<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:45:16"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592852" ref_strand="+" ref_description="SGN-U592852 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacccacaccttttaaataaaaaatgtccaactctgctcactatttgccttgcttctagcgcaagactggaattgtaaacacaaggcaaacctagtcccttatgatattggaacgatacagaaaaaattagcatagttctcgcacaaagttaacattgcacaaattgagaaacctaagactagcctttgggattgaagaatgaggctggaaaatacacaccatttaaccaaatctttacaaaaatttttttttactcattagcatggtaatgatcaggacgctgcgtagaaactgtgaaattaggtcttaggcctaactcacaccccaaaagctagatcaaagggaggaggattgtccaacccttataagaagtctatccatctcattaaccactgatgtgagacttttgtcattctttaacaaatgttattttcattttattttaactaagcatttgtgcaccagagatcatggattaatgaggctggcatgccctaatagagcttgaattataattcattggcccccctgatgatgacattgctgttgaaaatccagaaatcatcggcctattattaaccgcggcttgctctagtgattgaagttgcttctttaaaaacttaacataatggacaggctcctctaactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="9796" stop="11047"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10096" g_stop="10747" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U592852" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10096" e_stop="10747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCCACACCTTTTAAATAAAAAATGTCCAACTCTGCTCACTATTTGCCTTGCTTCTAGCGCAAGACTGGAATTGTAAACACAAGGCAAACCTAGTCCCTTATGATATTGGAACGATACAGAAAAAATTAGCATAGTTCTCGCACAAAGTTAACATTGCACAAATTGAGAAACCTAAGACTAGCCTTTGGGATTGAAGAATGAGGCTGGAAAATACACACCATTTAACCAAATCTTTACAAAAAGTAGTCATTACTCATTAGCATGGTAATGATCAGGACGCTGCGTAGAAACTGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTCCAACCCTTATAAGAAGTCTATCCATCTCATTAACCACTGATGTGAGACTTTTGTCATTCTTTAACAAATGTTATTTTCATTTTATTTTAACTAAGCATTTGTGCACCAGAGTTCATGGATTGATGAGGCTGGCATGCCCTAATAGAGCTTGAATTATAATTCATTGGCCCCCCTGGTGATGACATTGCTGTTGAAAATCCAGAAATCATCGGCCTATTATTAACCGCGGCTTGCTCTAGTGATTGAAGTTGCTTCTTTAAAAACTTAACATAATGGACAGCCTCATCTAACATTG</genome_strand>
        <mrna_strand>AACCCACACCTTTTAAATAAAAAATGTCCAACTCTGCTCACTATTTGCCTTGCTTCTAGCGCAAGACTGGAATTGTAAACACAAGGCAAACCTAGTCCCTTATGATATTGGAACGATACAGAAAAAATTAGCATAGTTCTCGCACAAAGTTAACATTGCACAAATTGAGAAACCTAAGACTAGCCTTTGGGATTGAAGAATGAGGCTGGAAAATACACACCATTTAACCAAATCTTTACAAAAATTTTTTTTTACTCATTAGCATGGTAATGATCAGGACGCTGCGTAGAAACTGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGATCAAAGGGAGGAGGATTGTCCAACCCTTATAAGAAGTCTATCCATCTCATTAACCACTGATGTGAGACTTTTGTCATTCTTTAACAAATGTTATTTTCATTTTATTTTAACTAAGCATTTGTGCACCAGAGATCATGGATTAATGAGGCTGGCATGCCCTAATAGAGCTTGAATTATAATTCATTGGCCCCCCTGATGATGACATTGCTGTTGAAAATCCAGAAATCATCGGCCTATTATTAACCGCGGCTTGCTCTAGTGATTGAAGTTGCTTCTTTAAAAACTTAACATAATGGACAGGCTCCTCTAACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578043" ref_strand="+" ref_description="SGN-U578043 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345131|emb|CAO71859.1| (e_value=8e-38) unnamed; (*ATH) AT5G67060.1 (e_value=1e-34) | Symbol: None | basic helix-loop-helix (bHLH) family protein, contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain | chr5:26783354-26784476 FORWARD | Aliases: K21H1.2, K21H1_2; (*SWP) sp|Q9LXD8|BHL43_ARATH (e_value=4e-22) Basic helix-loop-helix protein 43 OS=Arabidopsis thaliana GN=BHLH43; ">
      <seq>ggaacacttctcatagtgtggtatcccttttagcccatctttcattctaatatttctatatatcctcttgtttttttatttttaccttacaaaaacaaatcatggatttacaaaatattgctcactcactagaacttggattctccaatagcaatattgaaatgatacctttacaatcaccactccataactccaattacttaatgaattctcctccatctaatttctcattcatgggcaatccaattgaagagccagccgcgatgccaatactctcatcgatcgatgaaattatagcatcgactcatggtaatggaaatgattactcatgtttgcagaggaggaattctatggaggctatgagggagatgatttttcgtatcgcgatgatgcaaccaattcacattgatccagaatcagttaaacctcccaagaggaaaaatgttaagatatcgaaggatccacagagtgtggcagccaggcatcggagggaacgaataagcgaaaggataaggattttgcaaagactagtccctggaggaactaaaatggatactgcttcaatgttagatgaggctgtccattatgttaagtttttaaaaaaacaacttcaatcactagagcaagccgcggttaataataggccgatgatttctggattttcaacagcaatgtcatcaccaggggggccaatgaattataattcaagctctattagggcatgccagcctcatcaatccatgaactctggtgcacaaatgcttagttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="-" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="11608" stop="10238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11308" g_stop="10538" g_length="771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="771" r_length="771" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="-" ref_id="SGN-U578043" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11308" e_stop="10538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACTTCTCATAGTGTGGTATCCCTTTTAGCCCATCTTTCATTCTAATATTTCTATATATCCTCTTGTTTTTTTATTTTTACCTTACAAAAACAAATCATGGATTTACAAAATATTGCTCACTCACTAGAACTTGGATTCTCCAATAGCAATATTGAAATGATACCTTTACAATCACCACTCCATAACTCCAATTACTTAATGAATTCTCCTCCATCTAATTTCTCATTCATGGGCAATCCAATTGAAGAGCCAGCCGCGATGCCAATACTCTCATCGATCGATGAAATTATAGCATCGACTCATGGTAATGGAAATGATTACTCATGTTTGCAGAGGAGGAATTCTATGGAGGCTATGAGGGAGATGATTTTTCGTATCGCGATGATGCAACCAATTCACATTGATCCAGAATCAGTTAAACCTCCCAAGAGGAAAAATGTTAAGATATCGAAGGATCCACAGAGTGTGGCAGCCAGGCATCGGAGGGAACGAATAAGCGAAAGGATAAGGATTTTGCAAAGACTAGTCCCTGGAGGAACTAAAATGGATACTGCTTCAATGTTAGATGAGGCTGTCCATTATGTTAAGTTTTTAAAGAAGCAACTTCAATCACTAGAGCAAGCCGCGGTTAATAATAGGCCGATGATTTCTGGATTTTCAACAGCAATGTCATCACCAGGGGGGCCAATGAATTATAATTCAAGCTCTATTAGGGCATGCCAGCCTCATCAATCCATGAACTCTGGTGCACAAATGCTTAGTTAAA</genome_strand>
        <mrna_strand>GGAACACTTCTCATAGTGTGGTATCCCTTTTAGCCCATCTTTCATTCTAATATTTCTATATATCCTCTTGTTTTTTTATTTTTACCTTACAAAAACAAATCATGGATTTACAAAATATTGCTCACTCACTAGAACTTGGATTCTCCAATAGCAATATTGAAATGATACCTTTACAATCACCACTCCATAACTCCAATTACTTAATGAATTCTCCTCCATCTAATTTCTCATTCATGGGCAATCCAATTGAAGAGCCAGCCGCGATGCCAATACTCTCATCGATCGATGAAATTATAGCATCGACTCATGGTAATGGAAATGATTACTCATGTTTGCAGAGGAGGAATTCTATGGAGGCTATGAGGGAGATGATTTTTCGTATCGCGATGATGCAACCAATTCACATTGATCCAGAATCAGTTAAACCTCCCAAGAGGAAAAATGTTAAGATATCGAAGGATCCACAGAGTGTGGCAGCCAGGCATCGGAGGGAACGAATAAGCGAAAGGATAAGGATTTTGCAAAGACTAGTCCCTGGAGGAACTAAAATGGATACTGCTTCAATGTTAGATGAGGCTGTCCATTATGTTAAGTTTTTAAAAAAACAACTTCAATCACTAGAGCAAGCCGCGGTTAATAATAGGCCGATGATTTCTGGATTTTCAACAGCAATGTCATCACCAGGGGGGCCAATGAATTATAATTCAAGCTCTATTAGGGCATGCCAGCCTCATCAATCCATGAACTCTGGTGCACAAATGCTTAGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600741" ref_strand="+" ref_description="SGN-U600741 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118485815|gb|ABK94755.1| (e_value=3e-37) unknown; (*ATH) AT1G45201.1 (e_value=9e-35)  Symbol: None | similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:At5g67050.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35707.1); contains InterPro domain Lipase, class 3 (InterPro:IPR002921)... ; ">
      <seq>gagcagtagctgcaacaagtccttctgcagcaattatatgctactaaagccagaagaatgtagtgtatctgatttggcaaaaattttgttttccagcaaaaatttgggacaaaaagaattcgttgatgtagacatccctaatgaagaattgaacatgaccaaggagcctttgtcacgtagatgggtgttttttatttccattctagtccagaaggttttaatcaaaatttctaaacctttagcagggtttggcaatacaattgaatactggcttaaccttcagaacgtcaacggtggcttcttccgtcttattttcaactccttaagaggtagagctgtaataccggataaggaatcagcagagtacttgtcatttattggaaatttggataaaagatttgagctggattttagtaagattgttgaagaagttggaggatgtaaaagatatgatgaggcaatcagcataatggctgcaaaagctgcttacgagaacaaagcatggattcaaaatactgtcaaccaacactggaagatggatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="17349" stop="18583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17649" g_stop="17977" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17978" i_stop="18068" i_length="91">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18069" g_stop="18274" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="535" r_length="206" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U600741" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17649" e_stop="17977"/>
          <exon e_start="18069" e_stop="18274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAGTAGCTGCAACAAGTCCTTCTGCAGCAATTATATGCTACTAAAGCCAGAAGAATGTAGTGTATCTGATTTGGCAAAAATTTTGTTTTCCAGCAAAAATTTGGGACAAAAAGAATTCGTTGATGTAGACATCCCTAATGAAGAATTGAACATGACCAAGGAGCCTTTGTCACGTAGATGGGTGTTTTTTATTTCCATTCTAGTCCAGAAGGTTTTAATCAAAATTTCTAAACCTTTAGCAGGGTTTGGCAATACAATTGAATACTGGCTTAACCTTCAGAACGTCAACGGTGGCTTCTTCCGTCTTATTTTCAACTCCTTAAGAGGTACGTACTATATATTATCCTCTGTCTCAATTTATGTGATACTTAGATCTCTCTATTAGAGTCGTACTATATATATATTTACGATTTATAGGTAGAGCTGTAATACCGGATAAGGAATCAGCAGAGTACTTGTCATTTATTGGAAATTTGGATAAAAGATTTGAGCTGGATTTTAGTAAGATTGTTGAAGAAGTTGGAGGATGTAAAAGATATGATGAGGCAATCAGCATAATGGCTGCAAAAGCTGCTTACGAGAACAAAGCATGGATTCAAAATACTGTCAACCAACACTGGAAG</genome_strand>
        <mrna_strand>GAGCAGTAGCTGCAACAAGTCCTTCTGCAGCAATTATATGCTACTAAAGCCAGAAGAATGTAGTGTATCTGATTTGGCAAAAATTTTGTTTTCCAGCAAAAATTTGGGACAAAAAGAATTCGTTGATGTAGACATCCCTAATGAAGAATTGAACATGACCAAGGAGCCTTTGTCACGTAGATGGGTGTTTTTTATTTCCATTCTAGTCCAGAAGGTTTTAATCAAAATTTCTAAACCTTTAGCAGGGTTTGGCAATACAATTGAATACTGGCTTAACCTTCAGAACGTCAACGGTGGCTTCTTCCGTCTTATTTTCAACTCCTTAAGAG...........................................................................................GTAGAGCTGTAATACCGGATAAGGAATCAGCAGAGTACTTGTCATTTATTGGAAATTTGGATAAAAGATTTGAGCTGGATTTTAGTAAGATTGTTGAAGAAGTTGGAGGATGTAAAAGATATGATGAGGCAATCAGCATAATGGCTGCAAAAGCTGCTTACGAGAACAAAGCATGGATTCAAAATACTGTCAACCAACACTGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575840" ref_strand="+" ref_description="SGN-U575840 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|118485815|gb|ABK94755.1| (e_value=4e-76) unknown; (*ATH) AT1G45201.1 (e_value=4e-62)  Symbol: None | similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:At5g67050.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35707.1); contains InterPro domain Lipase, class 3 (InterPro:IPR002921)... ; ">
      <seq>gtacaatacaagctggaatgcacttctcttctataaataaataaataaattactttaccaaataataatcatcgatctgcagtatatggcgagcaatagttgcaacaaatctttctgtagcaactatatgttgctaaagccagaagaatgtagcgtattagatttggcaaaacttttactttccggtaaaaaattgggacaaaaagacttcatcgactgccctaatgaagaaatgactaaggagcctttgtcacgtagatgggttatatttttatctatactagtccagaagattttactcgcaactgctaagcctttagctggattgggcaatgctattgagtactggcttaaccttcaaaacgtcaatggcggattcttccgtcttcttttcaaatccttaatatgtaaagctgtatcaccggataaggaatcagctgcgtacttgtcatttattggaaatttggataaaagagttgatctggattttagtaagaatgttggaggacgtagaagatatgatgaaggaatcagcatgatggctgcaaaagcagcttatgagaacaaagcatatgttgaaactactgtcaaccatcattggaagatggatctggtgggatcatttgacttctggaatgattatcaagagaaagctacaacacaagcattcgtgcttcaagataaaagcgtggaccctgagctgattattgttgcatttagaggaactgaattcttcaattctgatgattggatttctgactttaatctctcttggtatgacattcccggcatgggcaaagtccatgccggatttatgaaagctctcggcttacaaaagagcctgggatggcccaaaaatattgtacaaactgatactaataatattaatcagccacctccagcctactatttcctaagaaaattgctcaaacaacttctggagaaaaatgaaaaggcaaggtttttagttaccggtcacagcttaagtggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="21755" stop="25865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22054" g_stop="22460" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="407" r_length="407" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22461" i_stop="22539" i_length="79">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22540" g_stop="22736" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="604" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22737" i_stop="23282" i_length="546">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23283" g_stop="23316" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="638" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23317" i_stop="25211" i_length="1895">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25212" g_stop="25565" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="992" r_length="354" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U575840" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>992</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22054" e_stop="22460"/>
          <exon e_start="22540" e_stop="22736"/>
          <exon e_start="23283" e_stop="23316"/>
          <exon e_start="25212" e_stop="25565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACAATACAAGCTGGAATGCACTTCTCTTCTATAAATAAATAAATAAATTACTTTACCAAATAATAATCATCGATCTGCAGTATATGGCGAGCAATAGTTGCAACAAATCTTTCTGTAGCAACTATATGTTGCTAAAGCCAGAAGAATGTAGCGTATTAGATTTGGCAAAACTTTTACTTTCCGGTAAAAAATTGGGACAAAAAGACTTCATCGACTGCCCTAATGAAGAAATGACTAAGGAGCCTTTGTCACGTAGATGGGTTATATTTTTATCTATACTAGTCCAGAAGATTTTACTCGCAACTGCTAAGCCTTTAGCTGGATTGGGCAATGCTATTGAGTACTGGCTTAACCTTCAAAACGTCAATGGCGGATTCTTCCGTCTTCTTTTCAAATCCTTAATATGTACGCATTTTATTTTTTTGTCCAATACTTTTTCTTCTTTTAGATCTGTAGTACTGATATTTATGAACAATAATTGTAGGTAAAGCTGTATCACCGGATAAGGAATCAGCTGCGTACTTGTCATTTATTGGAAATTTGGATAAAAGAGTTGATCTGGATTTTAGTAAGAATGTTGGAGGACGTAGAAGATATGATGAAGGAATCAGCATGATGGCTGCAAAAGCAGCTTATGAGAACAAAGCATATGTTGAAACTACTGTCAACCATCATTGGAAGGTAAACTACCTGAGCTAACATATTGGGTATGAACCAAAATGTTTTCTAGTTTTTTACTTACTGTTTTTGTTAATATTTATTACACTCTCTATACCATTTTATGTGACATCACATGACCTGCCACGGAGTTTAAGAAATAAATGAAGACTTTGAATTGTTTATTAAATTGTCGTTCAAAAGTAGACTCACTTTTCTCTCTCTTCATAAATATATTAGAGTACTATTTAAAATTAAGTGGGATCAACAAAAGTAAAAAACACTTTTGAATACTAATCATATAAAAAATGTGATATTCTTTTTGGAACCGATAAAAAAGAAAATGGAACAAAGGGATTATCTATATGTAATAACTAAGAGAGGTAGGGTGGGAGCAACCTTATTTTTTCTAACTCCATTTTTGGGAAACTTAAGATGAATATATTTTTTAATTTTTTTTTCTTACAAATCAGACTTGAAAAAGTTTTCAGGCATCCATTTTATTTCTCTCTTTTCTTAATAATTAATGAAGAAGGATGTGCTCAGATCTTGCGTTTCAATATTATGCAGATGGATCTGGTGGGATCATTTGACTTCTGGAATGGTAAGATATTTATTACTCCTACTAATAATATGTATAAGCTTTTGCAAACATAGTGATTATATCACGGAGTAGTGCTCAAATTATTGAAAATAATATAATTAAGTTACCCTTTTTATTTTGTGACAACAAAAATAATCTCATTTTACAATTGGAAGTAAAGTTCGATTTCTCTTGTTCTATAAGAGGGAGTTTGAACCAGCAACATATCTGCTTGCCATAGGGGTATTTTTAAGTTATTTTGCTTCAAAGTTATATTTAGAGCTGTTCATTATGTATAACTATTTTTAAATAGGCAAATGATATGATACATTTCTCGAATTTGCCATTTAGATTGATATATATATATTCGTCGTAAAAGTTATTTATATATACGCTACAGTTATATAAATGATTTACATACATAATTTTTCTCAAATCAAAATGAAAAAATAACTTTAAATCATTTTTAATTAATTCAACGGCTAACTTGAATTTATTATTTGATTGTCAATTTTCTTTTATTTTTTCACTCATTTTCCTTTAAAGTTATTAAAGATGCCTCATAGCTTTTTATTGATATTAAAGTTATATTACAACATAACCAATAAATGTAGTTCAAAAAAATTTTCTCCGTTTTCATTCACATTCTGTTTTGTTTCTCATGACACTTAAGTATGAATAAGAAATCAAATAATATTTATCAATCAAAAAAATAATTTATACGTGAATTTTTTTTTAATATACAATTTTAAAAAAATTCAAATTAATTTTATAACGATAAAAATATATATGAACAATATTTATAACATTAAAAATATATGTAAATCAATTTATAATAATAAAACTATATATAAAATACTTTTATTATGAATTGGACAAAATAGCAGGATTTAAACCTTTGTACACTTCAAATAAGACCGTGAGCTGAGCTCTATCTCACAGTCTTGTACTATTGCTTTTTTAAAGAACAATTATGACAGTAGCCTCTTTATTAGTATTGTGTGCTAAGATATATAGGTTTGAGCTTTAAAATAATTTACATTTATCTTTAATAATACTACCACTAATTATATGCATTCTTTTTTGTCTAGAATAATCATTTTTTCTATTTTAGGGTTATTCTCTAAAAATGAAAGAGAGCGAAATTAGATTAACAAACAATTTAATTAACATTAAATAAAAATGATCAATATTAATATTTAATACTCTACTATATATCTCAAGTTCATTTTATATTTAATATAATAATAGTTTATTATCATGTAATAATCTATAATTTATTTATAAATATTAAACCCCGATTTCTTCCTTACTTCTTATAAATCGAAAAGGAAAGCACGTTCACTTATAACTAAATGATTGATGCATAATGTTTGACATAAAACAAAACTAGTAATTTTAACCCACATTTTATAATCTATATAGGATTGTTCTAGCCCAACCACTGAGATGTATCTTGCTTTCTATCAAAAAAATAAAATAAATTTTTTGAAGTCTTATTAACTTATGAAACGAAACTAGTGAAATTTACTCAATTAATTAAATACATTTATCATCAATTAATAAATTGAAAGTTTGAGTTATTTTTTTGAAAGATAAATGAATAATATTAATCTTTTTTAGGGTGGGCCGGAAAATAAAAGGTCGTGAGACAAATTACCCGGGGGTCATAGCGAGGAGACCAAATAATGCGCACACACACGTTGTGGGACCCTACACCTACTTGAAGCATCAATCACATAATGGGGAGCACCACCCCTGTGATCTGAATTTAATCCAAATTTGCTTGTAAATTCGAATTGAACAAGAAATAATTGAACACATCATCAATGATGTGTGGGTGTCGTTTTAGTAGGGAACAAATTATTCCTTATCTTGAATTTTCCTTATTTTGTTTTTTTATTGGATTTGAACAGATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAGGTGGAG</genome_strand>
