<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 22:44:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599370" ref_strand="+" ref_description="SGN-U599370 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345327|emb|CAO14625.1| (e_value=3e-74) unnamed; (*ATH) AT3G27330.1 (e_value=3e-56) | Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profiles: PF00097 zinc finger, C3HC4 type (RING finger), PF01697 Domain of unknown function | chr3:10118187-10121882 REVERSE | Aliases: K1G2.5; (*SWP) sp|Q8IYW5|RN168_HUMAN (e_value=2e-12) RING finger protein 168 OS=Homo sapiens GN=RNF168; ">
      <seq>ggagatgataacctctaagggttgctgagccccaagttccggtcggtggcagctatggctggttgggatgaagaggctcttctcatggccagtcttgttgtcgaagacacacctgatcgcctttctaagcaaaagaaacgttctgatttgctgcatttcaagactcccccaacaaattctagaaggaaaagaagggctcagaaaaggagccctgcgtccataactgcaactgttcttgatctggaagaccaagacactgcaaagcaagaaagcgagaaaaaggaggcagaattgaaattagacgagaaaggagatgaggcattggaagaacagggttgttctgttgctacatcttctactaagaagatagaaccaaaatccattgagaaagcagacacgaaagaagctgaagcatcagaggaacaggggtgttctgtttcttcttcttctgcagcatttccctccattgatctacttcgtgaagagctttcttgtgctatttgtttggagatctgttttgaaccgagtaccactccttgtggtcacagtttttgtaagaagtgtttgcgatctgctgctgataaatgtggaaagaaatgtcccaagtgcaggcagcttatcagcaatggtagatcatgcactgtaaatacagtactttggaatacaattcaactgttgtttcccaaagaagtagaaacaagaaaagcagctgctgatttgagtagtagagaagctaaacngtcaagtccagtaagagctgttgctactcattctaacagcagaacgacaagagtcctgctacctaacagtccagaatctggtcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="3756" stop="5948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4056" g_stop="4240" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4241" i_stop="4404" i_length="164">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4405" g_stop="4487" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="268" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4488" i_stop="4558" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4559" g_stop="4788" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="498" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4789" i_stop="4908" i_length="120">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4909" g_stop="4958" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="548" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4959" i_stop="5062" i_length="104">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5063" g_stop="5137" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="623" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5138" i_stop="5446" i_length="309">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5447" g_stop="5648" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="825" r_length="202" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U599370" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4056" e_stop="4240"/>
          <exon e_start="4405" e_stop="4487"/>
          <exon e_start="4559" e_stop="4788"/>
          <exon e_start="4909" e_stop="4958"/>
          <exon e_start="5063" e_stop="5137"/>
          <exon e_start="5447" e_stop="5648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAGGTACTTGCACCATTTTTTTTAGATTTTAAATAAGAAGCGAATTCAGGAATTAAAATCAAATCAATTAATCAGATAGATCATCTCTATTTTATCCGATTGGATTATCAGTCGTTCTTCTTTTTGTTTGGATTATTGGGAAATGCATAAATTTGTCATCTTTTCAGGAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAGGTAAATCATGATTTTCAAGAAGAGTTTGTGTTATGAATAATGGATTGTGTCCTGATGTTAATGTTCTGCAGAAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCTGTAAGTGTTGTAAATCCGTTCTTGAACCTTGGTGCCCCTACCTGTTTATCAATTGAGGGTGTCTTTTTTTCTATTTTCCTATTTTATTGTAGTATAAACATGATTTCTTTGAATTTGCAGATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAGGTACGATCTCAATGGCATCCTCATCAACTTATATTCATAAATCAATACATATAGGCATTTTCAGTAACTGACTCTGACAAATTTGGTAAAAATCATATCTGTAGTTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAGGTACTGTTAGGATGCTATTTCATTTCAGTTATATCCCTATTTCATTTGATATTTTTCATTTCCTGTGAGCCAAGTTGGCTGATCTTTGAAGCTAATTGGATTATAGATCAACCCAATGTTTTTCAAAAACTACATGAATAGTACTAAGTTGCAAAGTTCACATTATCAAAGTTTACATAGTTTGAGTCCTGAAAAAGAAATGTCACATAAACCAACTCAGATAGAGTATTAAATAAGCTTGAAAAGGATTTATCATGGTTCTATTGTTTCAAGTATGACGTATTCCTATTAAACTTGACTTCTTTGCAGCAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAAC-GTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</genome_strand>
        <mrna_strand>GGAGATGATAACCTCTAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG....................................................................................................................................................................GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG.......................................................................AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT........................................................................................................................ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG........................................................................................................TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG.....................................................................................................................................................................................................................................................................................................................CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACNGTC-AAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACCTAACAGTCCAGAATCTGGTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563043" ref_strand="+" ref_description="SGN-U563043 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157345328|emb|CAO14626.1| (e_value=6e-57) unnamed; (*ATH) AT5G40720.1 (e_value=1e-47) | Symbol: None | expressed protein, contains Pfam profile PF01697: Domain of unknown function | chr5:16315126-16317229 FORWARD | Aliases: MNF13.28, MNF13_28; ">
      <seq>ggttatgtgggggaggtttctagcaaaccataacaactgattagaagggtttttatttgaagatgaaaagagaataataattgaagttgaatgaaaaagaaggaagttgcaacaaagtgggtgacctcgtaacttgtttctttattggaacaagactgcttgaccacgtacaactctcaaatactagcaatatatgctcaaaaactgaatagcacaagtcgatgatgaaacagagactgctgaatttgaaccattaaaatcgtgggtatggctcaaattccaatcaaacatcgtaaaaaacatgtagcagttcgaagatctttcttctggtgtatcctctgctttgctgccttcactttctcttctctactatttcaagggtttcatcaatggcggccggcgacaaccacagccctaaccgctgttaagccaattatacaaaccgtcgaattcccggacgagacagttgttttcctaaaataccctccttcaactcccttattcacaaaacatgacctatactgcctctaccttgatcctaactcttctcaacctcctgaatcagttgaaaacgatgaattattggcccaacagctcgttcgatgtcccctggttaagccacgtggagtcctgacgtcacttttcgtcaagtctaccggttacaccctctccattggaccatcacgtcggtggaattcgttggcctatgaggccatgatcgatcgcgataacacgaccatagtgtttgttaaagggtttaatcttcgtggtggaagacaatcgcacgcttcaaaattcaagtgtgtttatggttgggatgttaagaatcccaaacttgtgttacaatcagatgttgtatccattgctcaagaagttgttcgatgtaataccccagtgagcatactgaataatccagagaggtttattggtactactaacatgcccattaaggtttctgttacaatggttggtaacgaacctttagactctataccgagtcctaaacgccgtctgcagcctgaatttccagctcaacaaaagcacaacatggtgtgtatgcacaatgttaagaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="8943" stop="7147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8644" g_stop="8266" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8265" i_stop="8142" i_length="124">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8141" g_stop="7447" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="1075" r_length="696" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U563043" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>1074</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8644" e_stop="8266"/>
