTTCATAGTTTAGAGTGGTAAAAGATTAAAACTTTACTAGAAAAATCCAAACTTTGTTGCTTAGCATTGTTTATAAGCATTTATTTATTTATGTTTTCATAGTTTAGAGTGGTAAAGATTGAAACTTTACTTAAAGATTTGTTAAATTTATTGTGGGGTAAGCAGTGGCAGCATTGATGTCTATGAAGAATAAAATGAGAGATGAATATCATGTGTTAGATGGATGGGATATAAATTCTGTTGATCCTTGTACATGGTACATGGTTGGTTGTTCTTCAGAAGGCTTTGTTATTTCTCTGTGAGTTTTCTCCTTTTCTGTTACATTTTGTCCATTTGTTTTCCCTTACTGTGGAAATAATTTGTTATTATGCTTTGGTTATATAATTCTTGGCAGTGAAATGGCGAGTATGGGATTATCTGGCACACTTTCGCCTAGTATTGGGAATTTAACTCATCTTCGGACGATGTAAGACTAATTTGACATGAATTTCCCACTTTATTCTTATTTTGATGTGATGCTGCTCACATATATCTTGGAGATACTTGAAGTTAAAATCACATAGTACTTAGTTTAGTAATTACTAATACTGTTAGGAGTCACATTAAGTGCTTTATTATTTGTAAGATATATTGAAAAATATCTTTTAATATGATTGATAAAGTCATTTTTGTATTGGTTTTATTGTAGGTTGTTGCAGAATAATCATTTATCTGGTCCGATTCCTGCTGAAATTGGACAGCTCACTGAACTGCTGACCCTTGATTTGTCTGGTAATCAGTTTGATGGAGGAATTCCTAGGGCGTTGGGTCGCCTGGTTTATTTAAATTACTTGTGAGTGTAGCTAAACTCTTGATTTGTTCTATCTTTATTACTCGTATGTTACAGTTCCCTTGTTGGCTGTGTATGTAATCCTCTGGTGTGTCAAATTCTCAGGAGGCTTAGCAGGAACAGATTGTCTGGTCAAATTCCT</genome_strand>
        <mrna_strand>GCAATGATGAATTCTAAAAAGGACCTTTTTCTGAAAGCTCTGCACCAAAATCTTTCTTTTGGGTAATTAGCTTTTTGGATCCAAATGGTAACTTTGCTACTCGTTTTCTCATTTCTTCATTGGGTGGCCACTACTCCAGTTTCCATGGGTTTTCTTTCACCTAAAGGTGTCAACTATGAAG..................................................................................................................................................................................................................................................................................TGGCAGCATTGATGTCTATGAAGAATAAAATGAGAGATGAATATCATGTGTTAGATGGATGGGATATAAATTCTGTTGATCCTTGTACATGGTACATGGTTGGTTGTTCTTCAGAAGGCTTTGTTATTTCTCT................................................................................................TGAAATGGCGAGTATGGGATTATCTGGCACACTTTCGCCTAGTATTGGGAATTTAACTCATCTTCGGACGAT..............................................................................................................................................................................................................................GTTGTTGCAGAATAATCATTTATCTGGTCCGATTCCTGCTGAAATTGGACAGCTCACTGAACTGCTGACCCTTGATTTGTCTGGTAATCAGTTTGATGGAGGAATTCCTAGGGCGTTGGGTCGCCTGGTTTATTTAAATTACTT......................................................................................................GAGGCTTAGCAGGAACAGATTGTCTGGTCAAATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>25</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2081" PGL_stop="1138"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2081" e_stop="1138"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="2081" e_stop="1138" e_length="944"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2081" stop="1138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563736" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATGGCTTTATATTGAGGGTGCACTAACTTTAACCAGAAAAATTCACCCATACATGTTTTTTTTTTCCTTCCCATTTATTATCATAAAAAAAAATAATTAAAAAGAAGTAGATTGATTACTACTGTTTATGCTGCTGATCCCTCTTCTCTCCCCATTGTTGCACACAAAACCTCATTTTCTTAGCTGCTGTTAAGTACTCCACCGCTTGAACCGGTTCAAGTAGGTTCACTATTGCCTTCAACGTTTTCATCCTCAGTCGATCACCTTCTTCAATAACATCCGCCATGTGTCTACTATGTTCATCCAAAGCTTCATCCGCTTTCTCACAACCATGTCCCTCTTTTTTCATCTTCCCCACAAGCCGTTGATCCGCTATGTCCTCTTGTAAACTAGCAAATTTATTCGAAATCCTCCTCTCTTCTGCAATCGTCTTGCTTTGCAAATCGTTAACCATGCTCAACTGTTTCCCACTTAGTTCGCGGAGCTTCCTGCTTACGATCCCCTCAAGACACGGATCAGTTTCGTTGGCGTCAGGTTCAAATTCGGTGAGGGCATAATGAGTCGAATGAAAGAAGAAGGTCTACAGCCAGCGATCCATAGGACCGAACTCTCCGAGGAAGAGCACGAGGCGGGGGCGAAGAATGGGGACACGTCTTTTCGGGCTAGATGGAGACGCTTCTCAGAGTGCTCTTGGAAGTGTTTTATGATTTTTTCTATCAGTTGTCTCAGTTTTTCTTCATCTTTTTCATTGTTATTGACATGACCTACAGCATGTTCAAGTTCCGTCAGTTCTTCGTGTTGAAGACTCTTCCAAGCACACTCTGCGTATTCTTCTTCCTTGCGATCACTGCTGTTTGAATCAGTTGCCATTAATTTTTTCTTATTAGTTTTTTCAATATATGATAATTTATTAACAAGTATGTTTGTCTGCTGCTTCAGTGT</gDNA_template>
            <first_frame> T  W  L  Y  I  E  G  A  L  T  L  T  R  K  I  H  P  Y  M  F  F  F  S  F  P  F  I  I  I  K  K  N  N  *  K  E  V  D  *  L  L  L  F  M  L  L  I  P  L  L  S  P  L  L  H  T  K  P  H  F  L  S  C  C  *  V  L  H  R  L  N  R  F  K  *  V  H  Y  C  L  Q  R  F  H  P  Q  S  I  T  F  F  N  N  I  R  H  V  S  T  M  F  I  Q  S  F  I  R  F  L  T  T  M  S  L  F  F  H  L  P  H  K  P  L  I  R  Y  V  L  L  *  T  S  K  F  I  R  N  P  P  L  F  C  N  R  L  A  L  Q  I  V  N  H  A  Q  L  F  P  T  *  F  A  E  L  P  A  Y  D  P  L  K  T  R  I  S  F  V  G  V  R  F  K  F  G  E  G  I  M  S  R  M  K  E  E  G  L  Q  P  A  I  H  R  T  E  L  S  E  E  E  H  E  A  G  A  K  N  G  D  T  S  F  R  A  R  W  R  R  F  S  E  C  S  W  K  C  F  M  I  F  S  I  S  C  L  S  F  S  S  S  F  S  L  L  L  T  *  P  T  A  C  S  S  S  V  S  S  S  C  *  R  L  F  Q  A  H  S  A  Y  S  S  S  L  R  S  L  L  F  E  S  V  A  I  N  F  F  L  L  V  F  S  I  Y  D  N  L  L  T  S  M  F  V  C  C  F  S   </first_frame>
            <second_frame>  H  G  F  I  L  R  V  H  *  L  *  P  E  K  F  T  H  T  C  F  F  F  P  S  H  L  L  S  *  K  K  I  I  K  K  K  *  I  D  Y  Y  C  L  C  C  *  S  L  F  S  P  H  C  C  T  Q  N  L  I  F  L  A  A  V  K  Y  S  T  A  *  T  G  S  S  R  F  T  I  A  F  N  V  F  I  L  S  R  S  P  S  S  I  T  S  A  M  C  L  L  C  S  S  K  A  S  S  A  F  S  Q  P  C  P  S  F  F  I  F  P  T  S  R  *  S  A  M  S  S  C  K  L  A  N  L  F  E  I  L  L  S  S  A  I  V  L  L  C  K  S  L  T  M  L  N  C  F  P  L  S  S  R  S  F  L  L  T  I  P  S  R  H  G  S  V  S  L  A  S  G  S  N  S  V  R  A  *  *  V  E  *  K  K  K  V  Y  S  Q  R  S  I  G  P  N  S  P  R  K  S  T  R  R  G  R  R  M  G  T  R  L  F  G  L  D  G  D  A  S  Q  S  A  L  G  S  V  L  *  F  F  L  S  V  V  S  V  F  L  H  L  F  H  C  Y  *  H  D  L  Q  H  V  Q  V  P  S  V  L  R  V  E  D  S  S  K  H  T  L  R  I  L  L  P  C  D  H  C  C  L  N  Q  L  P  L  I  F  S  Y  *  F  F  Q  Y  M  I  I  Y  *  Q  V  C  L  S  A  A  S  V  </second_frame>
            <third_frame>   M  A  L  Y  *  G  C  T  N  F  N  Q  K  N  S  P  I  H  V  F  F  F  L  P  I  Y  Y  H  K  K  K  *  L  K  R  S  R  L  I  T  T  V  Y  A  A  D  P  S  S  L  P  I  V  A  H  K  T  S  F  S  *  L  L  L  S  T  P  P  L  E  P  V  Q  V  G  S  L  L  P  S  T  F  S  S  S  V  D  H  L  L  Q  *  H  P  P  C  V  Y  Y  V  H  P  K  L  H  P  L  S  H  N  H  V  P  L  F  S  S  S  P  Q  A  V  D  P  L  C  P  L  V  N  *  Q  I  Y  S  K  S  S  S  L  L  Q  S  S  C  F  A  N  R  *  P  C  S  T  V  S  H  L  V  R  G  A  S  C  L  R  S  P  Q  D  T  D  Q  F  R  W  R  Q  V  Q  I  R  *  G  H  N  E  S  N  E  R  R  R  S  T  A  S  D  P  *  D  R  T  L  R  G  R  A  R  G  G  G  E  E  W  G  H  V  F  S  G  *  M  E  T  L  L  R  V  L  L  E  V  F  Y  D  F  F  Y  Q  L  S  Q  F  F  F  I  F  F  I  V  I  D  M  T  Y  S  M  F  K  F  R  Q  F  F  V  L  K  T  L  P  S  T  L  C  V  F  F  F  L  A  I  T  A  V  *  I  S  C  H  *  F  F  L  I  S  F  F  N  I  *  *  F  I  N  K  Y  V  C  L  L  L  Q  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1604" stop="1317"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FAELPAYDPLKTRISFVGVRFKFGEGIMSRMKEEGLQPAIHRTELSEEEHEAGAKNGDTSFRARWRRFSECSWKCFMIFSISCLSFSSSFSLLLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3506" PGL_stop="4384"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3506" e_stop="4233"/>
            <exon e_start="4309" e_stop="4384"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.918" acc_prob="0.939" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3506" e_stop="4233" e_length="728"/>
          </exon>
          <intron i_serial="1" don_prob="0.918" acc_prob="0.939">
            <gDNA_intron_boundary i_start="4234" i_stop="4308" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4309" e_stop="4384" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3506" stop="4233"/>
              <exon start="4309" stop="4384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584790" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTGCCATAAGTTTGCTCCATACTAATTGAGACTACTTTCTCCTATAGGCATTTCCTCTAACCCTGCCACAAATAAGGCAAGGTTTTTGCCCTTCTTTTTCCCTTGTAATTTCATCAATATTCCAAATCTTTCAACAAAACAAAAAGGGCTCCTTAATCTCCATGCAATAACAACTACGCCTCTGTTCCAAACAGATTACGATTACAATGGCAATGAATCCTCAACAAAATTAAAAAGAAAAAATAATTTGTCTCAATTGTATTGCCAATTTCTTCTTCAGGATGACTTCGAAGAACGATAAGAAAGGCAATATTTTGATGCAAAGGTATGAGATTGGGAAATTGCTTGGGCAGGGTACATTTGCAAAAGTATACCATGCTAGAAATCTCAAAACAGGGCAAAGTGTTGCTATTAAGGTGATTGACAAAGAGAAGATTATGAAGGTTGGGTTAATTGATCAAACGAAACGTGAAATCTCCGTCATGAGGCTAATCAAACACCCAAATATTGTCCAGCTCTATGAGGTTATGGCGAGCAAAACAAAAATATATTTTGCTATGGAATATGTTAGAGGTGGTGAACTTTTCAATAAGGTTGCTAAAGGCAGACTTAAAGAAGATGCTGCAAGAAAATACTTTCAACAGTTAATCGCTGCAGTCGATTTCTGTCATAGCCGTGATGTCTACCACCGTGATCTCAAGCCTGAAAATCTCCTCCTTGACGAAG : GTGGCAATCTGAAAGTCTCGGATTTTGGTCTGAGTGCATTGTTTGATTCGAAAAGGCAAGATGGTCTACTCCACAC</gDNA_template>
            <first_frame> Y  C  H  K  F  A  P  Y  *  L  R  L  L  S  P  I  G  I  S  S  N  P  A  T  N  K  A  R  F  L  P  F  F  F  P  C  N  F  I  N  I  P  N  L  S  T  K  Q  K  G  L  L  N  L  H  A  I  T  T  T  P  L  F  Q  T  D  Y  D  Y  N  G  N  E  S  S  T  K  L  K  R  K  N  N  L  S  Q  L  Y  C  Q  F  L  L  Q  D  D  F  E  E  R  *  E  R  Q  Y  F  D  A  K  V  *  D  W  E  I  A  W  A  G  Y  I  C  K  S  I  P  C  *  K  S  Q  N  R  A  K  C  C  Y  *  G  D  *  Q  R  E  D  Y  E  G  W  V  N  *  S  N  E  T  *  N  L  R  H  E  A  N  Q  T  P  K  Y  C  P  A  L  *  G  Y  G  E  Q  N  K  N  I  F  C  Y  G  I  C  *  R  W  *  T  F  Q  *  G  C  *  R  Q  T  *  R  R  C  C  K  K  I  L  S  T  V  N  R  C  S  R  F  L  S  *  P  *  C  L  P  P  *  S  Q  A  *  K  S  P  P  *  R  R :   W  Q  S  E  S  L  G  F  W  S  E  C  I  V  *  F  E  K  A  R  W  S  T  P  H </first_frame>
            <second_frame>  I  A  I  S  L  L  H  T  N  *  D  Y  F  L  L  *  A  F  P  L  T  L  P  Q  I  R  Q  G  F  C  P  S  F  S  L  V  I  S  S  I  F  Q  I  F  Q  Q  N  K  K  G  S  L  I  S  M  Q  *  Q  L  R  L  C  S  K  Q  I  T  I  T  M  A  M  N  P  Q  Q  N  *  K  E  K  I  I  C  L  N  C  I  A  N  F  F  F  R  M  T  S  K  N  D  K  K  G  N  I  L  M  Q  R  Y  E  I  G  K  L  L  G  Q  G  T  F  A  K  V  Y  H  A  R  N  L  K  T  G  Q  S  V  A  I  K  V  I  D  K  E  K  I  M  K  V  G  L  I  D  Q  T  K  R  E  I  S  V  M  R  L  I  K  H  P  N  I  V  Q  L  Y  E  V  M  A  S  K  T  K  I  Y  F  A  M  E  Y  V  R  G  G  E  L  F  N  K  V  A  K  G  R  L  K  E  D  A  A  R  K  Y  F  Q  Q  L  I  A  A  V  D  F  C  H  S  R  D  V  Y  H  R  D  L  K  P  E  N  L  L  L  D  E   : G  G  N  L  K  V  S  D  F  G  L  S  A  L  F  D  S  K  R  Q  D  G  L  L  H   </second_frame>
            <third_frame>   L  P  *  V  C  S  I  L  I  E  T  T  F  S  Y  R  H  F  L  *  P  C  H  K  *  G  K  V  F  A  L  L  F  P  L  *  F  H  Q  Y  S  K  S  F  N  K  T  K  R  A  P  *  S  P  C  N  N  N  Y  A  S  V  P  N  R  L  R  L  Q  W  Q  *  I  L  N  K  I  K  K  K  K  *  F  V  S  I  V  L  P  I  S  S  S  G  *  L  R  R  T  I  R  K  A  I  F  *  C  K  G  M  R  L  G  N  C  L  G  R  V  H  L  Q  K  Y  T  M  L  E  I  S  K  Q  G  K  V  L  L  L  R  *  L  T  K  R  R  L  *  R  L  G  *  L  I  K  R  N  V  K  S  P  S  *  G  *  S  N  T  Q  I  L  S  S  S  M  R  L  W  R  A  K  Q  K  Y  I  L  L  W  N  M  L  E  V  V  N  F  S  I  R  L  L  K  A  D  L  K  K  M  L  Q  E  N  T  F  N  S  *  S  L  Q  S  I  S  V  I  A  V  M  S  T  T  V  I  S  S  L  K  I  S  S  L  T  K  :  V  A  I  *  K  S  R  I  L  V  *  V  H  C  L  I  R  K  G  K  M  V  Y  S  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3741" stop="4233"/>
                    <exon start="4309" stop="4382"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KEKIICLNCIANFFFRMTSKNDKKGNILMQRYEIGKLLGQGTFAKVYHARNLKTGQSVAIKVIDKEKIMKVGLIDQTKREISVMRLIKHPNIVQLYEVMASKTKIYFAMEYVRGGELFNKVAKGRLKEDAARKYFQQLIAAVDFCHSRDVYHRDLKPENLLLDEGGNLKVSDFGLSALFDSKRQDGLLH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="14808" PGL_stop="11622"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14808" e_stop="14226"/>