        <mrna_strand>GTACAATACAAGCTGGAATGCACTTCTCTTCTATAAATAAATAAATAAATTACTTTACCAAATAATAATCATCGATCTGCAGTATATGGCGAGCAATAGTTGCAACAAATCTTTCTGTAGCAACTATATGTTGCTAAAGCCAGAAGAATGTAGCGTATTAGATTTGGCAAAACTTTTACTTTCCGGTAAAAAATTGGGACAAAAAGACTTCATCGACTGCCCTAATGAAGAAATGACTAAGGAGCCTTTGTCACGTAGATGGGTTATATTTTTATCTATACTAGTCCAGAAGATTTTACTCGCAACTGCTAAGCCTTTAGCTGGATTGGGCAATGCTATTGAGTACTGGCTTAACCTTCAAAACGTCAATGGCGGATTCTTCCGTCTTCTTTTCAAATCCTTAATAT...............................................................................GTAAAGCTGTATCACCGGATAAGGAATCAGCTGCGTACTTGTCATTTATTGGAAATTTGGATAAAAGAGTTGATCTGGATTTTAGTAAGAATGTTGGAGGACGTAGAAGATATGATGAAGGAATCAGCATGATGGCTGCAAAAGCAGCTTATGAGAACAAAGCATATGTTGAAACTACTGTCAACCATCATTGGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCTGGTGGGATCATTTGACTTCTGGAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAAGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575841" ref_strand="+" ref_description="SGN-U575841 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157345130|emb|CAO71858.1| (e_value=8e-92) unnamed; (*ATH) AT5G42930.1 (e_value=9e-78) | Symbol: None | lipase class 3 family protein, low similarity to Triacylglycerol Acylhydrolase (E.C.3.1.1.3) (Rhizomucor miehei) GI:230348; contains Pfam profile PF01764: Lipase | chr5:17227959-17229654 REVERSE | Aliases: MBD2.13, MBD2_13; ">
      <seq>aaattacccgggggtcatagcgaggagaccaaataatgcgcacacacacgttgtgggaccctacacctacttgaagcatcaatcacataatggggagcaccacccctgtgatctgaatttaatccaaatttgcttgtaaattcgaattgaacaagaaataattgaacacatcatcaatgatgtgtgggtgtcgttttagtagggaacaaattattccttatcttgaattttccttattttgtttttttattggatttgaacagattatcaagagaaagctacaacacaagcattcgtgcttcaagataaaagcgtggaccctgagctgattattgttgcatttagaggaactgaattcttcaattctgatgattggatttctgactttaatctctcttggtatgacattcccggcatgggcaaagtccatgccggatttatgaaagctctcggcttacaaaagagcctgggatggcccaaaaatattgtacaaactgatactaataatattaatcagccacctccagcctactatttcctaagaaaattgctcaaacaacttctggagaaaaatgaaaaggcaaggtttttagttaccggtcacagcttaggtggagcacttgcaattttgtttccagcaatattagcattccatgaggaatcttggctgttgaaaagattagggggcatttacacatttggtcaaccaagagttggagatgaaagttttattgaatatatgaatggacaattaacaaaacatgaggttccatactacagagttgtgtacagcaatgacatggtaccaagattgccatttgacaattctactttcttgttcaagcactttggaacttgcatctattacaatagcctctacagagaaaaaattttagttgaagaaccagacaagaatgggtcgtttctgttaatgtttataccaaagatgttaaacgcagcttgggagctgatcagaagctgtattctaccatgtgtacacggacgaaagtatcaggaaggcgggcttcttttatgcatgagagtgattggcttgctattcccaggcatgcctgctcattgtcctcaggattatgttaactctaccaggcttggatcatctgatcattccactgaagacgttgcaaagtatcaaaagattggcatagtaccagcataattataaaataattaactacccagtgtgtgctttttagaatttcttatcctacatattagtttttccctgcaccaatgtattattagatatttaattgatttgaagcttgaatcgagtccttggagaacaaagtgaaaaattcattttatccaatggaatatatacttgagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="24649" stop="26781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24949" g_stop="25837" g_length="889"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="889" r_length="889" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25838" i_stop="26019" i_length="182">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26020" g_stop="26481" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="890" r_stop="1351" r_length="462" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U575841" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24949" e_stop="25837"/>
          <exon e_start="26020" e_stop="26481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTACCCGGGGGTCATAGCGAGGAGACCAAATAATGCGCACACACACGTTGTGGGACCCTACACCTACTTGAAGCATCAATCACATAATGGGGAGCACCACCCCTGTGATCTGAATTTAATCCAAATTTGCTTGTAAATTCGAATTGAACAAGAAATAATTGAACACATCATCAATGATGTGTGGGTGTCGTTTTAGTAGGGAACAAATTATTCCTTATCTTGAATTTTCCTTATTTTGTTTTTTTATTGGATTTGAACAGATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAGGTGGAGCACTTGCAATTTTGTTTCCAGCAATATTAGCATTCCATGAGGAATCTTGGCTGTTGAAAAGATTAGGGGGCATTTACACATTTGGTCAACCAAGAGTTGGAGATGAAAGTTTTATTGAATATATGAATGGACAATTAACAAAACATGAGGTTCCATACTACAGAGTTGTGTACAGCAATGACATGGTACCAAGATTGCCATTTGACAATTCTACTTTCTTGTTCAAGCACTTTGGAACTTGCATCTATTACAATAGCCTCTACAGAGAAAAAGTAAGAACCTTTTTCTACCTCTTTTTAAACAAATTTAGTCCATGAAAATGTTACTTTATTTGGATGTAAATTTCGACTTGTATCTACATATGCAAAAATAAAATAAAATAAGATCTAACTAATTAGTTCTTAACTTATTAACTCCTTATCCTGAACGAATATATGTTGTTTGAATAATGCAGATTTTAGTTGAAGAACCAGACAAGAATGGGTCGTTTCTGTTAATGTTTATACCAAAGATGTTAAACGCAGCTTGGGAGCTGATCAGAAGCTGTATTCTACCATGTGTACACGGACGAAAGTATCAGGAAGGCGGGCTTCTTTTATGCATGAGAGTGATTGGCTTGCTATTCCCAGGCATGCCTGCTCATTGTCCTCAGGATTATGTTAACTCTACCAGGCTTGGATCATCTGATCATTCCACTGAAGACGTTGCAAAGTATCAAAAGATTGGCATAGTACCAGCATAATTATAAAATAATTAACTACCCAGTGTGTGCTTTTTAGAATTTCTTATCCTACATATTAGTTTTTCCCTGCACCAATGTATTATTAGATATTTAATTGATTTGAAGCTTGAATCGAGTCCTTGGAGAACAAAGTGAAAAATTCATTTTATCCAATGGAATATATACTTGAGTTCT</genome_strand>
        <mrna_strand>AAATTACCCGGGGGTCATAGCGAGGAGACCAAATAATGCGCACACACACGTTGTGGGACCCTACACCTACTTGAAGCATCAATCACATAATGGGGAGCACCACCCCTGTGATCTGAATTTAATCCAAATTTGCTTGTAAATTCGAATTGAACAAGAAATAATTGAACACATCATCAATGATGTGTGGGTGTCGTTTTAGTAGGGAACAAATTATTCCTTATCTTGAATTTTCCTTATTTTGTTTTTTTATTGGATTTGAACAGATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAGGTGGAGCACTTGCAATTTTGTTTCCAGCAATATTAGCATTCCATGAGGAATCTTGGCTGTTGAAAAGATTAGGGGGCATTTACACATTTGGTCAACCAAGAGTTGGAGATGAAAGTTTTATTGAATATATGAATGGACAATTAACAAAACATGAGGTTCCATACTACAGAGTTGTGTACAGCAATGACATGGTACCAAGATTGCCATTTGACAATTCTACTTTCTTGTTCAAGCACTTTGGAACTTGCATCTATTACAATAGCCTCTACAGAGAAAAA......................................................................................................................................................................................ATTTTAGTTGAAGAACCAGACAAGAATGGGTCGTTTCTGTTAATGTTTATACCAAAGATGTTAAACGCAGCTTGGGAGCTGATCAGAAGCTGTATTCTACCATGTGTACACGGACGAAAGTATCAGGAAGGCGGGCTTCTTTTATGCATGAGAGTGATTGGCTTGCTATTCCCAGGCATGCCTGCTCATTGTCCTCAGGATTATGTTAACTCTACCAGGCTTGGATCATCTGATCATTCCACTGAAGACGTTGCAAAGTATCAAAAGATTGGCATAGTACCAGCATAATTATAAAATAATTAACTACCCAGTGTGTGCTTTTTAGAATTTCTTATCCTACATATTAGTTTTTCCCTGCACCAATGTATTATTAGATATTTAATTGATTTGAAGCTTGAATCGAGTCCTTGGAGAACAAAGTGAAAAATTCATTTTATCCAATGGAATATATACTTGAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570151" ref_strand="+" ref_description="SGN-U570151 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|217074298|gb|ACJ85509.1| (e_value=2e-139) unknown; (*ATH) AT4G36960.1 (e_value=1e-135)  Symbol: None | RNA recognition motif (RRM)-containing protein, similar to SP:P48809 Heterogeneous nuclear ribonucleoprotein 27C (hnRNP 48) {Drosophila melanogaster}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif)... ; (*SWP) sp|O94432|YHKF_SCHPO (e_value=3e-27) Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15; ">
      <seq>aagagcagtggcttggggtttgaaggagctgagcggcgcgaggaagagcgagcggagcggactgagagagcgaattacggttttgataatcggaatcaagaaggtcagtgcagcgcgtaaatctaatttaatactcgttgtgattttaatttctttggcatccgaagatcttacagaaattggtgagtttgttctgaaatatgatgatgatgatgatatttgtgtgtgagaaagaggtgtgtgtctgttacctgcaggaagaatcgtcttgtgtgagcgattcgtttatagagagaggtgtggtgagatcgcgagagcgagttgagtgtatatcctacgatttccactctccgctaatcaatttgtcagacaagttttcgttaccatgtcggagaagaagcttgtggttttaggcatcccatgggacgtggatacagaaggtctaagggaatatatgatcaaatatggagatttagaggattgtattgtgatgaaggaacgtgctactggtcgttctcgtggattcggctatgtcacatttgctacagttgaggatgctaagaatgcattgtctaaggagcactttcttggaaacagaatgctagaagtgaaagtggcgacaccgaaggaggagatgagggctcctgcaaagaaagtgaccaggattttcgttgctaggattcctccgtctgtgtctgaagctactttcagaggttattttgagaagtacggtgaaataacagatctgtacatgccaaaggatccatctaccaagggacatcgtggaattgggtttattacttttgcaaatgctgaatcagttgatgatctgatgagtgacacccatgaactgggaggttccacaattgtggtggaccgagcaacacccaaggaagaagatttcagacctgttagtcggatgtctcagagtggaggaggatatggtgcatataatgcatatatgagtgcaactactagatatggtgcgcttggtgctcctaccttatatgatcatcctagttctatgtatggaagaggtggaggtggaggtggaggtggaggtggaggatttccatctcgtggtggcttgggccagaagatctttgttggtcgactacctcaagaggcaacaactgaagatcttcgccagtattttggtagatttggccgtgttttagatgtgtatgtcccaaaggatccaagaagaccagggcatagagggtttggttttgttacatttgctgatgatggtgttgcagatcgtgtttctcgaaggcctcatgagatatgtggacatcaggttgcaattgattctgctactcctcttgatgatgctggtccaagtaacaattacatgatggatcctcctcctcctgctcctgaagcatatgggggatatggtggtcctatgcgtacttatggaaggatgtatgggggcctagattatgatgattggggttacggcctgggtggtgggagaccttcaagatcagatatgagatacaggccctactagctggcctggttggataggaggcggtcaagatcagatatgagattcaggccctagtagctttgtgttgcaggaggtcagaggctgtctgaatttccaatgggtgacaacaatagatatgtcatatttatatcagtttattattaggtggacatcataatacatgtgctactaatacttaagtaattgaaaaagcagtgctgatggattgtgcaattcacttcatacttgatcctttgtattaaatgtattgaagaaacaaaggaatgggtgctaattcctatatccagaaagtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="31100" stop="38951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31400" g_stop="31805" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31806" i_stop="31887" i_length="82">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31888" g_stop="31977" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="496" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31978" i_stop="33894" i_length="1917">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.872" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33895" g_stop="33960" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="562" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33961" i_stop="34138" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34139" g_stop="34204" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="628" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34205" i_stop="34472" i_length="268">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34473" g_stop="34558" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="714" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="34559" i_stop="34652" i_length="94">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="34653" g_stop="34698" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="760" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="34699" i_stop="34804" i_length="106">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="34805" g_stop="34859" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="815" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="34860" i_stop="36085" i_length="1226">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="36086" g_stop="36162" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="816" r_stop="892" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="36163" i_stop="36278" i_length="116">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="36279" g_stop="36420" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="893" r_stop="1034" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="36421" i_stop="36630" i_length="210">
            <donor d_prob="0.585" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="36631" g_stop="36791" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1035" r_stop="1195" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="36792" i_stop="36895" i_length="104">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="36896" g_stop="37000" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1196" r_stop="1300" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="37001" i_stop="37553" i_length="553">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="37554" g_stop="37706" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1301" r_stop="1453" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="37707" i_stop="38296" i_length="590">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="38297" g_stop="38651" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1454" r_stop="1811" r_length="358" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U570151" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1808</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31400" e_stop="31805"/>
          <exon e_start="31888" e_stop="31977"/>
          <exon e_start="33895" e_stop="33960"/>
          <exon e_start="34139" e_stop="34204"/>
          <exon e_start="34473" e_stop="34558"/>
          <exon e_start="34653" e_stop="34698"/>
          <exon e_start="34805" e_stop="34859"/>
          <exon e_start="36086" e_stop="36162"/>
          <exon e_start="36279" e_stop="36420"/>
          <exon e_start="36631" e_stop="36791"/>
          <exon e_start="36896" e_stop="37000"/>
          <exon e_start="37554" e_stop="37706"/>
          <exon e_start="38297" e_stop="38651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGAGTGAGAGAGCGAATTAGGGTTTTGATAATCGGAATCAAGAAGGTCAGTGGAGCGCGTAAATCTAATTTAGTACTCGTTGTGATTTTAATTTCTTTGGTATCCGAAGATCTTAGAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTGGTAAGTTTTGGTTTCTTTCTTGATTTTCAAGGCATGTTTGTCTTTGATTGCAATCTTAATGTGATTGCTTCTTGATTTTTAGGTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAGGTCAGTCTACGCAGCTACCTTGACTTTTATGATATGCATTGTTTCAGATATACTGTAGTTCCAAAGACTTTCATGACCTAACTGTGTGCAGTCTTGTTTTTTGTGTTGACAATGTTGTTTCTTTTTTTGTTTGTTAATTGTGCTTGTATCAGAAAATGAGATATCAAATCTGGGTTACAGAAGGTCATATATTTATCATTTGGTGCACAGCTTGCAGCTTTTAGTGCATTTAGCTTTCTTGTGAAAAACTTAGGGCTGTTATATCATTTATGGTGTAACAAAAACATAAGGATTTCCATTGCCCCAAACTATGTTATAGTTGTTAGGAGAAGGTTGTTGCTTCGCAGTTCGCTACTTGGAAAATTTAGCAGAACTATCCGCTTAAGAGATGTCACTTTTGGAATTCAACCAAGAACGTGTCCCAAACTGGTTTATTTCTTGTTAACTACATTGGTGGGCACATGAGAACTGGGTCTCAGGAGAAAATCTTGTCGAATAACTAAATGGCAATATTAGGGTTTTTAAAAACAAACGTGATTCACGACTCTCTTCTTCAATTTTCTCTTTGACACGTGTCTCTCTTCTTCAATTGTCTAGTAGATTCAAGATTGCGTTGGGTTCTTTCCTGGTAAAGTAAACCAGATTATCAAATGCGATTGCCTTTGGCCAGAGATTTTGCGCCTATTACTCGTAAGGCGCAACCCTGCAAAGGCGATCAATGGCGAGAAATGATGAGTGGTGAGGTGGCACCATTGTTGCCCTTTTATTTTATTCTTTTTGAAAAAAAACAAACGTGCTTAATAATTAAATGGCAATATTAGTGTTTTTAAAAACAAACGTGACTCACGACTCTCTTCTTCAATTTTCTCTTTGACACGTGACTCTCTTCTCCTCAGCTTCAGCCTTTAGTTACGTCTTCTTCTTCTTTCTCCTCTGCTTTGCAGCTTCTCTTCTGCCATAGTCAGCTGCTCTTTTTTTTGCTTCTTCATCTTCTTCTCTTCTTTTTTTTAGTAGGTCAATGTGCCCAGCTTCCTATTACTCTGTTAGTGATTCCTCTGTTCTTATTTTATGGTCTGTTTTTTTTAATTTTCTGCAGATGCAAATCTGCCTTTCTACAGAAAAATTCCAGGTCCTATTTTAATTTTTGTCCAACTCAACTTAGTCATACAAGTTCTTGGGTTCTAGTCTTGTTCGTCAAATTGTCTCATGAATTATTGAGTCATTCAAGTTCTATGGTTAGTTTTTAAATTGAAATATTTGCCAATATGGTATTGCTACTGAGATACTGGTTATTTATATATGCATTAAATATCTTCAGTTTTTTATATTAATTGGCGCCTCAATTCAAAGAGGCCAGCACCTCGCCACGAGGCAAGACATGCCCTTGTCGTCTTTCGACTTAACTTGCATTCCATTCCCAATTTTTGTGATGCTCTTTCCTTTCTAGTCATTCTTTAATAATGACATTTTTCAATATTTAGTAACATTTCAACTTTAAGCTACCAATTTTATCCCTAATGAAATGATTTATATGATTTATAGGCACACAAAAATCTATAGCTTATATTAGACCACAAGTTCCAAAAGTTTTCCTTTGTTTCTTAAATTCCGTGCAAAATCTAATACGTTCACATAAATTGGGACGTAGGGAGTACCAAACATTGCCATGTTTGTGTATTTTGATTCTGGTGTGTTTTGCCAATGATTTTATTGATTGCTTTTGTGACAATTTTAAACATAAAATCAACAGTGTATCAGAAGATTGATCCGTTTTACTAATTTCCCAAAAGTGTGCTGTCTGGTTTATATAGTTAATATATATTTGCATTTTAGTGCTTTGAAAGTAAATGTGCTTTCTGTTGCTAAATTTCTTATCATCTGACTGAAGAAGACTAATGAGTATTGATCTTCATCTAGGAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAGGTGATTTTGGTTTTAATTTGGTTTTCATGTCATTGTTGCAATCATATTTGCATACTACCCTCCAGTTAAACTTTCTTACAATGTATGGTCTTGTTCTTCGTCCTTGGTATAGCTTATTTATGATTTTGTGGTTTTGATGCAAACTTGATTCCTACACTTGTGGATTTGTATGATGCAGAATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAGGTGCAATGCTCTTACTCTTAATGAAAAAACTTCTCTTTGTTACTTTAGTATTTCATCCAATGCTGTACTTTTACTATCTAGGCCAACTATTAATATATTGTGGTGGCTTGAGTTGATTAAAATGGAATGGTTATCATGGTTCATATTGATTTCTTCATTTGGTTGGACATGAAAATTGCATTATAACAAGTGAAAGCCCATTTTATAATCGTTGTGCCTCTAAATACTTTGTAAGGTCTAATACTGATGCTACTAATTTTTTTGGCAGGAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGGGTATTTGTGAAGGATTGCTTTATTAAGATTATTTCTAGCTGGTTGGTTGCTTCATTATTAGAATTTAATATCCTTATTTGATTTTCTTTTGCAGTTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAGGTTCCCCTGTCTCGTTGTGTCATTATTACTTTATATATGTGCTGTCATGTTCTGGCATTAAATCATATGATTCATTATGTACTAATTAATCTTACCCAATCTGCAGGATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTGGTATGTCTCCCATCCTAATTTTTTGCAGTTTTTTCTTTATTTTCCAGGTATTTTCTGGCCACATTCAGTTATTCCTCTGCCTAATATCTAGTTATTGGGAACAGTTTTTTAATAAAACATAGGAACTTATTTTTTGGCAGGAATTGTATCTTGTAGGAACTTCCTGGGTAAATCCTATGTATCCATCTTATATTTCAGGGAGGGAAAACATTGAGTGTTGTAGTTGCAATGTTTTTCTCTGAAGGTGTCTTTAGTGCATTCACTCGGACAAGCGCTCAATTAGTGCAGTTAATTATTAAAATCTGGATCAATCAGTTTACCTTGATTCAGCATAAGTTCTTTTAATTTAATTGTTATAGATATGAAGATCTTCAACCTTTATGCATTAATCCATTACTCCAAGAAATTCACATTCTTGATATTGTAACATTTTTTGTCATTTTGGAATAACAGCTCACTGGTCAGGTGTTTAACCCGTGACCCAACAACGGTTAAAACAATTAGGAGGTTAATAATTTCCCCTTAATTCCACACTCTGTATATTGCCTCTCGGGGTGCTTATTTTGAGCCTGATAATGGGGTGATGATAAATGAATTTGACATTTGAAGAGTTTCTACTGTAGATCAGCATAATATTTGATTTGATCTCAGCCTTGATTCTTTCGCTAGTTATTTTGGTGTCAACTTGTATACCCCCACCCCATCCGAAACTGTTCCACTGGCAGTCTAGTTATACATTCTAGGTATTTTGATTGACATTCATCTTGTTTCTGGAATATAATTAACTAATAAAGTGTGTCTCTCTTAAGTGCACGCAGAGGTCCTGAGATCGAATCTCACCGCCACCCTATCAAAAAGAATTTCCATGTGCTTGGCCATGAAAAAGAATCAGGCCCGCACGTGAGGGGACGTGATGAGAGTAGAATTAACTAGTAAAAGTGCGTTCTCTCTAAAAATATTAAGCTTTTAGATTAGATGGTCACCCACTTCAACACATCTTTTATCACCTTTAGAAGTCTTGTAATTGTGCTGTCTCAGAAGAATCAGTTTCGTTTAATTTTTTCTAGGGATGTGGTAGCTACCACCTTGTTTTTATTTTTTCACCCAGGTAGAGGCAGGGAAGTTCCCTACATGCATGCCTATCATGTCTTCTGCAGACTCTAGTTTCTAGTCAGTTTTGTAATGATTTTCCTTTGAATTGAGTGGCTTTTGGTTTCTTTGCCCAGAATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAGGCAAGTTATGCATAACCGAACTTTGATGTATCTCCAGTGATATATTCTAGATGTCATTGAAGTTCACACGTTCTGTGATGATTCATTAAATTTGCATTTTCTGCTGATGATTCTAGGAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAAGTAAGTAAGCAACAATTCTTTTTTTTTATGACAAGGGAAACCCGCAGCCGCTACCCTTTGGGTGCGCACAGGGACTCCTATGCAATAGCTCGCAAACCACAAAAATGAACAGTAAATAATGACAAATATATCTTAAGCATGACACAACATCAATCATGCCTCTTATTTGACACAATTTTTTTACTAAGAGAATTTAATTAAATAAATCAGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAGGTAAAATTCTCTTATTTTCTTTCATTTTGGGGTAACAGATCTCGTCTCAAGTAACTTGGTAAATTGTTTAATTCTGTTATGATTGCGATGCTTATCTCCTGTAGGATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAGGTATTTTTTGGGATTTTAGTAAAAAAAATATTTCCTTATCTTTTGTATCTCCCACCCCAATGAAATCTGTAGACCTTGAAGTATCAGTTGACCAGATTTTGAAATGAGACCATGGATGAGGAAAATCCATGGCCTGACGACTAAATGAGGGGAAATGCTTTCCACTCTAGAGCCACTTGATGGATGATATCTTAAAACTCCCTGGCTATTGCCTAGGATGTTCTGCTTACATTATAAGTTTGTTTGAAAGGTTAACTGTTTTTTGCAAAATTTAAATCTATTGAAACTGACCTGGCCATTTACCTGGATGTACTGCAATTCAGCCAATAGAACATTGTTGTGAAGATGATAAAGTTTCAACTGTTTGCTTGGCAAATGAAAATATACATTAATGTGAAGTTGGGTTTTAGGGAGTTTGAACTTTTACATGCTGAATTTTCACCCTCCTAAATGTAAAGCCAGCTTGGGCTACCCTTTTGGCTTCACTAATATCAGTGACCTTTCATGTTATGCTATGAGTAGTCTTATTCCTAGTTCTACCTTGCTTTTTTAGGTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGATGTAAGTATTTGAACCCTACTTAGCCAGTCAAATAACTTCAGTTGTCTTGTCTTTAACTTTGACCTCCACGATAGAATTGCTTTTATATTGTTAAACATCTATTGCCATGAAAGGCTTCCACCTTGACTGTTTCTTTGGGTGATTTTGAGCTTCCAATCCTCCCCTCTCCCACCAGAAAAATGGTCAATAACTGGACCTTCTTCCTGAGTCTTTCAGCTGTGGTTCTGACTTCTGCCTGGACAATAATTCAATTTGCTCTCTTTACTGACTGACCTATGCAATATGCACAACAATGCTATGTGATGCTTTTTATGTCAATGGAAGAAAACACTCATGTTTACGGCATCTTCCTATCTTTTCAGTGCGGTGATTCAACTAATGGAGTAATTTTTGTATTTTCATATTTACCATCCTCAAAAAGACAACAATTTATCATCATGCTTTATTCATACCTCTTTCCGGTTTTAGTTTTCTCCAAGTTTGTCTCACATGGATATTATGACCAGTCTGTTTATTGTTAGTCCTTAATTTAATAGATGAGAATTCTGGTGATAACCTTTAAATATGTGATTTTCTTCTGGTTCTGACAGTGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAA-GAATGGGTGCTAATTCC-ATATCCAG-GAGTAGA</genome_strand>
        <mrna_strand>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGACTGAGAGAGCGAATTACGGTTTTGATAATCGGAATCAAGAAGGTCAGTGCAGCGCGTAAATCTAATTTAATACTCGTTGTGATTTTAATTTCTTTGGCATCCGAAGATCTTACAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTG..................................................................................GTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAG..................................................................................................................................................................................AATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAG............................................................................................................................................................................................................................................................................GAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGG..............................................................................................TTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAG..........................................................................................................GATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAG....................................................................................................................GAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAA..................................................................................................................................................................................................................GAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAG........................................................................................................GATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAAGGAATGGGTGCTAATTCCTATATCCAGAAAGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570150" ref_strand="+" ref_description="SGN-U570150 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aggcataaaacataatttgctatattgcttcactaccaactatgtttctactcctggatatggaattagcacccattctttggttcttcaatacatttaatacaaaggaccaagtttgaagtgaattgcacaatccatcaacactgctttttcaattacctaagttttagcagcacatgtattatgatggccacctaataataaactgatataaatatgacatatctattggtgtcacccattggaaattcaaaccggctttgacctcctggaacacaaagctactagggcccgaatctatatctgatcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="-" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="38997" stop="38083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38697" g_stop="38383" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="-" ref_id="SGN-U570150" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38697" e_stop="38383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGTTTCTTCAATACATTTAATACAAAGGATCAAGTATGAAGTGAATTGCACAATCCATCAGCACTGCTTTTTCAATTACTTAAGTATTAGTAGCACATGTATTATGATGTCCACCTAATAATAAACTGATATAAATATGACATATCTATTGTTGTCACCCATTGGAAATTCAGACAGCCTCTGACCTCCTGCAACACAAAGCTACTAGGGCCTGAATCTCATATCTGATCTTGAC</genome_strand>
        <mrna_strand>AGGCATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGGTTCTTCAATACATTTAATACAAAGGACCAAGTTTGAAGTGAATTGCACAATCCATCAACACTGCTTTTTCAATTACCTAAGTTTTAGCAGCACATGTATTATGATGGCCACCTAATAATAAACTGATATAAATATGACATATCTATTGGTGTCACCCATTGGAAATTCAAACCGGCTTTGACCTCCTGGAACACAAAGCTACTAGGGCCCGAATCT-ATATCTGATCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562963" ref_strand="-" ref_description="SGN-U562963 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157345125|emb|CAO71853.1| (e_value=7e-85) unnamed; (*ATH) AT4G36970.1 (e_value=2e-52) | Symbol: None | remorin family protein, contains Pfam domain, PF03763: Remorin, C-terminal region | chr4:17429739-17431680 REVERSE | Aliases: AP22.30, AP22_30; ">
      <seq>ggagcaccacaactcaaagttggtaaaagcctgaactcttctgcattagcagtagttaaagggttattgttccaagatttatgtggcatgcaatttgccattattgagaatcatgaagcagaattctacttccttgaggaattcgggtttatatacaagcccagcaacaccagaatatggagataataatgttagaggatttcagaagggatggagttctgaacgagtcccgttgccgactaacagcggcaggaggcatattagtactactgcattgatgcctttcaatagtggaaggacagtgccttcaaaatgggatgatgctgaaaggtggattactagcccagtgtttagttatggtgtttggaggactccaaacgcacaaacctacaggggccccaagtctaaaagtggacctcttgggccacctggcctaatgtatttaccgaactattcgccctctatgccagtccttgaaagtggaggtataagtaacttcattgcaaattcaccatttacaactggtgtactggtgcctgatggggtatccattcattatggtgctggtgaatatgctcagaatagtatggctcgagcaaccagtgctcccggtctgtcagatttgttcagtgaatcttcagtaccaagctctccagatgatgtcacaaaggagccagattctatttcctttgcagttttgaggagagacatggcaacacaaatgagctctgatgacagtacacatacatctccccaggaaaggtcatcttcaatccctcctggagtggagcagagcaggcagcattccactaaagtcgagattagagacgtgcaggttgacaaaggagacccaattttagggctatctcggaaaagccgggtgaggaaacccaagaaacaattaccagacataagttcgcctatctcaacgtgggatgttgtagatggaacaaagagtatgacaaagtcgcaaagagaggaagccaggatcgctgcttgggagaacttgcagaaggccaaagcagaagcagaaatccaaaagcttgagatgaaactagaaaagaggaggtcagcatccatggataagattctgaacaagcttagacacgctcaggtgaaggcccaaaatatgagacgtgcaacttcggagagtcagcctagaagggattcccacagaatcattccatttcgggagtatttcaagattacatcatttagcagttgctttgtttgccgtatcccttgattttgtgtacaggcatgaggctttctgaagtaaaattcaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="-" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="42536" stop="38885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42237" g_stop="42177" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42176" i_stop="41502" i_length="675">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41501" g_stop="40907" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="656" r_length="595" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40906" i_stop="40205" i_length="702">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40204" g_stop="39895" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="966" r_length="310" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39894" i_stop="39596" i_length="299">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39595" g_stop="39514" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="967" r_stop="1048" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39513" i_stop="39426" i_length="88">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39425" g_stop="39185" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1049" r_stop="1289" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="-" ref_id="SGN-U562963" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1289</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562963" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="42237" e_stop="42177"/>
          <exon e_start="41501" e_stop="40907"/>
          <exon e_start="40204" e_stop="39895"/>
          <exon e_start="39595" e_stop="39514"/>
          <exon e_start="39425" e_stop="39185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAGGTAAAAGCTTCACTTAATCAACATTTATTTGCTGTAAAAGTTTGAAACTTGTTGTGCTTTTTTGCTTCTCCCCCCACTTTTCTCATCCTTTTTCAGGGGTCCTGAATGCAACATGCACTTTTTTACTTTTTAACTTTGTATAATTGAGGTATATAACTGGTAATAGGAATAACCAACTTTCTTGCTGATTGCTTCTTTCTACTTCTTCCTCTGCCCTTCTGGGGACGGAAGATACTGTTGATTAAATTTAGGGGGCTTCAAATCTTCTTGTGTTTATTAGATTTAGGGAAAAATGGGAGGGGATAACAACTTGAGAATCGAACGCTAGCCAACAAGATAGAAGTTTAGATAGTCAACTAATTGAACGAGCTACTGAATAAAAATTTGTTCAGGTGTCAACTTTCTTTTGAATCTACTAGTAATAAATTTATTCCACTACTGGCAATATTTGGCCATTTTAACTTTTCCAGTGGTCCTGACTTTGTGATGACTGTAACCTCTAAATTACTTAATTGCCACAAATTTCAAGATTTTTGAGAGTAATTCTGTGTTGCTCAAGACAAAATGAGGACATACCTGGATAGCATTTTTTTAATTTTGGATGTATAGTGGTGGTGTGATAGTAAAAAGCCTAGTTTAGATTTATGGTCTTTAATGTTCTAACCAATTGGATAGGGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTCAAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAGGTATGCATTTCTTCCGTTGCCTGCTTTGTACTGGTTGTCATAGCGCGAGAGAAGCACTAACCTAATTCTGGTGAATCTTAATTTGTTGTCACTTCAGTTCTTGCAAAAGAAGGTCTCAACGGTCCTACTGTCTCTATATCAGGTTTAAATGTATTATTTAAGTCAACTTAGCTATAGAGTCTTAAGACACTTGAAATGTGGAAGTTGTAGCCTGCAGATTAAGAATTGGGATCGGGAATAACTAATAGCTAAGACACGGATCTTGAATTTGATGAGAAACCCAGCTAAAACAGAAGTTTAATCGAAGTTCAGTGACTGTCCTCCTAAGTTTTAGCAATTGATGATGGCAATATCTCATGTAACACAAGATCCAAGTGTTGAGGACTTCCTATCATATGAATCTACACTTATGTGCTACATGACGGATGAAAAAGCAGTATGCAATTGTATAAACTGATTTAGATGAATAATCATCTTGTTATGCTAGGATTGCAAGTAGTGTTGGTTCATCTTAAAAAATATGACTTTGATGCTTCTTAACTACACTCAGGCCATTTGTTTGAAGTTTGTTAAGCATCAAGTTTACCAGCAAAAGGCCATTGTTCAGTTATGAAACGATTTTTGAGAGAGAAAGATATGTCTTTAGTAAAGTACACCACTATAATTTAATGATATTCTGTTGTTGATGAATCCAATGAACAGATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAAGTAAGCATGCATTTCCGGCTTGTTTTTGCTTCTTATGTTTGCTAATGCAGCTATCTTGTCCTTCCATACAAATATTCCACATTTTCAAGGGAACTGACATGCCCTTATGTGTAACTCCACAAGTTTGTAGAAACTATTTGGGCCAAGTAGCGAAATACACAACCTTCACCTCACTGCTAGATTCACAAATAAAAGATTGATGGACATTCTTTTGGCAATACATATGTATACTTATAGTAGGTGCATTTGTCAAGGAGCAAAAATACTATATATGAATAACGGTTGTGCATTTTGTGAAGGTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAGGTTCGTTAGACATATATCCAGACACTGATACTTGTTTGAAAGAATAGGACGAGCATAAAAGAAGACTTAACTATTATTTGCATTTCAGATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</genome_strand>
        <mrna_strand>GGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTTTAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAA...........................................................................................................................................................................................................................................................................................................GTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAG........................................................................................ATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569421" ref_strand="+" ref_description="SGN-U569421 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|148053196|gb|ABQ52698.1| (e_value=0) zeaxanthin; (*ATH) AT5G67030.1 (e_value=0)  Symbol: None | zeaxanthin epoxidase (ZEP) (ABA1), identical to GI:9857296 AtABA1; controls Pfam profiles PF01360: Monooxygenase and PF00498: FHA domain; identical to cDNA AtABA1, GI:9857295 | chr5:26770748-26774462 REVERSE | Aliases: K8A10.10, K8A10... ; (*SWP) sp|P93236|ABA2_SOLLC (e_value=0) Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum; ">