          <exon e_start="8141" e_stop="7447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTATGTGGGGGAGGTTTCTAGCAAACCATAACAACTGATTAGAAGGGTTTTTATTTGAAGATGAAAAGAGAATAATAATTGAAGTTGAATGAAAAAGAAGGAAGTTGCAACAAAGTGGGTGACCTCGTAACTTGTTTCTTTATTGGAACAAGACTGCTTGACCACGTACAACTCTCAAATACTAGCAATATATGCTCAAAAACTGAATAGCACAAGTCGATGATGAAACAGAGACTGCTGAATTTGAACCATTAAAATCGTGGGTATGGCTCAAATTCCAATCAAACATCGTAAAAAACATGTAGCAGTTCGAAGATCTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAGGTAGTTAAATTCAATTCATTTCCAAACAAGCATAAATTTAGTTTGCGGTTAATATGGAGTATGATTGATTAAACCTTAATTACGATCTATTATAATTAAGTACCTTTCATTTTGCTAACTTCAGGGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCGTCTGCAGCCTGACTTTCCAGCTCAAAAACAGCACAACAT-GTGTGTATGCACAATGTTAAGAAAC</genome_strand>
        <mrna_strand>GGTTATGTGGGGGAGGTTTCTAGCAAACCATAACAACTGATTAGAAGGGTTTTTATTTGAAGATGAAAAGAGAATAATAATTGAAGTTGAATGAAAAAGAAGGAAGTTGCAACAAAGTGGGTGACCTCGTAACTTGTTTCTTTATTGGAACAAGACTGCTTGACCACGTACAACTCTCAAATACTAGCAATATATGCTCAAAAACTGAATAGCACAAGTCGATGATGAAACAGAGACTGCTGAATTTGAACCATTAAAATCGTGGGTATGGCTCAAATTCCAATCAAACATCGTAAAAAACATGTAGCAGTTCGAAGATCTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG............................................................................................................................GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTACTAACATGCCCATTAAGGTTTCTGTTACAATGGTTGGTAACGAACCTTTAGACTCTATACCGAGTCCTAAACGCCGTCTGCAGCCTGAATTTCCAGCTCAACAAAAGCACAACATGGTGTGTATGCACAATGTTAAGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586578" ref_strand="+" ref_description="SGN-U586578 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157345330|emb|CAO14628.1| (e_value=5e-52) unnamed; (*ATH) AT3G27340.1 (e_value=7e-43) | Symbol: None | expressed protein | chr3:10122471-10124181 FORWARD | Aliases: K1G2.9; ">
      <seq>gagggagattcgacttccggaaaatgaatgtgatcaggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19014" stop="22035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19313" g_stop="19425" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="221" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="286" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21736" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="761" r_length="475" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U586578" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19313" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</genome_strand>
        <mrna_strand>GAGGGAGATTCGACTTCCGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U565414" ref_strand="+" ref_description="SGN-U565414 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157345335|emb|CAO14633.1| (e_value=2e-33) unnamed; (*ATH) AT5G40700.2 (e_value=7e-28) | Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At3g27350.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82232.1) | chr5:16309118-16310721 REVERSE | Aliases: None; ">
      <seq>ggaagcacttggcctaaatttaaaaaaatgacacctttagcttcttcttactctatgagtggcctttcttaaacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaagaaccatcaaaccacattgagaatggtgaaacccaagaaacagtttctgagattagtgaaacatctcatactgagaagcctttgctgaagactaagagctccagctctaaacttgaggatgatgctgcatcagtgacaagcaagaaaaaatctgctttttcttcattcaaatcagcagtctactccaaaaaatcaaaatttccatttccgccgactaggcatagtattcctcttgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23015" stop="25069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23314" g_stop="23606" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="24239" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="830" r_length="537" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24240" i_stop="24626" i_length="387">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24627" g_stop="24769" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="831" r_stop="973" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U565414" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>973</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23314" e_stop="23606"/>
          <exon e_start="23703" e_stop="24239"/>
          <exon e_start="24627" e_stop="24769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAGGTAAATATGTGTTCTTTAAACTACTTTGGCCTAGATTTTTTGAACTTCTTAATCATACCAATAGTGTAGGAAACTCTGGCTTCATGAAAAGTATAGTTAGTTTTCATGAGATGATTTATATAGATGACCCCAATTAGCTTGTGATAAAAACCTAATTGATCTATTGAATCGGTATGACAACAACATATCCAATGCAATCCCATAAAGTTGGGTTTGGGGAGGTCAGAGTGTTAGCAGACCTTACCCCATCCTCAGAGGTAGAGGTGTTGTTTCCGATAGACTCCTCGGCTCAAGAATAACCAGTCCAAAGCAGTTCATTGTATTGATTGATTCATATACTAATTTTTAATGCTATATGGTACTGATTCATCTCATGTGATTCCGCAGAGCTCCAGCTCTAAACTTGAGGATGATGCTGCATCAGTGACAAGCAAGAAAAAATCTGCTTTTTCTTCATTCAAATCAGCAGTCTACTCCAAAAAATCAAAATTTCCATTTCCGCCGACTAGGCATAGTATTCCTCTTGATGT</genome_strand>
        <mrna_strand>GGAAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG...................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCAGCTCTAAACTTGAGGATGATGCTGCATCAGTGACAAGCAAGAAAAAATCTGCTTTTTCTTCATTCAAATCAGCAGTCTACTCCAAAAAATCAAAATTTCCATTTCCGCCGACTAGGCATAGTATTCCTCTTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571901" ref_strand="+" ref_description="SGN-U571901 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157345335|emb|CAO14633.1| (e_value=2e-37) unnamed; (*ATH) AT3G01710.1 (e_value=8e-17) | Symbol: None | expressed protein | chr3:260164-261745 REVERSE | Aliases: F4P13.26, F4P13_26; ">
      <seq>gcacaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccgctactagcaaggcatctaagcattgtgcaactccacttaagactcctatggcaacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaaagctatccagacgtaaaattattttaaccacaatcatttaccttttatattaacgttctcaagtcaatattgtcctcatacattcaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24591" stop="27432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24890" g_stop="24998" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25088" g_stop="25146" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="168" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="268" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="331" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26479" g_stop="26589" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="442" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26777" g_stop="27136" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="802" r_length="360" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U571901" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24890" e_stop="24998"/>