            <exon e_start="11879" e_stop="11622"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.988" e_score="0.990"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="14808" e_stop="14226" e_length="583"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.988">
            <gDNA_intron_boundary i_start="14225" i_stop="11880" i_length="2346"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11879" e_stop="11622" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14808" stop="14226"/>
              <exon start="11879" stop="11622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565126" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAAGGGTTTTAAACATGTTAAATTTTATATTGAGGATGATAAGTTGTGTAGTATAAATGATGATGAGTATGGTGGGATTGATTATTCGTCTGATAGATCAGAGTCTGAGTCTGAAATAGAGATCAGAAGGAGGTCAGCTAGTTTACCTAGGCCAGCTAGCTTGAATGCATTTGATATTATTTCATTTTCCCGTGGCTTTGATTTGTCCGGTTTGTTTGAGGAGGGAGGAGATGGGGCAAGGTTTGTATCTGGGGCTCCTGTGCCCAAGATCATAAATAAGTTGGAGGAAATTGCTAAAGTTGTGAGCTTTGCAGTAAGGAAGAAGGATTGTAAAGTGAGTATGGAGGGGTCTAAGGAAGGTGCAAAGGGGCCGTTGACAGTTGCAGCTGAGATATTTGAGTTGACACCATCGTTGAGAGTTGTTGAAGTGAAGAAGAAAGGAGGAGATAGCTTGGAGTATGAGGAGTTTTACAACAGGGAATTGAAGCCAGGATTACAGAATTTAGCACATGAAGTTGGATACCCTGTTAATTCATCGTATTTGCCATCAGATACTGAATAAAGAGAGAGAAGGGGAAAGG : GTAACTGCGGACATCTTAGGGACCAGTTGGAGGCTTCTTGCACTCAAACGGAGATCTCCTGAATACCAAAAAGAAGGAACACATGCCAAGCTAGACTGATGGAGCTTCATGCTAGTGAACCTTGACATGAGTTGATGTTCGTAATCAAGATTTCACCACTTCAATTCTAGCCAGCGAGGAACATGGTTCGTAGTCTAATTGTATATTAGTAGCCCCGTCAACAAGGCCCCTCCAGTGCGGGTTAGTTGATGTAGTAGT</gDNA_template>
            <first_frame> K  K  G  F  K  H  V  K  F  Y  I  E  D  D  K  L  C  S  I  N  D  D  E  Y  G  G  I  D  Y  S  S  D  R  S  E  S  E  S  E  I  E  I  R  R  R  S  A  S  L  P  R  P  A  S  L  N  A  F  D  I  I  S  F  S  R  G  F  D  L  S  G  L  F  E  E  G  G  D  G  A  R  F  V  S  G  A  P  V  P  K  I  I  N  K  L  E  E  I  A  K  V  V  S  F  A  V  R  K  K  D  C  K  V  S  M  E  G  S  K  E  G  A  K  G  P  L  T  V  A  A  E  I  F  E  L  T  P  S  L  R  V  V  E  V  K  K  K  G  G  D  S  L  E  Y  E  E  F  Y  N  R  E  L  K  P  G  L  Q  N  L  A  H  E  V  G  Y  P  V  N  S  S  Y  L  P  S  D  T  E  *  R  E  R  R  G  K   : G  N  C  G  H  L  R  D  Q  L  E  A  S  C  T  Q  T  E  I  S  *  I  P  K  R  R  N  T  C  Q  A  R  L  M  E  L  H  A  S  E  P  *  H  E  L  M  F  V  I  K  I  S  P  L  Q  F  *  P  A  R  N  M  V  R  S  L  I  V  Y  *  *  P  R  Q  Q  G  P  S  S  A  G  *  L  M  *  *  </first_frame>
            <second_frame>  R  R  V  L  N  M  L  N  F  I  L  R  M  I  S  C  V  V  *  M  M  M  S  M  V  G  L  I  I  R  L  I  D  Q  S  L  S  L  K  *  R  S  E  G  G  Q  L  V  Y  L  G  Q  L  A  *  M  H  L  I  L  F  H  F  P  V  A  L  I  C  P  V  C  L  R  R  E  E  M  G  Q  G  L  Y  L  G  L  L  C  P  R  S  *  I  S  W  R  K  L  L  K  L  *  A  L  Q  *  G  R  R  I  V  K  *  V  W  R  G  L  R  K  V  Q  R  G  R  *  Q  L  Q  L  R  Y  L  S  *  H  H  R  *  E  L  L  K  *  R  R  K  E  E  I  A  W  S  M  R  S  F  T  T  G  N  *  S  Q  D  Y  R  I  *  H  M  K  L  D  T  L  L  I  H  R  I  C  H  Q  I  L  N  K  E  R  E  G  E  R  :  V  T  A  D  I  L  G  T  S  W  R  L  L  A  L  K  R  R  S  P  E  Y  Q  K  E  G  T  H  A  K  L  D  *  W  S  F  M  L  V  N  L  D  M  S  *  C  S  *  S  R  F  H  H  F  N  S  S  Q  R  G  T  W  F  V  V  *  L  Y  I  S  S  P  V  N  K  A  P  P  V  R  V  S  *  C  S  S </second_frame>
            <third_frame>   E  G  F  *  T  C  *  I  L  Y  *  G  *  *  V  V  *  Y  K  *  *  *  V  W  W  D  *  L  F  V  *  *  I  R  V  *  V  *  N  R  D  Q  K  E  V  S  *  F  T  *  A  S  *  L  E  C  I  *  Y  Y  F  I  F  P  W  L  *  F  V  R  F  V  *  G  G  R  R  W  G  K  V  C  I  W  G  S  C  A  Q  D  H  K  *  V  G  G  N  C  *  S  C  E  L  C  S  K  E  E  G  L  *  S  E  Y  G  G  V  *  G  R  C  K  G  A  V  D  S  C  S  *  D  I  *  V  D  T  I  V  E  S  C  *  S  E  E  E  R  R  R  *  L  G  V  *  G  V  L  Q  Q  G  I  E  A  R  I  T  E  F  S  T  *  S  W  I  P  C  *  F  I  V  F  A  I  R  Y  *  I  K  R  E  K  G  K  G :   *  L  R  T  S  *  G  P  V  G  G  F  L  H  S  N  G  D  L  L  N  T  K  K  K  E  H  M  P  S  *  T  D  G  A  S  C  *  *  T  L  T  *  V  D  V  R  N  Q  D  F  T  T  S  I  L  A  S  E  E  H  G  S  *  S  N  C  I  L  V  A  P  S  T  R  P  L  Q  C  G  L  V  D  V  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14808" stop="14245"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKGFKHVKFYIEDDKLCSINDDEYGGIDYSSDRSESESEIEIRRRSASLPRPASLNAFDIISFSRGFDLSGLFEEGGDGARFVSGAPVPKIINKLEEIAKVVSFAVRKKDCKVSMEGSKEGAKGPLTVAAEIFELTPSLRVVEVKKKGGDSLEYEEFYNRELKPGLQNLAHEVGYPVNSSYLPSDTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="28649" PGL_stop="29720"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28649" e_stop="29720"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28649" e_stop="29720" e_length="1072"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28649" stop="29720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574837" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTGAAGCAATTCCACGACTCAGGTTGATTGCCAATGTATGTTTGAAAATTCTATGCTAAAAACCCCAAAGGAAGTTTAGGTTCAACAAACCCTCTCACAGATCCACATAAATTTGTCCATCTCTTTCTGTTTTTCCAACTCTATTATTATTTGTTCCTTTTTTTCTCTCTCCATATATAAATAAAACCAATTGTATTGGTCTTATTTACCTCCACTTGAATTCATCTACTCTTATCAACTCTATATGGCATTTACATCAACTACTATCAACTGAAAGAAACAATCTCAATTCCCACAGAACAAAAAATGAAAATCCTCTTCACACTCTTTATCTTCCTTTCTCTTTTCACATTCTCAAAATCAGAATCCCCTTGCAGAAACAACACAGATGTTGATTCATCTCTTGTTTTCAAGGCTTTCAGTTCTGTTTATGGCTTCAACATCTCTTGGTTCAGCTCAAACTGTTCCTCTCCAATAACTGAAATTAACTTATCTTCAAGAAACCTCACTGGCATAGTCTCATGGAAGTACTTGAAAAATTTGTCCCATCTTCATTCTATAGATCTATCAAATAATTCCTTAAAGGGTTCTGTTCATCCTCTGTTTTGGTCCATTTCATCTTTGGTTCAAGTCAATTTGTCAAAGAATAAGCTTGGTGGAGCTGTTGCTGTAGCAAGATCATCATCATCTATTCAAAGACTTGATCTTTCTTTCAACAGGTTTACTAACTTAGGCTCTGTTTTTTATGGTTTTCCTAATCTCACTTCTCTTGACCTTTCACATAATGATATCAAGTTTTTGCCTTTTTGGTTTACCAACCTAACTAAGCTTGAAAATTTGAGCATTTCTAGCTGTAACATTTATGGCAATCCAAAACCCCTTTCACATATCAAGTCACTGAAGCATTTAGATGTTTCTGTCAACCATATGGATGGTAAATTACCTAATGATTTTCCTCCTCTGTCTAGTCTCAATTTCTTGAATATTTCATTCAATAACTTCACTGGGGAAATACCTAAAGACCAGTTTGCTAAATTTGGGAATTCTTCTTTCTTTCATGCTGGGCACTTG</gDNA_template>
            <first_frame> C  E  A  I  P  R  L  R  L  I  A  N  V  C  L  K  I  L  C  *  K  P  Q  R  K  F  R  F  N  K  P  S  H  R  S  T  *  I  C  P  S  L  S  V  F  P  T  L  L  L  F  V  P  F  F  L  S  P  Y  I  N  K  T  N  C  I  G  L  I  Y  L  H  L  N  S  S  T  L  I  N  S  I  W  H  L  H  Q  L  L  S  T  E  R  N  N  L  N  S  H  R  T  K  N  E  N  P  L  H  T  L  Y  L  P  F  S  F  H  I  L  K  I  R  I  P  L  Q  K  Q  H  R  C  *  F  I  S  C  F  Q  G  F  Q  F  C  L  W  L  Q  H  L  L  V  Q  L  K  L  F  L  S  N  N  *  N  *  L  I  F  K  K  P  H  W  H  S  L  M  E  V  L  E  K  F  V  P  S  S  F  Y  R  S  I  K  *  F  L  K  G  F  C  S  S  S  V  L  V  H  F  I  F  G  S  S  Q  F  V  K  E  *  A  W  W  S  C  C  C  S  K  I  I  I  I  Y  S  K  T  *  S  F  F  Q  Q  V  Y  *  L  R  L  C  F  L  W  F  S  *  S  H  F  S  *  P  F  T  *  *  Y  Q  V  F  A  F  L  V  Y  Q  P  N  *  A  *  K  F  E  H  F  *  L  *  H  L  W  Q  S  K  T  P  F  T  Y  Q  V  T  E  A  F  R  C  F  C  Q  P  Y  G  W  *  I  T  *  *  F  S  S  S  V  *  S  Q  F  L  E  Y  F  I  Q  *  L  H  W  G  N  T  *  R  P  V  C  *  I  W  E  F  F  F  L  S  C  W  A  L  </first_frame>
            <second_frame>  V  K  Q  F  H  D  S  G  *  L  P  M  Y  V  *  K  F  Y  A  K  N  P  K  G  S  L  G  S  T  N  P  L  T  D  P  H  K  F  V  H  L  F  L  F  F  Q  L  Y  Y  Y  L  F  L  F  F  S  L  H  I  *  I  K  P  I  V  L  V  L  F  T  S  T  *  I  H  L  L  L  S  T  L  Y  G  I  Y  I  N  Y  Y  Q  L  K  E  T  I  S  I  P  T  E  Q  K  M  K  I  L  F  T  L  F  I  F  L  S  L  F  T  F  S  K  S  E  S  P  C  R  N  N  T  D  V  D  S  S  L  V  F  K  A  F  S  S  V  Y  G  F  N  I  S  W  F  S  S  N  C  S  S  P  I  T  E  I  N  L  S  S  R  N  L  T  G  I  V  S  W  K  Y  L  K  N  L  S  H  L  H  S  I  D  L  S  N  N  S  L  K  G  S  V  H  P  L  F  W  S  I  S  S  L  V  Q  V  N  L  S  K  N  K  L  G  G  A  V  A  V  A  R  S  S  S  S  I  Q  R  L  D  L  S  F  N  R  F  T  N  L  G  S  V  F  Y  G  F  P  N  L  T  S  L  D  L  S  H  N  D  I  K  F  L  P  F  W  F  T  N  L  T  K  L  E  N  L  S  I  S  S  C  N  I  Y  G  N  P  K  P  L  S  H  I  K  S  L  K  H  L  D  V  S  V  N  H  M  D  G  K  L  P  N  D  F  P  P  L  S  S  L  N  F  L  N  I  S  F  N  N  F  T  G  E  I  P  K  D  Q  F  A  K  F  G  N  S  S  F  F  H  A  G  H  L </second_frame>
            <third_frame>   *  S  N  S  T  T  Q  V  D  C  Q  C  M  F  E  N  S  M  L  K  T  P  K  E  V  *  V  Q  Q  T  L  S  Q  I  H  I  N  L  S  I  S  F  C  F  S  N  S  I  I  I  C  S  F  F  S  L  S  I  Y  K  *  N  Q  L  Y  W  S  Y  L  P  P  L  E  F  I  Y  S  Y  Q  L  Y  M  A  F  T  S  T  T  I  N  *  K  K  Q  S  Q  F  P  Q  N  K  K  *  K  S  S  S  H  S  L  S  S  F  L  F  S  H  S  Q  N  Q  N  P  L  A  E  T  T  Q  M  L  I  H  L  L  F  S  R  L  S  V  L  F  M  A  S  T  S  L  G  S  A  Q  T  V  P  L  Q  *  L  K  L  T  Y  L  Q  E  T  S  L  A  *  S  H  G  S  T  *  K  I  C  P  I  F  I  L  *  I  Y  Q  I  I  P  *  R  V  L  F  I  L  C  F  G  P  F  H  L  W  F  K  S  I  C  Q  R  I  S  L  V  E  L  L  L  *  Q  D  H  H  H  L  F  K  D  L  I  F  L  S  T  G  L  L  T  *  A  L  F  F  M  V  F  L  I  S  L  L  L  T  F  H  I  M  I  S  S  F  C  L  F  G  L  P  T  *  L  S  L  K  I  *  A  F  L  A  V  T  F  M  A  I  Q  N  P  F  H  I  S  S  H  *  S  I  *  M  F  L  S  T  I  W  M  V  N  Y  L  M  I  F  L  L  C  L  V  S  I  S  *  I  F  H  S  I  T  S  L  G  K  Y  L  K  T  S  L  L  N  L  G  I  L  L  S  F  M  L  G  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28869" stop="29720"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHLLLSTLYGIYINYYQLKETISIPTEQKMKILFTLFIFLSLFTFSKSESPCRNNTDVDSSLVFKAFSSVYGFNISWFSSNCSSPITEINLSSRNLTGIVSWKYLKNLSHLHSIDLSNNSLKGSVHPLFWSISSLVQVNLSKNKLGGAVAVARSSSSIQRLDLSFNRFTNLGSVFYGFPNLTSLDLSHNDIKFLPFWFTNLTKLENLSISSCNIYGNPKPLSHIKSLKHLDVSVNHMDGKLPNDFPPLSSLNFLNISFNNFTGEIPKDQFAKFGNSSFFHAGHL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="31511" PGL_stop="32208"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31511" e_stop="32208"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="31511" e_stop="32208" e_length="698"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31511" stop="32208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31639" stop="32010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596517" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGAAATGGAGCCGACGCGCTCGACTCGAGACTAAAACTCGGCGGTGACTCAGTGAGTGAGATGGTGGAGTGCCTCCGAGTTGGGTACTTGTGTACGGCGGAGGCCCCAAATAAACGGCCTAGAATGCAACAAGTTTTGGGTTTGCTAAAAGACATACAGCCGCACTACCAACTCGGAAAAACGCAAAATTTATGATCTTCAGGTAAACCACTCTCACTCCCAGCGCGTGATTCACACGACGAGGAAGATTGATTGGCAGCATTGCATTATTGTACTCCCATGTGTTTGATTTGACCATTGAAAAGTCAAAAGTACAATGCATCTATTCCACATCATCAATGGCATTCAGTCACGTGCAGGTCACGTGATGAAGTGTAGTGAGAGGAACATGTTTTGCTTGTTTGTCTCTTTTTTACTCTCTCTTTCTTTTTCTTTTCTTTTTTCGTAATTTGTATAGTATTTAATTAGAAAAAGAAAATTGAACAAAAATCATGGGTAAATCTTTTTTTATATATAATCTTTTATTTATTTATTTAGATTTTAGGGAGTGTAATTTGAAGTGGAGCAGAGAAGGCAGAGAATCCCACTAATTGCTTGTCTCTACTAAGGGACATTAGAATCATTCAACTCCTTTAGTTTTCTTTTCTTTTACCTTCTTTATTTTTTTCTCTTTAATTTAAACTTTTATTGTTTGTTT</gDNA_template>
            <first_frame> W  K  W  S  R  R  A  R  L  E  T  K  T  R  R  *  L  S  E  *  D  G  G  V  P  P  S  W  V  L  V  Y  G  G  G  P  K  *  T  A  *  N  A  T  S  F  G  F  A  K  R  H  T  A  A  L  P  T  R  K  N  A  K  F  M  I  F  R  *  T  T  L  T  P  S  A  *  F  T  R  R  G  R  L  I  G  S  I  A  L  L  Y  S  H  V  F  D  L  T  I  E  K  S  K  V  Q  C  I  Y  S  T  S  S  M  A  F  S  H  V  Q  V  T  *  *  S  V  V  R  G  T  C  F  A  C  L  S  L  F  Y  S  L  F  L  F  L  F  F  F  R  N  L  Y  S  I  *  L  E  K  E  N  *  T  K  I  M  G  K  S  F  F  I  Y  N  L  L  F  I  Y  L  D  F  R  E  C  N  L  K  W  S  R  E  G  R  E  S  H  *  L  L  V  S  T  K  G  H  *  N  H  S  T  P  L  V  F  F  S  F  T  F  F  I  F  F  S  L  I  *  T  F  I  V  C   </first_frame>