      <seq>atatattacttgtttggatatcaatcttccttgccccaccaccatcctcactttaacccacaaatcccactttctttggcctaattaacaattttttcaataaatcttcttttcactgaatcatacatacattggaagaaaaactcaaatcttcttttcttgaactggggttcaattaaaagatgtattcaactgttttttacacttcagtgcatccttccacttcagttttatcaagaaagcagctacctttattgatttccaaggacttttctgcagagttatatcattctttaccttgtaggagcttggaaaatgggcatatcaacaaggttaaaggagtaaaagtaaaagcaacaattgctgaagctccagttactcctacagagaagactgactctggggctaacggtgatttgaaggttccacagaagaagttgaaagtacttgttgcgggtggtgggattggtgggttagtgtttgctttggcagcaaagaaaagggggtttgatgtattggtgtttgagagggatttaagtgctatcagaggagagggacaatatagaggtccaatacagatacagagcaatgcattggctgctttagaagcaattgatttggatgttgctgaagacattatgaatgctggctgcatcactggtcaaaggattaatggcttggttgatggtatttctggcaactggtattgcaagtttgatacgttcactccagcagtggaacgtggacttccagtgacaagagttatcagtcgcatgactttgcagcagatccttgcacgtgctgttggtgaggagataattatgaatgaaagtaatgttgtagactttgaggatgatggagagaaggttactgtggttcttgagaatggacaacgatttacaggtgatcttctggttggtgctgatggcataagatctaaggtacggactaatttattcggacccagtgaagctacttactctggctacacttgttatactggaattgcagatttcgttccagctgatattgatacagttgggtaccgcgtctttttgggccacaaacagtactttgtttcttcagatgtggggggaggcaagatgcagtggtatgcattttacaatgaaccagctggtggtgcggatgccccaaacggtaaaaaggaaagattgcttaaaatatttgggggatggtgtgacaatgttatagacctattagttgccacagatgaagatgcaattcttcgtcgtgacatctatgatagaccgccaacctttagttggggaagaggtcgtgttacattgcttggggactccgtccatgccatgcagcctaatttgggtcaagggggatgcatggccatagaggatagctatcaactagcactggaacttgaaaaagcatgcagtcgaagtgcagagtctggaagccctgtggatatcatctcatctttaaggagctatgaaagtgctagaaaacttcgagttggagtcatccatggactggctagaatggctgcaatcatggcatctacttacaaggcttatcttggcgtcggacttggtccactatcatttttgacgcagtatagaataccacatcctggaagagttggtggaagagtttttattgacttgggaatgcctctgatgttaagttgggttctaggaggcaatggggacaagcttgaaggcagaataaaacattgcaggctatctgagaaagcaaatgaccaattgagaaaatggtttgaagatgatgatgctttagagcgtgctactgatgcagagtggttacttttacctgcggggaatggctcttctggtttagaagctattgttttaagcagagatgaggatgtcccttgcactgtcgggtccatctcacatacaaatattcctggaaaatcaatagttttacctttgccacaggtatctgaaatgcacgcccggatatcatgcaaagacggagcattttttgtaactgatttacgaagtgaacatggtacctgggttacagataatgaaggcagaagatatcggacgtctccaaacttccctacacgttttcatccatcagatgttatcgaatttggttctgataaggcagcatttcgtgttaaagcaatgaaatttccactaaaaacttctgaaaggaaggaagagcgcgaagcagtggaggcagcgtaaagcttgacctgatataaacaggaaattgtacagcattttatagcaaacatcaggcgttgagcaatttaagcatagttaattttgtatactgtaggttttagaaaagatccataaacaagacaccatgaaagaaaatacagagattctcctaaagaaatctggagaatgtcatggacattgtctcttattctaccattgctaaaaatatattacttctctatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0104A12-s6e5e/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0104A12.1" temp_strand="+" temp_description="C02HBa0104A12.1  AC215383.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0104A12 sequenced_by:kribb upload_account_name:korea">
        <position start="49464" stop="55554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49764" g_stop="50466" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50467" i_stop="50904" i_length="438">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50905" g_stop="51067" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="866" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51068" i_stop="51220" i_length="153">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51221" g_stop="51295" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="867" r_stop="941" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51296" i_stop="51464" i_length="169">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51465" g_stop="51565" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="942" r_stop="1042" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51566" i_stop="51680" i_length="115">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51681" g_stop="51796" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1043" r_stop="1158" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51797" i_stop="52383" i_length="587">
            <donor d_prob="0.731" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="52384" g_stop="52595" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1159" r_stop="1370" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="52596" i_stop="52748" i_length="153">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52749" g_stop="52840" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1371" r_stop="1462" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="52841" i_stop="53057" i_length="217">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="53058" g_stop="53172" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1463" r_stop="1577" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="53173" i_stop="53273" i_length="101">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="53274" g_stop="53377" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1578" r_stop="1681" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="53378" i_stop="53736" i_length="359">
            <donor d_prob="0.085" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="53737" g_stop="53782" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1682" r_stop="1727" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="53783" i_stop="53892" i_length="110">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="53893" g_stop="53957" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1728" r_stop="1792" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="53958" i_stop="54056" i_length="99">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="54057" g_stop="54143" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1793" r_stop="1879" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="54144" i_stop="54458" i_length="315">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="54459" g_stop="54513" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1880" r_stop="1934" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="54514" i_stop="54603" i_length="90">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="54604" g_stop="54692" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1935" r_stop="2023" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="54693" i_stop="54783" i_length="91">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.547" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="54784" g_stop="54868" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="2024" r_stop="2108" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="54869" i_stop="54945" i_length="77">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="54946" g_stop="55254" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="2109" r_stop="2417" r_length="309" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0104A12.1" gen_strand="+" ref_id="SGN-U569421" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0104A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49764" e_stop="50466"/>
          <exon e_start="50905" e_stop="51067"/>
          <exon e_start="51221" e_stop="51295"/>
          <exon e_start="51465" e_stop="51565"/>
          <exon e_start="51681" e_stop="51796"/>
          <exon e_start="52384" e_stop="52595"/>
          <exon e_start="52749" e_stop="52840"/>
          <exon e_start="53058" e_stop="53172"/>
          <exon e_start="53274" e_stop="53377"/>
          <exon e_start="53737" e_stop="53782"/>
          <exon e_start="53893" e_stop="53957"/>
          <exon e_start="54057" e_stop="54143"/>
          <exon e_start="54459" e_stop="54513"/>
          <exon e_start="54604" e_stop="54692"/>
          <exon e_start="54784" e_stop="54868"/>
          <exon e_start="54946" e_stop="55254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTAAATTCACATCACTATGATTTCTTTGTGCTAATTAGGTGCTTGTTTATGCTTTACTCTGATATGTTTTACTTGAGTCGACATCAAAAGTTAGGGATACCACCCTCCTCAGAACCCACTCGTGTGCTTGTCCGAAGAGAAACTCTTGGTGTTATTTAACAGTAACAATCATACACAAGCTTTTACTAAGGATAACTGAAGAAGATAATGAAATACTTAAGTCTTTCAGAAAATTATACTGAAATTATTTGAGGGAAAATAATTCATTTAGTGAAAAGTTTATTGAGTCATAGTTGTTGAGCTTATTCCGGAAAAGGATCCATATTTACCTGCAATCAGATTGGTGAATTGGTCTCGTTATTGTATGAACAGCTTTATTATGAGAACAGTTCCTTTTTAGTTCTTGAACTGCACACAGTGACAATAGTTGGTTTTCAGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTATCTGGCTATTTCCAAAACTCAAAATATCAAGAAAGATTAGAACTTCTGTTAGTTTCATTTAAGATTGTGTCGATCAGTGTCAATGGTAGCTAATTGTTGTGTCTTATTAATCAATTTTCATTATAGCTTCTCATGTTTGTGTGAAATCAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTATTCAAAATCAGTCTCATTCTATTTCCTTCTAATATTGCTACTTGTGTTGATTACAAGGATAGAGTAACTTGTCCATATGTTACTTTGAGATTGTGGTCCATGTTAAAAAAGTAGTTGGTCAATTCGGCTTGGTTTAGAAGATCTCAAACATTGGTGTTTATTGTAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTATGATATTCTTACTTATCGGATTGTCTTTTCCCTCTTCATGTCCTTAGCTGGTCCCCTTATGCTCATGCTATGTTGTCATAGTAAAGGTTAAATTCAGATTTCTTTTCTGAAGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAGAGTTTTTAGGCCGTTTGTAGTTCAGGATATAAACGTGCTTACTAGAAGACGTTTCTGAATGCTTGACTTGTTAAGTAATGTCTATATAACCCAAGGGGTTTCTCGAGGATTTTTCCTTGTTGAGACCTGATTATAGTGCTGCAATAAGGTAAAGAAGAAGTCAAGATTAGAATGAGATAGATTCAATGAATTGTGAGTTGGAAAGTTTTGAATTGAAGTGCTGATTCATGCATAATCTAACTTTTGGTAAGCAGTTGCACTCTTACTCATCTAATTCATTTCTGAAGAGTTTCAGAGAATGATGCACCACAATTCTTTGTTTCTACTCATAGATGTGAGGTCCTTACTTCATCACAGAAATTGTTTATTAACTTGTATATGAAACGCATGTCTTATTATATTGTTGTAGTAGTACCAGTTTGGATAAAAGAATCACAAACTTTTGGGGGGTTGGCACTACATGAGATGAGTATGGTATCTTGACACTCTAAATTGCCACTATGATGCTCAAGAGGTTAGGAAATATATGTAGTCATATTGTCATTACATTGGTTGTCAATAGTTTATCTGTTCATGCTGCAGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGTACATTCTTTATAGTAACCTTTTTTACTTCACTTAATTAACATGGTATTATTGGTCGATTCTATCCCTTAGTCCCTTCTATCTAAGAACTAAGAAGTAGGGTATTATTGTTATGTTGTGTAAGCCACTGAACGTTTCCTTTTACAACTACAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGGTAATCCATTATTTATTGGCTCAAGTGATGTATAGTGGTTGCTTGAATACACGCTGTTTGACAATTGAAAAGTCATTTAAAATTGGCTGAAGTCTTAACTTCACCTTACCACCAGCCAAGAAAGCCTGCTTTAAATGCCTAAATGAAGATGAATTGACTTGAACAACTTCTGTTTCTGCCAGTTAGCTGATCCTTTTATGATTTTCTGTATCCACAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCAGTATGGAAATCTGTCTCTCTTTGAAATATGAGTAGCTAAGTTGTCTGATTTAGCATAGATCTTCTTATGATATGGATTTGGATTTCTATCATTTTTTGCAGTTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGTAGGGAATATGCAGGCCTTTTCTTGGTTCAATATTTTAAACATGAACTTGATTTTACTTATGTGATCAGCCTATAGCTAGAGAGTGAAATTGCAAAGCCATATATTTATTTTTACTTCTAATGCTTCTTGCGGTGAACCCTTCCTTTTATCACAGTTCAATGGTTCATGATTATTCTGTTGATTCTGTTTAGTCGGAACTTTTACTCGAAATTCTTTTATTGTACCTAAGCTTCAAATTATTAGTTCTTTTTTGTTCGGAAAAATTAGAAGTTGAGCTTTCCCTCATCCTTGATGAGTTCAATGGATTCTTGGAAGTTGATAAACTAGTAGTTTGACTCGGCTTTTTTTTTCTTGCAGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGTATGTAGACTAAGGAATTATGCACATAAAAAATTGTGGTTTCCATTGTTACATAATTAACAAGTATGAATTTTATGGGAGTATTAATACACTGTATTGTGGTAATGAAGGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGAGTTTGACAAGCTTAATCTTTACAAATTTCATTTATATGTATGTCCTGTTTTTCTTGTTTGCTTGCTAATTTTGATGCTTAATTTTTATCTTTCAGGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTATGCTTTTAGGTTATGGTTTATTGGATTTAAGATTGTTCATAGCTGACTGTTACGTCTTTGTGGCACATAGTTTAAAAGATTTAAATAGTTCAAGTCATTTTATTACTTAGCTCTCGACATAATCATACACTATGGTGTGCATCAGTTGCAAATATTTCACCATCAATCTCCTCTAATTTACACATCCAATCCATGCACATACTTTCAAAACTGTGAACCAGACAAAAAATGAATTTCACTTGGCTGTAAAGGGAGAATGTATAACGCAATATTGTTTTATTAGAATAGTCACTGACAGGCTTTTGGTTTCAGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTGATTGCCATATTATTCTATAGCTCAGTATCCTGGACCTTCTTCTGGTGAATGCATGATTGAATTGTCAAATTTCTTTTTTAATCTCAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGAGTAAGTTCCATGTGTTCCTGTATACAACTCTACTATTAGATATCCCATTTTATGAAAACAATAGTTACGATTGATCTGCGTTATCATGTAGTAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGTGAGATTCATCAAAGTATTTTCTCTTTAACGCAAAACTTTGGCATTAGCATTATTCTTTTAAACCGTCATGTGCAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</genome_strand>
        <mrna_strand>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAG.........................................................................................................................................................GTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAG.........................................................................................................................................................................GTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGG...................................................................................................................GTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAG.........................................................................................................................................................GATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAG.........................................................................................................................................................................................................................CTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCA.....................................................................................................TTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGG.......................................................................................................................................................................................................................................................................................................................................................................GGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAA..............................................................................................................GCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGA...................................................................................................GTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGG...........................................................................................................................................................................................................................................................................................................................GTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAG..........................................................................................GTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGA...........................................................................................TAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAG.............................................................................GCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>9</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="10096" PGL_stop="10747"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10096" e_stop="10747"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="10096" e_stop="10747" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10096" stop="10747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592852" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCCACACCTTTTAAATAAAAAATGTCCAACTCTGCTCACTATTTGCCTTGCTTCTAGCGCAAGACTGGAATTGTAAACACAAGGCAAACCTAGTCCCTTATGATATTGGAACGATACAGAAAAAATTAGCATAGTTCTCGCACAAAGTTAACATTGCACAAATTGAGAAACCTAAGACTAGCCTTTGGGATTGAAGAATGAGGCTGGAAAATACACACCATTTAACCAAATCTTTACAAAAAGTAGTCATTACTCATTAGCATGGTAATGATCAGGACGCTGCGTAGAAACTGTGAAATTAGGTCTTAGGCCTAACTCACACCCCAAAAGCTAGCTCAAAGGGAGGAGGATTGTCCAACCCTTATAAGAAGTCTATCCATCTCATTAACCACTGATGTGAGACTTTTGTCATTCTTTAACAAATGTTATTTTCATTTTATTTTAACTAAGCATTTGTGCACCAGAGTTCATGGATTGATGAGGCTGGCATGCCCTAATAGAGCTTGAATTATAATTCATTGGCCCCCCTGGTGATGACATTGCTGTTGAAAATCCAGAAATCATCGGCCTATTATTAACCGCGGCTTGCTCTAGTGATTGAAGTTGCTTCTTTAAAAACTTAACATAATGGACAGCCTCATCTAACATTG</gDNA_template>