          <exon e_start="25088" e_stop="25146"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26589"/>
          <exon e_start="26777" e_stop="27136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATTGC</genome_strand>
        <mrna_strand>GCACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563230" ref_strand="+" ref_description="SGN-U563230 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157345337|emb|CAO14635.1| (e_value=3e-40) unnamed; (*ATH) AT5G40690.1 (e_value=2e-38) | Symbol: None | expressed protein | chr5:16307939-16308811 FORWARD | Aliases: MNF13.25, MNF13_25; ">
      <seq>ggttaaacacttttatcttctaaatcaatcattttttgaattttttattcgtagagaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaagaagatgaagattggtgtgttgtggaaggaatctaattcagttccttccaactgtatttgtgttaacctgttgaacaaaaattgttacatttctgtaattgtatttactgtcaaataattgggacatttcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28591" stop="27236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28292" g_stop="27536" g_length="757"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U563230" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28292" e_stop="27536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTAAACACTTTTATCTTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATG</genome_strand>
        <mrna_strand>GGTTAAACACTTTTATCTTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAAT-AATTGGGACATTTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584429" ref_strand="+" ref_description="SGN-U584429 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|118485298|gb|ABK94508.1| (e_value=1e-55) unknown; (*ATH) AT5G40670.1 (e_value=8e-37) | Symbol: None | PQ-loop repeat family protein / transmembrane family protein, similar to SP:O60931 Cystinosin {Homo sapiens}; contains Pfam profile PF04193: PQ loop repeat | chr5:16302939-16305013 FORWARD | Aliases: MNF13.23, MNF13_23; (*SWP) sp|P57758|CTNS_ARATH (e_value=7e-36) Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670; ">
      <seq>aaggattttacgattcgatttttgtcttcaatctagtttgttaattaatggcttcttggaattccgttccactggaagtgttgtataatgttttgggatggattgcgtttgtgtcatggtctattagcttttatcctcaggtcattttgaattttcgtcggaaaagttgtgctgttcaaaggcaatatcataatcgatatggcaaaaatgaggttcattgtgcgataaacacatgtgtacatgtatggtgttttgttttgtgctaattaattaattaattgtttaacttcagatgatacctgtagctgccaatgatgtggctttctctactcatgctcttcttttaacagcctttaccttgtttcagatctctatctatgatcgtggaaatcagaaggtatcgaaaattgctatagcaattgtttctgttgcttggttaagtgttgcagtttgtgtgtttgtggctatccctaagcattcctggctatggctagtgtcctgtttcaacggattgcaggttgctatgacagtaaccaagtacattccccaggctgttatgaacttccggagaaagagcaccgttggttttagtattggtaacattttgctggatttgtttggaggtttaacaaattacgggcagatggcagtgcaatctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="42354" stop="40549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42054" g_stop="41889" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41888" i_stop="41728" i_length="161">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.687" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41727" g_stop="41512" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="382" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41428" g_stop="41304" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="507" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41154" g_stop="41112" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="550" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41111" i_stop="40959" i_length="153">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40958" g_stop="40849" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="660" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U584429" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42054" e_stop="41889"/>
          <exon e_start="41727" e_stop="41512"/>
          <exon e_start="41428" e_stop="41304"/>
          <exon e_start="41154" e_stop="41112"/>
          <exon e_start="40958" e_stop="40849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGATTTTACGATTCGATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAGGTAATTTTCTGCTTTTATTTTTAATTTAATTTTGCAACTTCAGTTATTCTGATCAGTTATTTCTAATTTTTTAGTGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGATGTATGTAAGTGTACCTATCTCTTTTCAGTTCAAATTATTAATTTCCTTCTCATAGACATATGGAGTAGTACATCTCTTTTCAGCGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAAGTAAGCCACCTTCTTTTAAAATCCACAATTTAACTCACATTTTTTGTCTGATCAATCCCTAGTTATTGGGTTATAAATGAATATCACTGAACCCGAACTCTATCTACTATGACAATATAAAATCTCACACTTGTTTCTGTCAATTGCAGCGGATTGCAGGTTGCTATGACAGTAACCAAGTACATTCCCCAGGTAAATATGGCTTAGTCCTGTTTTGTTTGAGAAAAAAGTTATCAATTGCTTCCAGTTATTTTTATGATAGAGTCGTCTGCTTCTTCGACATATTACTTAGTTTACTTCCAATGCTTCCCTGGTTTAAGAATGTTGGCTGTCGAAAATCTATAGGCTGTTATGAACTTCCGGAGAAAGAGCACCGTTGGTTTTAGTATTGGTAACATTTTGCTGGATTTGTTTGGAGGTTTAACAAATTACGGGCAGATGGCAGTGCAATCTAT</genome_strand>
        <mrna_strand>AAGGATTTTACGATTCGATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG.................................................................................................................................................................TTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT...................................................................................CGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA.....................................................................................................................................................CGGATTGCAGGTTGCTATGACAGTAACCAAGTACATTCCCCAG.........................................................................................................................................................GCTGTTATGAACTTCCGGAGAAAGAGCACCGTTGGTTTTAGTATTGGTAACATTTTGCTGGATTTGTTTGGAGGTTTAACAAATTACGGGCAGATGGCAGTGCAATCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584430" ref_strand="+" ref_description="SGN-U584430 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|118485298|gb|ABK94508.1| (e_value=3e-56) unknown; (*ATH) AT5G40670.1 (e_value=2e-54) | Symbol: None | PQ-loop repeat family protein / transmembrane family protein, similar to SP:O60931 Cystinosin {Homo sapiens}; contains Pfam profile PF04193: PQ loop repeat | chr5:16302939-16305013 FORWARD | Aliases: MNF13.23, MNF13_23; (*SWP) sp|P57758|CTNS_ARATH (e_value=2e-53) Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670; ">