            <second_frame>  G  N  G  A  D  A  L  D  S  R  L  K  L  G  G  D  S  V  S  E  M  V  E  C  L  R  V  G  Y  L  C  T  A  E  A  P  N  K  R  P  R  M  Q  Q  V  L  G  L  L  K  D  I  Q  P  H  Y  Q  L  G  K  T  Q  N  L  *  S  S  G  K  P  L  S  L  P  A  R  D  S  H  D  E  E  D  *  L  A  A  L  H  Y  C  T  P  M  C  L  I  *  P  L  K  S  Q  K  Y  N  A  S  I  P  H  H  Q  W  H  S  V  T  C  R  S  R  D  E  V  *  *  E  E  H  V  L  L  V  C  L  F  F  T  L  S  F  F  F  F  S  F  F  V  I  C  I  V  F  N  *  K  K  K  I  E  Q  K  S  W  V  N  L  F  L  Y  I  I  F  Y  L  F  I  *  I  L  G  S  V  I  *  S  G  A  E  K  A  E  N  P  T  N  C  L  S  L  L  R  D  I  R  I  I  Q  L  L  *  F  S  F  L  L  P  S  L  F  F  S  L  *  F  K  L  L  L  F  V  </second_frame>
            <third_frame>   E  M  E  P  T  R  S  T  R  D  *  N  S  A  V  T  Q  *  V  R  W  W  S  A  S  E  L  G  T  C  V  R  R  R  P  Q  I  N  G  L  E  C  N  K  F  W  V  C  *  K  T  Y  S  R  T  T  N  S  E  K  R  K  I  Y  D  L  Q  V  N  H  S  H  S  Q  R  V  I  H  T  T  R  K  I  D  W  Q  H  C  I  I  V  L  P  C  V  *  F  D  H  *  K  V  K  S  T  M  H  L  F  H  I  I  N  G  I  Q  S  R  A  G  H  V  M  K  C  S  E  R  N  M  F  C  L  F  V  S  F  L  L  S  L  S  F  S  F  L  F  S  *  F  V  *  Y  L  I  R  K  R  K  L  N  K  N  H  G  *  I  F  F  Y  I  *  S  F  I  Y  L  F  R  F  *  G  V  *  F  E  V  E  Q  R  R  Q  R  I  P  L  I  A  C  L  Y  *  G  T  L  E  S  F  N  S  F  S  F  L  F  F  Y  L  L  Y  F  F  L  F  N  L  N  F  Y  C  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31512" stop="31706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNGADALDSRLKLGGDSVSEMVECLRVGYLCTAEAPNKRPRMQQVLGLLKDIQPHYQLGKTQNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36795" PGL_stop="44458"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36795" e_stop="37381"/>
            <exon e_start="37594" e_stop="37654"/>
            <exon e_start="39753" e_stop="39991"/>
            <exon e_start="40711" e_stop="40915"/>
            <exon e_start="41336" e_stop="41467"/>
            <exon e_start="41553" e_stop="41644"/>
            <exon e_start="41735" e_stop="41829"/>
            <exon e_start="44036" e_stop="44458"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.998"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.810" acc_prob="0.998" e_score="0.993"/>
          <exon-intron don_prob="0.982" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="36795" e_stop="37381" e_length="587"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="37382" i_stop="37593" i_length="212"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37594" e_stop="37654" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="37655" i_stop="39752" i_length="2098"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="39753" e_stop="39991" e_length="239"/>
          </exon>
          <intron i_serial="3" don_prob="0.810" acc_prob="0.998">
            <gDNA_intron_boundary i_start="39992" i_stop="40710" i_length="719"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="40711" e_stop="40915" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.994">
            <gDNA_intron_boundary i_start="40916" i_stop="41335" i_length="420"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41336" e_stop="41467" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.963" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41468" i_stop="41552" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="41553" e_stop="41644" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.941" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41645" i_stop="41734" i_length="90"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="41735" e_stop="41829" e_length="95"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="41830" i_stop="44035" i_length="2206"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="44036" e_stop="44458" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36795" stop="37381"/>
              <exon start="37594" stop="37654"/>
              <exon start="39753" stop="39891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39889" stop="39991"/>
              <exon start="40711" stop="40915"/>
              <exon start="41336" stop="41467"/>
              <exon start="41553" stop="41644"/>
              <exon start="41735" stop="41829"/>
              <exon start="44036" stop="44458"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568156" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41617" stop="41644"/>
              <exon start="41735" stop="41829"/>
              <exon start="44036" stop="44443"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588357" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGGACACTTTCTCAACCCAATTACCCCAACAGCTCACGACGGAACCCTTGAATCTCCAATTTTTTCAATTATCGAAACCCCTAATATTTCAAAACTTCGAAATCCCAATTTCGTAGACTGAAAACCTAATTGAATCGTAATGGCATCGCAGAAGAAGGAATCGGAGGGAATCGCTCTACTGTCTATCTATGGCGACGACGAAGATGAAGACATGGAAGAAGTTGAAGAAGAACAAAGGGAAGAAGATGCACAAGAACACAGACCTGAATCACATAACTTAGGCTTTACAATGGGCACAGAGTTCCAAGATGATAGCAAAAAAGTTTTCGGGTCTGATTCAGGTCGGAGTTCGACTCCTTCACCTCTAATTCAACAACTTCAGCAACAACAGTCTGTTGAAAATTTCACACCTAGCAAGGTTTCGAATTTTGGTGTTGGTTCTACCACTACGACGCCATTAGCGTCCGTTTCTTCCCCAAATCCTCAGCCAATGGAGATGAATTTGAATGTGAATGTGAGTAGACGAGCAAGGCTAACTATTGTTGATTATGCTCATGATGAAGTTACCATGTCACCGGAGCCTGAG : GAAGGAGAAGTAATGGCTAGTGGAAGAGTCATGTATGGAGCGGAACTTCAAACTGCTAGTG : TTGAATTTATGGAAAAGGCTTCACCAGCTCTTCAGGTTAGAACACCTAGTGCTCAAACCCCTCCTCAGTCAGCTGAGCCAACTGAACAATTGGATGATACTATGGACTTTGCTGTTAATGAAGGACATGGAGTTGCTGAAGAATCTGTTATGGTTCCTGCAGAAGAACAAAAAGAGTTAGATCTGTTGGAGAAATTTCTTCCTCCTCCACCAAAGGAGAAGTGCTCAGATGAATTGCAA : GAGAAGATCATGAAATTCCTTGCTCTGAAGAAGACTACTGGCAGAAGCTTTAATGCAGAAGTACGCAACAGAAAGGAGTATCGGAATCCAGACTTCTTGCTGCATTCAGTGACTTATCAAGATATTGACCAGATAGGATCTTGCTTCAGCAAAGACGTATTCGATCCGCATGGATATGACAAAAGCGACTTCTATGATGAAATAG : AGGCTGACTCAAAGCGTGAAATGGAGAGAAGGGAGCAAGAACGGAGGAGGAGTCCAAAAGTTGACTTCATATCGGGAGGAACACAGCCTGCACCGATGGTTCCTACACCAAAAATCAATCTGTCGATTCCAG : GGATGGCTCCTGTTGCTGCTGGTGCATTACCGCCCACTGTAGATGTTGTAACTCGGGATGGTAGACAGAACAAAAAGTCGAAATGGGACAAG : GTGGATGGTGATCGGAGAGACCCTGTTTCTGCTGTTGGTGCACATGCAGCACTTCTATCAGCTGCTAATGCTGGTGCTGGTTACACTGCATTTGC : GCAACAAAGACGTCGGGAGGCAGAAGAGAAGCGACCTAGTGACAAGAAGTTGGATAGAAGATCTTGAAAATCTAATTAGACATGCGACTCCTGAAAGCTATTGACCCTTTCCAACACATCCAGTCATGCACAAGTGTTGGCACAAAGAAAGCAGTTAGAGCAACGGGTGCCTCATTTAGAAAGACAAATTACTGTCAACTCTGAATATTCCCATATACTGTATATACCCAGTTTTTGTTTAGTAGTGAAGTCGATTACAGGTTTTAAAGTTAAAGGAGTGTAGAGTTTTCAATATAAAGCTGGGGAGAAAAAAAATGTACAAGTCTTCTTTTGGCCATGTGCGCCATAGATTGCAAATTATTAAGTTGTACTCTTTGACTAGAGTCCTAAAAGAGCTGAAATTTTTTTAATGTACTTTGAAAA</gDNA_template>
            <first_frame> P  D  T  F  S  T  Q  L  P  Q  Q  L  T  T  E  P  L  N  L  Q  F  F  Q  L  S  K  P  L  I  F  Q  N  F  E  I  P  I  S  *  T  E  N  L  I  E  S  *  W  H  R  R  R  R  N  R  R  E  S  L  Y  C  L  S  M  A  T  T  K  M  K  T  W  K  K  L  K  K  N  K  G  K  K  M  H  K  N  T  D  L  N  H  I  T  *  A  L  Q  W  A  Q  S  S  K  M  I  A  K  K  F  S  G  L  I  Q  V  G  V  R  L  L  H  L  *  F  N  N  F  S  N  N  S  L  L  K  I  S  H  L  A  R  F  R  I  L  V  L  V  L  P  L  R  R  H  *  R  P  F  L  P  Q  I  L  S  Q  W  R  *  I  *  M  *  M  *  V  D  E  Q  G  *  L  L  L  I  M  L  M  M  K  L  P  C  H  R  S  L  R :   K  E  K  *  W  L  V  E  E  S  C  M  E  R  N  F  K  L  L  V  :  L  N  L  W  K  R  L  H  Q  L  F  R  L  E  H  L  V  L  K  P  L  L  S  Q  L  S  Q  L  N  N  W  M  I  L  W  T  L  L  L  M  K  D  M  E  L  L  K  N  L  L  W  F  L  Q  K  N  K  K  S  *  I  C  W  R  N  F  F  L  L  H  Q  R  R  S  A  Q  M  N  C  K :   R  R  S  *  N  S  L  L  *  R  R  L  L  A  E  A  L  M  Q  K  Y  A  T  E  R  S  I  G  I  Q  T  S  C  C  I  Q  *  L  I  K  I  L  T  R  *  D  L  A  S  A  K  T  Y  S  I  R  M  D  M  T  K  A  T  S  M  M  K  *  :  R  L  T  Q  S  V  K  W  R  E  G  S  K  N  G  G  G  V  Q  K  L  T  S  Y  R  E  E  H  S  L  H  R  W  F  L  H  Q  K  S  I  C  R  F  Q  :  G  W  L  L  L  L  L  V  H  Y  R  P  L  *  M  L  *  L  G  M  V  D  R  T  K  S  R  N  G  T  R :   W  M  V  I  G  E  T  L  F  L  L  L  V  H  M  Q  H  F  Y  Q  L  L  M  L  V  L  V  T  L  H  L   : R  N  K  D  V  G  R  Q  K  R  S  D  L  V  T  R  S  W  I  E  D  L  E  N  L  I  R  H  A  T  P  E  S  Y  *  P  F  P  T  H  P  V  M  H  K  C  W  H  K  E  S  S  *  S  N  G  C  L  I  *  K  D  K  L  L  S  T  L  N  I  P  I  Y  C  I  Y  P  V  F  V  *  *  *  S  R  L  Q  V  L  K  L  K  E  C  R  V  F  N  I  K  L  G  R  K  K  M  Y  K  S  S  F  G  H  V  R  H  R  L  Q  I  I  K  L  Y  S  L  T  R  V  L  K  E  L  K  F  F  *  C  T  L  K  </first_frame>
            <second_frame>  R  T  L  S  Q  P  N  Y  P  N  S  S  R  R  N  P  *  I  S  N  F  F  N  Y  R  N  P  *  Y  F  K  T  S  K  S  Q  F  R  R  L  K  T  *  L  N  R  N  G  I  A  E  E  G  I  G  G  N  R  S  T  V  Y  L  W  R  R  R  R  *  R  H  G  R  S  *  R  R  T  K  G  R  R  C  T  R  T  Q  T  *  I  T  *  L  R  L  Y  N  G  H  R  V  P  R  *  *  Q  K  S  F  R  V  *  F  R  S  E  F  D  S  F  T  S  N  S  T  T  S  A  T  T  V  C  *  K  F  H  T  *  Q  G  F  E  F  W  C  W  F  Y  H  Y  D  A  I  S  V  R  F  F  P  K  S  S  A  N  G  D  E  F  E  C  E  C  E  *  T  S  K  A  N  Y  C  *  L  C  S  *  *  S  Y  H  V  T  G  A  *   : G  R  R  S  N  G  *  W  K  S  H  V  W  S  G  T  S  N  C  *  C :   *  I  Y  G  K  G  F  T  S  S  S  G  *  N  T  *  C  S  N  P  S  S  V  S  *  A  N  *  T  I  G  *  Y  Y  G  L  C  C  *  *  R  T  W  S  C  *  R  I  C  Y  G  S  C  R  R  T  K  R  V  R  S  V  G  E  I  S  S  S  S  T  K  G  E  V  L  R  *  I  A   : R  E  D  H  E  I  P  C  S  E  E  D  Y  W  Q  K  L  *  C  R  S  T  Q  Q  K  G  V  S  E  S  R  L  L  A  A  F  S  D  L  S  R  Y  *  P  D  R  I  L  L  Q  Q  R  R  I  R  S  A  W  I  *  Q  K  R  L  L  *  *  N  R :   G  *  L  K  A  *  N  G  E  K  G  A  R  T  E  E  E  S  K  S  *  L  H  I  G  R  N  T  A  C  T  D  G  S  Y  T  K  N  Q  S  V  D  S  R :   D  G  S  C  C  C  W  C  I  T  A  H  C  R  C  C  N  S  G  W  *  T  E  Q  K  V  E  M  G  Q   : G  G  W  *  S  E  R  P  C  F  C  C  W  C  T  C  S  T  S  I  S  C  *  C  W  C  W  L  H  C  I  C  :  A  T  K  T  S  G  G  R  R  E  A  T  *  *  Q  E  V  G  *  K  I  L  K  I  *  L  D  M  R  L  L  K  A  I  D  P  F  Q  H  I  Q  S  C  T  S  V  G  T  K  K  A  V  R  A  T  G  A  S  F  R  K  T  N  Y  C  Q  L  *  I  F  P  Y  T  V  Y  T  Q  F  L  F  S  S  E  V  D  Y  R  F  *  S  *  R  S  V  E  F  S  I  *  S  W  G  E  K  K  C  T  S  L  L  L  A  M  C  A  I  D  C  K  L  L  S  C  T  L  *  L  E  S  *  K  S  *  N  F  F  N  V  L  *  K </second_frame>