            <first_frame> N  P  H  L  L  N  K  K  C  P  T  L  L  T  I  C  L  A  S  S  A  R  L  E  L  *  T  Q  G  K  P  S  P  L  *  Y  W  N  D  T  E  K  I  S  I  V  L  A  Q  S  *  H  C  T  N  *  E  T  *  D  *  P  L  G  L  K  N  E  A  G  K  Y  T  P  F  N  Q  I  F  T  K  S  S  H  Y  S  L  A  W  *  *  S  G  R  C  V  E  T  V  K  L  G  L  R  P  N  S  H  P  K  S  *  L  K  G  R  R  I  V  Q  P  L  *  E  V  Y  P  S  H  *  P  L  M  *  D  F  C  H  S  L  T  N  V  I  F  I  L  F  *  L  S  I  C  A  P  E  F  M  D  *  *  G  W  H  A  L  I  E  L  E  L  *  F  I  G  P  P  G  D  D  I  A  V  E  N  P  E  I  I  G  L  L  L  T  A  A  C  S  S  D  *  S  C  F  F  K  N  L  T  *  W  T  A  S  S  N  I  </first_frame>
            <second_frame>  T  H  T  F  *  I  K  N  V  Q  L  C  S  L  F  A  L  L  L  A  Q  D  W  N  C  K  H  K  A  N  L  V  P  Y  D  I  G  T  I  Q  K  K  L  A  *  F  S  H  K  V  N  I  A  Q  I  E  K  P  K  T  S  L  W  D  *  R  M  R  L  E  N  T  H  H  L  T  K  S  L  Q  K  V  V  I  T  H  *  H  G  N  D  Q  D  A  A  *  K  L  *  N  *  V  L  G  L  T  H  T  P  K  A  S  S  K  G  G  G  L  S  N  P  Y  K  K  S  I  H  L  I  N  H  *  C  E  T  F  V  I  L  *  Q  M  L  F  S  F  Y  F  N  *  A  F  V  H  Q  S  S  W  I  D  E  A  G  M  P  *  *  S  L  N  Y  N  S  L  A  P  L  V  M  T  L  L  L  K  I  Q  K  S  S  A  Y  Y  *  P  R  L  A  L  V  I  E  V  A  S  L  K  T  *  H  N  G  Q  P  H  L  T  L </second_frame>
            <third_frame>   P  T  P  F  K  *  K  M  S  N  S  A  H  Y  L  P  C  F  *  R  K  T  G  I  V  N  T  R  Q  T  *  S  L  M  I  L  E  R  Y  R  K  N  *  H  S  S  R  T  K  L  T  L  H  K  L  R  N  L  R  L  A  F  G  I  E  E  *  G  W  K  I  H  T  I  *  P  N  L  Y  K  K  *  S  L  L  I  S  M  V  M  I  R  T  L  R  R  N  C  E  I  R  S  *  A  *  L  T  P  Q  K  L  A  Q  R  E  E  D  C  P  T  L  I  R  S  L  S  I  S  L  T  T  D  V  R  L  L  S  F  F  N  K  C  Y  F  H  F  I  L  T  K  H  L  C  T  R  V  H  G  L  M  R  L  A  C  P  N  R  A  *  I  I  I  H  W  P  P  W  *  *  H  C  C  *  K  S  R  N  H  R  P  I  I  N  R  G  L  L  *  *  L  K  L  L  L  *  K  L  N  I  M  D  S  L  I  *  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0104A12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11308" PGL_stop="10538"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11308" e_stop="10538"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="11308" e_stop="10538" e_length="771"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11308" stop="10538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578043" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAACACTTCTCATAGTGTGGTATCCCTTTTAGCCCATCTTTCATTCTAATATTTCTATATATCCTCTTGTTTTTTTATTTTTACCTTACAAAAACAAATCATGGATTTACAAAATATTGCTCACTCACTAGAACTTGGATTCTCCAATAGCAATATTGAAATGATACCTTTACAATCACCACTCCATAACTCCAATTACTTAATGAATTCTCCTCCATCTAATTTCTCATTCATGGGCAATCCAATTGAAGAGCCAGCCGCGATGCCAATACTCTCATCGATCGATGAAATTATAGCATCGACTCATGGTAATGGAAATGATTACTCATGTTTGCAGAGGAGGAATTCTATGGAGGCTATGAGGGAGATGATTTTTCGTATCGCGATGATGCAACCAATTCACATTGATCCAGAATCAGTTAAACCTCCCAAGAGGAAAAATGTTAAGATATCGAAGGATCCACAGAGTGTGGCAGCCAGGCATCGGAGGGAACGAATAAGCGAAAGGATAAGGATTTTGCAAAGACTAGTCCCTGGAGGAACTAAAATGGATACTGCTTCAATGTTAGATGAGGCTGTCCATTATGTTAAGTTTTTAAAGAAGCAACTTCAATCACTAGAGCAAGCCGCGGTTAATAATAGGCCGATGATTTCTGGATTTTCAACAGCAATGTCATCACCAGGGGGGCCAATGAATTATAATTCAAGCTCTATTAGGGCATGCCAGCCTCATCAATCCATGAACTCTGGTGCACAAATGCTTAGTTAAA</gDNA_template>
            <first_frame> G  T  L  L  I  V  W  Y  P  F  *  P  I  F  H  S  N  I  S  I  Y  P  L  V  F  L  F  L  P  Y  K  N  K  S  W  I  Y  K  I  L  L  T  H  *  N  L  D  S  P  I  A  I  L  K  *  Y  L  Y  N  H  H  S  I  T  P  I  T  *  *  I  L  L  H  L  I  S  H  S  W  A  I  Q  L  K  S  Q  P  R  C  Q  Y  S  H  R  S  M  K  L  *  H  R  L  M  V  M  E  M  I  T  H  V  C  R  G  G  I  L  W  R  L  *  G  R  *  F  F  V  S  R  *  C  N  Q  F  T  L  I  Q  N  Q  L  N  L  P  R  G  K  M  L  R  Y  R  R  I  H  R  V  W  Q  P  G  I  G  G  N  E  *  A  K  G  *  G  F  C  K  D  *  S  L  E  E  L  K  W  I  L  L  Q  C  *  M  R  L  S  I  M  L  S  F  *  R  S  N  F  N  H  *  S  K  P  R  L  I  I  G  R  *  F  L  D  F  Q  Q  Q  C  H  H  Q  G  G  Q  *  I  I  I  Q  A  L  L  G  H  A  S  L  I  N  P  *  T  L  V  H  K  C  L  V  K </first_frame>
            <second_frame>  E  H  F  S  *  C  G  I  P  F  S  P  S  F  I  L  I  F  L  Y  I  L  L  F  F  Y  F  Y  L  T  K  T  N  H  G  F  T  K  Y  C  S  L  T  R  T  W  I  L  Q  *  Q  Y  *  N  D  T  F  T  I  T  T  P  *  L  Q  L  L  N  E  F  S  S  I  *  F  L  I  H  G  Q  S  N  *  R  A  S  R  D  A  N  T  L  I  D  R  *  N  Y  S  I  D  S  W  *  W  K  *  L  L  M  F  A  E  E  E  F  Y  G  G  Y  E  G  D  D  F  S  Y  R  D  D  A  T  N  S  H  *  S  R  I  S  *  T  S  Q  E  E  K  C  *  D  I  E  G  S  T  E  C  G  S  Q  A  S  E  G  T  N  K  R  K  D  K  D  F  A  K  T  S  P  W  R  N  *  N  G  Y  C  F  N  V  R  *  G  C  P  L  C  *  V  F  K  E  A  T  S  I  T  R  A  S  R  G  *  *  *  A  D  D  F  W  I  F  N  S  N  V  I  T  R  G  A  N  E  L  *  F  K  L  Y  *  G  M  P  A  S  S  I  H  E  L  W  C  T  N  A  *  L   </second_frame>
            <third_frame>   N  T  S  H  S  V  V  S  L  L  A  H  L  S  F  *  Y  F  Y  I  S  S  C  F  F  I  F  T  L  Q  K  Q  I  M  D  L  Q  N  I  A  H  S  L  E  L  G  F  S  N  S  N  I  E  M  I  P  L  Q  S  P  L  H  N  S  N  Y  L  M  N  S  P  P  S  N  F  S  F  M  G  N  P  I  E  E  P  A  A  M  P  I  L  S  S  I  D  E  I  I  A  S  T  H  G  N  G  N  D  Y  S  C  L  Q  R  R  N  S  M  E  A  M  R  E  M  I  F  R  I  A  M  M  Q  P  I  H  I  D  P  E  S  V  K  P  P  K  R  K  N  V  K  I  S  K  D  P  Q  S  V  A  A  R  H  R  R  E  R  I  S  E  R  I  R  I  L  Q  R  L  V  P  G  G  T  K  M  D  T  A  S  M  L  D  E  A  V  H  Y  V  K  F  L  K  K  Q  L  Q  S  L  E  Q  A  A  V  N  N  R  P  M  I  S  G  F  S  T  A  M  S  S  P  G  G  P  M  N  Y  N  S  S  S  I  R  A  C  Q  P  H  Q  S  M  N  S  G  A  Q  M  L  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11258" stop="10539"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFYISSCFFIFTLQKQIMDLQNIAHSLELGFSNSNIEMIPLQSPLHNSNYLMNSPPSNFSFMGNPIEEPAAMPILSSIDEIIASTHGNGNDYSCLQRRNSMEAMREMIFRIAMMQPIHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAVHYVKFLKKQLQSLEQAAVNNRPMISGFSTAMSSPGGPMNYNSSSIRACQPHQSMNSGAQMLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17649" PGL_stop="18274"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17649" e_stop="17977"/>
            <exon e_start="18069" e_stop="18274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.939" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17649" e_stop="17977" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.939">
            <gDNA_intron_boundary i_start="17978" i_stop="18068" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18069" e_stop="18274" e_length="206"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17649" stop="17977"/>
              <exon start="18069" stop="18274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600741" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGCAGTAGCTGCAACAAGTCCTTCTGCAGCAATTATATGCTACTAAAGCCAGAAGAATGTAGTGTATCTGATTTGGCAAAAATTTTGTTTTCCAGCAAAAATTTGGGACAAAAAGAATTCGTTGATGTAGACATCCCTAATGAAGAATTGAACATGACCAAGGAGCCTTTGTCACGTAGATGGGTGTTTTTTATTTCCATTCTAGTCCAGAAGGTTTTAATCAAAATTTCTAAACCTTTAGCAGGGTTTGGCAATACAATTGAATACTGGCTTAACCTTCAGAACGTCAACGGTGGCTTCTTCCGTCTTATTTTCAACTCCTTAAGAG : GTAGAGCTGTAATACCGGATAAGGAATCAGCAGAGTACTTGTCATTTATTGGAAATTTGGATAAAAGATTTGAGCTGGATTTTAGTAAGATTGTTGAAGAAGTTGGAGGATGTAAAAGATATGATGAGGCAATCAGCATAATGGCTGCAAAAGCTGCTTACGAGAACAAAGCATGGATTCAAAATACTGTCAACCAACACTGGAAG</gDNA_template>
            <first_frame> E  Q  *  L  Q  Q  V  L  L  Q  Q  L  Y  A  T  K  A  R  R  M  *  C  I  *  F  G  K  N  F  V  F  Q  Q  K  F  G  T  K  R  I  R  *  C  R  H  P  *  *  R  I  E  H  D  Q  G  A  F  V  T  *  M  G  V  F  Y  F  H  S  S  P  E  G  F  N  Q  N  F  *  T  F  S  R  V  W  Q  Y  N  *  I  L  A  *  P  S  E  R  Q  R  W  L  L  P  S  Y  F  Q  L  L  K  R :   *  S  C  N  T  G  *  G  I  S  R  V  L  V  I  Y  W  K  F  G  *  K  I  *  A  G  F  *  *  D  C  *  R  S  W  R  M  *  K  I  *  *  G  N  Q  H  N  G  C  K  S  C  L  R  E  Q  S  M  D  S  K  Y  C  Q  P  T  L  E  </first_frame>
            <second_frame>  S  S  S  C  N  K  S  F  C  S  N  Y  M  L  L  K  P  E  E  C  S  V  S  D  L  A  K  I  L  F  S  S  K  N  L  G  Q  K  E  F  V  D  V  D  I  P  N  E  E  L  N  M  T  K  E  P  L  S  R  R  W  V  F  F  I  S  I  L  V  Q  K  V  L  I  K  I  S  K  P  L  A  G  F  G  N  T  I  E  Y  W  L  N  L  Q  N  V  N  G  G  F  F  R  L  I  F  N  S  L  R   : G  R  A  V  I  P  D  K  E  S  A  E  Y  L  S  F  I  G  N  L  D  K  R  F  E  L  D  F  S  K  I  V  E  E  V  G  G  C  K  R  Y  D  E  A  I  S  I  M  A  A  K  A  A  Y  E  N  K  A  W  I  Q  N  T  V  N  Q  H  W  K </second_frame>
            <third_frame>   A  V  A  A  T  S  P  S  A  A  I  I  C  Y  *  S  Q  K  N  V  V  Y  L  I  W  Q  K  F  C  F  P  A  K  I  W  D  K  K  N  S  L  M  *  T  S  L  M  K  N  *  T  *  P  R  S  L  C  H  V  D  G  C  F  L  F  P  F  *  S  R  R  F  *  S  K  F  L  N  L  *  Q  G  L  A  I  Q  L  N  T  G  L  T  F  R  T  S  T  V  A  S  S  V  L  F  S  T  P  *  E  :  V  E  L  *  Y  R  I  R  N  Q  Q  S  T  C  H  L  L  E  I  W  I  K  D  L  S  W  I  L  V  R  L  L  K  K  L  E  D  V  K  D  M  M  R  Q  S  A  *  W  L  Q  K  L  L  T  R  T  K  H  G  F  K  I  L  S  T  N  T  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17650" stop="17977"/>
                    <exon start="18069" stop="18274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSSCNKSFCSNYMLLKPEECSVSDLAKILFSSKNLGQKEFVDVDIPNEELNMTKEPLSRRWVFFISILVQKVLIKISKPLAGFGNTIEYWLNLQNVNGGFFRLIFNSLRGRAVIPDKESAEYLSFIGNLDKRFELDFSKIVEEVGGCKRYDEAISIMAAKAAYENKAWIQNTVNQHWK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="22054" PGL_stop="26481"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22054" e_stop="22460"/>
            <exon e_start="22540" e_stop="22736"/>
            <exon e_start="23283" e_stop="23316"/>
            <exon e_start="25212" e_stop="25565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.998"/>
          <exon-intron don_prob="0.996" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="22054" e_stop="22460" e_length="407"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="22461" i_stop="22539" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22540" e_stop="22736" e_length="197"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.946">
            <gDNA_intron_boundary i_start="22737" i_stop="23282" i_length="546"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23283" e_stop="23316" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23317" i_stop="25211" i_length="1895"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="25212" e_stop="25565" e_length="354"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22054" stop="22460"/>
              <exon start="22540" stop="22736"/>
              <exon start="23283" stop="23316"/>
              <exon start="25212" stop="25565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575840" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATACAATACAAGCTGGAATGCACTTCTCTTCTATAAATAAATAAATAAATTACTTTACCAAATAATAATCATCGATCTGCAGTATATGGCGAGCAATAGTTGCAACAAATCTTTCTGTAGCAACTATATGTTGCTAAAGCCAGAAGAATGTAGCGTATTAGATTTGGCAAAACTTTTACTTTCCGGTAAAAAATTGGGACAAAAAGACTTCATCGACTGCCCTAATGAAGAAATGACTAAGGAGCCTTTGTCACGTAGATGGGTTATATTTTTATCTATACTAGTCCAGAAGATTTTACTCGCAACTGCTAAGCCTTTAGCTGGATTGGGCAATGCTATTGAGTACTGGCTTAACCTTCAAAACGTCAATGGCGGATTCTTCCGTCTTCTTTTCAAATCCTTAATAT : GTAAAGCTGTATCACCGGATAAGGAATCAGCTGCGTACTTGTCATTTATTGGAAATTTGGATAAAAGAGTTGATCTGGATTTTAGTAAGAATGTTGGAGGACGTAGAAGATATGATGAAGGAATCAGCATGATGGCTGCAAAAGCAGCTTATGAGAACAAAGCATATGTTGAAACTACTGTCAACCATCATTGGAAG : ATGGATCTGGTGGGATCATTTGACTTCTGGAATG : ATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAGGTGGAG</gDNA_template>
            <first_frame> I  Q  Y  K  L  E  C  T  S  L  L  *  I  N  K  *  I  T  L  P  N  N  N  H  R  S  A  V  Y  G  E  Q  *  L  Q  Q  I  F  L  *  Q  L  Y  V  A  K  A  R  R  M  *  R  I  R  F  G  K  T  F  T  F  R  *  K  I  G  T  K  R  L  H  R  L  P  *  *  R  N  D  *  G  A  F  V  T  *  M  G  Y  I  F  I  Y  T  S  P  E  D  F  T  R  N  C  *  A  F  S  W  I  G  Q  C  Y  *  V  L  A  *  P  S  K  R  Q  W  R  I  L  P  S  S  F  Q  I  L  N  M :   *  S  C  I  T  G  *  G  I  S  C  V  L  V  I  Y  W  K  F  G  *  K  S  *  S  G  F  *  *  E  C  W  R  T  *  K  I  *  *  R  N  Q  H  D  G  C  K  S  S  L  *  E  Q  S  I  C  *  N  Y  C  Q  P  S  L  E   : D  G  S  G  G  I  I  *  L  L  E  * :   L  S  R  E  S  Y  N  T  S  I  R  A  S  R  *  K  R  G  P  *  A  D  Y  C  C  I  *  R  N  *  I  L  Q  F  *  *  L  D  F  *  L  *  S  L  L  V  *  H  S  R  H  G  Q  S  P  C  R  I  Y  E  S  S  R  L  T  K  E  P  G  M  A  Q  K  Y  C  T  N  *  Y  *  *  Y  *  S  A  T  S  S  L  L  F  P  K  K  I  A  Q  T  T  S  G  E  K  *  K  G  K  V  F  S  Y  R  S  Q  L  R  W   </first_frame>
            <second_frame>  Y  N  T  S  W  N  A  L  L  F  Y  K  *  I  N  K  L  L  Y  Q  I  I  I  I  D  L  Q  Y  M  A  S  N  S  C  N  K  S  F  C  S  N  Y  M  L  L  K  P  E  E  C  S  V  L  D  L  A  K  L  L  L  S  G  K  K  L  G  Q  K  D  F  I  D  C  P  N  E  E  M  T  K  E  P  L  S  R  R  W  V  I  F  L  S  I  L  V  Q  K  I  L  L  A  T  A  K  P  L  A  G  L  G  N  A  I  E  Y  W  L  N  L  Q  N  V  N  G  G  F  F  R  L  L  F  K  S  L  I   : C  K  A  V  S  P  D  K  E  S  A  A  Y  L  S  F  I  G  N  L  D  K  R  V  D  L  D  F  S  K  N  V  G  G  R  R  R  Y  D  E  G  I  S  M  M  A  A  K  A  A  Y  E  N  K  A  Y  V  E  T  T  V  N  H  H  W  K  :  M  D  L  V  G  S  F  D  F  W  N   : D  Y  Q  E  K  A  T  T  Q  A  F  V  L  Q  D  K  S  V  D  P  E  L  I  I  V  A  F  R  G  T  E  F  F  N  S  D  D  W  I  S  D  F  N  L  S  W  Y  D  I  P  G  M  G  K  V  H  A  G  F  M  K  A  L  G  L  Q  K  S  L  G  W  P  K  N  I  V  Q  T  D  T  N  N  I  N  Q  P  P  P  A  Y  Y  F  L  R  K  L  L  K  Q  L  L  E  K  N  E  K  A  R  F  L  V  T  G  H  S  L  G  G  </second_frame>
            <third_frame>   T  I  Q  A  G  M  H  F  S  S  I  N  K  *  I  N  Y  F  T  K  *  *  S  S  I  C  S  I  W  R  A  I  V  A  T  N  L  S  V  A  T  I  C  C  *  S  Q  K  N  V  A  Y  *  I  W  Q  N  F  Y  F  P  V  K  N  W  D  K  K  T  S  S  T  A  L  M  K  K  *  L  R  S  L  C  H  V  D  G  L  Y  F  Y  L  Y  *  S  R  R  F  Y  S  Q  L  L  S  L  *  L  D  W  A  M  L  L  S  T  G  L  T  F  K  T  S  M  A  D  S  S  V  F  F  S  N  P  *  Y  :  V  K  L  Y  H  R  I  R  N  Q  L  R  T  C  H  L  L  E  I  W  I  K  E  L  I  W  I  L  V  R  M  L  E  D  V  E  D  M  M  K  E  S  A  *  W  L  Q  K  Q  L  M  R  T  K  H  M  L  K  L  L  S  T  I  I  G  R :   W  I  W  W  D  H  L  T  S  G  M  :  I  I  K  R  K  L  Q  H  K  H  S  C  F  K  I  K  A  W  T  L  S  *  L  L  L  H  L  E  E  L  N  S  S  I  L  M  I  G  F  L  T  L  I  S  L  G  M  T  F  P  A  W  A  K  S  M  P  D  L  *  K  L  S  A  Y  K  R  A  W  D  G  P  K  I  L  Y  K  L  I  L  I  I  L  I  S  H  L  Q  P  T  I  S  *  E  N  C  S  N  N  F  W  R  K  M  K  R  Q  G  F  *  L  P  V  T  A  *  V  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22094" stop="22460"/>
                    <exon start="22540" stop="22736"/>
                    <exon start="23283" stop="23316"/>
                    <exon start="25212" stop="25564"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>951</number_coding_nucleotides>