      <seq>gagagagagagagagagagagagagagagagagagagagagagctagacacagagatagagattttgcgatacagatattgagttcaatctagtttgttaattaatggcttcttggaattccgttccactggaagtgttgtataatgttttgggatggattgcgtttgtgtcatggtctattagcttttatcctcaggtcattttgaattttcgtcggaaaagtgtggtgggattgaattttgatttcgtggtgttgaatttgacaaagcactcgtcttatctcatctacaatgcttccatgttcttcagttgtgctgttcaaaggcaatatcataatcgatatggcaaaaatgagatgatacctgtagctgccaatgatgtggctttctctactcatgctcttcttttaacagcctttaccttgtttcagatctctatctatgatcgcggaaatcagaaggtatcgaaaattgctatagcaattgtttctgttgcttggataagtgttgcagtttgtgtgtttgtggctatccctaagcattcctggctatggctagtgtcctgtttcaacggattgcaggttgctatgacagcaaccaagtacattccccaggctgttatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="115379" stop="40811"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43024" g_stop="42981" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.523"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42980" i_stop="42069" i_length="912">
            <donor d_prob="0.316" d_score="0.52"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42068" g_stop="41889" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="223" r_length="180" r_score="0.939"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41814" g_stop="41682" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="356" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80">
            <donor d_prob="0.594" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41601" g_stop="41512" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="446" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41428" g_stop="41304" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="571" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41154" g_stop="41112" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="614" r_length="43" r_score="0.977"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="41111" i_stop="40959" i_length="153">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.918" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="40958" g_stop="40948" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="625" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U584430" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43024" e_stop="42981"/>
          <exon e_start="42068" e_stop="41889"/>
          <exon e_start="41814" e_stop="41682"/>
          <exon e_start="41601" e_stop="41512"/>
          <exon e_start="41428" e_stop="41304"/>
          <exon e_start="41154" e_stop="41112"/>
          <exon e_start="40958" e_stop="40948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATCCAAGAGGGAGTGTTATAGAACAATATAAACACCAAGAAGTTACTCACCCATTATCTCCACTATTTTCCTCATTATGAAGATGATCATAACCTCCATAACCTCCACCTTTATAACTATTATTCTTGTAACCTTTCACTTTCATAACCTCTCCATTATATTCATGTTAATGACCTCTCCATTATATTCATGTTAATGTCATGTTTATGACTAACCTTTTATATGCCTCTATGCTACACAATAAATAGAGGCATAAGGGTTCATATTGTATAACTTGAAGGTTTAGTAAAGACTTGAATAAAAAAAGCTCTCATCTTTTTGTCTACCTACTTCTATTATTTTCATCTTTTATATCTCTTCTTTTATATTCTTCTTTTCTTTATCTTTATATTGTTAGTTTGCTTCAATTTTACAAAAATACAAACTTATCACTAAAAAATAAAATAATTTGAATCTGAAAGATTGATACCAGAAAACGGAATGGAGAGAACATTTTTATTGTGGACACGTGGCTTACATATAAACAAAATAATAATGGAGGGATCCTTTCCTCTTTTCCGGTATAATTTGTTCAATTTCAAATCATGCAATCATATTTTCTTGCTTGAACGTAAGCACTTCGGTATAGATGATGGGTGAAAGGGACGTGAATATGGACGAAATATGGGGCACATTCATTACTTGCGTAAAATAAATTATTTTCTATGTCCATTTTTAGTTGTTATGATTTTATTTATCATCAAACAATAAGAATTTAATGCATATTTTTGTATAAACTTTTTTTAGAAAAAACATTAATATAATTTAATTTTTAAAGATTAGTTAAATTGACTTAATTTTGAAAACGGGTTGACTTAAATTTAAAAATTGGTCAAGTTTGACTGAGTATTGACTTCTGTATTAATGTTGGTTACATTGGGATTTGCATCGAAATAAATACCCCTATTCTTTTTCTAGACACAAAAATAGGGATTTTACGATTCGATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAGGTAATTTTCTGCTTTTATTTTTAATTTAATTTTGCAACTTCAGTTATTCTGATCAGTTATTTCTAATTTTTTAGTGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGATGTATGTAAGTGTACCTATCTCTTTTCAGTTCAAATTATTAATTTCCTTCTCATAGACATATGGAGTAGTACATCTCTTTTCAGCGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAAGTAAGCCACCTTCTTTTAAAATCCACAATTTAACTCACATTTTTTGTCTGATCAATCCCTAGTTATTGGGTTATAAATGAATATCACTGAACCCGAACTCTATCTACTATGACAATATAAAATCTCACACTTGTTTCTGTCAATTGCAGCGGATTGCAGGTTGCTATGACAGTAACCAAGTACATTCCCCAGGTAAATATGGCTTAGTCCTGTTTTGTTTGAGAAAAAAGTTATCAATTGCTTCCAGTTATTTTTATGATAGAGTCGTCTGCTTCTTCGACATATTACTTAGTTTACTTCCAATGCTTCCCTGGTTTAAGAATGTTGGCTGTCGAAAATCTATAGGCTGTTATGAA</genome_strand>
        <mrna_strand>GAGA-GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGACACAGAGATAGAGATTTTGCGATACAGATATTGAGTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG..........................................................................TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAG................................................................................ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT...................................................................................CGCGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGATAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA.....................................................................................................................................................CGGATTGCAGGTTGCTATGACAGCAACCAAGTACATTCCCCAG.........................................................................................................................................................GCTGTTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575499" ref_strand="+" ref_description="SGN-U575499 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157345340|emb|CAO14638.1| (e_value=6e-122) unnamed; (*ATH) AT5G40660.1 (e_value=4e-104) | Symbol: None | ATP12 protein-related, weak similarity to SP:P22135 ATP12 protein, mitochondrial precursor {Saccharomyces cerevisiae} | chr5:16300739-16302554 REVERSE | Aliases: MNF13.22, MNF13_22; (*SWP) sp|Q8N5M1|ATPF2_HUMAN (e_value=7e-21) ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens GN=ATPAF2; ">
      <seq>ggttaattcaacgtcttcagctgcatccatcgtcttctctccaagctatggcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattctgtcgtgctccaggggataatgatctgacaagcggagttcttgagcgtcaagtagagaaaattgatccccttcttaagtgggtagagtcagaattcggcttacaacccactgtacacaccagtttttttggtggcaagcaagatgatggtcttgttagtgccatcggaagcgttctcaagaaaacagatgattgtgaattggcaaccattgatgcaattgcttcagctgcacattctttagtcattgcacttggaattttccgtggtagattggggattgaggaagctattgagttaattaggcttgaggaagatttgcaggttgacaattggggtcttgttgaaggtggtcatgatgttgatattgcagatttaagagttcagattgcgtctgctgtggtgttccttggacttacaaggagtgtataaattttggtaatattttagtgagtcttaccttcagttgaggtcaccaacgaggtgaagtcaatatgttgggtaagttgtattaagcttattgctttcacaagaacgggagatgattgctgcaaataacctgctgatgaggaataatgaacatatttttctgaattcgaatgcacttctttgaacttggactacccatcaattttgatagtttattgatgtatgttgtaaatgaagagagcaaatcaagtatcttttacatctcttatatgcaatctaagtctcttatttaaaaacatctcttatttaaaaacataattaaaggagagttggttcccctcgttgaccaatatatttcttctatcgtttttggctcaacgctcttcacggcagcactgaacgcagagaggtggttgttttgtaacatcacaatacgcaacaggctatatcacagtcgttgttacaccctgttactgtgaagtattgagatggctccacagtcttagagtctatgagaaagggcagacgagtgcttgttccaacaattgtactaataataatcaccatagaaactagaaagctaactactactaacaacttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46153" stop="50631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46449" g_stop="46954" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="681" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49369" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="959" r_length="278" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49541" g_stop="50113" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="960" r_stop="1533" r_length="574" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50114" i_stop="50198" i_length="85">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50199" g_stop="50332" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1534" r_stop="1667" r_length="134" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U575499" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1666</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46449" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49369"/>