            <third_frame>   G  H  F  L  N  P  I  T  P  T  A  H  D  G  T  L  E  S  P  I  F  S  I  I  E  T  P  N  I  S  K  L  R  N  P  N  F  V  D  *  K  P  N  *  I  V  M  A  S  Q  K  K  E  S  E  G  I  A  L  L  S  I  Y  G  D  D  E  D  E  D  M  E  E  V  E  E  E  Q  R  E  E  D  A  Q  E  H  R  P  E  S  H  N  L  G  F  T  M  G  T  E  F  Q  D  D  S  K  K  V  F  G  S  D  S  G  R  S  S  T  P  S  P  L  I  Q  Q  L  Q  Q  Q  Q  S  V  E  N  F  T  P  S  K  V  S  N  F  G  V  G  S  T  T  T  T  P  L  A  S  V  S  S  P  N  P  Q  P  M  E  M  N  L  N  V  N  V  S  R  R  A  R  L  T  I  V  D  Y  A  H  D  E  V  T  M  S  P  E  P  E  :  E  G  E  V  M  A  S  G  R  V  M  Y  G  A  E  L  Q  T  A  S   : V  E  F  M  E  K  A  S  P  A  L  Q  V  R  T  P  S  A  Q  T  P  P  Q  S  A  E  P  T  E  Q  L  D  D  T  M  D  F  A  V  N  E  G  H  G  V  A  E  E  S  V  M  V  P  A  E  E  Q  K  E  L  D  L  L  E  K  F  L  P  P  P  P  K  E  K  C  S  D  E  L  Q  :  E  K  I  M  K  F  L  A  L  K  K  T  T  G  R  S  F  N  A  E  V  R  N  R  K  E  Y  R  N  P  D  F  L  L  H  S  V  T  Y  Q  D  I  D  Q  I  G  S  C  F  S  K  D  V  F  D  P  H  G  Y  D  K  S  D  F  Y  D  E  I   : E  A  D  S  K  R  E  M  E  R  R  E  Q  E  R  R  R  S  P  K  V  D  F  I  S  G  G  T  Q  P  A  P  M  V  P  T  P  K  I  N  L  S  I  P   : G  M  A  P  V  A  A  G  A  L  P  P  T  V  D  V  V  T  R  D  G  R  Q  N  K  K  S  K  W  D  K  :  V  D  G  D  R  R  D  P  V  S  A  V  G  A  H  A  A  L  L  S  A  A  N  A  G  A  G  Y  T  A  F  A :   Q  Q  R  R  R  E  A  E  E  K  R  P  S  D  K  K  L  D  R  R  S  *  K  S  N  *  T  C  D  S  *  K  L  L  T  L  S  N  T  S  S  H  A  Q  V  L  A  Q  R  K  Q  L  E  Q  R  V  P  H  L  E  R  Q  I  T  V  N  S  E  Y  S  H  I  L  Y  I  P  S  F  C  L  V  V  K  S  I  T  G  F  K  V  K  G  V  *  S  F  Q  Y  K  A  G  E  K  K  N  V  Q  V  F  F  W  P  C  A  P  *  I  A  N  Y  *  V  V  L  F  D  *  S  P  K  R  A  E  I  F  L  M  Y  F  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36929" stop="37381"/>
                    <exon start="37594" stop="37654"/>
                    <exon start="39753" stop="39991"/>
                    <exon start="40711" stop="40915"/>
                    <exon start="41336" stop="41467"/>
                    <exon start="41553" stop="41644"/>
                    <exon start="41735" stop="41829"/>
                    <exon start="44036" stop="44102"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVMASQKKESEGIALLSIYGDDEDEDMEEVEEEQREEDAQEHRPESHNLGFTMGTEFQDDSKKVFGSDSGRSSTPSPLIQQLQQQQSVENFTPSKVSNFGVGSTTTTPLASVSSPNPQPMEMNLNVNVSRRARLTIVDYAHDEVTMSPEPEEGEVMASGRVMYGAELQTASVEFMEKASPALQVRTPSAQTPPQSAEPTEQLDDTMDFAVNEGHGVAEESVMVPAEEQKELDLLEKFLPPPPKEKCSDELQEKIMKFLALKKTTGRSFNAEVRNRKEYRNPDFLLHSVTYQDIDQIGSCFSKDVFDPHGYDKSDFYDEIEADSKREMERREQERRRSPKVDFISGGTQPAPMVPTPKINLSIPGMAPVAAGALPPTVDVVTRDGRQNKKSKWDKVDGDRRDPVSAVGAHAALLSAANAGAGYTAFAQQRRREAEEKRPSDKKLDRRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="52261" PGL_stop="52674"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52261" e_stop="52674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="52261" e_stop="52674" e_length="414"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52261" stop="52674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582048" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCTATGATGGTTGCTGTGTTTCTCGACAACACACTGGACTACAAGGACAGTGCCAAAGATAGGGGAATGCCATGGTGGGTGAAGTTCAGGACATTTAAGGGTGATAGTAGAAATGAAGAGTTTTACACCCTCCCTTTCAATCTCAACCGCTTCTTTCCTCCTTCATGATCATGTTTGCGATATATCTGGACCAGAAGAGGAAGGATGTGAAAGTGAAATTTGAGAAGAGTTTGATCTCAGGGTTGATCCCTTATGATATATTTGAATCAAAGAACAAACTCTATGTAGGCAGTTGTGATGAAATTCCTAGGAAGTAGACATCAGTTGACATGAATATTATTTTTTCATTTATTTGTAGTCAAAAATGTCAAGGCCTATTTTGGCATAATGAGAAGATTTTCTTATTCCTTAC</gDNA_template>
            <first_frame> W  L  *  W  L  L  C  F  S  T  T  H  W  T  T  R  T  V  P  K  I  G  E  C  H  G  G  *  S  S  G  H  L  R  V  I  V  E  M  K  S  F  T  P  S  L  S  I  S  T  A  S  F  L  L  H  D  H  V  C  D  I  S  G  P  E  E  E  G  C  E  S  E  I  *  E  E  F  D  L  R  V  D  P  L  *  Y  I  *  I  K  E  Q  T  L  C  R  Q  L  *  *  N  S  *  E  V  D  I  S  *  H  E  Y  Y  F  F  I  Y  L  *  S  K  M  S  R  P  I  L  A  *  *  E  D  F  L  I  P  Y </first_frame>
            <second_frame>  G  Y  D  G  C  C  V  S  R  Q  H  T  G  L  Q  G  Q  C  Q  R  *  G  N  A  M  V  G  E  V  Q  D  I  *  G  *  *  *  K  *  R  V  L  H  P  P  F  Q  S  Q  P  L  L  S  S  F  M  I  M  F  A  I  Y  L  D  Q  K  R  K  D  V  K  V  K  F  E  K  S  L  I  S  G  L  I  P  Y  D  I  F  E  S  K  N  K  L  Y  V  G  S  C  D  E  I  P  R  K  *  T  S  V  D  M  N  I  I  F  S  F  I  C  S  Q  K  C  Q  G  L  F  W  H  N  E  K  I  F  L  F  L   </second_frame>
            <third_frame>   A  M  M  V  A  V  F  L  D  N  T  L  D  Y  K  D  S  A  K  D  R  G  M  P  W  W  V  K  F  R  T  F  K  G  D  S  R  N  E  E  F  Y  T  L  P  F  N  L  N  R  F  F  P  P  S  *  S  C  L  R  Y  I  W  T  R  R  G  R  M  *  K  *  N  L  R  R  V  *  S  Q  G  *  S  L  M  I  Y  L  N  Q  R  T  N  S  M  *  A  V  V  M  K  F  L  G  S  R  H  Q  L  T  *  I  L  F  F  H  L  F  V  V  K  N  V  K  A  Y  F  G  I  M  R  R  F  S  Y  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52379" stop="52579"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVLHPPFQSQPLLSSFMIMFAIYLDQKRKDVKVKFEKSLISGLIPYDIFESKNKLYVGSCDEIPRK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="59934" PGL_stop="58023"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59934" e_stop="58023"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="59934" e_stop="58023" e_length="1912"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59934" stop="58829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575023" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58832" stop="58023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604002" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAGATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGACCACATACAGGTATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACGGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTCCTCTGCTTAGAACCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> K  G  L  L  D  I  A  Q  S  E  I  H  H  S  R  T  V  *  L  S  G  *  I  K  H  F  W  R  E  Q  G  A  C  S  L  M  L  G  *  I  E  D  S  G  Q  K  R  L  V  Q  L  A  T  *  L  T  A  D  H  I  Q  V  Y  S  A  R  H  L  W  R  C  G  L  E  K  L  L  I  I  Q  I  *  K  L  L  V  V  R  L  T  I  T  S  V  K  V  S  *  N  Q  E  L  K  R  E  Y  L  W  A  T  E  M  E  *  K  V  S  E  S  G  L  Q  Q  K  R  G  L  L  *  A  G  T  L  S  L  M  K  V  L  C  L  E  P  L  *  S  L  Q  L  R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  L  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  I  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *  L  S  R  M  V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  A  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  R  D  C  S  T  S  H  S  Q  K  Y  T  T  A  E  R  C  S  *  A  D  E  S  N  T  S  G  E  S  K  V  H  A  L  *  C  W  A  R  *  K  I  L  G  R  S  G  *  Y  S  L  L  L  D  *  P  R  T  T  Y  R  Y  T  V  Q  D  T  Y  G  D  V  V  W  K  S  C  *  L  F  K  S  E  S  F  W  L  Y  G  L  L  S  R  Q  *  R  *  V  R  T  K  S  *  K  G  S  I  C  G  L  R  R  W  S  E  R  F  Q  N  L  V  S  S  R  K  E  G  Y  Y  E  Q  E  R  C  L  *  *  K  S  S  A  *  N  H  C  E  A  Y  N  Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  *  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  *  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  *  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  S  A  G  W  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  W  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   G  I  A  R  H  R  T  V  R  N  T  P  Q  Q  N  G  V  A  E  R  M  N  Q  T  L  L  E  R  A  R  C  M  L  S  N  A  G  L  D  R  R  F  W  A  E  A  V  S  T  A  C  Y  L  I  N  R  G  P  H  T  G  I  Q  C  K  T  P  M  E  M  W  S  G  K  A  A  D  Y  S  N  L  K  A  F  G  C  T  A  Y  Y  H  V  S  E  G  K  L  E  P  R  A  K  K  G  V  F  V  G  Y  G  D  G  V  K  G  F  R  I  W  S  P  A  E  K  R  V  I  M  S  R  N  V  V  F  D  E  S  P  L  L  R  T  I  V  K  P  T  T  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  D  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T  Q  P  D  G  F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59932" stop="58025"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1908</number_coding_nucleotides>
                  <number_encoded_amino_acids>636</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="60275" PGL_stop="59977"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60275" e_stop="59977"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="60275" e_stop="59977" e_length="299"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60275" stop="59977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</gDNA_template>
            <first_frame> P  R  V  L  *  T  L  C  F  W  K  T  T  S  Q  Q  V  S  K  G  H  S  *  N  K  R  H  T  *  L  Y  P  F  *  L  L  G  S  M  P  C  *  V  F  G  R  L  Q  I  F  C  V  H  Y  *  *  L  L  K  D  D  L  G  V  H  D  E  A  *  K  *  S  L  P  E  V  Q  G  V  E  N  F  D  G  K  S  N  R  E  E  D  Q  E  V  A  N  *  *  W   </first_frame>
            <second_frame>  L  E  F  C  E  H  C  V  F  G  K  L  H  R  N  K  F  P  K  A  I  H  R  T  K  G  T  L  D  Y  I  H  S  D  C  W  G  P  C  R  V  E  S  L  G  G  C  R  F  F  V  S  I  I  D  D  Y  S  R  M  T  W  V  Y  M  M  K  H  K  S  E  A  F  Q  K  F  K  E  W  K  I  L  M  E  N  Q  T  G  K  K  I  K  R  L  R  T  D  N  G  </second_frame>
            <third_frame>   *  S  F  V  N  I  V  F  L  E  N  Y  I  A  T  S  F  Q  R  P  F  I  E  Q  K  A  H  L  I  I  S  I  L  I  A  G  V  H  A  V  L  S  L  W  E  A  A  D  F  L  C  P  L  L  M  T  T  Q  G  *  L  G  C  T  *  *  S  I  K  V  K  P  S  R  S  S  R  S  G  K  F  *  W  K  I  K  Q  G  R  R  S  R  G  C  E  L  I  M  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60274" stop="59978"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="66629" PGL_stop="65890"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66629" e_stop="65890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="66629" e_stop="65890" e_length="740"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66629" stop="65890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568624" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAAGCCATGTTATGTTTGTCCAAAAGGGTGACTCTGGTTTTCAAAATGGTATTTTAAATTTAGTAGTAATTAACAATCAGTATTGACTTTCATTGGTCTGATTCTATACTTCTTTTCTATTTTTATATGTTGAGGAATTTTCATGGAAAATACTAATGAATTCAACTCTAACATCATCATTGTTTGTCCCTTTCCACCATTTCTCTTGATTGACCCTAAAGATAACAATTGCTTGAATTTTTAATTCAATTGTATTTTTTAAAATCATTTTATGTGTAATGTGGTTTATACCTTAGTGTTTACTGGAACAAACATACTGTATTCTAACATGTACACAACCATGATGAGAAAAATCAATTTCCTTTTCCCTCTCTTAGTTTCAATATGGCATCATTTGCTGATATTATCAGCCACTGCAGAAGTCAATCTCAAAACTGATGAAGCTTCTCTACTTGCTTTGAAATCCTATGTTACTTCCGATACTTACAATATCTTGTCAAGCAACTGGACCTCAACTACTTCTGTTTGCAATTGGATTGGAGTCACCTGCGGCTCTCGCCATCAAAGAGTTATAACCTTGGATATTTCTGATATGGGATTAGTAGGCACCATCCCTCCTCACTTGGGAAATCTGTCCTTTTTGGTTTCTCTCGATATCAGTAGCAACAGCTTCCAAGGAATTTTGCCACGAGAGTTGGCTAATTTGCATAGATTGGAGTTTATAAATGTCACTTCTA</gDNA_template>
            <first_frame> G  K  A  M  L  C  L  S  K  R  V  T  L  V  F  K  M  V  F  *  I  *  *  *  L  T  I  S  I  D  F  H  W  S  D  S  I  L  L  F  Y  F  Y  M  L  R  N  F  H  G  K  Y  *  *  I  Q  L  *  H  H  H  C  L  S  L  S  T  I  S  L  D  *  P  *  R  *  Q  L  L  E  F  L  I  Q  L  Y  F  L  K  S  F  Y  V  *  C  G  L  Y  L  S  V  Y  W  N  K  H  T  V  F  *  H  V  H  N  H  D  E  K  N  Q  F  P  F  P  S  L  S  F  N  M  A  S  F  A  D  I  I  S  H  C  R  S  Q  S  Q  N  *  *  S  F  S  T  C  F  E  I  L  C  Y  F  R  Y  L  Q  Y  L  V  K  Q  L  D  L  N  Y  F  C  L  Q  L  D  W  S  H  L  R  L  S  P  S  K  S  Y  N  L  G  Y  F  *  Y  G  I  S  R  H  H  P  S  S  L  G  K  S  V  L  F  G  F  S  R  Y  Q  *  Q  Q  L  P  R  N  F  A  T  R  V  G  *  F  A  *  I  G  V  Y  K  C  H  F   </first_frame>