                  <number_encoded_amino_acids>317</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INKLLYQIIIIDLQYMASNSCNKSFCSNYMLLKPEECSVLDLAKLLLSGKKLGQKDFIDCPNEEMTKEPLSRRWVIFLSILVQKILLATAKPLAGLGNAIEYWLNLQNVNGGFFRLLFKSLICKAVSPDKESAAYLSFIGNLDKRVDLDFSKNVGGRRRYDEGISMMAAKAAYENKAYVETTVNHHWKMDLVGSFDFWNDYQEKATTQAFVLQDKSVDPELIIVAFRGTEFFNSDDWISDFNLSWYDIPGMGKVHAGFMKALGLQKSLGWPKNIVQTDTNNINQPPPAYYFLRKLLKQLLEKNEKARFLVTGHSLGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24949" e_stop="25837"/>
            <exon e_start="26020" e_stop="26481"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24949" e_stop="25837" e_length="889"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="25838" i_stop="26019" i_length="182"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="26020" e_stop="26481" e_length="462"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24949" stop="25837"/>
              <exon start="26020" stop="26481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575841" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATTACCCGGGGGTCATAGCGAGGAGACCAAATAATGCGCACACACACGTTGTGGGACCCTACACCTACTTGAAGCATCAATCACATAATGGGGAGCACCACCCCTGTGATCTGAATTTAATCCAAATTTGCTTGTAAATTCGAATTGAACAAGAAATAATTGAACACATCATCAATGATGTGTGGGTGTCGTTTTAGTAGGGAACAAATTATTCCTTATCTTGAATTTTCCTTATTTTGTTTTTTTATTGGATTTGAACAGATTATCAAGAGAAAGCTACAACACAAGCATTCGTGCTTCAAGATAAAAGCGTGGACCCTGAGCTGATTATTGTTGCATTTAGAGGAACTGAATTCTTCAATTCTGATGATTGGATTTCTGACTTTAATCTCTCTTGGTATGACATTCCCGGCATGGGCAAAGTCCATGCCGGATTTATGAAAGCTCTCGGCTTACAAAAGAGCCTGGGATGGCCCAAAAATATTGTACAAACTGATACTAATAATATTAATCAGCCACCTCCAGCCTACTATTTCCTAAGAAAATTGCTCAAACAACTTCTGGAGAAAAATGAAAAGGCAAGGTTTTTAGTTACCGGTCACAGCTTAGGTGGAGCACTTGCAATTTTGTTTCCAGCAATATTAGCATTCCATGAGGAATCTTGGCTGTTGAAAAGATTAGGGGGCATTTACACATTTGGTCAACCAAGAGTTGGAGATGAAAGTTTTATTGAATATATGAATGGACAATTAACAAAACATGAGGTTCCATACTACAGAGTTGTGTACAGCAATGACATGGTACCAAGATTGCCATTTGACAATTCTACTTTCTTGTTCAAGCACTTTGGAACTTGCATCTATTACAATAGCCTCTACAGAGAAAAA : ATTTTAGTTGAAGAACCAGACAAGAATGGGTCGTTTCTGTTAATGTTTATACCAAAGATGTTAAACGCAGCTTGGGAGCTGATCAGAAGCTGTATTCTACCATGTGTACACGGACGAAAGTATCAGGAAGGCGGGCTTCTTTTATGCATGAGAGTGATTGGCTTGCTATTCCCAGGCATGCCTGCTCATTGTCCTCAGGATTATGTTAACTCTACCAGGCTTGGATCATCTGATCATTCCACTGAAGACGTTGCAAAGTATCAAAAGATTGGCATAGTACCAGCATAATTATAAAATAATTAACTACCCAGTGTGTGCTTTTTAGAATTTCTTATCCTACATATTAGTTTTTCCCTGCACCAATGTATTATTAGATATTTAATTGATTTGAAGCTTGAATCGAGTCCTTGGAGAACAAAGTGAAAAATTCATTTTATCCAATGGAATATATACTTGAGTTCT</gDNA_template>
            <first_frame> K  L  P  G  G  H  S  E  E  T  K  *  C  A  H  T  R  C  G  T  L  H  L  L  E  A  S  I  T  *  W  G  A  P  P  L  *  S  E  F  N  P  N  L  L  V  N  S  N  *  T  R  N  N  *  T  H  H  Q  *  C  V  G  V  V  L  V  G  N  K  L  F  L  I  L  N  F  P  Y  F  V  F  L  L  D  L  N  R  L  S  R  E  S  Y  N  T  S  I  R  A  S  R  *  K  R  G  P  *  A  D  Y  C  C  I  *  R  N  *  I  L  Q  F  *  *  L  D  F  *  L  *  S  L  L  V  *  H  S  R  H  G  Q  S  P  C  R  I  Y  E  S  S  R  L  T  K  E  P  G  M  A  Q  K  Y  C  T  N  *  Y  *  *  Y  *  S  A  T  S  S  L  L  F  P  K  K  I  A  Q  T  T  S  G  E  K  *  K  G  K  V  F  S  Y  R  S  Q  L  R  W  S  T  C  N  F  V  S  S  N  I  S  I  P  *  G  I  L  A  V  E  K  I  R  G  H  L  H  I  W  S  T  K  S  W  R  *  K  F  Y  *  I  Y  E  W  T  I  N  K  T  *  G  S  I  L  Q  S  C  V  Q  Q  *  H  G  T  K  I  A  I  *  Q  F  Y  F  L  V  Q  A  L  W  N  L  H  L  L  Q  *  P  L  Q  R  K   : N  F  S  *  R  T  R  Q  E  W  V  V  S  V  N  V  Y  T  K  D  V  K  R  S  L  G  A  D  Q  K  L  Y  S  T  M  C  T  R  T  K  V  S  G  R  R  A  S  F  M  H  E  S  D  W  L  A  I  P  R  H  A  C  S  L  S  S  G  L  C  *  L  Y  Q  A  W  I  I  *  S  F  H  *  R  R  C  K  V  S  K  D  W  H  S  T  S  I  I  I  K  *  L  T  T  Q  C  V  L  F  R  I  S  Y  P  T  Y  *  F  F  P  A  P  M  Y  Y  *  I  F  N  *  F  E  A  *  I  E  S  L  E  N  K  V  K  N  S  F  Y  P  M  E  Y  I  L  E  F  </first_frame>
            <second_frame>  N  Y  P  G  V  I  A  R  R  P  N  N  A  H  T  H  V  V  G  P  Y  T  Y  L  K  H  Q  S  H  N  G  E  H  H  P  C  D  L  N  L  I  Q  I  C  L  *  I  R  I  E  Q  E  I  I  E  H  I  I  N  D  V  W  V  S  F  *  *  G  T  N  Y  S  L  S  *  I  F  L  I  L  F  F  Y  W  I  *  T  D  Y  Q  E  K  A  T  T  Q  A  F  V  L  Q  D  K  S  V  D  P  E  L  I  I  V  A  F  R  G  T  E  F  F  N  S  D  D  W  I  S  D  F  N  L  S  W  Y  D  I  P  G  M  G  K  V  H  A  G  F  M  K  A  L  G  L  Q  K  S  L  G  W  P  K  N  I  V  Q  T  D  T  N  N  I  N  Q  P  P  P  A  Y  Y  F  L  R  K  L  L  K  Q  L  L  E  K  N  E  K  A  R  F  L  V  T  G  H  S  L  G  G  A  L  A  I  L  F  P  A  I  L  A  F  H  E  E  S  W  L  L  K  R  L  G  G  I  Y  T  F  G  Q  P  R  V  G  D  E  S  F  I  E  Y  M  N  G  Q  L  T  K  H  E  V  P  Y  Y  R  V  V  Y  S  N  D  M  V  P  R  L  P  F  D  N  S  T  F  L  F  K  H  F  G  T  C  I  Y  Y  N  S  L  Y  R  E  K  :  I  L  V  E  E  P  D  K  N  G  S  F  L  L  M  F  I  P  K  M  L  N  A  A  W  E  L  I  R  S  C  I  L  P  C  V  H  G  R  K  Y  Q  E  G  G  L  L  L  C  M  R  V  I  G  L  L  F  P  G  M  P  A  H  C  P  Q  D  Y  V  N  S  T  R  L  G  S  S  D  H  S  T  E  D  V  A  K  Y  Q  K  I  G  I  V  P  A  *  L  *  N  N  *  L  P  S  V  C  F  L  E  F  L  I  L  H  I  S  F  S  L  H  Q  C  I  I  R  Y  L  I  D  L  K  L  E  S  S  P  W  R  T  K  *  K  I  H  F  I  Q  W  N  I  Y  L  S  S </second_frame>
            <third_frame>   I  T  R  G  S  *  R  G  D  Q  I  M  R  T  H  T  L  W  D  P  T  P  T  *  S  I  N  H  I  M  G  S  T  T  P  V  I  *  I  *  S  K  F  A  C  K  F  E  L  N  K  K  *  L  N  T  S  S  M  M  C  G  C  R  F  S  R  E  Q  I  I  P  Y  L  E  F  S  L  F  C  F  F  I  G  F  E  Q  I  I  K  R  K  L  Q  H  K  H  S  C  F  K  I  K  A  W  T  L  S  *  L  L  L  H  L  E  E  L  N  S  S  I  L  M  I  G  F  L  T  L  I  S  L  G  M  T  F  P  A  W  A  K  S  M  P  D  L  *  K  L  S  A  Y  K  R  A  W  D  G  P  K  I  L  Y  K  L  I  L  I  I  L  I  S  H  L  Q  P  T  I  S  *  E  N  C  S  N  N  F  W  R  K  M  K  R  Q  G  F  *  L  P  V  T  A  *  V  E  H  L  Q  F  C  F  Q  Q  Y  *  H  S  M  R  N  L  G  C  *  K  D  *  G  A  F  T  H  L  V  N  Q  E  L  E  M  K  V  L  L  N  I  *  M  D  N  *  Q  N  M  R  F  H  T  T  E  L  C  T  A  M  T  W  Y  Q  D  C  H  L  T  I  L  L  S  C  S  S  T  L  E  L  A  S  I  T  I  A  S  T  E  K  K :   F  *  L  K  N  Q  T  R  M  G  R  F  C  *  C  L  Y  Q  R  C  *  T  Q  L  G  S  *  S  E  A  V  F  Y  H  V  Y  T  D  E  S  I  R  K  A  G  F  F  Y  A  *  E  *  L  A  C  Y  S  Q  A  C  L  L  I  V  L  R  I  M  L  T  L  P  G  L  D  H  L  I  I  P  L  K  T  L  Q  S  I  K  R  L  A  *  Y  Q  H  N  Y  K  I  I  N  Y  P  V  C  A  F  *  N  F  L  S  Y  I  L  V  F  P  C  T  N  V  L  L  D  I  *  L  I  *  S  L  N  R  V  L  G  E  Q  S  E  K  F  I  L  S  N  G  I  Y  T  *  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25208" stop="25837"/>
                    <exon start="26020" stop="26307"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDYQEKATTQAFVLQDKSVDPELIIVAFRGTEFFNSDDWISDFNLSWYDIPGMGKVHAGFMKALGLQKSLGWPKNIVQTDTNNINQPPPAYYFLRKLLKQLLEKNEKARFLVTGHSLGGALAILFPAILAFHEESWLLKRLGGIYTFGQPRVGDESFIEYMNGQLTKHEVPYYRVVYSNDMVPRLPFDNSTFLFKHFGTCIYYNSLYREKILVEEPDKNGSFLLMFIPKMLNAAWELIRSCILPCVHGRKYQEGGLLLCMRVIGLLFPGMPAHCPQDYVNSTRLGSSDHSTEDVAKYQKIGIVPA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="31400" PGL_stop="38651"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31400" e_stop="31805"/>
            <exon e_start="31888" e_stop="31977"/>
            <exon e_start="33895" e_stop="33960"/>
            <exon e_start="34139" e_stop="34204"/>
            <exon e_start="34473" e_stop="34558"/>
            <exon e_start="34653" e_stop="34698"/>
            <exon e_start="34805" e_stop="34859"/>
            <exon e_start="36086" e_stop="36162"/>
            <exon e_start="36279" e_stop="36420"/>
            <exon e_start="36631" e_stop="36791"/>
            <exon e_start="36896" e_stop="37000"/>
            <exon e_start="37554" e_stop="37706"/>
            <exon e_start="38297" e_stop="38651"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.999" e_score="0.985"/>
          <exon-intron don_prob="0.902" acc_prob="0.872" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.585" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="31400" e_stop="31805" e_length="406"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31806" i_stop="31887" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31888" e_stop="31977" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.902" acc_prob="0.872">
            <gDNA_intron_boundary i_start="31978" i_stop="33894" i_length="1917"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33895" e_stop="33960" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="33961" i_stop="34138" i_length="178"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="34139" e_stop="34204" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="1.000">
            <gDNA_intron_boundary i_start="34205" i_stop="34472" i_length="268"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34473" e_stop="34558" e_length="86"/>
          </exon>
          <intron i_serial="5" don_prob="0.885" acc_prob="1.000">
            <gDNA_intron_boundary i_start="34559" i_stop="34652" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="34653" e_stop="34698" e_length="46"/>
          </exon>
          <intron i_serial="6" don_prob="0.899" acc_prob="0.996">
            <gDNA_intron_boundary i_start="34699" i_stop="34804" i_length="106"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="34805" e_stop="34859" e_length="55"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="34860" i_stop="36085" i_length="1226"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="36086" e_stop="36162" e_length="77"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.954">
            <gDNA_intron_boundary i_start="36163" i_stop="36278" i_length="116"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="36279" e_stop="36420" e_length="142"/>
          </exon>
          <intron i_serial="9" don_prob="0.585" acc_prob="0.997">
            <gDNA_intron_boundary i_start="36421" i_stop="36630" i_length="210"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="36631" e_stop="36791" e_length="161"/>
          </exon>
          <intron i_serial="10" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="36792" i_stop="36895" i_length="104"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="36896" e_stop="37000" e_length="105"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="37001" i_stop="37553" i_length="553"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="37554" e_stop="37706" e_length="153"/>
          </exon>
          <intron i_serial="12" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="37707" i_stop="38296" i_length="590"/>
          </intron>
          <exon e_serial="13" e_score="0.980">
            <gDNA_exon_boundary e_start="38297" e_stop="38651" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31400" stop="31805"/>
              <exon start="31888" stop="31977"/>
              <exon start="33895" stop="33960"/>
              <exon start="34139" stop="34204"/>
              <exon start="34473" stop="34558"/>
              <exon start="34653" stop="34698"/>
              <exon start="34805" stop="34859"/>
              <exon start="36086" stop="36162"/>
              <exon start="36279" stop="36420"/>
              <exon start="36631" stop="36791"/>
              <exon start="36896" stop="37000"/>
              <exon start="37554" stop="37706"/>
              <exon start="38297" stop="38651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGAGTGAGAGAGCGAATTAGGGTTTTGATAATCGGAATCAAGAAGGTCAGTGGAGCGCGTAAATCTAATTTAGTACTCGTTGTGATTTTAATTTCTTTGGTATCCGAAGATCTTAGAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTG : GTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAG : GAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAG : AATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAG : GAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGG : TTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAG : GATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTG : AATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAG : GAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAA : GAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAG : GATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAG : GTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGAT : TGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAAGAATGGGTGCTAATTCCATATCCAGGAGTAGA</gDNA_template>
            <first_frame> K  S  S  G  L  G  F  E  G  A  E  R  R  E  E  E  R  A  E  R  S  E  R  A  N  *  G  F  D  N  R  N  Q  E  G  Q  W  S  A  *  I  *  F  S  T  R  C  D  F  N  F  F  G  I  R  R  S  *  R  N  W  *  V  C  S  E  I  *  *  *  *  *  Y  L  C  V  R  K  R  C  V  S  V  T  C  R  K  N  R  L  V  *  A  I  R  L  *  R  E  V  W  *  D  R  E  S  E  L  S  V  Y  P  T  I  S  T  L  R  *  S  I  C  Q  T  S  F  R  Y  H  V  G  E  E  A  C   : G  F  R  H  P  M  G  R  G  Y  R  R  S  K  G  I  Y  D  Q  I  W  R  F  R  G  L  Y  C  D  E   : G  T  C  Y  W  S  F  S  W  I  R  L  C  H  I  C  Y  S  *  G  C  *   : E  C  I  V  *  G  A  L  S  W  K  Q  N  A  R  S  E  S  G  D  T  E   : G  G  D  E  G  S  C  K  E  S  D  Q  D  F  R  C  *  D  S  S  V  C  V  *  S  Y  F  Q  R  :  L  F  *  E  V  R  *  N  N  R  S  V  H  A  K   : G  S  I  Y  Q  G  T  S  W  N  W  V  Y  Y  F  C  K  C  * :   I  S  *  *  S  D  E  *  H  P  *  T  G  R  F  H  N  C  G  G  P  S  N  T  Q   : G  R  R  F  Q  T  C  *  S  D  V  S  E  W  R  R  I  W  C  I  *  C  I  Y  E  C  N  Y  *  I  W  C  A  W  C  S  Y  L  I  *  S  S  *  F  Y  V  W  K :   R  W  R  W  R  W  R  W  R  W  R  I  S  I  S  W  W  L  G  P  E  D  L  C  W  S  T  T  S  R  G  N  N  *  R  S  S  P  V  F  W  *  I  W  P  C  F  R  C  V  C  P  K   : G  S  K  K  T  R  A  *  R  V  W  F  C  Y  I  C  *  *  W  C  C  R  S  C  F  S  K  A  S  *  D  M  W  T  S   : G  C  N  *  F  C  Y  S  S  *  *  C  W  S  K  *  Q  L  H  D  G  S  S  S  S  C  S  *  S  I  W  G  I  W  W  S  Y  A  Y  L  W  K  D  V  W  G  P  R  L  *  *   : L  G  L  R  P  G  W  W  E  T  F  K  I  R  Y  E  I  Q  A  L  L  A  G  L  V  G  *  E  A  V  K  I  R  Y  E  I  Q  A  L  V  A  L  C  C  R  R  S  E  A  V  *  I  S  N  G  *  Q  Q  *  I  C  H  I  Y  I  S  L  L  L  G  G  H  H  N  T  C  A  T  N  T  *  V  I  E  K  A  V  L  M  D  C  A  I  H  F  I  L  D  P  L  Y  *  M  Y  *  R  N  K  E  W  V  L  I  P  Y  P  G  V   </first_frame>