          <exon e_start="49541" e_stop="50113"/>
          <exon e_start="50199" e_stop="50332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTTATATGCAATCTAAGTCTCTTATTTAAAAACATCTCTTATTTAAAAACATAATTAAAGGAGAGTTGGTTCCCCTCGTTGACCAATATATTTCTTCTATCGTTTTTGGCTCAACGCTCTTCACGGCAGCACTGAACGCAGAGAGGTGGTTGTTTTGTAACATCACAATA-GCAACAGGCTATATCACAGTCGTTGTTACACCCTGTGATATAGATATAGAAGAATGAAGTTATTTCATCAGTCACCTAATGAGAAAAAAATTAATACTATTTGTTTCAAGTGGTAACCTGTTACTGTGAAGTATTGAGATGGCTCCACAGTCTTAGAGTCTATGAGAAAGGGCAGACGAGTGCTTGTTCCAACAATTGTACTAATAATAATCACCATAGAAACTAGAAAGCTAACTACTACTAACAACTTCAT</genome_strand>
        <mrna_strand>GGTTAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTACAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTTATATGCAATCTAAGTCTCTTATTTAAAAACATCTCTTATTTAAAAACATAATTAAAGGAGAGTTGGTTCCCCTCGTTGACCAATATATTTCTTCTATCGTTTTTGGCTCAACGCTCTTCACGGCAGCACTGAACGCAGAGAGGTGGTTGTTTTGTAACATCACAATACGCAACAGGCTATATCACAGTCGTTGTTACACCCT.....................................................................................GTTACTGTGAAGTATTGAGATGGCTCCACAGTCTTAGAGTCTATGAGAAAGGGCAGACGAGTGCTTGTTCCAACAATTGTACTAATAATAATCACCATAGAAACTAGAAAGCTAACTACTACTAACAACTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563726" ref_strand="+" ref_description="SGN-U563726 Tomato 200607#2 [70 ESTs aligned] (*GB) gi|157345341|emb|CAO14639.1| (e_value=9e-131) unnamed; (*ATH) AT5G40650.1 (e_value=1e-127)  Symbol: None | succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-2), nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-2) (gi:12049600) from Arabidopsis thaliana | chr5:16298632-16300755 FORWARD | ... ; (*SWP) sp|Q8LB02|DHSB2_ARATH (e_value=1e-126) Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2; ">
      <seq>aaataacacaacaccgaagatattatttatgtatttcagtaaaaacgatgctgaaaaaagcgaaaagcgattgatccaggacgcgagccaaccacgttacttagaaataatctaacgattacaaatccgacacgtcatcaatattcgacacagatcccaactcattcacggcaaagcttattagtcgacgaaacaataaatacaacctcaaatatttttcacatgtaccgaactaccccttccacatccacccattctcaaacacaaaaccacccaatgtcggtttcttttacatgcctatttccgtcatttaataccaatatttttctttaatataaaatccccctctattggctttctctagtagcaacctatccaatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatacagtatcaatttcaagtaaaaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54697" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54397" g_stop="53334" g_length="1064"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1064" r_length="1064" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50862" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1065" r_stop="1424" r_length="360" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U563726" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54397" e_stop="53334"/>
          <exon e_start="51221" e_stop="50862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGC</genome_strand>
        <mrna_strand>AAATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTAAAACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595938" ref_strand="+" ref_description="SGN-U595938 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345341|emb|CAO14639.1| (e_value=2e-99) unnamed; (*ATH) AT5G40650.1 (e_value=1e-97)  Symbol: None | succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-2), nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-2) (gi:12049600) from Arabidopsis thaliana | chr5:16298632-16300755 FORWARD | ... ; (*SWP) sp|Q8LB02|DHSB2_ARATH (e_value=1e-96) Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2; ">
      <seq>gatttctcgagtagcagcctatccaagcgctccgattttggtgttcattcattcttctatggcgacgagtttaatccgacgagcgatttctagggttcgatcatcagcaccggcggagaggctactcgtggccagatctcacgcttcggactcccaagcacagaacggagaatctcaggctaagtctcatatcatttcgaatgtaccgatggactccagacaacccatggaaacctgagctcaaagaatacaatatcgatctgaaggagatgcggacctatggtgttagatgcgctgatctcaatcaagaatgaaatgtgaccctacacttgccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgctttgccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagggtagtgtgttccaatcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54344" stop="50720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54044" g_stop="53334" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51020" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="916" r_length="202" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U595938" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>913</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54044" e_stop="53334"/>
          <exon e_start="51221" e_stop="51020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAA-TCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGA-ATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAAT-TGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTC</genome_strand>
        <mrna_strand>GATTTCTCGAGTAGCAGCCTATCCAAGCGCTCCGATTTTGGTGTTCATTCATTCTTCTATGGCGACGAGTTTAATCCGACGAGCGATTTCTAGGGTTCGATCATCAGCACCGGCGGAGAGGCTACTCGTGGCCAGATCTCACGCTTCGGACTCCCAAGCACAGAACGGAGAATCTCAGGCTAAGTCTCATATCATTTCGAATGTACCGATGGACTCCAGACAACCCATGGAAACCTGAGCTCAAAGAATACAATATCGATCTGAAGGAGATGCGGACCTATGGTGTTAGATGCGCTGATCTCAATCAAGAATGAAATGTGACCCTACACTTGCCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTTGCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGGGTAGTGTGTTCCAATCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U576793" ref_strand="+" ref_description="SGN-U576793 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|116831559|gb|ABK28732.1| (e_value=8e-17) unknown; (*ATH) AT5G40645.1 (e_value=8e-19) | Symbol: None | nitrate-responsive NOI protein, putative, similar to nitrate-induced NOI protein (Zea mays) GI:2642213 | chr5:16297511-16298200 REVERSE | Aliases: None; ">
      <seq>ttctctcttcttcttcctttcatcaattaattacaccaaaaatatcatattcatgaattcccaagagaaaggtcggccattgccgaaattcggggagtgggatgtaaataatccagcctctgcagatggattcactgtcatatttgctaaggctagagatgacaagaaggctaatagcagtgcagcaccaacacaaacgcccagaaatgactatgcatatggacaaccgaacccttatcagcaagaaaccaggaaaagaaggttttgctgtttctgaaagcaggatgtttcggtggctgtgaattatgagactttaaggccatcgggaattgcagttcaagtctgccaagtgggagaatgagtgctgcaccttctgtttgtattttactctattgattatttgttgcatataaggttttcttcaactctctctactctctactccccaatatatgtatgtatgtattcaggggaatcgtcgaccaacacacgctaatgtattctacttgaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="57392" stop="55229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57092" g_stop="57032" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56521" g_stop="56330" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="253" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55789" g_stop="55528" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="515" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U576793" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57092" e_stop="57032"/>