            <second_frame>  E  K  P  C  Y  V  C  P  K  G  *  L  W  F  S  K  W  Y  F  K  F  S  S  N  *  Q  S  V  L  T  F  I  G  L  I  L  Y  F  F  S  I  F  I  C  *  G  I  F  M  E  N  T  N  E  F  N  S  N  I  I  I  V  C  P  F  P  P  F  L  L  I  D  P  K  D  N  N  C  L  N  F  *  F  N  C  I  F  *  N  H  F  M  C  N  V  V  Y  T  L  V  F  T  G  T  N  I  L  Y  S  N  M  Y  T  T  M  M  R  K  I  N  F  L  F  P  L  L  V  S  I  W  H  H  L  L  I  L  S  A  T  A  E  V  N  L  K  T  D  E  A  S  L  L  A  L  K  S  Y  V  T  S  D  T  Y  N  I  L  S  S  N  W  T  S  T  T  S  V  C  N  W  I  G  V  T  C  G  S  R  H  Q  R  V  I  T  L  D  I  S  D  M  G  L  V  G  T  I  P  P  H  L  G  N  L  S  F  L  V  S  L  D  I  S  S  N  S  F  Q  G  I  L  P  R  E  L  A  N  L  H  R  L  E  F  I  N  V  T  S  </second_frame>
            <third_frame>   K  S  H  V  M  F  V  Q  K  G  D  S  G  F  Q  N  G  I  L  N  L  V  V  I  N  N  Q  Y  *  L  S  L  V  *  F  Y  T  S  F  L  F  L  Y  V  E  E  F  S  W  K  I  L  M  N  S  T  L  T  S  S  L  F  V  P  F  H  H  F  S  *  L  T  L  K  I  T  I  A  *  I  F  N  S  I  V  F  F  K  I  I  L  C  V  M  W  F  I  P  *  C  L  L  E  Q  T  Y  C  I  L  T  C  T  Q  P  *  *  E  K  S  I  S  F  S  L  S  *  F  Q  Y  G  I  I  C  *  Y  Y  Q  P  L  Q  K  S  I  S  K  L  M  K  L  L  Y  L  L  *  N  P  M  L  L  P  I  L  T  I  S  C  Q  A  T  G  P  Q  L  L  L  F  A  I  G  L  E  S  P  A  A  L  A  I  K  E  L  *  P  W  I  F  L  I  W  D  *  *  A  P  S  L  L  T  W  E  I  C  P  F  W  F  L  S  I  S  V  A  T  A  S  K  E  F  C  H  E  S  W  L  I  C  I  D  W  S  L  *  M  S  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66364" stop="65891"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>474</number_coding_nucleotides>
                  <number_encoded_amino_acids>158</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NHFMCNVVYTLVFTGTNILYSNMYTTMMRKINFLFPLLVSIWHHLLILSATAEVNLKTDEASLLALKSYVTSDTYNILSSNWTSTTSVCNWIGVTCGSRHQRVITLDISDMGLVGTIPPHLGNLSFLVSLDISSNSFQGILPRELANLHRLEFINVTS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="68904" PGL_stop="67445"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68904" e_stop="68081"/>
            <exon e_start="67986" e_stop="67445"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68904" e_stop="68081" e_length="824"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.921">
            <gDNA_intron_boundary i_start="68080" i_stop="67987" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67986" e_stop="67445" e_length="542"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68904" stop="68223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68242" stop="68081"/>
              <exon start="67986" stop="67445"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562626" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGCAGGGTGAAATTCCTTTTAGTGGTCCTTTCAAGAACCTTTCCAGCCTGTCATTCATGTTCAATGAAGCATTGTGTGGTGCTCCAAGATTTCATGTCCCTTCGTGCCCCACTTCTTCAAACCATAGATCAAAGAGGAAGAAGTTACTTCTGATAGTCTTTCCTCTACTCGGAGCTGCTGTGACAATTGTTTTTGTAACATTGGCATTTGTGTGGATGAGGTACAGAAAAGAAGGAAATGTTCCAGTCCAAGCTGATTTGTTAGCTACAAGGGAAAGAATTTCATACTATGAAATCATACAAGCCACAAATGATTTTAGTGAGAGTAATTTCATTGGTTCAGGGAGTTTTGGTTCTGTTTACAAAGGAATTCTCATAAATGGGACTATCATTGCAGTTAAAGTGTTCAACCTACAAGTTGAAGGTGCATTCAAGAGTTTTGAAACAGAATGTGAAGTTCTTCGCAACCTTCGCCATAGGAATCTCACCAAAGTCATTAGCAGTTGCTCCAACCTTGATTTCAAGGCTTTAGTGCTCGAGTACATGCCTAATGGGAGCCTTGAAAAGTGGTTGTATTCACACAACTACTTCTTAGACATCCTTCAAAGACTAAGCATAATGATTGATGTGGCATGTGCATTGGAATATCTCCACCATGGTTGCTCAGCACCTGTGATTCATTGTGATCTGAAGCCTAGCAATGTCTTGCTAGATGAAAACATGGTAGCTCATTTAAGTGACTTTGGCATTTCTAAACTACTCAGTGAAGATGAGAGTGATTTACACACTAAAACCTTAGCAACATTCGGCTACATTGCACCAG : AGTATGGAAGGGAAGGATTGCTGTCGCTAAAATGTGATGTTTATAGTTACGGGATCATGCTGATGGAAACATTCACGAGGAGAAGGCCGAACGATGAAATATTTGATGAAGATCTTAGTTTAAAGAAATGGGTGAGTGATTCACTCCCAGAGGCAACAATCAAAGTTGTAGATGCGAATTTTCTAACACCAGAAGATGAGAAATTCATGGAAAAGATAGATTGTGTAGCATCCATCATGAAAGTGGCACTGGATTGCTCTGCTGAATCTCCTGAAGAAAGGATCTACATGAAAGATGTTGTAGGAACACTACAAAAGATCAAGATTCAACTTCTTTCATGTTCCGCAAGTGCATAAAGACATTTGACTCATGTCACTTGAGGGTATAGAAAGTGTTTGGTTAACTTTTTAGCTGCATACCTAGACTGTTTTCCTTTCTAGCTGCATAAGATATTCCTATTCTTATTGAGATCCTTTGTGAATTTTGGCCTGTTTGGTTCCAAATTGCTTTTTCCTAATTCTCATGAAATAAATTTTATAATC</gDNA_template>
            <first_frame> L  A  G  *  N  S  F  *  W  S  F  Q  E  P  F  Q  P  V  I  H  V  Q  *  S  I  V  W  C  S  K  I  S  C  P  F  V  P  H  F  F  K  P  *  I  K  E  E  E  V  T  S  D  S  L  S  S  T  R  S  C  C  D  N  C  F  C  N  I  G  I  C  V  D  E  V  Q  K  R  R  K  C  S  S  P  S  *  F  V  S  Y  K  G  K  N  F  I  L  *  N  H  T  S  H  K  *  F  *  *  E  *  F  H  W  F  R  E  F  W  F  C  L  Q  R  N  S  H  K  W  D  Y  H  C  S  *  S  V  Q  P  T  S  *  R  C  I  Q  E  F  *  N  R  M  *  S  S  S  Q  P  S  P  *  E  S  H  Q  S  H  *  Q  L  L  Q  P  *  F  Q  G  F  S  A  R  V  H  A  *  W  E  P  *  K  V  V  V  F  T  Q  L  L  L  R  H  P  S  K  T  K  H  N  D  *  C  G  M  C  I  G  I  S  P  P  W  L  L  S  T  C  D  S  L  *  S  E  A  *  Q  C  L  A  R  *  K  H  G  S  S  F  K  *  L  W  H  F  *  T  T  Q  *  R  *  E  *  F  T  H  *  N  L  S  N  I  R  L  H  C  T  R :   V  W  K  G  R  I  A  V  A  K  M  *  C  L  *  L  R  D  H  A  D  G  N  I  H  E  E  K  A  E  R  *  N  I  *  *  R  S  *  F  K  E  M  G  E  *  F  T  P  R  G  N  N  Q  S  C  R  C  E  F  S  N  T  R  R  *  E  I  H  G  K  D  R  L  C  S  I  H  H  E  S  G  T  G  L  L  C  *  I  S  *  R  K  D  L  H  E  R  C  C  R  N  T  T  K  D  Q  D  S  T  S  F  M  F  R  K  C  I  K  T  F  D  S  C  H  L  R  V  *  K  V  F  G  *  L  F  S  C  I  P  R  L  F  S  F  L  A  A  *  D  I  P  I  L  I  E  I  L  C  E  F  W  P  V  W  F  Q  I  A  F  S  *  F  S  *  N  K  F  Y  N  </first_frame>
            <second_frame>  L  Q  G  E  I  P  F  S  G  P  F  K  N  L  S  S  L  S  F  M  F  N  E  A  L  C  G  A  P  R  F  H  V  P  S  C  P  T  S  S  N  H  R  S  K  R  K  K  L  L  L  I  V  F  P  L  L  G  A  A  V  T  I  V  F  V  T  L  A  F  V  W  M  R  Y  R  K  E  G  N  V  P  V  Q  A  D  L  L  A  T  R  E  R  I  S  Y  Y  E  I  I  Q  A  T  N  D  F  S  E  S  N  F  I  G  S  G  S  F  G  S  V  Y  K  G  I  L  I  N  G  T  I  I  A  V  K  V  F  N  L  Q  V  E  G  A  F  K  S  F  E  T  E  C  E  V  L  R  N  L  R  H  R  N  L  T  K  V  I  S  S  C  S  N  L  D  F  K  A  L  V  L  E  Y  M  P  N  G  S  L  E  K  W  L  Y  S  H  N  Y  F  L  D  I  L  Q  R  L  S  I  M  I  D  V  A  C  A  L  E  Y  L  H  H  G  C  S  A  P  V  I  H  C  D  L  K  P  S  N  V  L  L  D  E  N  M  V  A  H  L  S  D  F  G  I  S  K  L  L  S  E  D  E  S  D  L  H  T  K  T  L  A  T  F  G  Y  I  A  P   : E  Y  G  R  E  G  L  L  S  L  K  C  D  V  Y  S  Y  G  I  M  L  M  E  T  F  T  R  R  R  P  N  D  E  I  F  D  E  D  L  S  L  K  K  W  V  S  D  S  L  P  E  A  T  I  K  V  V  D  A  N  F  L  T  P  E  D  E  K  F  M  E  K  I  D  C  V  A  S  I  M  K  V  A  L  D  C  S  A  E  S  P  E  E  R  I  Y  M  K  D  V  V  G  T  L  Q  K  I  K  I  Q  L  L  S  C  S  A  S  A  *  R  H  L  T  H  V  T  *  G  Y  R  K  C  L  V  N  F  L  A  A  Y  L  D  C  F  P  F  *  L  H  K  I  F  L  F  L  L  R  S  F  V  N  F  G  L  F  G  S  K  L  L  F  P  N  S  H  E  I  N  F  I  I </second_frame>
            <third_frame>   C  R  V  K  F  L  L  V  V  L  S  R  T  F  P  A  C  H  S  C  S  M  K  H  C  V  V  L  Q  D  F  M  S  L  R  A  P  L  L  Q  T  I  D  Q  R  G  R  S  Y  F  *  *  S  F  L  Y  S  E  L  L  *  Q  L  F  L  *  H  W  H  L  C  G  *  G  T  E  K  K  E  M  F  Q  S  K  L  I  C  *  L  Q  G  K  E  F  H  T  M  K  S  Y  K  P  Q  M  I  L  V  R  V  I  S  L  V  Q  G  V  L  V  L  F  T  K  E  F  S  *  M  G  L  S  L  Q  L  K  C  S  T  Y  K  L  K  V  H  S  R  V  L  K  Q  N  V  K  F  F  A  T  F  A  I  G  I  S  P  K  S  L  A  V  A  P  T  L  I  S  R  L  *  C  S  S  T  C  L  M  G  A  L  K  S  G  C  I  H  T  T  T  S  *  T  S  F  K  D  *  A  *  *  L  M  W  H  V  H  W  N  I  S  T  M  V  A  Q  H  L  *  F  I  V  I  *  S  L  A  M  S  C  *  M  K  T  W  *  L  I  *  V  T  L  A  F  L  N  Y  S  V  K  M  R  V  I  Y  T  L  K  P  *  Q  H  S  A  T  L  H  Q  :  S  M  E  G  K  D  C  C  R  *  N  V  M  F  I  V  T  G  S  C  *  W  K  H  S  R  G  E  G  R  T  M  K  Y  L  M  K  I  L  V  *  R  N  G  *  V  I  H  S  Q  R  Q  Q  S  K  L  *  M  R  I  F  *  H  Q  K  M  R  N  S  W  K  R  *  I  V  *  H  P  S  *  K  W  H  W  I  A  L  L  N  L  L  K  K  G  S  T  *  K  M  L  *  E  H  Y  K  R  S  R  F  N  F  F  H  V  P  Q  V  H  K  D  I  *  L  M  S  L  E  G  I  E  S  V  W  L  T  F  *  L  H  T  *  T  V  F  L  S  S  C  I  R  Y  S  Y  S  Y  *  D  P  L  *  I  L  A  C  L  V  P  N  C  F  F  L  I  L  M  K  *  I  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68903" stop="68081"/>
                    <exon start="67986" stop="67631"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1176</number_coding_nucleotides>
                  <number_encoded_amino_acids>392</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQGEIPFSGPFKNLSSLSFMFNEALCGAPRFHVPSCPTSSNHRSKRKKLLLIVFPLLGAAVTIVFVTLAFVWMRYRKEGNVPVQADLLATRERISYYEIIQATNDFSESNFIGSGSFGSVYKGILINGTIIAVKVFNLQVEGAFKSFETECEVLRNLRHRNLTKVISSCSNLDFKALVLEYMPNGSLEKWLYSHNYFLDILQRLSIMIDVACALEYLHHGCSAPVIHCDLKPSNVLLDENMVAHLSDFGISKLLSEDESDLHTKTLATFGYIAPEYGREGLLSLKCDVYSYGIMLMETFTRRRPNDEIFDEDLSLKKWVSDSLPEATIKVVDANFLTPEDEKFMEKIDCVASIMKVALDCSAESPEERIYMKDVVGTLQKIKIQLLSCSASA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="75724" PGL_stop="79099"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75724" e_stop="76276"/>
            <exon e_start="77197" e_stop="77220"/>
            <exon e_start="77515" e_stop="77542"/>
            <exon e_start="77620" e_stop="77649"/>
            <exon e_start="77792" e_stop="77836"/>
            <exon e_start="78010" e_stop="78044"/>
            <exon e_start="78731" e_stop="79099"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.811" e_score="0.792"/>
          <exon-intron don_prob="0.000" acc_prob="0.929" e_score="0.607"/>
          <exon-intron don_prob="0.000" acc_prob="0.990" e_score="0.633"/>
          <exon-intron don_prob="0.000" acc_prob="0.870" e_score="0.556"/>
          <exon-intron don_prob="0.647" acc_prob="0.931" e_score="0.457"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75724" e_stop="76276" e_length="553"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.000">
            <gDNA_intron_boundary i_start="76277" i_stop="77196" i_length="920"/>
          </intron>
          <exon e_serial="2" e_score="0.792">
            <gDNA_exon_boundary e_start="77197" e_stop="77220" e_length="24"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.811">
            <gDNA_intron_boundary i_start="77221" i_stop="77514" i_length="294"/>
          </intron>
          <exon e_serial="3" e_score="0.607">
            <gDNA_exon_boundary e_start="77515" e_stop="77542" e_length="28"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.929">
            <gDNA_intron_boundary i_start="77543" i_stop="77619" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.633">
            <gDNA_exon_boundary e_start="77620" e_stop="77649" e_length="30"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="77650" i_stop="77791" i_length="142"/>
          </intron>
          <exon e_serial="5" e_score="0.556">
            <gDNA_exon_boundary e_start="77792" e_stop="77836" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.870">
            <gDNA_intron_boundary i_start="77837" i_stop="78009" i_length="173"/>
          </intron>
          <exon e_serial="6" e_score="0.457">
            <gDNA_exon_boundary e_start="78010" e_stop="78044" e_length="35"/>
          </exon>
          <intron i_serial="6" don_prob="0.647" acc_prob="0.931">
            <gDNA_intron_boundary i_start="78045" i_stop="78730" i_length="686"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="78731" e_stop="79099" e_length="369"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75724" stop="76276"/>
              <exon start="77197" stop="77220"/>
              <exon start="77515" stop="77542"/>
              <exon start="77620" stop="77649"/>