            <second_frame>  R  A  V  A  W  G  L  K  E  L  S  G  A  R  K  S  E  R  S  G  V  R  E  R  I  R  V  L  I  I  G  I  K  K  V  S  G  A  R  K  S  N  L  V  L  V  V  I  L  I  S  L  V  S  E  D  L  R  E  I  G  E  F  V  L  K  Y  D  D  D  D  D  I  C  V  *  E  R  G  V  C  L  L  P  A  G  R  I  V  L  C  E  R  F  V  Y  R  E  R  C  G  E  I  A  R  A  S  *  V  Y  I  L  R  F  P  L  S  A  N  Q  F  V  R  Q  V  F  V  T  M  S  E  K  K  L  V  :  V  L  G  I  P  W  D  V  D  T  E  G  L  R  E  Y  M  I  K  Y  G  D  L  E  D  C  I  V  M  K  :  E  R  A  T  G  R  S  R  G  F  G  Y  V  T  F  A  T  V  E  D  A  K  :  N  A  L  S  K  E  H  F  L  G  N  R  M  L  E  V  K  V  A  T  P  K  :  E  E  M  R  A  P  A  K  K  V  T  R  I  F  V  A  R  I  P  P  S  V  S  E  A  T  F  R  G :   Y  F  E  K  Y  G  E  I  T  D  L  Y  M  P  K  :  D  P  S  T  K  G  H  R  G  I  G  F  I  T  F  A  N  A   : E  S  V  D  D  L  M  S  D  T  H  E  L  G  G  S  T  I  V  V  D  R  A  T  P  K  :  E  E  D  F  R  P  V  S  R  M  S  Q  S  G  G  G  Y  G  A  Y  N  A  Y  M  S  A  T  T  R  Y  G  A  L  G  A  P  T  L  Y  D  H  P  S  S  M  Y  G   : R  G  G  G  G  G  G  G  G  G  G  G  F  P  S  R  G  G  L  G  Q  K  I  F  V  G  R  L  P  Q  E  A  T  T  E  D  L  R  Q  Y  F  G  R  F  G  R  V  L  D  V  Y  V  P  K  :  D  P  R  R  P  G  H  R  G  F  G  F  V  T  F  A  D  D  G  V  A  D  R  V  S  R  R  P  H  E  I  C  G  H  Q  :  V  A  I  D  S  A  T  P  L  D  D  A  G  P  S  N  N  Y  M  M  D  P  P  P  P  A  P  E  A  Y  G  G  Y  G  G  P  M  R  T  Y  G  R  M  Y  G  G  L  D  Y  D  D  :  W  G  Y  G  L  G  G  G  R  P  S  R  S  D  M  R  Y  R  P  Y  *  L  A  W  L  D  R  R  R  S  R  S  D  M  R  F  R  P  *  *  L  C  V  A  G  G  Q  R  L  S  E  F  P  M  G  D  N  N  R  Y  V  I  F  I  S  V  Y  Y  *  V  D  I  I  I  H  V  L  L  I  L  K  *  L  K  K  Q  C  *  W  I  V  Q  F  T  S  Y  L  I  L  C  I  K  C  I  E  E  T  K  N  G  C  *  F  H  I  Q  E  *  </second_frame>
            <third_frame>   E  Q  W  L  G  V  *  R  S  *  A  A  R  G  R  A  S  G  A  E  *  E  S  E  L  G  F  *  *  S  E  S  R  R  S  V  E  R  V  N  L  I  *  Y  S  L  *  F  *  F  L  W  Y  P  K  I  L  E  K  L  V  S  L  F  *  N  M  M  M  M  M  I  F  V  C  E  K  E  V  C  V  C  Y  L  Q  E  E  S  S  C  V  S  D  S  F  I  E  R  G  V  V  R  S  R  E  R  V  E  C  I  S  Y  D  F  H  S  P  L  I  N  L  S  D  K  F  S  L  P  C  R  R  R  S  L  W :   F  *  A  S  H  G  T  W  I  Q  K  V  *  G  N  I  *  S  N  M  E  I  *  R  I  V  L  *  *  R :   N  V  L  L  V  V  L  V  D  S  A  M  S  H  L  L  Q  L  R  M  L  R :   M  H  C  L  R  S  T  F  L  E  T  E  C  *  K  *  K  W  R  H  R  R :   R  R  *  G  L  L  Q  R  K  *  P  G  F  S  L  L  G  F  L  R  L  C  L  K  L  L  S  E   : V  I  L  R  S  T  V  K  *  Q  I  C  T  C  Q  R :   I  H  L  P  R  D  I  V  E  L  G  L  L  L  L  Q  M  L  :  N  Q  L  M  I  *  *  V  T  P  M  N  W  E  V  P  Q  L  W  W  T  E  Q  H  P  R :   K  K  I  S  D  L  L  V  G  C  L  R  V  E  E  D  M  V  H  I  M  H  I  *  V  Q  L  L  D  M  V  R  L  V  L  L  P  Y  M  I  I  L  V  L  C  M  E  :  E  V  E  V  E  V  E  V  E  V  E  D  F  H  L  V  V  A  W  A  R  R  S  L  L  V  D  Y  L  K  R  Q  Q  L  K  I  F  A  S  I  L  V  D  L  A  V  F  *  M  C  M  S  Q  R :   I  Q  E  D  Q  G  I  E  G  L  V  L  L  H  L  L  M  M  V  L  Q  I  V  F  L  E  G  L  M  R  Y  V  D  I  R :   L  Q  L  I  L  L  L  L  L  M  M  L  V  Q  V  T  I  T  *  W  I  L  L  L  L  L  L  K  H  M  G  D  M  V  V  L  C  V  L  M  E  G  C  M  G  A  *  I  M  M  I :   G  V  T  A  W  V  V  G  D  L  Q  D  Q  I  *  D  T  G  P  T  S  W  P  G  W  I  G  G  G  Q  D  Q  I  *  D  S  G  P  S  S  F  V  L  Q  E  V  R  G  C  L  N  F  Q  W  V  T  T  I  D  M  S  Y  L  Y  Q  F  I  I  R  W  T  S  *  Y  M  C  Y  *  Y  L  S  N  *  K  S  S  A  D  G  L  C  N  S  L  H  T  *  S  F  V  L  N  V  L  K  K  Q  R  M  G  A  N  S  I  S  R  S  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31725" stop="31805"/>
                    <exon start="31888" stop="31977"/>
                    <exon start="33895" stop="33960"/>
                    <exon start="34139" stop="34204"/>
                    <exon start="34473" stop="34558"/>
                    <exon start="34653" stop="34698"/>
                    <exon start="34805" stop="34859"/>
                    <exon start="36086" stop="36162"/>
                    <exon start="36279" stop="36420"/>
                    <exon start="36631" stop="36791"/>
                    <exon start="36896" stop="37000"/>
                    <exon start="37554" stop="37706"/>
                    <exon start="38297" stop="38359"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYILRFPLSANQFVRQVFVTMSEKKLVVLGIPWDVDTEGLREYMIKYGDLEDCIVMKERATGRSRGFGYVTFATVEDAKNALSKEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRGYFEKYGEITDLYMPKDPSTKGHRGIGFITFANAESVDDLMSDTHELGGSTIVVDRATPKEEDFRPVSRMSQSGGGYGAYNAYMSATTRYGALGAPTLYDHPSSMYGRGGGGGGGGGGGFPSRGGLGQKIFVGRLPQEATTEDLRQYFGRFGRVLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAIDSATPLDDAGPSNNYMMDPPPPAPEAYGGYGGPMRTYGRMYGGLDYDDWGYGLGGGRPSRSDMRYRPY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31401" stop="31628"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAVAWGLKELSGARKSERSGVRERIRVLIIGIKKVSGARKSNLVLVVILISLVSEDLREIGEFVLKYDDDDDICV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="38697" PGL_stop="38383"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38697" e_stop="38383"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="38697" e_stop="38383" e_length="315"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38697" stop="38383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGTTTCTTCAATACATTTAATACAAAGGATCAAGTATGAAGTGAATTGCACAATCCATCAGCACTGCTTTTTCAATTACTTAAGTATTAGTAGCACATGTATTATGATGTCCACCTAATAATAAACTGATATAAATATGACATATCTATTGTTGTCACCCATTGGAAATTCAGACAGCCTCTGACCTCCTGCAACACAAAGCTACTAGGGCCTGAATCTCATATCTGATCTTGAC</gDNA_template>
            <first_frame> R  Y  K  T  *  F  A  I  L  L  H  Y  Q  L  C  F  Y  S  W  I  W  N  *  H  P  F  F  V  S  S  I  H  L  I  Q  R  I  K  Y  E  V  N  C  T  I  H  Q  H  C  F  F  N  Y  L  S  I  S  S  T  C  I  M  M  S  T  *  *  *  T  D  I  N  M  T  Y  L  L  L  S  P  I  G  N  S  D  S  L  *  P  P  A  T  Q  S  Y  *  G  L  N  L  I  S  D  L  D </first_frame>
            <second_frame>  G  I  K  H  N  L  L  Y  C  F  T  T  N  Y  V  S  T  P  G  Y  G  I  S  T  H  S  L  F  L  Q  Y  I  *  Y  K  G  S  S  M  K  *  I  A  Q  S  I  S  T  A  F  S  I  T  *  V  L  V  A  H  V  L  *  C  P  P  N  N  K  L  I  *  I  *  H  I  Y  C  C  H  P  L  E  I  Q  T  A  S  D  L  L  Q  H  K  A  T  R  A  *  I  S  Y  L  I  L   </second_frame>
            <third_frame>   V  *  N  I  I  C  Y  I  A  S  L  P  T  M  F  L  L  L  D  M  E  L  A  P  I  L  C  F  F  N  T  F  N  T  K  D  Q  V  *  S  E  L  H  N  P  S  A  L  L  F  Q  L  L  K  Y  *  *  H  M  Y  Y  D  V  H  L  I  I  N  *  Y  K  Y  D  I  S  I  V  V  T  H  W  K  F  R  Q  P  L  T  S  C  N  T  K  L  L  G  P  E  S  H  I  *  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0104A12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="42237" PGL_stop="39185"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42237" e_stop="42177"/>
            <exon e_start="41501" e_stop="40907"/>
            <exon e_start="40204" e_stop="39895"/>
            <exon e_start="39595" e_stop="39514"/>
            <exon e_start="39425" e_stop="39185"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.984"/>
          <exon-intron don_prob="0.991" acc_prob="0.995" e_score="0.997"/>
          <exon-intron don_prob="0.934" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.876" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="42237" e_stop="42177" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42176" i_stop="41502" i_length="675"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="41501" e_stop="40907" e_length="595"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.995">
            <gDNA_intron_boundary i_start="40906" i_stop="40205" i_length="702"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40204" e_stop="39895" e_length="310"/>
          </exon>
          <intron i_serial="3" don_prob="0.934" acc_prob="0.986">
            <gDNA_intron_boundary i_start="39894" i_stop="39596" i_length="299"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39595" e_stop="39514" e_length="82"/>
          </exon>
          <intron i_serial="4" don_prob="0.844" acc_prob="0.876">
            <gDNA_intron_boundary i_start="39513" i_stop="39426" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="39425" e_stop="39185" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42237" stop="42177"/>
              <exon start="41501" stop="40907"/>
              <exon start="40204" stop="39895"/>
              <exon start="39595" stop="39514"/>
              <exon start="39425" stop="39185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562963" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAG : GGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTCAAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAG : ATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAA : GTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAG : ATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</gDNA_template>
            <first_frame> *  A  P  Q  L  K  V  G  K  S  L  N  S  S  A  L  A  V  V  K   : G  L  L  F  Q  D  L  C  G  M  Q  F  A  I  I  E  N  H  E  A  E  F  Y  F  L  E  E  F  G  F  I  Y  K  P  S  N  T  R  I  W  R  *  *  C  *  R  I  S  E  G  M  E  F  *  T  S  P  V  A  D  *  Q  R  Q  E  A  Y  *  Y  Y  C  I  D  A  F  Q  *  W  K  D  S  A  F  K  M  G  *  C  *  K  V  D  Y  *  P  S  V  K  L  W  C  L  E  D  S  K  R  T  N  L  Q  G  P  Q  V  *  K  W  T  S  W  A  T  W  P  N  V  F  T  E  L  F  A  L  Y  A  S  P  *  K  W  R  Y  K  *  L  H  C  K  F  T  I  Y  N  W  C  T  G  A  *  W  G  I  H  S  L  W  C  W  *  I  C  S  E  *  Y  G  S  S  N  Q  C  S  R  S  V  R  F  V  Q  *  I  F  S  T  K  L  S  R :   *  C  H  K  G  A  R  F  Y  F  L  C  S  F  E  E  R  H  G  N  T  N  E  L  *  *  Q  Y  T  Y  I  S  P  G  K  V  I  F  N  P  S  W  S  G  A  E  Q  A  A  F  H  *  S  R  D  *  R  R  A  G  *  Q  R  R  P  N  F  R  A  I  S  E  K  P  G  E  E  T  Q  E  T  I  T  R  H  K  F  A  Y  L  N  V  G  C  C  R  W  N  K  E  Y  D  K  :  V  A  K  R  G  S  Q  D  R  C  L  G  E  L  A  E  G  Q  S  R  S  R  N  P  K  A  *   : D  E  T  R  K  E  E  V  S  I  H  G  *  D  S  E  Q  A  *  T  R  S  G  E  G  P  K  Y  E  T  C  N  F  G  E  S  A  *  K  G  F  P  Q  N  H  S  I  S  G  V  F  Q  D  Y  I  I  *  Q  L  L  C  L  P  Y  P  L  I  L  C  T  G  M  R  L  S  E  V  K  F  K   </first_frame>
            <second_frame>  E  H  H  N  S  K  L  V  K  A  *  T  L  L  H  *  Q  *  L  K  :  G  Y  C  S  K  I  Y  V  A  C  N  L  P  L  L  R  I  M  K  Q  N  S  T  S  L  R  N  S  G  L  Y  T  S  P  A  T  P  E  Y  G  D  N  N  V  R  G  F  Q  K  G  W  S  S  E  R  V  P  L  P  T  N  S  G  R  R  H  I  S  T  T  A  L  M  P  F  N  S  G  R  T  V  P  S  K  W  D  D  A  E  R  W  I  T  S  P  V  S  S  Y  G  V  W  R  T  P  N  A  Q  T  Y  R  G  P  K  S  K  S  G  P  L  G  P  P  G  L  M  Y  L  P  N  Y  S  P  S  M  P  V  L  E  S  G  G  I  S  N  F  I  A  N  S  P  F  T  T  G  V  L  V  P  D  G  V  S  I  H  Y  G  A  G  E  Y  A  Q  N  S  M  A  R  A  T  S  A  P  G  L  S  D  L  F  S  E  S  S  V  P  S  S  P   : D  D  V  T  K  E  P  D  S  I  S  F  A  V  L  R  R  D  M  A  T  Q  M  S  S  D  D  S  T  H  T  S  P  Q  E  R  S  S  S  I  P  P  G  V  E  Q  S  R  Q  H  S  T  K  V  E  I  R  D  V  Q  V  D  K  G  D  P  I  L  G  L  S  R  K  S  R  V  R  K  P  K  K  Q  L  P  D  I  S  S  P  I  S  T  W  D  V  V  D  G  T  K  S  M  T  K :   S  Q  R  E  E  A  R  I  A  A  W  E  N  L  Q  K  A  K  A  E  A  E  I  Q  K  L  E  :  M  K  L  E  K  R  R  S  A  S  M  D  K  I  L  N  K  L  R  H  A  Q  V  K  A  Q  N  M  R  R  A  T  S  E  S  Q  P  R  R  D  S  H  R  I  I  P  F  R  E  Y  F  K  I  T  S  F  S  S  C  F  V  C  R  I  P  *  F  C  V  Q  A  *  G  F  L  K  *  N  S  S  </second_frame>
            <third_frame>   S  T  T  T  Q  S  W  *  K  P  E  L  F  C  I  S  S  S  *  R :   V  I  V  P  R  F  M  W  H  A  I  C  H  Y  *  E  S  *  S  R  I  L  L  P  *  G  I  R  V  Y  I  Q  A  Q  Q  H  Q  N  M  E  I  I  M  L  E  D  F  R  R  D  G  V  L  N  E  S  R  C  R  L  T  A  A  G  G  I  L  V  L  L  H  *  C  L  S  I  V  E  G  Q  C  L  Q  N  G  M  M  L  K  G  G  L  L  A  Q  C  Q  V  M  V  F  G  G  L  Q  T  H  K  P  T  G  A  P  S  L  K  V  D  L  L  G  H  L  A  *  C  I  Y  R  T  I  R  P  L  C  Q  S  L  K  V  E  V  *  V  T  S  L  Q  I  H  H  L  Q  L  V  Y  W  C  L  M  G  Y  P  F  I  M  V  L  V  N  M  L  R  I  V  W  L  E  Q  P  V  L  P  V  C  Q  I  C  S  V  N  L  Q  Y  Q  A  L  Q  :  M  M  S  Q  R  S  Q  I  L  F  P  L  Q  F  *  G  E  T  W  Q  H  K  *  A  L  M  T  V  H  I  H  L  P  R  K  G  H  L  Q  S  L  L  E  W  S  R  A  G  S  I  P  L  K  S  R  L  E  T  C  R  L  T  K  E  T  Q  F  *  G  Y  L  G  K  A  G  *  G  N  P  R  N  N  Y  Q  T  *  V  R  L  S  Q  R  G  M  L  *  M  E  Q  R  V  *  Q   : S  R  K  E  R  K  P  G  S  L  L  G  R  T  C  R  R  P  K  Q  K  Q  K  S  K  S  L  R :   *  N  *  K  R  G  G  Q  H  P  W  I  R  F  *  T  S  L  D  T  L  R  *  R  P  K  I  *  D  V  Q  L  R  R  V  S  L  E  G  I  P  T  E  S  F  H  F  G  S  I  S  R  L  H  H  L  A  V  A  L  F  A  V  S  L  D  F  V  Y  R  H  E  A  F  *  S  K  I  Q  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42182" stop="42177"/>
                    <exon start="41501" stop="40907"/>
                    <exon start="40204" stop="39895"/>
                    <exon start="39595" stop="39514"/>
                    <exon start="39425" stop="39228"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKGYCSKIYVACNLPLLRIMKQNSTSLRNSGLYTSPATPEYGDNNVRGFQKGWSSERVPLPTNSGRRHISTTALMPFNSGRTVPSKWDDAERWITSPVSSYGVWRTPNAQTYRGPKSKSGPLGPPGLMYLPNYSPSMPVLESGGISNFIANSPFTTGVLVPDGVSIHYGAGEYAQNSMARATSAPGLSDLFSESSVPSSPDDVTKEPDSISFAVLRRDMATQMSSDDSTHTSPQERSSSIPPGVEQSRQHSTKVEIRDVQVDKGDPILGLSRKSRVRKPKKQLPDISSPISTWDVVDGTKSMTKSQREEARIAAWENLQKAKAEAEIQKLEMKLEKRRSASMDKILNKLRHAQVKAQNMRRATSESQPRRDSHRIIPFREYFKITSFSSCFVCRIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="49764" PGL_stop="55254"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49764" e_stop="50466"/>
            <exon e_start="50905" e_stop="51067"/>
            <exon e_start="51221" e_stop="51295"/>
            <exon e_start="51465" e_stop="51565"/>
            <exon e_start="51681" e_stop="51796"/>
            <exon e_start="52384" e_stop="52595"/>
            <exon e_start="52749" e_stop="52840"/>
            <exon e_start="53058" e_stop="53172"/>
            <exon e_start="53274" e_stop="53377"/>
            <exon e_start="53737" e_stop="53782"/>
            <exon e_start="53893" e_stop="53957"/>
            <exon e_start="54057" e_stop="54143"/>
            <exon e_start="54459" e_stop="54513"/>
            <exon e_start="54604" e_stop="54692"/>
            <exon e_start="54784" e_stop="54868"/>
            <exon e_start="54946" e_stop="55254"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.751" e_score="1.000"/>
          <exon-intron don_prob="0.731" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.085" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.683" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.547" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.925" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49764" e_stop="50466" e_length="703"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.980">