          <exon e_start="56521" e_stop="56330"/>
          <exon e_start="55789" e_stop="55528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTTCTTCTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCCGTAAGTTTCTCTCTCTTCTAGTTTTTTTTTTTTAATTCTGAATTCGTTCTGCCTCTAAACGTAAAGGTTCTTGAATTTGTGCTATTCTAAAATATAATGAGATTCATGAAATCTGTAAAAATCCAAAACCCCGACGCCTCACATTTCTCTTTTAATGAATTAGACGTTACGAAAAAATGATTGTTTTGTTCCTATATGGCATATGTCTTATTGGCTACGACCAACCTTTTCAATCGGTTTGCTGCATTTGATTTCACCAACAAGTTTTTGTGTATTTTTTTTTATAGCACGATGGAGCATGTGTTAGTTGATAATCCCTTTTACATTTCGGTTTAACAAAGGTATTTTGTTGATTGTTCATACAAAACATAAAGATTGGAAGAAAATCACACGTTAGAGTTGTTTGACTTTATGGCAAGTTTAAGAAAAAGAAGAGAAAACCTGTTATGCCATTTGTACAAGTTTAGCATGTTATTGAAAACTCTGCTTTTTGACATTGGCAATTTCTAGCAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGGGTATATCCATCCCCTCAACTACTAAATCTTACTAATACTTCTTCTTTTTGTGCTACAAGCATTCAAGAAATTACATTTTGGAGTTAAAGTCTAGTCGTTGTTATTTTCTTACTATCATATGTTGTTGTTACTGTCATAAATGATGTGTTTTTGCTTTCCTTGTGCCGAACCTGCCAAGGGAGGGGTAAGGTCACCACTTGTGGGACTATACTGCGTAATTTGTTGTTGTTTAGAGTTTGGTTCTAGGTACTAGTCTGTCTTTTGAGATTCAGAGAAGTATTATTCTAGATTAGAGTTGTCTTGTGGTGACATGATATGTGTTTGAATAAGGAAACTAGAACCAGATCTAACTGAAACTGATTATATTGTCCACAAAAGAAAAATTAACAAGTAGCGGTTTTGTTGGAGAGTTCATGTTGAATGTTTGTTAGGAGACTTTGTAATCTTGTTAGTAGGAAATGTAAAGAATTTATTCATGTTCATAGAACAGTACTCAAGACCCCAACTAGATTCTAATATGTAGTATTTGTATATATGCAGAAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAAGC</genome_strand>
        <mrna_strand>TTCTCTCTTCTTCTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598787" ref_strand="+" ref_description="SGN-U598787 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|22775562|dbj|BAC11949.1| (e_value=4e-46) phosphoprotein NtEPb1 [Nicotiana tabacum]; (*ATH) AT5G14345.1 (e_value=1e-31) |; (*SWP) sp|Q9SK27|ENL1_ARATH (e_value=3e-18) Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060; ">
      <seq>actggttggacagttcctccccaaaatgacacaattttttacaacaactgggcttccgctatgaggttcaaaattggcgacactatccgtttcaagtacaagaaggattcagtgatggaggtgacggataaagattacaagaaatgcaactcaacacagcctcatttcttttccaacagtgggaacaccatgttcacgttggagcattctggctattattatttcataagtggagcagcaggacactgtgagcgaggacaacgaatgatactaagggttatggtccaggatctcatacctactgcttctcatgctccattctcattcccaatctttcaacaacttcaacttctcttctttcttttcctttcacttgttttattttaacttcttactgcgacgttgtttttcttctgcattggcatactttgtttatttttaatcttctatgcgtttcaatttatttatcananaanaaaana</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="61269" stop="60121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60969" g_stop="60882" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60881" i_stop="60805" i_length="77">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60804" g_stop="60422" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="471" r_length="383" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U598787" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60969" e_stop="60882"/>
          <exon e_start="60804" e_stop="60422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGGTTGGACAGTTCCTCCCCAAAATGACACAATTTTTTACAACAACTGGGCTTCCGCTATGAGGTTCAAAATTGGCGACACTATCCGTAAGCATAAGCATATATATATGTATTACTAGCTAGTTTTTGTTAGGAAGTCATGTTTAATTTGGTGATGGATTTAGGTTTCAAGTACAAGAAGGATTCAGTGATGGAGGTGACGGATAAAGATTACAAGAAATGCAACTCAACACAGCCTCATTTCTTTTCCAACAGTGGGAACACCATGTTCACGTTGGAGCATTCTGGCTATTATTATTTCATAAGTGGAGCAGCAGGACACTGTGAGCGAGGACAACGAATGATACTAAGGGTTATGGTCCAGGATCTCATACCTACTGCTTCTCATGCTCCATTCTCATTCCCAATCTTTCAACAACTTCAACTTCTCTTCTTTCTTTTCCTTTCACTTGTTTTATTTTAACTTCTTACTGCGACGTTGTTTTTCTTCTGCATTGGCATACTTTGTTTATTTTTAATCTTCTATGCGTTTCAATTTATTTATCAC</genome_strand>
        <mrna_strand>ACTGGTTGGACAGTTCCTCCCCAAAATGACACAATTTTTTACAACAACTGGGCTTCCGCTATGAGGTTCAAAATTGGCGACACTATCC.............................................................................GTTTCAAGTACAAGAAGGATTCAGTGATGGAGGTGACGGATAAAGATTACAAGAAATGCAACTCAACACAGCCTCATTTCTTTTCCAACAGTGGGAACACCATGTTCACGTTGGAGCATTCTGGCTATTATTATTTCATAAGTGGAGCAGCAGGACACTGTGAGCGAGGACAACGAATGATACTAAGGGTTATGGTCCAGGATCTCATACCTACTGCTTCTCATGCTCCATTCTCATTCCCAATCTTTCAACAACTTCAACTTCTCTTCTTTCTTTTCCTTTCACTTGTTTTATTTTAACTTCTTACTGCGACGTTGTTTTTCTTCTGCATTGGCATACTTTGTTTATTTTTAATCTTCTATGCGTTTCAATTTATTTATCAN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U579116" ref_strand="+" ref_description="SGN-U579116 Tomato 200607#2 [46 ESTs aligned] (*GB) gi|62956018|gb|AAY23354.1| (e_value=5e-155) 3-ketoacyl-CoA; (*ATH) AT1G67730.1 (e_value=3e-123) | Symbol: None | b-keto acyl reductase, putative (GLOSSY8), similar to b-keto acyl reductase GI:2586127 from (Hordeum vulgare) | chr1:25395123-25397273 FORWARD | Aliases: F12A21.14, F12A21_14; (*SWP) sp|Q6P7R8|DHB12_RAT (e_value=7e-55) Estradiol 17-beta-dehydrogenase 12 OS=Rattus norvegicus GN=Hsd17b12; ">
      <seq>ctcccagctgtgctgtgcccatacaagtgaattaatagactgctccaaacccatcgcgtgtaacactccaagattcaatctttagatctatacgcttctttatttatatataaaattatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattcgaaggagagggcagctgaaggattccaggaagaaagaatagaaagcatctgctttacctcattccatatcttaaaagtttgattagtagacaattaatttccgtctctatttccaattgggtaatgctagttactgtaatgcaactagaagcttgattctgttcttactcattaaacaaggcctagtgttatttttgcaattttagttgtaggctgatcgaatcaagagcgttctaaaagaaattccaactcttaagatactgtttgtatttattctttgagtttgatgttgcagaatgaattttctgtaaggagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62068" stop="65248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62368" g_stop="63152" g_length="785"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="785" r_length="785" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="786" r_stop="855" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64948" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="1387" r_length="532" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U579116" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1387</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62368" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAGAATGAATTTTCTGTATGGTGTTT</genome_strand>
        <mrna_strand>CTCCCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAGAATGAATTTTCTGTAAGGAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585135" ref_strand="+" ref_description="SGN-U585135 Tomato 200607#2 [33 ESTs aligned] (*GB) gi|157345345|emb|CAO14643.1| (e_value=2e-172) unnamed; (*ATH) AT5G40640.1 (e_value=1e-155) | Symbol: None | expressed protein | chr5:16294270-16297652 FORWARD | Aliases: MNF13.19, MNF13_19; (*SWP) sp|Q8GUM4|Y3739_ARATH (e_value=2e-152) Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390; ">