              <exon start="77792" stop="77836"/>
              <exon start="78010" stop="78044"/>
              <exon start="78731" stop="79099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564622" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAGTTGCTGAATCTTCTTCATCCATTCTGTATTCTCTTCTCTTTAATTGCATAAATATCAAATGACTCATTCTCTAACTTTAGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCA : GACATCTATGAATATTGCAGCCTT : TCATGAGATAAGTGCAGATATTACAAAT : TGAATGGGAACTATTGAAAATTGAAATAAG : GCAATGTTGTATTTTTGCCTGAAGTCATTGGATTTGAGTTGCAAA : ACGAGCTGTTCATTGTAAAAACTTTGTTCGACTTG : GACATCTTTCATATTGAGCCTCTCATTAGGAGATTCAGCTGTGCAATTCAATGCCAACTCCAAAATAGAGGTCAGACAACTCAACTTTTTATCAAAATCAATCTCTTCAGGTTGCAATAAGGTGTCATCAATAATATCAGCTGGTGCTACAGGTAGTGAATTACAGACCCAACTCCTCATGTTCAAATTTTCTTGAAACATTTCATCGTATGGCCTTTTCCTTGTGAAAGTTTCCATGAGCATAATGCCGTAACTGTACACATCACATCTTCTAGAAACTAATCCAACTGATCCATACTCTGATTCAGTATTACCAGAGTAATTAGTTTCTTGATGAGCCAGATAAAGAAATGAAAATATTTTACATAT</gDNA_template>
            <first_frame> Q  Q  L  L  N  L  L  H  P  F  C  I  L  F  S  L  I  A  *  I  S  N  D  S  F  S  N  F  S  F  Y  S  S  N  S  I  R  H  W  S  K  N  W  G  F  T  *  G  K  Y  A  I  E  I  I  F  K  V  I  Q  N  S  S  C  A  R  *  W  G  R  A  S  E  A  N  R  Y  Y  S  Q  C  S  *  G  F  E  K  L  F  Q  N  S  F  T  E  G  T  L  W  R  Y  I  I  T  G  W  I  L  C  G  P  D  N  F  S  I  F  W  S  F  R  S  E  *  C  D  C  C  C  S  V  C  L  N  Y  *  I  C  D  A  I  L  L  H  S  T  *  G  D  F  S  D  C  S  F  E  Q  L  Q  D  G  F  Y  L  W  S  V  H  *  C  L  Q  T  C  Q  L  N  *  L  P  H  F  C  S   : R  H  L  *  I  L  Q  P   : F  M  R  *  V  Q  I  L  Q  I :   E  W  E  L  L  K  I  E  I  R :   Q  C  C  I  F  A  *  S  H  W  I  *  V  A  K :   R  A  V  H  C  K  N  F  V  R  L   : G  H  L  S  Y  *  A  S  H  *  E  I  Q  L  C  N  S  M  P  T  P  K  *  R  S  D  N  S  T  F  Y  Q  N  Q  S  L  Q  V  A  I  R  C  H  Q  *  Y  Q  L  V  L  Q  V  V  N  Y  R  P  N  S  S  C  S  N  F  L  E  T  F  H  R  M  A  F  S  L  *  K  F  P  *  A  *  C  R  N  C  T  H  H  I  F  *  K  L  I  Q  L  I  H  T  L  I  Q  Y  Y  Q  S  N  *  F  L  D  E  P  D  K  E  M  K  I  F  Y  I  </first_frame>
            <second_frame>  N  S  C  *  I  F  F  I  H  S  V  F  S  S  L  *  L  H  K  Y  Q  M  T  H  S  L  T  L  A  S  T  A  L  I  R  Y  G  I  G  P  K  I  G  A  L  P  R  A  N  M  P  S  R  S  S  S  R  L  F  R  I  Q  A  V  Q  D  N  G  G  G  P  R  R  L  I  D  I  I  R  N  V  P  E  V  S  R  N  Y  F  K  T  P  S  R  R  A  L  F  G  G  I  S  L  L  G  G  F  Y  V  A  Q  T  I  S  L  S  F  G  A  L  G  V  N  D  V  I  A  A  V  V  C  V  L  I  T  E  Y  V  T  R  F  Y  Y  T  R  P  K  V  T  F  P  I  A  L  L  N  N  F  K  M  G  F  T  Y  G  L  F  I  D  A  F  K  L  A  S  *  I  D  C  H  T  F  V  A  :  D  I  Y  E  Y  C  S  L  :  S  *  D  K  C  R  Y  Y  K   : L  N  G  N  Y  *  K  L  K  *   : G  N  V  V  F  L  P  E  V  I  G  F  E  L  Q   : N  E  L  F  I  V  K  T  L  F  D  L  :  D  I  F  H  I  E  P  L  I  R  R  F  S  C  A  I  Q  C  Q  L  Q  N  R  G  Q  T  T  Q  L  F  I  K  I  N  L  F  R  L  Q  *  G  V  I  N  N  I  S  W  C  Y  R  *  *  I  T  D  P  T  P  H  V  Q  I  F  L  K  H  F  I  V  W  P  F  P  C  E  S  F  H  E  H  N  A  V  T  V  H  I  T  S  S  R  N  *  S  N  *  S  I  L  *  F  S  I  T  R  V  I  S  F  L  M  S  Q  I  K  K  *  K  Y  F  T  Y </second_frame>
            <third_frame>   T  V  A  E  S  S  S  S  I  L  Y  S  L  L  F  N  C  I  N  I  K  *  L  I  L  *  L  *  L  L  Q  L  *  F  D  T  A  L  V  Q  K  L  G  L  Y  L  G  Q  I  C  H  R  D  H  L  Q  G  Y  S  E  F  K  L  C  K  I  M  G  E  G  L  G  G  *  *  I  L  F  A  M  F  L  R  F  R  E  I  I  S  K  L  L  H  G  G  H  S  L  E  V  Y  H  Y  W  V  D  F  M  W  P  R  Q  F  L  Y  L  L  E  L  *  E  *  M  M  *  L  L  L  *  C  V  S  *  L  L  N  M  *  R  D  S  T  T  L  D  L  R  *  L  F  R  L  L  F  *  T  T  S  R  W  V  L  P  M  V  C  S  L  M  P  S  N  L  P  A  E  L  I  A  T  L  L  *  Q :   T  S  M  N  I  A  A  F :   H  E  I  S  A  D  I  T  N  :  *  M  G  T  I  E  N  *  N  K  :  A  M  L  Y  F  C  L  K  S  L  D  L  S  C  K  :  T  S  C  S  L  *  K  L  C  S  T  W :   T  S  F  I  L  S  L  S  L  G  D  S  A  V  Q  F  N  A  N  S  K  I  E  V  R  Q  L  N  F  L  S  K  S  I  S  S  G  C  N  K  V  S  S  I  I  S  A  G  A  T  G  S  E  L  Q  T  Q  L  L  M  F  K  F  S  *  N  I  S  S  Y  G  L  F  L  V  K  V  S  M  S  I  M  P  *  L  Y  T  S  H  L  L  E  T  N  P  T  D  P  Y  S  D  S  V  L  P  E  *  L  V  S  *  *  A  R  *  R  N  E  N  I  L  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75773" stop="76252"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHKYQMTHSLTLASTALIRYGIGPKIGALPRANMPSRSSSRLFRIQAVQDNGGGPRRLIDIIRNVPEVSRNYFKTPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLITEYVTRFYYTRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78028" stop="78044"/>
                    <exon start="78731" stop="78926"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLCSTWTSFILSLSLGDSAVQFNANSKIEVRQLNFLSKSISSGCNKVSSIISAGATGSELQTQLLMFKFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75808" e_stop="76548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="75808" e_stop="76548" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75808" stop="76548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586868" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCTTCTACAGCTCTAATTCGATACGGCATTGGTCCAAAAATTGGGGCTTTACCTAGGGCAAATATGCCATCGAGATCATCTTCAAGGTTATTCAGAATTCAAGCTGTGCAAGATAATGGGGGAGGGCCTCGGAGGCTAATAGATATTATTCGCAATGTTCCTGAGGTTTCGAGAAATTATTTCAAAACTCCTTCACGGAGGGCACTCTTTGGAGGTATATCATTACTGGGTGGATTTTATGTGGCCCAGACAATTTCTCTATCTTTTGGAGCTTTAGGAGTGAATGATGTGATTGCTGCTGTAGTGTGTGTCTTAATTACTGAATATGTGACGCGATTCTACTACACTCGACCTAAGGTGACTTTTCCGATTGCTCTTTTGAACAACTTCAAGATGGGTTTTACCTATGGTCTGTTCATTGATGCCTTCAAACTTGCCAGCTGAATTGATTGCCACACTTTTGTAGCAGTAAGTAATTTTTGCGTGCAGTTTCCCCCTTTTGGGCTGTATTTGTGGATATACAAGTCATAGAAATAGCGAAGTTCTTATTTCAACTGTGTTGATGTTGTCTCATCTTTCAGAAAATTGATGTGAGAGTTACTCATTTCTTGTGTCTTGAAATCTTATAATCACCTCGGTTTGCTTACTGTGCTTTGGGAGTTGGTGGAAGTTAAAGCATTTTACTCAGTACAAGTTCAAGAAGTAAAAAGTTCGTTTTTTACCCCTACCTTGAGCTACCA</gDNA_template>
            <first_frame> S  F  Y  S  S  N  S  I  R  H  W  S  K  N  W  G  F  T  *  G  K  Y  A  I  E  I  I  F  K  V  I  Q  N  S  S  C  A  R  *  W  G  R  A  S  E  A  N  R  Y  Y  S  Q  C  S  *  G  F  E  K  L  F  Q  N  S  F  T  E  G  T  L  W  R  Y  I  I  T  G  W  I  L  C  G  P  D  N  F  S  I  F  W  S  F  R  S  E  *  C  D  C  C  C  S  V  C  L  N  Y  *  I  C  D  A  I  L  L  H  S  T  *  G  D  F  S  D  C  S  F  E  Q  L  Q  D  G  F  Y  L  W  S  V  H  *  C  L  Q  T  C  Q  L  N  *  L  P  H  F  C  S  S  K  *  F  L  R  A  V  S  P  F  W  A  V  F  V  D  I  Q  V  I  E  I  A  K  F  L  F  Q  L  C  *  C  C  L  I  F  Q  K  I  D  V  R  V  T  H  F  L  C  L  E  I  L  *  S  P  R  F  A  Y  C  A  L  G  V  G  G  S  *  S  I  L  L  S  T  S  S  R  S  K  K  F  V  F  Y  P  Y  L  E  L  P </first_frame>
            <second_frame>  A  S  T  A  L  I  R  Y  G  I  G  P  K  I  G  A  L  P  R  A  N  M  P  S  R  S  S  S  R  L  F  R  I  Q  A  V  Q  D  N  G  G  G  P  R  R  L  I  D  I  I  R  N  V  P  E  V  S  R  N  Y  F  K  T  P  S  R  R  A  L  F  G  G  I  S  L  L  G  G  F  Y  V  A  Q  T  I  S  L  S  F  G  A  L  G  V  N  D  V  I  A  A  V  V  C  V  L  I  T  E  Y  V  T  R  F  Y  Y  T  R  P  K  V  T  F  P  I  A  L  L  N  N  F  K  M  G  F  T  Y  G  L  F  I  D  A  F  K  L  A  S  *  I  D  C  H  T  F  V  A  V  S  N  F  C  V  Q  F  P  P  F  G  L  Y  L  W  I  Y  K  S  *  K  *  R  S  S  Y  F  N  C  V  D  V  V  S  S  F  R  K  L  M  *  E  L  L  I  S  C  V  L  K  S  Y  N  H  L  G  L  L  T  V  L  W  E  L  V  E  V  K  A  F  Y  S  V  Q  V  Q  E  V  K  S  S  F  F  T  P  T  L  S  Y   </second_frame>
            <third_frame>   L  L  Q  L  *  F  D  T  A  L  V  Q  K  L  G  L  Y  L  G  Q  I  C  H  R  D  H  L  Q  G  Y  S  E  F  K  L  C  K  I  M  G  E  G  L  G  G  *  *  I  L  F  A  M  F  L  R  F  R  E  I  I  S  K  L  L  H  G  G  H  S  L  E  V  Y  H  Y  W  V  D  F  M  W  P  R  Q  F  L  Y  L  L  E  L  *  E  *  M  M  *  L  L  L  *  C  V  S  *  L  L  N  M  *  R  D  S  T  T  L  D  L  R  *  L  F  R  L  L  F  *  T  T  S  R  W  V  L  P  M  V  C  S  L  M  P  S  N  L  P  A  E  L  I  A  T  L  L  *  Q  *  V  I  F  A  C  S  F  P  L  L  G  C  I  C  G  Y  T  S  H  R  N  S  E  V  L  I  S  T  V  L  M  L  S  H  L  S  E  N  *  C  E  S  Y  S  F  L  V  S  *  N  L  I  I  T  S  V  C  L  L  C  F  G  S  W  W  K  L  K  H  F  T  Q  Y  K  F  K  K  *  K  V  R  F  L  P  L  P  *  A  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75809" stop="76252"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASTALIRYGIGPKIGALPRANMPSRSSSRLFRIQAVQDNGGGPRRLIDIIRNVPEVSRNYFKTPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLITEYVTRFYYTRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="82354" PGL_stop="82082"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82354" e_stop="82331"/>
            <exon e_start="82157" e_stop="82082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82354" e_stop="82331" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.989">
            <gDNA_intron_boundary i_start="82330" i_stop="82158" i_length="173"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82157" e_stop="82082" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82354" stop="82331"/>
              <exon start="82157" stop="82082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600153" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTTGGGGGAAATAAATTGCGAG : GCACAATTCCAGCAAATATTGGTAATTTACGAAAGTTGCAGCAACTACAATTGGAGAACAATTACATGGTGGGTTC</gDNA_template>
            <first_frame> T  L  G  E  I  N  C  E  :  A  Q  F  Q  Q  I  L  V  I  Y  E  S  C  S  N  Y  N  W  R  T  I  T  W  W  V  </first_frame>
            <second_frame>  P  W  G  K  *  I  A  R :   H  N  S  S  K  Y  W  *  F  T  K  V  A  A  T  T  I  G  E  Q  L  H  G  G  F </second_frame>
            <third_frame>   L  G  G  N  K  L  R   : G  T  I  P  A  N  I  G  N  L  R  K  L  Q  Q  L  Q  L  E  N  N  Y  M  V  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0111M05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="103727" PGL_stop="104081"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103727" e_stop="104081"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="103727" e_stop="104081" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103727" stop="104081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGCAAAAAAAGTTGCATTAGCAATTGGAAATTCCACCATTGTGACAAATGCACATTAAACTGGCTAGTTTTCTTACTACAGATAGCAACTCAAAAGTACATATTTTGGACCATAATGAGGCCAATTGCTAAACATTAAAATTTCTAATTTCATGCTAGATTCGATACCGGACTATCATAGGAATGTTTATGGAACAGTAGAGACAAGGAAAAGTAGAATATAATATGTTGGAATTGCTACATTTACTTCAGTTCAATCTTGCTCTTACTGGATTTGAATCCTTCCTCTTCCTTTTCAGTTGATTGCCGACACGCCTGAACCCCTTAATTGATACAAGGCTCTGAGTATAGTTG</gDNA_template>
            <first_frame> R  A  K  K  V  A  L  A  I  G  N  S  T  I  V  T  N  A  H  *  T  G  *  F  S  Y  Y  R  *  Q  L  K  S  T  Y  F  G  P  *  *  G  Q  L  L  N  I  K  I  S  N  F  M  L  D  S  I  P  D  Y  H  R  N  V  Y  G  T  V  E  T  R  K  S  R  I  *  Y  V  G  I  A  T  F  T  S  V  Q  S  C  S  Y  W  I  *  I  L  P  L  P  F  Q  L  I  A  D  T  P  E  P  L  N  *  Y  K  A  L  S  I  V  </first_frame>
            <second_frame>  E  Q  K  K  L  H  *  Q  L  E  I  P  P  L  *  Q  M  H  I  K  L  A  S  F  L  T  T  D  S  N  S  K  V  H  I  L  D  H  N  E  A  N  C  *  T  L  K  F  L  I  S  C  *  I  R  Y  R  T  I  I  G  M  F  M  E  Q  *  R  Q  G  K  V  E  Y  N  M  L  E  L  L  H  L  L  Q  F  N  L  A  L  T  G  F  E  S  F  L  F  L  F  S  *  L  P  T  R  L  N  P  L  I  D  T  R  L  *  V  *  L </second_frame>