            <gDNA_intron_boundary i_start="50467" i_stop="50904" i_length="438"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50905" e_stop="51067" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51068" i_stop="51220" i_length="153"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51221" e_stop="51295" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.978">
            <gDNA_intron_boundary i_start="51296" i_stop="51464" i_length="169"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51465" e_stop="51565" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.954" acc_prob="0.751">
            <gDNA_intron_boundary i_start="51566" i_stop="51680" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51681" e_stop="51796" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.731" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51797" i_stop="52383" i_length="587"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="52384" e_stop="52595" e_length="212"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="52596" i_stop="52748" i_length="153"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="52749" e_stop="52840" e_length="92"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52841" i_stop="53057" i_length="217"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="53058" e_stop="53172" e_length="115"/>
          </exon>
          <intron i_serial="8" don_prob="0.895" acc_prob="0.996">
            <gDNA_intron_boundary i_start="53173" i_stop="53273" i_length="101"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="53274" e_stop="53377" e_length="104"/>
          </exon>
          <intron i_serial="9" don_prob="0.085" acc_prob="1.000">
            <gDNA_intron_boundary i_start="53378" i_stop="53736" i_length="359"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="53737" e_stop="53782" e_length="46"/>
          </exon>
          <intron i_serial="10" don_prob="0.972" acc_prob="0.983">
            <gDNA_intron_boundary i_start="53783" i_stop="53892" i_length="110"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="53893" e_stop="53957" e_length="65"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="53958" i_stop="54056" i_length="99"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="54057" e_stop="54143" e_length="87"/>
          </exon>
          <intron i_serial="12" don_prob="0.914" acc_prob="0.683">
            <gDNA_intron_boundary i_start="54144" i_stop="54458" i_length="315"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="54459" e_stop="54513" e_length="55"/>
          </exon>
          <intron i_serial="13" don_prob="0.894" acc_prob="0.998">
            <gDNA_intron_boundary i_start="54514" i_stop="54603" i_length="90"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="54604" e_stop="54692" e_length="89"/>
          </exon>
          <intron i_serial="14" don_prob="0.973" acc_prob="0.547">
            <gDNA_intron_boundary i_start="54693" i_stop="54783" i_length="91"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="54784" e_stop="54868" e_length="85"/>
          </exon>
          <intron i_serial="15" don_prob="0.997" acc_prob="0.925">
            <gDNA_intron_boundary i_start="54869" i_stop="54945" i_length="77"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="54946" e_stop="55254" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49764" stop="50466"/>
              <exon start="50905" stop="51067"/>
              <exon start="51221" stop="51295"/>
              <exon start="51465" stop="51565"/>
              <exon start="51681" stop="51796"/>
              <exon start="52384" stop="52595"/>
              <exon start="52749" stop="52840"/>
              <exon start="53058" stop="53172"/>
              <exon start="53274" stop="53377"/>
              <exon start="53737" stop="53782"/>
              <exon start="53893" stop="53957"/>
              <exon start="54057" stop="54143"/>
              <exon start="54459" stop="54513"/>
              <exon start="54604" stop="54692"/>
              <exon start="54784" stop="54868"/>
              <exon start="54946" stop="55254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569421" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTG : GTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAG : GTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAG : GTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGG : GTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACG : GTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAG : GATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAG : CTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCA : TTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGG : GGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAA : GCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGA : GTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGG : GTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAG : GTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGA : TAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAG : GCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</gDNA_template>
            <first_frame> I  Y  Y  L  F  G  Y  Q  S  S  L  P  H  H  H  P  H  F  N  P  Q  I  P  L  S  L  A  *  L  T  I  F  S  I  N  L  L  F  T  E  S  Y  I  H  W  K  K  N  S  N  L  L  F  L  N  W  G  S  I  K  R  C  I  Q  L  F  F  T  L  Q  C  I  L  P  L  Q  F  Y  Q  E  S  S  Y  L  Y  *  F  P  R  T  F  L  Q  S  Y  I  I  L  Y  L  V  G  A  W  K  M  G  I  S  T  R  L  K  E  *  K  *  K  Q  Q  L  L  K  L  Q  L  L  L  Q  R  R  L  T  L  G  L  T  V  I  *  R  F  H  R  R  S  *  K  Y  L  L  R  V  V  G  L  V  G  *  C  L  L  W  Q  Q  R  K  G  G  L  M  Y  W  C  L  R  G  I  *  V  L  S  E  E  R  D  N  I  E  V  Q  Y  R  Y  R  A  M  H  W  L  L  *  K  Q  L  I  W  M  L  L  K  T  L  *  M  L  A  A  S  L  V  K  G  L  M  A  W  L  M  V  F  L  A  T   : G  I  A  S  L  I  R  S  L  Q  Q  W  N  V  D  F  Q  *  Q  E  L  S  V  A  *  L  C  S  R  S  L  H  V  L  L  V  R  R  *  L  *  M  K  V  M  L  *  T  L  R  M  M  E  R  R :   L  L  W  F  L  R  M  D  N  D  L  Q  V  I  F  W  L  V  L  M  A  *  D  L  R :   Y  G  L  I  Y  S  D  P  V  K  L  L  T  L  A  T  L  V  I  L  E  L  Q  I  S  F  Q  L  I  L  I  Q  L   : G  T  A  S  F  W  A  T  N  S  T  L  F  L  Q  M  W  G  E  A  R  C  S  G  M  H  F  T  M  N  Q  L  V  V  R  M  P  Q  T  :  V  K  R  K  D  C  L  K  Y  L  G  D  G  V  T  M  L  *  T  Y  *  L  P  Q  M  K  M  Q  F  F  V  V  T  S  M  I  D  R  Q  P  L  V  G  E  E  V  V  L  H  C  L  G  T  P  S  M  P  C  S  L  I  W  V  K  G  D  A  W  P  *  R :   I  A  I  N  *  H  W  N  L  K  K  H  A  V  E  V  Q  S  L  E  A  L  W  I  S  S  H  L  *  G   : A  M  K  V  L  E  N  F  E  L  E  S  S  M  D  W  L  E  W  L  Q  S  W  H  L  L  T  R  L  I  L  A  S  D  L  V  H  Y  H :   F  *  R  S  I  E  Y  H  I  L  E  E  L  V  E  E  F  L  L  T  W  E  C  L  *  C  *  V  G  F  *  E  A  M   : G  T  S  L  K  A  E  *  N  I  A  G  Y  L  R  K :   Q  M  T  N  *  E  N  G  L  K  M  M  M  L  *  S  V  L  L  M  Q   : S  G  Y  F  Y  L  R  G  M  A  L  L  V  *  K  L  L  F  *  A  E  M  R  M  S  L  A  L  S   : G  P  S  H  I  Q  I  F  L  E  N  Q  *  F  Y  L  C  H  R :   Y  L  K  C  T  P  G  Y  H  A  K  T  E  H  F  L  *  L  I  Y  E  V  N  M  V  P  G  L  Q   : I  M  K  A  E  D  I  G  R  L  Q  T  S  L  H  V  F  I  H  Q  M  L  S  N  L  V  L  I  R :   Q  H  F  V  L  K  Q  *  N  F  H  *  K  L  L  K  G  R  K  S  A  K  Q  W  R  Q  R  K  A  *  P  D  I  N  R  K  L  Y  S  I  L  *  Q  T  S  G  V  E  Q  F  K  H  S  *  F  C  I  L  *  V  L  E  K  I  H  K  Q  D  T  M  K  E  N  T  E  I  L  L  K  K  S  G  E  C  H  G  H  C  L  L  F  Y  H  C  *  K  Y  I  T  S  L  C   </first_frame>
            <second_frame>  Y  I  T  C  L  D  I  N  L  P  C  P  T  T  I  L  T  L  T  H  K  S  H  F  L  W  P  N  *  Q  F  F  Q  *  I  F  F  S  L  N  H  T  Y  I  G  R  K  T  Q  I  F  F  S  *  T  G  V  Q  L  K  D  V  F  N  C  F  L  H  F  S  A  S  F  H  F  S  F  I  K  K  A  A  T  F  I  D  F  Q  G  L  F  C  R  V  I  S  F  F  T  L  *  E  L  G  K  W  A  Y  Q  Q  G  *  R  S  K  S  K  S  N  N  C  *  S  S  S  Y  S  Y  R  E  D  *  L  W  G  *  R  *  F  E  G  S  T  E  E  V  E  S  T  C  C  G  W  W  D  W  W  V  S  V  C  F  G  S  K  E  K  G  V  *  C  I  G  V  *  E  G  F  K  C  Y  Q  R  R  G  T  I  *  R  S  N  T  D  T  E  Q  C  I  G  C  F  R  S  N  *  F  G  C  C  *  R  H  Y  E  C  W  L  H  H  W  S  K  D  *  W  L  G  *  W  Y  F  W  Q  L  :  V  L  Q  V  *  Y  V  H  S  S  S  G  T  W  T  S  S  D  K  S  Y  Q  S  H  D  F  A  A  D  P  C  T  C  C  W  *  G  D  N  Y  E  *  K  *  C  C  R  L  *  G  *  W  R  E   : G  Y  C  G  S  *  E  W  T  T  I  Y  R  *  S  S  G  W  C  *  W  H  K  I  *   : G  T  D  *  F  I  R  T  Q  *  S  Y  L  L  W  L  H  L  L  Y  W  N  C  R  F  R  S  S  *  Y  *  Y  S  W  :  V  P  R  L  F  G  P  Q  T  V  L  C  F  F  R  C  G  G  R  Q  D  A  V  V  C  I  L  Q  *  T  S  W  W  C  G  C  P  K  R :   *  K  G  K  I  A  *  N  I  W  G  M  V  *  Q  C  Y  R  P  I  S  C  H  R  *  R  C  N  S  S  S  *  H  L  *  *  T  A  N  L  *  L  G  K  R  S  C  Y  I  A  W  G  L  R  P  C  H  A  A  *  F  G  S  R  G  M  H  G  H  R   : G  *  L  S  T  S  T  G  T  *  K  S  M  Q  S  K  C  R  V  W  K  P  C  G  Y  H  L  I  F  K  E  :  L  *  K  C  *  K  T  S  S  W  S  H  P  W  T  G  *  N  G  C  N  H  G  I  Y  L  Q  G  L  S  W  R  R  T  W  S  T  I   : I  F  D  A  V  *  N  T  T  S  W  K  S  W  W  K  S  F  Y  *  L  G  N  A  S  D  V  K  L  G  S  R  R  Q  W  :  G  Q  A  *  R  Q  N  K  T  L  Q  A  I  *  E   : S  K  *  P  I  E  K  M  V  *  R  *  *  C  F  R  A  C  Y  *  C  R  :  V  V  T  F  T  C  G  E  W  L  F  W  F  R  S  Y  C  F  K  Q  R  *  G  C  P  L  H  C  R  :  V  H  L  T  Y  K  Y  S  W  K  I  N  S  F  T  F  A  T   : G  I  *  N  A  R  P  D  I  M  Q  R  R  S  I  F  C  N  *  F  T  K  *  T  W  Y  L  G  Y  R  :  *  *  R  Q  K  I  S  D  V  S  K  L  P  Y  T  F  S  S  I  R  C  Y  R  I  W  F  *  *   : G  S  I  S  C  *  S  N  E  I  S  T  K  N  F  *  K  E  G  R  A  R  S  S  G  G  S  V  K  L  D  L  I  *  T  G  N  C  T  A  F  Y  S  K  H  Q  A  L  S  N  L  S  I  V  N  F  V  Y  C  R  F  *  K  R  S  I  N  K  T  P  *  K  K  I  Q  R  F  S  *  R  N  L  E  N  V  M  D  I  V  S  Y  S  T  I  A  K  N  I  L  L  L  Y  V  </second_frame>
            <third_frame>   I  L  L  V  W  I  S  I  F  L  A  P  P  P  S  S  L  *  P  T  N  P  T  F  F  G  L  I  N  N  F  F  N  K  S  S  F  H  *  I  I  H  T  L  E  E  K  L  K  S  S  F  L  E  L  G  F  N  *  K  M  Y  S  T  V  F  Y  T  S  V  H  P  S  T  S  V  L  S  R  K  Q  L  P  L  L  I  S  K  D  F  S  A  E  L  Y  H  S  L  P  C  R  S  L  E  N  G  H  I  N  K  V  K  G  V  K  V  K  A  T  I  A  E  A  P  V  T  P  T  E  K  T  D  S  G  A  N  G  D  L  K  V  P  Q  K  K  L  K  V  L  V  A  G  G  G  I  G  G  L  V  F  A  L  A  A  K  K  R  G  F  D  V  L  V  F  E  R  D  L  S  A  I  R  G  E  G  Q  Y  R  G  P  I  Q  I  Q  S  N  A  L  A  A  L  E  A  I  D  L  D  V  A  E  D  I  M  N  A  G  C  I  T  G  Q  R  I  N  G  L  V  D  G  I  S  G  N  W :   Y  C  K  F  D  T  F  T  P  A  V  E  R  G  L  P  V  T  R  V  I  S  R  M  T  L  Q  Q  I  L  A  R  A  V  G  E  E  I  I  M  N  E  S  N  V  V  D  F  E  D  D  G  E  K  :  V  T  V  V  L  E  N  G  Q  R  F  T  G  D  L  L  V  G  A  D  G  I  R  S  K  :  V  R  T  N  L  F  G  P  S  E  A  T  Y  S  G  Y  T  C  Y  T  G  I  A  D  F  V  P  A  D  I  D  T  V  G :   Y  R  V  F  L  G  H  K  Q  Y  F  V  S  S  D  V  G  G  G  K  M  Q  W  Y  A  F  Y  N  E  P  A  G  G  A  D  A  P  N   : G  K  K  E  R  L  L  K  I  F  G  G  W  C  D  N  V  I  D  L  L  V  A  T  D  E  D  A  I  L  R  R  D  I  Y  D  R  P  P  T  F  S  W  G  R  G  R  V  T  L  L  G  D  S  V  H  A  M  Q  P  N  L  G  Q  G  G  C  M  A  I  E  :  D  S  Y  Q  L  A  L  E  L  E  K  A  C  S  R  S  A  E  S  G  S  P  V  D  I  I  S  S  L  R  S :   Y  E  S  A  R  K  L  R  V  G  V  I  H  G  L  A  R  M  A  A  I  M  A  S  T  Y  K  A  Y  L  G  V  G  L  G  P  L  S  :  F  L  T  Q  Y  R  I  P  H  P  G  R  V  G  G  R  V  F  I  D  L  G  M  P  L  M  L  S  W  V  L  G  G  N  G :   D  K  L  E  G  R  I  K  H  C  R  L  S  E  K  :  A  N  D  Q  L  R  K  W  F  E  D  D  D  A  L  E  R  A  T  D  A  E :   W  L  L  L  P  A  G  N  G  S  S  G  L  E  A  I  V  L  S  R  D  E  D  V  P  C  T  V  G :   S  I  S  H  T  N  I  P  G  K  S  I  V  L  P  L  P  Q  :  V  S  E  M  H  A  R  I  S  C  K  D  G  A  F  F  V  T  D  L  R  S  E  H  G  T  W  V  T  D :   N  E  G  R  R  Y  R  T  S  P  N  F  P  T  R  F  H  P  S  D  V  I  E  F  G  S  D  K  :  A  A  F  R  V  K  A  M  K  F  P  L  K  T  S  E  R  K  E  E  R  E  A  V  E  A  A  *  S  L  T  *  Y  K  Q  E  I  V  Q  H  F  I  A  N  I  R  R  *  A  I  *  A  *  L  I  L  Y  T  V  G  F  R  K  D  P  *  T  R  H  H  E  R  K  Y  R  D  S  P  K  E  I  W  R  M  S  W  T  L  S  L  I  L  P  L  L  K  I  Y  Y  F  S  M  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0104A12.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49943" stop="50466"/>
                    <exon start="50905" stop="51067"/>
                    <exon start="51221" stop="51295"/>
                    <exon start="51465" stop="51565"/>
                    <exon start="51681" stop="51796"/>
                    <exon start="52384" stop="52595"/>
                    <exon start="52749" stop="52840"/>
                    <exon start="53058" stop="53172"/>
                    <exon start="53274" stop="53377"/>
                    <exon start="53737" stop="53782"/>
                    <exon start="53893" stop="53957"/>
                    <exon start="54057" stop="54143"/>
                    <exon start="54459" stop="54513"/>
                    <exon start="54604" stop="54692"/>
                    <exon start="54784" stop="54868"/>
                    <exon start="54946" stop="55029"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2010</number_coding_nucleotides>
                  <number_encoded_amino_acids>670</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLENGHINKVKGVKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFEDDGEKVTVVLENGQRFTGDLLVGADGIRSKVRTNLFGPSEATYSGYTCYTGIADFVPADIDTVGYRVFLGHKQYFVSSDVGGGKMQWYAFYNEPAGGADAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRRDIYDRPPTFSWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKACSRSAESGSPVDIISSLRSYESARKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTQYRIPHPGRVGGRVFIDLGMPLMLSWVLGGNGDKLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSDKAAFRVKAMKFPLKTSERKEEREAVEAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 17 chains have been computed
$ 
$ memory statistics:
$ 20824 bytes spliced alignments in total
$ 9 spliced alignments have been stored
$ 2313 bytes was the average size of a spliced alignment
$ 15000 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 1875 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 18 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:45:36
-->