      <seq>acgtactgactacggaaagactcagttcttttcagcaaaatccgagattttttggttgcattttccaagattaattgatttgtgaaaaggggttgtaccttgttagtgattgtgtaaagatcgagtggttcttgatttagcgaagcataagaatggaacctccaaggggggtttttgattcggtgtggaacttcattcgtttcttaccttacttcattagcctgcttattttgggtgtcttgaaaggtgtcattgtgttccctatcgtccttattatactcactgtcggaaactgttcccttattttgggtctttggccagtgcacctgttctatacattttactgtatatggagcacaaagcaactaggtccagctttaaaatttttagtaggcatatgtgcccttgttattttatatttatggcccttcattggaattgcaactagcattattggcggggctgcttatggcttcctttcaccagtgtttgccactttccaagcagtggatggaagggcgactaatgccttctatcacagtatatatgatgggacctgggacacagtgaaaggaagcttgaccattgttagggatttgaaggatgtcttataccattcctatttctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcagggtgctttatattcctttggcgctattagctgtggaactaggactcgtggttgatatgccaatgatcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaatatttcctctgaacttagataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69617" stop="64840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69317" g_stop="69072" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68804" g_stop="68696" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="355" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79">
            <donor d_prob="0.841" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68616" g_stop="68424" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="548" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68329" g_stop="68193" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="685" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67047" g_stop="66759" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="974" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="975" r_stop="1081" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1082" r_stop="1217" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1218" r_stop="1416" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1417" r_stop="1660" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="65591" g_stop="65140" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1661" r_stop="2112" r_length="452" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U585135" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2112</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69317" e_stop="69072"/>
          <exon e_start="68804" e_stop="68696"/>
          <exon e_start="68616" e_stop="68424"/>
          <exon e_start="68329" e_stop="68193"/>
          <exon e_start="67047" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACTCTTTGCAGGTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAGGTGCATTCTTAAGCTCTCATGGTTAACCTTATGTGTCTAAAGATGCTCTTTAATGACTTCCACCTTTTATGAATTGCAGCACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAA</genome_strand>
        <mrna_strand>ACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAG...........................................................................................................................................................................................................................................................................GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG...............................................................................CACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587561" ref_strand="+" ref_description="SGN-U587561 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgatgaactgatgcacatattcataaactttgtccaagaaatataaaattcattactagcaggaagaactaataaaagctttcaaaatagtcttcaatctaaacctgttgactgaaagtgcacagacagattaagcaaagcatgctagtggatagaattcatgcggatcttatcattgaatttcaacatctctatcagtatctaccagttgagcctttttgatgactcttgccatttttattcttgaaagaattttcgctaaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="64864" stop="65729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65163" g_stop="65429" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U587561" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>267</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65163" e_stop="65429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATGAACTGATGCACATATTCATAAACTTTGTCCAAGAAATATAAAATTCATTACTAGCAGGAAGAACTAATAAAAGCTTTCAAAATAGTCTTCAATCTAAACCTGTTGACTGAAAGTGCACAGACAGATTAAGCAAAGCATGCTAGTGGATAGAATTCATGCGGATCTTATCATTGAATTTCAACATCTCTATCAGTATCTACCAGTTGAGCC-TCTTGATCACTCTTGCCATTTCTATTCTTGAAAGATTTCTCGCTAAACATA</genome_strand>
        <mrna_strand>GTGATGAACTGATGCACATATTCATAAACTTTGTCCAAGAAATATAAAATTCATTACTAGCAGGAAGAACTAATAAAAGCTTTCAAAATAGTCTTCAATCTAAACCTGTTGACTGAAAGTGCACAGACAGATTAAGCAAAGCATGCTAGTGGATAGAATTCATGCGGATCTTATCATTGAATTTCAACATCTCTATCAGTATCTACCAGTTGAGCCTTTTTGATGACTCTTGCCATTTTTATTCTTGAAAGAATTTTCGCTAAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587562" ref_strand="+" ref_description="SGN-U587562 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|116310468|emb|CAH67471.1| (e_value=2e-12) H0805A05.1; ">
      <seq>gcggttgggacctgggacacagtgaaaggaagcttgaccattgttagggatttgaaggatgtcttataccattcctatttctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcaggttttgttgaatcgtctatctcaaagttctttttcccgtctttgtccaatttgaaatttgatagttttctctatagttccataccttatatctttcattatcagagagtctcagataactagttagtatgtcaattcagttaatgaattgtatcttttattggaaatatacaacaaagcagcttgccgttgtttgctaattacatgctctacttttacatctctgtcagttgaaacctacacctcaaagctttcttgacaactcctaccatatgtgatgacagggtagagatggtggtgtaattttagctacagaagcttgcacgacagatgagagaatatctcgtatgatggttaacctaaaagaaaaacatgaacggagaatctgaatgtcccctattttcctagaatatttcatctattttaacttccgtttcagaagaattttcaaaactccagctttccctgtaggtttgatctatttttgtattagttcattccaaaaatatatatcccggtgactaaatggcaaactatacaaaaagaaatataagaagtatatacttactgttcatagcatctttacatcttccacatatattttgcttataacactttacactgtcaagatttttctgaatatcagtgaagcgtcaagttagttcatgcaaaatcttaaaacacttatttagtttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68630" stop="67196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68332" g_stop="67496" g_length="837"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="837" r_length="837" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U587562" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587562" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68332" e_stop="67496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</genome_strand>
        <mrna_strand>GCGGTTGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587563" ref_strand="+" ref_description="SGN-U587563 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gttttgttctaatatcctcaaaacccacatccacatcttcatctatgtttccatgttacgtactgactacggaaagactcagttcttttcagcaaaatccgagattttttggttgcattttccaagattaattgatttgtgaaaaggggttgtaccttgttagtgattgtgtaaagatcgagtggttcttgatttagcgaagcataagaatggaacctccaaggggggtttttgattcggtgtggaacttcattcgtttcttaccttacttcattagcctgcttattttgggtgtcttgaaaggttcttttcttcttcttcaattacactcatgtcactgttgtctcttctttcctttttttcaattagcatacttttttcatttttcttgtttttcatctctgttgctttaaaatgattttacttgagctgagaaacaacctctctatctcccaaggtaggggtaaggtctatacttaccagatcccactcaccaggtaagttgttgttgttttactgttccaaagctagtcatagaaatgactggtttgtgctacttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69673" stop="68513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69374" g_stop="68813" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U587563" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69374" e_stop="68813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATTTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</genome_strand>