            <third_frame>   S  K  K  S  C  I  S  N  W  K  F  H  H  C  D  K  C  T  L  N  W  L  V  F  L  L  Q  I  A  T  Q  K  Y  I  F  W  T  I  M  R  P  I  A  K  H  *  N  F  *  F  H  A  R  F  D  T  G  L  S  *  E  C  L  W  N  S  R  D  K  E  K  *  N  I  I  C  W  N  C  Y  I  Y  F  S  S  I  L  L  L  L  D  L  N  P  S  S  S  F  S  V  D  C  R  H  A  *  T  P  *  L  I  Q  G  S  E  Y  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0111M05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="110732" PGL_stop="111901"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110732" e_stop="110925"/>
            <exon e_start="111143" e_stop="111901"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.960" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110732" e_stop="110925" e_length="194"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.960">
            <gDNA_intron_boundary i_start="110926" i_stop="111142" i_length="217"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="111143" e_stop="111901" e_length="759"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110732" stop="110925"/>
              <exon start="111143" stop="111901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCAACACAGCCCTTGAATTTGGTGAATGAAGAGTATGTAAGCAATGCAAATGACCCATGATAGTTGGTGACCACAAAATTTTGAAATGCAGTTATCACTTCTTCCGGGAAAGCTATTATGAAGAACTCCTCTATACTCCAAACAAACGAGGCAAGAACAAAATTTCCATCCAAGTCCTGTGCAATCCAGCAA : GGTCGTCATTGTGTACAGGGAACATCTTGTACTGCTCTATGGCAGGGTTCCATATGCAAATCATTCGACCGGAAGCAATAGTAGTAACTAAACAGATCAAGCCATTGATTGAACCTATGACAGTATAATCGGTCGTACAGGGTTCATTAAGCTTTATCAAGTTGCCAGGATTTTGTATATGGATCAAACGATTTATCTCCCCAGTCTGAACAAAGATACAATGGTTATCAGGGATTGAACTAAACCTCTTGCTATACAGATTGATAAACCAGGGGCTTGAAATCAGCATGGAATAGTCCTTATATAAGCACTTCAATCGCATCAGAGTTTTGACTGGTAATCTTGAAAAAATAACCCCAAGAATCTCATCGTTAAGACCCGGAATACCACCGGTAATTCGTCTTGCATTATTCATCTTATAAGGAAAATGGAGATTCTATTTCTGGTTGAGACAATCAATCAAACAGTTTTGAATGCAGAAAGTAGAGTATATTTCGCCCAAATCTAACTAAAAATCTTCAAGAAATTGCTGTGATTGAAGCACTCACCTTGAGAATCATGAGAGGCAGAAATCCAAAACCCAAAGAAGAAGAAACACTCAACACACTCTCTCTCCAGTGGAAACGATTATTTTTAACTGATTTTTTGCTTCTCAACTGATCTTTCTCTTTATTTATAGGGGCAGGAGACGTTTTTGACATGGAAAGCCAACTAAGCATTTCTGTGGATTAGTATATATAAATTCTATATTTACATCTT</gDNA_template>
            <first_frame> H  Q  H  S  P  *  I  W  *  M  K  S  M  *  A  M  Q  M  T  H  D  S  W  *  P  Q  N  F  E  M  Q  L  S  L  L  P  G  K  L  L  *  R  T  P  L  Y  S  K  Q  T  R  Q  E  Q  N  F  H  P  S  P  V  Q  S  S  K :   V  V  I  V  Y  R  E  H  L  V  L  L  Y  G  R  V  P  Y  A  N  H  S  T  G  S  N  S  S  N  *  T  D  Q  A  I  D  *  T  Y  D  S  I  I  G  R  T  G  F  I  K  L  Y  Q  V  A  R  I  L  Y  M  D  Q  T  I  Y  L  P  S  L  N  K  D  T  M  V  I  R  D  *  T  K  P  L  A  I  Q  I  D  K  P  G  A  *  N  Q  H  G  I  V  L  I  *  A  L  Q  S  H  Q  S  F  D  W  *  S  *  K  N  N  P  K  N  L  I  V  K  T  R  N  T  T  G  N  S  S  C  I  I  H  L  I  R  K  M  E  I  L  F  L  V  E  T  I  N  Q  T  V  L  N  A  E  S  R  V  Y  F  A  Q  I  *  L  K  I  F  K  K  L  L  *  L  K  H  S  P  *  E  S  *  E  A  E  I  Q  N  P  K  K  K  K  H  S  T  H  S  L  S  S  G  N  D  Y  F  *  L  I  F  C  F  S  T  D  L  S  L  Y  L  *  G  Q  E  T  F  L  T  W  K  A  N  *  A  F  L  W  I  S  I  Y  K  F  Y  I  Y  I   </first_frame>
            <second_frame>  I  N  T  A  L  E  F  G  E  *  R  V  C  K  Q  C  K  *  P  M  I  V  G  D  H  K  I  L  K  C  S  Y  H  F  F  R  E  S  Y  Y  E  E  L  L  Y  T  P  N  K  R  G  K  N  K  I  S  I  Q  V  L  C  N  P  A   : R  S  S  L  C  T  G  N  I  L  Y  C  S  M  A  G  F  H  M  Q  I  I  R  P  E  A  I  V  V  T  K  Q  I  K  P  L  I  E  P  M  T  V  *  S  V  V  Q  G  S  L  S  F  I  K  L  P  G  F  C  I  W  I  K  R  F  I  S  P  V  *  T  K  I  Q  W  L  S  G  I  E  L  N  L  L  L  Y  R  L  I  N  Q  G  L  E  I  S  M  E  *  S  L  Y  K  H  F  N  R  I  R  V  L  T  G  N  L  E  K  I  T  P  R  I  S  S  L  R  P  G  I  P  P  V  I  R  L  A  L  F  I  L  *  G  K  W  R  F  Y  F  W  L  R  Q  S  I  K  Q  F  *  M  Q  K  V  E  Y  I  S  P  K  S  N  *  K  S  S  R  N  C  C  D  *  S  T  H  L  E  N  H  E  R  Q  K  S  K  T  Q  R  R  R  N  T  Q  H  T  L  S  P  V  E  T  I  I  F  N  *  F  F  A  S  Q  L  I  F  L  F  I  Y  R  G  R  R  R  F  *  H  G  K  P  T  K  H  F  C  G  L  V  Y  I  N  S  I  F  T  S  </second_frame>
            <third_frame>   S  T  Q  P  L  N  L  V  N  E  E  Y  V  S  N  A  N  D  P  *  *  L  V  T  T  K  F  *  N  A  V  I  T  S  S  G  K  A  I  M  K  N  S  S  I  L  Q  T  N  E  A  R  T  K  F  P  S  K  S  C  A  I  Q  Q  :  G  R  H  C  V  Q  G  T  S  C  T  A  L  W  Q  G  S  I  C  K  S  F  D  R  K  Q  *  *  *  L  N  R  S  S  H  *  L  N  L  *  Q  Y  N  R  S  Y  R  V  H  *  A  L  S  S  C  Q  D  F  V  Y  G  S  N  D  L  S  P  Q  S  E  Q  R  Y  N  G  Y  Q  G  L  N  *  T  S  C  Y  T  D  *  *  T  R  G  L  K  S  A  W  N  S  P  Y  I  S  T  S  I  A  S  E  F  *  L  V  I  L  K  K  *  P  Q  E  S  H  R  *  D  P  E  Y  H  R  *  F  V  L  H  Y  S  S  Y  K  E  N  G  D  S  I  S  G  *  D  N  Q  S  N  S  F  E  C  R  K  *  S  I  F  R  P  N  L  T  K  N  L  Q  E  I  A  V  I  E  A  L  T  L  R  I  M  R  G  R  N  P  K  P  K  E  E  E  T  L  N  T  L  S  L  Q  W  K  R  L  F  L  T  D  F  L  L  L  N  *  S  F  S  L  F  I  G  A  G  D  V  F  D  M  E  S  Q  L  S  I  S  V  D  *  Y  I  *  I  L  Y  L  H  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110787" stop="110925"/>
                    <exon start="111143" stop="111270"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMIVGDHKILKCSYHFFRESYYEELLYTPNKRGKNKISIQVLCNPARSSLCTGNILYCSMAGFHMQIIRPEAIVVTKQIKPLIEPMTV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="117106" PGL_stop="117949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117106" e_stop="117117"/>
            <exon e_start="117202" e_stop="117949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.728" acc_prob="0.997" e_score="0.750"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.750">
            <gDNA_exon_boundary e_start="117106" e_stop="117117" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.728" acc_prob="0.997">
            <gDNA_intron_boundary i_start="117118" i_stop="117201" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="117202" e_stop="117949" e_length="748"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117106" stop="117117"/>
              <exon start="117202" stop="117949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600873" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGCCTGATGG : GCGTACTTCCAGATGAAATCGGTAACCTTCAAGAGTTGTTGATGCTGAAGTTGGATTTCAATGACTTTAGTGGGTCGATCCCTGTTGGTATATTTAATGGCTCAACTCTTGTATCTATTACACTCACACAAAACCGCATTTCAGGTAATCTTCCCAACACTATAGGCAGGGGGTCACCCAATCTTGAACGAATTTTTCTAGGTGCAAATAACATTGATGGTCTTTTACCTAGTTCCATTTCAAATTTGTCTAAGCTTACTGTACTCGAACTTAGTGCAAATGCACTCACAGGTTCAATTCCTGACTTTCTAGGAAACTTAGGACTTATTGAAATTCTCAACTTGCAAGGTAACTTCTTCACTAGTGACTCTTCAATGTTGAGTTTTATTACTCCTTTGGCCAATTGTAAACACTTAAGAGAACTGATATTGTCTATCAATCCCCTAAATGCAATACTTCCAAAATCCATAGGGAATCTTTCTTCTCTTCAGACGTTTGAGGCAATAGGTTGTAATCTCAAAGGCCATATTCCAAATGAAATTGGAAATTTGAGAAATTTATCTTATTTGAAGCTGGATAAAAATGACTTTACTGGAATTGTCCCGACGACAATAAGTTCTTTGGAAAACTTCAACAGTTTTCACTTGGTACAAACAGAATAAGTGGTCCTTTCCCAATTGTTGTATGTGAGCTACCCAACTTGGGCTTGCTAAACCTTTCACAAAACCAAATGTGGGGAAATATTCCT</gDNA_template>
            <first_frame> I  A  *  W  :  A  Y  F  Q  M  K  S  V  T  F  K  S  C  *  C  *  S  W  I  S  M  T  L  V  G  R  S  L  L  V  Y  L  M  A  Q  L  L  Y  L  L  H  S  H  K  T  A  F  Q  V  I  F  P  T  L  *  A  G  G  H  P  I  L  N  E  F  F  *  V  Q  I  T  L  M  V  F  Y  L  V  P  F  Q  I  C  L  S  L  L  Y  S  N  L  V  Q  M  H  S  Q  V  Q  F  L  T  F  *  E  T  *  D  L  L  K  F  S  T  C  K  V  T  S  S  L  V  T  L  Q  C  *  V  L  L  L  L  W  P  I  V  N  T  *  E  N  *  Y  C  L  S  I  P  *  M  Q  Y  F  Q  N  P  *  G  I  F  L  L  F  R  R  L  R  Q  *  V  V  I  S  K  A  I  F  Q  M  K  L  E  I  *  E  I  Y  L  I  *  S  W  I  K  M  T  L  L  E  L  S  R  R  Q  *  V  L  W  K  T  S  T  V  F  T  W  Y  K  Q  N  K  W  S  F  P  N  C  C  M  *  A  T  Q  L  G  L  A  K  P  F  T  K  P  N  V  G  K  Y  S  </first_frame>
            <second_frame>  *  P  D  G :   R  T  S  R  *  N  R  *  P  S  R  V  V  D  A  E  V  G  F  Q  *  L  *  W  V  D  P  C  W  Y  I  *  W  L  N  S  C  I  Y  Y  T  H  T  K  P  H  F  R  *  S  S  Q  H  Y  R  Q  G  V  T  Q  S  *  T  N  F  S  R  C  K  *  H  *  W  S  F  T  *  F  H  F  K  F  V  *  A  Y  C  T  R  T  *  C  K  C  T  H  R  F  N  S  *  L  S  R  K  L  R  T  Y  *  N  S  Q  L  A  R  *  L  L  H  *  *  L  F  N  V  E  F  Y  Y  S  F  G  Q  L  *  T  L  K  R  T  D  I  V  Y  Q  S  P  K  C  N  T  S  K  I  H  R  E  S  F  F  S  S  D  V  *  G  N  R  L  *  S  Q  R  P  Y  S  K  *  N  W  K  F  E  K  F  I  L  F  E  A  G  *  K  *  L  Y  W  N  C  P  D  D  N  K  F  F  G  K  L  Q  Q  F  S  L  G  T  N  R  I  S  G  P  F  P  I  V  V  C  E  L  P  N  L  G  L  L  N  L  S  Q  N  Q  M  W  G  N  I  P </second_frame>
            <third_frame>   S  L  M   : G  V  L  P  D  E  I  G  N  L  Q  E  L  L  M  L  K  L  D  F  N  D  F  S  G  S  I  P  V  G  I  F  N  G  S  T  L  V  S  I  T  L  T  Q  N  R  I  S  G  N  L  P  N  T  I  G  R  G  S  P  N  L  E  R  I  F  L  G  A  N  N  I  D  G  L  L  P  S  S  I  S  N  L  S  K  L  T  V  L  E  L  S  A  N  A  L  T  G  S  I  P  D  F  L  G  N  L  G  L  I  E  I  L  N  L  Q  G  N  F  F  T  S  D  S  S  M  L  S  F  I  T  P  L  A  N  C  K  H  L  R  E  L  I  L  S  I  N  P  L  N  A  I  L  P  K  S  I  G  N  L  S  S  L  Q  T  F  E  A  I  G  C  N  L  K  G  H  I  P  N  E  I  G  N  L  R  N  L  S  Y  L  K  L  D  K  N  D  F  T  G  I  V  P  T  T  I  S  S  L  E  N  F  N  S  F  H  L  V  Q  T  E  *  V  V  L  S  Q  L  L  Y  V  S  Y  P  T  W  A  C  *  T  F  H  K  T  K  C  G  E  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117108" stop="117117"/>
                    <exon start="117202" stop="117863"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLMGVLPDEIGNLQELLMLKLDFNDFSGSIPVGIFNGSTLVSITLTQNRISGNLPNTIGRGSPNLERIFLGANNIDGLLPSSISNLSKLTVLELSANALTGSIPDFLGNLGLIEILNLQGNFFTSDSSMLSFITPLANCKHLRELILSINPLNAILPKSIGNLSSLQTFEAIGCNLKGHIPNEIGNLRNLSYLKLDKNDFTGIVPTTISSLENFNSFHLVQTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="118323" PGL_stop="118930"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118323" e_stop="118930"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="118323" e_stop="118930" e_length="608"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118323" stop="118930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598995" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACTCAAGCAACTACACTCCTTTAATGTCTCATTCAACAGGTTACACGGGGAAATCCCGAGTGGTGGACCTTTTCTTAATCTCCCTTACCAGTCTTTCTTGTCGAATGAAGGATTGTGTGGTAATCCTCAAAAGCATGTCCCAGCTTGTCGTTCAAATTCAAAGAATCATTCCAATTCAAAGAAACGAAGAATAATATGGATTGTAGTTGTCTCTTCAGTTATCTCTATTATAGGGCTTGCTTCAGCAATAATTTTCGTGTTAATGCGACGTCAGGGTAAAGTAATCAAAGCTGAAGATGAGTGGTCTCCTGAGGTAGCACCACAGAGATTTTCTTACTATGAACTTCAAAGAGCAACTCAGGGGTTTGATGAAAATAACTTGCTAGGTAGTGGAGGTTTTGGTTCTGTTTTTAAAGGGACGTTGGCAGATGGGATGATACTAGCTGTCAAAGTTTTTAATGTGCAGATGGAAGGTACATTTCAAACCTTTGATAGAGAATGTGAAATCTTGAGGAATCTTCGTCACAGAAATCTCACAAAGATCATTAGCAGCTGTTGTAACTTGGATTTTAAAGCATTGGTACTTGAGTACATGCCAAATGGGAGC</gDNA_template>
            <first_frame> H  S  S  N  Y  T  P  L  M  S  H  S  T  G  Y  T  G  K  S  R  V  V  D  L  F  L  I  S  L  T  S  L  S  C  R  M  K  D  C  V  V  I  L  K  S  M  S  Q  L  V  V  Q  I  Q  R  I  I  P  I  Q  R  N  E  E  *  Y  G  L  *  L  S  L  Q  L  S  L  L  *  G  L  L  Q  Q  *  F  S  C  *  C  D  V  R  V  K  *  S  K  L  K  M  S  G  L  L  R  *  H  H  R  D  F  L  T  M  N  F  K  E  Q  L  R  G  L  M  K  I  T  C  *  V  V  E  V  L  V  L  F  L  K  G  R  W  Q  M  G  *  Y  *  L  S  K  F  L  M  C  R  W  K  V  H  F  K  P  L  I  E  N  V  K  S  *  G  I  F  V  T  E  I  S  Q  R  S  L  A  A  V  V  T  W  I  L  K  H  W  Y  L  S  T  C  Q  M  G   </first_frame>
            <second_frame>  T  Q  A  T  T  L  L  *  C  L  I  Q  Q  V  T  R  G  N  P  E  W  W  T  F  S  *  S  P  L  P  V  F  L  V  E  *  R  I  V  W  *  S  S  K  A  C  P  S  L  S  F  K  F  K  E  S  F  Q  F  K  E  T  K  N  N  M  D  C  S  C  L  F  S  Y  L  Y  Y  R  A  C  F  S  N  N  F  R  V  N  A  T  S  G  *  S  N  Q  S  *  R  *  V  V  S  *  G  S  T  T  E  I  F  L  L  *  T  S  K  S  N  S  G  V  *  *  K  *  L  A  R  *  W  R  F  W  F  C  F  *  R  D  V  G  R  W  D  D  T  S  C  Q  S  F  *  C  A  D  G  R  Y  I  S  N  L  *  *  R  M  *  N  L  E  E  S  S  S  Q  K  S  H  K  D  H  *  Q  L  L  *  L  G  F  *  S  I  G  T  *  V  H  A  K  W  E  </second_frame>
            <third_frame>   L  K  Q  L  H  S  F  N  V  S  F  N  R  L  H  G  E  I  P  S  G  G  P  F  L  N  L  P  Y  Q  S  F  L  S  N  E  G  L  C  G  N  P  Q  K  H  V  P  A  C  R  S  N  S  K  N  H  S  N  S  K  K  R  R  I  I  W  I  V  V  V  S  S  V  I  S  I  I  G  L  A  S  A  I  I  F  V  L  M  R  R  Q  G  K  V  I  K  A  E  D  E  W  S  P  E  V  A  P  Q  R  F  S  Y  Y  E  L  Q  R  A  T  Q  G  F  D  E  N  N  L  L  G  S  G  G  F  G  S  V  F  K  G  T  L  A  D  G  M  I  L  A  V  K  V  F  N  V  Q  M  E  G  T  F  Q  T  F  D  R  E  C  E  I  L  R  N  L  R  H  R  N  L  T  K  I  I  S  S  C  C  N  L  D  F  K  A  L  V  L  E  Y  M  P  N  G  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118325" stop="118930"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKQLHSFNVSFNRLHGEIPSGGPFLNLPYQSFLSNEGLCGNPQKHVPACRSNSKNHSNSKKRRIIWIVVVSSVISIIGLASAIIFVLMRRQGKVIKAEDEWSPEVAPQRFSYYELQRATQGFDENNLLGSGGFGSVFKGTLADGMILAVKVFNVQMEGTFQTFDRECEILRNLRHRNLTKIISSCCNLDFKALVLEYMPNGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="136840" PGL_stop="135379"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136840" e_stop="136791"/>
            <exon e_start="136705" e_stop="136367"/>
            <exon e_start="135648" e_stop="135379"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.857" acc_prob="0.939" e_score="0.980"/>
          <exon-intron don_prob="0.847" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="136840" e_stop="136791" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.857" acc_prob="0.939">
            <gDNA_intron_boundary i_start="136790" i_stop="136706" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="136705" e_stop="136367" e_length="339"/>
          </exon>
          <intron i_serial="2" don_prob="0.847" acc_prob="0.987">
            <gDNA_intron_boundary i_start="136366" i_stop="135649" i_length="718"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="135648" e_stop="135379" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136840" stop="136791"/>
              <exon start="136705" stop="136367"/>
              <exon start="135648" stop="135379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574516" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTGTTTGTTGGGTGCATTGGTACAGATCTCGTGTCCTCACAGGATATG : TGCAACACGATTGTGAGTTCGCTGCTGGCCACCTGAAGAGATTTTCATTTCGTGAACTGCAAATTGCAACTGCAAATTTCAGCTCTAAGAACATACTAGGACAAGGTGGATTTGGAGTGGTCTACAAAGGATACCTTCCAAATAGGACAGTAGTGGCTGTCAAAAGATTGAGAGATCCAACTTTCACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAGATGATAGGCTTGGCTGTGCATCGGAACCTTCTACGTCTGTATGGATTCTGTACGACTCCCGAGGAAAGATTACTTATTTACCCTTATATGCCAAATGGGAGCGTTGCCGATTGCTTGAGAG : ACAATGGACGGGATAAACCGTTTTTGGATTGGAGAAAGCGCATGCATATAGCTCTTGGAGCTGCCAGAGGTCTTCTGTATTTGCATGAACAGTGTAATCCTAAAATAATTCACAGAGATGTTAAGGCAGCTAATATTCTGCTTGATGAAAGTTTTGAAGCTGTTGTTGGTGATTTTGGTCTTGCTAAGCTTTTAGACTGTAGAGATTCACATGTTACAACTGCAGTTCGTGGTACTATAGGTCATATAGCCCCAGAGTATCTATCAACTG</gDNA_template>
            <first_frame> S  C  L  L  G  A  L  V  Q  I  S  C  P  H  R  I  C :   A  T  R  L  *  V  R  C  W  P  P  E  E  I  F  I  S  *  T  A  N  C  N  C  K  F  Q  L  *  E  H  T  R  T  R  W  I  W  S  G  L  Q  R  I  P  S  K  *  D  S  S  G  C  Q  K  I  E  R  S  N  F  H  W  R  S  A  V  S  N  R  S  *  D  D  R  L  G  C  A  S  E  P  S  T  S  V  W  I  L  Y  D  S  R  G  K  I  T  Y  L  P  L  Y  A  K  W  E  R  C  R  L  L  E  R :   Q  W  T  G  *  T  V  F  G  L  E  K  A  H  A  Y  S  S  W  S  C  Q  R  S  S  V  F  A  *  T  V  *  S  *  N  N  S  Q  R  C  *  G  S  *  Y  S  A  *  *  K  F  *  S  C  C  W  *  F  W  S  C  *  A  F  R  L  *  R  F  T  C  Y  N  C  S  S  W  Y  Y  R  S  Y  S  P  R  V  S  I  N   </first_frame>
            <second_frame>  L  V  C  W  V  H  W  Y  R  S  R  V  L  T  G  Y   : V  Q  H  D  C  E  F  A  A  G  H  L  K  R  F  S  F  R  E  L  Q  I  A  T  A  N  F  S  S  K  N  I  L  G  Q  G  G  F  G  V  V  Y  K  G  Y  L  P  N  R  T  V  V  A  V  K  R  L  R  D  P  T  F  T  G  E  V  Q  F  Q  T  E  V  E  M  I  G  L  A  V  H  R  N  L  L  R  L  Y  G  F  C  T  T  P  E  E  R  L  L  I  Y  P  Y  M  P  N  G  S  V  A  D  C  L  R   : D  N  G  R  D  K  P  F  L  D  W  R  K  R  M  H  I  A  L  G  A  A  R  G  L  L  Y  L  H  E  Q  C  N  P  K  I  I  H  R  D  V  K  A  A  N  I  L  L  D  E  S  F  E  A  V  V  G  D  F  G  L  A  K  L  L  D  C  R  D  S  H  V  T  T  A  V  R  G  T  I  G  H  I  A  P  E  Y  L  S  T  </second_frame>
            <third_frame>   L  F  V  G  C  I  G  T  D  L  V  S  S  Q  D  M  :  C  N  T  I  V  S  S  L  L  A  T  *  R  D  F  H  F  V  N  C  K  L  Q  L  Q  I  S  A  L  R  T  Y  *  D  K  V  D  L  E  W  S  T  K  D  T  F  Q  I  G  Q  *  W  L  S  K  D  *  E  I  Q  L  S  L  E  K  C  S  F  K  Q  K  L  R  *  *  A  W  L  C  I  G  T  F  Y  V  C  M  D  S  V  R  L  P  R  K  D  Y  L  F  T  L  I  C  Q  M  G  A  L  P  I  A  *  E  :  T  M  D  G  I  N  R  F  W  I  G  E  S  A  C  I  *  L  L  E  L  P  E  V  F  C  I  C  M  N  S  V  I  L  K  *  F  T  E  M  L  R  Q  L  I  F  C  L  M  K  V  L  K  L  L  L  V  I  L  V  L  L  S  F  *  T  V  E  I  H  M  L  Q  L  Q  F  V  V  L  *  V  I  *  P  Q  S  I  Y  Q  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136839" stop="136791"/>
                    <exon start="136705" stop="136367"/>
                    <exon start="135648" stop="135380"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVCWVHWYRSRVLTGYVQHDCEFAAGHLKRFSFRELQIATANFSSKNILGQGGFGVVYKGYLPNRTVVAVKRLRDPTFTGEVQFQTEVEMIGLAVHRNLLRLYGFCTTPEERLLIYPYMPNGSVADCLRDNGRDKPFLDWRKRMHIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDCRDSHVTTAVRGTIGHIAPEYLST</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="139297" PGL_stop="138037"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139297" e_stop="139117"/>
            <exon e_start="138842" e_stop="138710"/>
            <exon e_start="138613" e_stop="138542"/>
            <exon e_start="138319" e_stop="138176"/>
            <exon e_start="138073" e_stop="138037"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.981" e_score="0.994"/>
          <exon-intron don_prob="0.734" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="139297" e_stop="139117" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.981">
            <gDNA_intron_boundary i_start="139116" i_stop="138843" i_length="274"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="138842" e_stop="138710" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.734" acc_prob="0.998">
            <gDNA_intron_boundary i_start="138709" i_stop="138614" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="138613" e_stop="138542" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="138541" i_stop="138320" i_length="222"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="138319" e_stop="138176" e_length="144"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="138175" i_stop="138074" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="138073" e_stop="138037" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139297" stop="139117"/>
              <exon start="138842" stop="138710"/>
              <exon start="138613" stop="138542"/>
              <exon start="138319" stop="138176"/>
              <exon start="138073" stop="138037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATGATGAATTCTAAAAAGGACCTTTTTCTGAAAGCTCTGCACCAAAATCTTTCTTTTGGGTAATTAGCTTTTTGGATCCAAATGGTAACTTTGCTACTCGTTTTCTCATTTCTTCATTGGGTGGCCACTACTCCAGTTTCCATGGGTTTTCTTTCACCTAAAGGTGTCAACTATGAAG : TGGCAGCATTGATGTCTATGAAGAATAAAATGAGAGATGAATATCATGTGTTAGATGGATGGGATATAAATTCTGTTGATCCTTGTACATGGTACATGGTTGGTTGTTCTTCAGAAGGCTTTGTTATTTCTCT : TGAAATGGCGAGTATGGGATTATCTGGCACACTTTCGCCTAGTATTGGGAATTTAACTCATCTTCGGACGAT : GTTGTTGCAGAATAATCATTTATCTGGTCCGATTCCTGCTGAAATTGGACAGCTCACTGAACTGCTGACCCTTGATTTGTCTGGTAATCAGTTTGATGGAGGAATTCCTAGGGCGTTGGGTCGCCTGGTTTATTTAAATTACTT : GAGGCTTAGCAGGAACAGATTGTCTGGTCAAATTCCT</gDNA_template>
            <first_frame> T  M  M  N  S  K  K  D  L  F  L  K  A  L  H  Q  N  L  S  F  G  *  L  A  F  W  I  Q  M  V  T  L  L  L  V  F  S  F  L  H  W  V  A  T  T  P  V  S  M  G  F  L  S  P  K  G  V  N  Y  E   : V  A  A  L  M  S  M  K  N  K  M  R  D  E  Y  H  V  L  D  G  W  D  I  N  S  V  D  P  C  T  W  Y  M  V  G  C  S  S  E  G  F  V  I  S  L :   E  M  A  S  M  G  L  S  G  T  L  S  P  S  I  G  N  L  T  H  L  R  T  M :   L  L  Q  N  N  H  L  S  G  P  I  P  A  E  I  G  Q  L  T  E  L  L  T  L  D  L  S  G  N  Q  F  D  G  G  I  P  R  A  L  G  R  L  V  Y  L  N  Y  L :   R  L  S  R  N  R  L  S  G  Q  I  P </first_frame>
            <second_frame>  Q  *  *  I  L  K  R  T  F  F  *  K  L  C  T  K  I  F  L  L  G  N  *  L  F  G  S  K  W  *  L  C  Y  S  F  S  H  F  F  I  G  W  P  L  L  Q  F  P  W  V  F  F  H  L  K  V  S  T  M  K  :  W  Q  H  *  C  L  *  R  I  K  *  E  M  N  I  M  C  *  M  D  G  I  *  I  L  L  I  L  V  H  G  T  W  L  V  V  L  Q  K  A  L  L  F  L   : L  K  W  R  V  W  D  Y  L  A  H  F  R  L  V  L  G  I  *  L  I  F  G  R   : C  C  C  R  I  I  I  Y  L  V  R  F  L  L  K  L  D  S  S  L  N  C  *  P  L  I  C  L  V  I  S  L  M  E  E  F  L  G  R  W  V  A  W  F  I  *  I  T   : *  G  L  A  G  T  D  C  L  V  K  F   </second_frame>
            <third_frame>   N  D  E  F  *  K  G  P  F  S  E  S  S  A  P  K  S  F  F  W  V  I  S  F  L  D  P  N  G  N  F  A  T  R  F  L  I  S  S  L  G  G  H  Y  S  S  F  H  G  F  S  F  T  *  R  C  Q  L  *  S :   G  S  I  D  V  Y  E  E  *  N  E  R  *  I  S  C  V  R  W  M  G  Y  K  F  C  *  S  L  Y  M  V  H  G  W  L  F  F  R  R  L  C  Y  F  S  :  *  N  G  E  Y  G  I  I  W  H  T  F  A  *  Y  W  E  F  N  S  S  S  D  D  :  V  V  A  E  *  S  F  I  W  S  D  S  C  *  N  W  T  A  H  *  T  A  D  P  *  F  V  W  *  S  V  *  W  R  N  S  *  G  V  G  S  P  G  L  F  K  L  L  :  E  A  *  Q  E  Q  I  V  W  S  N  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0111M05.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139231" stop="139117"/>
                    <exon start="138842" stop="138710"/>
                    <exon start="138613" stop="138542"/>
                    <exon start="138319" stop="138176"/>
                    <exon start="138073" stop="138037"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAFWIQMVTLLLVFSFLHWVATTPVSMGFLSPKGVNYEVAALMSMKNKMRDEYHVLDGWDINSVDPCTWYMVGCSSEGFVISLEMASMGLSGTLSPSIGNLTHLRTMLLQNNHLSGPIPAEIGQLTELLTLDLSGNQFDGGIPRALGRLVYLNYLRLSRNRLSGQIP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 34 chains have been computed
$ 
$ memory statistics:
$ 52344 bytes spliced alignments in total
$ 25 spliced alignments have been stored
$ 2093 bytes was the average size of a spliced alignment
$ 27584 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1451 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 40 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:04:13
-->