        <mrna_strand>GTTTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATGTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575916" ref_strand="+" ref_description="SGN-U575916 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157345346|emb|CAO14644.1| (e_value=1e-86) unnamed; (*ATH) AT3G46610.1 (e_value=2e-75) | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat | chr3:17170990-17173460 REVERSE | Aliases: F12A12.130; (*SWP) sp|Q9SXD1|PPR91_ARATH (e_value=1e-15) Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670; ">
      <seq>gaatggtagagaaaggtgaaaaacctacagttatatcctatggagcgttgctcagtgctctagaaaaaggcaagctctatgatgaagctcttcaggtttggaaacatatgatcaaagtggggatcgagccaaatttgtatgcctatactattatggcatcaatttacactgctcaagggaaatttaacatagttgattctatcatcaaggagatggttactactggagttgagcctacagttgttacattcaacgctattattagtggatgtgctcggaatggtatggaaagtgttgcatacgagtggtttcagcgtatgaaaactcaaaacataaccccgaatgaggtaagctatgaagtgctaattgaggctcttgccaatgatggcaagccgaggctagcatatgagttgtatgtgagagctctaactgaaggcctgagtctttctacaaaggcttatgatgcagtcatctcatctacacaggcatatggtgcaagtattgatctaagcattcttggcccccgcccaccagaaaaaaagaaacgagtgcaaatcaggaaaagtttgtctgaattctgtcatatagccgatgttcccagaagaagcaggccctttgacagggaagaaatttttactgctcagacaaaaggaacatgataagcacaactttatattgctagtgtgtgtaagtatacaactcattgtttatatgttgtgctgttttcaacaaaaagtgtatgcttcctcttgcgtaaagctacattagttgattgactttagatgcaaaatcaggcttatcccaattaccttttcacctctatcctggattcaagcattcatttttttttttgcactttcaatatataaaccgccccatcatattattatcaatttatacaatatgcctccctttaatttgcgaatcaaatacagtcatgcctccgaaagtgttcgttcaaaactcaaccttgacaaaaaacactagttgattttttccctttgtcctagctttagtggaaatagtttattcatacttattgctggggtgaaatggcatgtaccaactttgctaattttgttccctttgtactgaaaaagttgaaacccttccttttgtactgaaaaagttgaaaccctttaaagttgtttccataaaatttcaggctgacaggtaatttgaggaagcatattaatattttttttgtacaactaccaaaaagcttgctagaatcaattccttgacatatgtttgatgtaagtatttattgaactaaatttttttgtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="73290" stop="71404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72990" g_stop="71703" g_length="1288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1288" r_length="1288" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U575916" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>1288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72990" e_stop="71703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATCTTTTCTCTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTCTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGCGTGAGATGGCATGTACCAACTCTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTCTTCTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTCA</genome_strand>
        <mrna_strand>GAATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTTTATATGTTGTGCTGTTTTCAACAAAAAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATTTTTTTTTTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAAAGTGTTCGTTCAAAACTCAACCTTGACAAAAAACACTAGTTGATTTTTTCCCTTTGTCCTAGCTTTAGTGGAAATAGTTTATTCATACTTATTGCTGGGGTGAAATGGCATGTACCAACTTTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAAAGTTGTTTCCATAAAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTTTTTTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566309" ref_strand="+" ref_description="SGN-U566309 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345346|emb|CAO14644.1| (e_value=5e-68) unnamed; (*ATH) AT3G46610.1 (e_value=2e-59) | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat | chr3:17170990-17173460 REVERSE | Aliases: F12A12.130; (*SWP) sp|Q9SI78|PPR93_ARATH (e_value=2e-13) Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720; ">
      <seq>gtttactcatctatgattagaggttttggtaaagataagaaactgaactctgctatggcacttgtcgagtggttaaggaggaggaggggcaaggacaatattggctctattagcttaaatgtgttcatttataacagtcttttaggtgccataaaagaggcggggaagtatgattttgttgataaagtcatggatgatatggtttcagaaggagtgcagcctaatgttgtgacgtacaatactttaatgagaacttatatagaacaaggtcgggaacttgaagctctcaaacttttcagggagatgccaaagaagggactcactcctagtcctgcatcctattccactgccttgtttgcttatcggagacttgaagatggatttggtgctataactttctttgtcgagacacgagagagatatcaaaatggtgaaataggaaatattgaggaagaaaactgggaggatgaatttgccaagcttgagaatttcatagttcgaatttgctaccaggtgatgcggcagtggctggtaaagggtgaaaatgcaaacaccaatgttctgaaactactaacggatatggatagggctaggctccaactaagtcgtgcagaatatgaacgtctggtgtgggcctgtactcgtgaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="74308" stop="73059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74008" g_stop="73359" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="650" r_length="650" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U566309" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74008" e_stop="73359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGAAGA</genome_strand>
        <mrna_strand>GTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585320" ref_strand="+" ref_description="SGN-U585320 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345347|emb|CAO14645.1| (e_value=5e-43) unnamed; (*ATH) AT5G14360.1 (e_value=2e-36) | Symbol: None | ubiquitin family protein, contains INTERPRO:IPR000626 ubiquitin domain | chr5:4631041-4631644 FORWARD | Aliases: F18O22.150, F18O22_150; ">
      <seq>ttcttaacaacttttatatttttataagtaaacgaaaatgatcaagttgagatgcaaaaagttcttcagaagcaactcaaaggttgcaagtagtaatgccgtcgtagcagataccaaattaggtggtgaaataaaatgggaattacgtccaggaggtatgttggtacaaaagagagaatgtgcagagaatgatggagattcaattatcacacttagagtctctactgtaactcaatggcatcacatttctatacaaccaacttcatcttttggagaattaaagatggtattggcaatggtaactggtttagaaccaaatgagcaaagactattatacaaagggaaagaaagagaggattgtgaatacttgcacatggtgggggtgaaagacaaagacaaagtgttactctttcaagatccatctatcaaagagaggaaacttgcaacaaatggacatgtccaagatataggatccacttaccacaccatttgtgtctaatgagtaacattattagtgtgtgcaatttcttgccttttctttaaaaaactaaccccctcatccccctccactcccctcctcatcaagaaaatgagtgatgatggatcaagattggtgataagtatatgctcaccaacttagatcgactagattatgtggttgtttttatggtgtgtaatgccaaattttaattttatatgccctggtagcatatatcaaaattcaaaattaatgtgtaatctactccagcatctcgattaggttatcgagtttgtaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="81827" stop="83493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82127" g_stop="82398" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290">
            <donor d_prob="0.703" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82689" g_stop="83188" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="772" r_length="500" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U585320" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82127" e_stop="82398"/>
          <exon e_start="82689" e_stop="83188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTGGTAACTTCTCCTTTTTTGGGTCACTTTTACTGTCAAAATACTTTTAACTAGCAGGTCATAATCCAATTTTTTTTTTGAAAGTTTTATTAACTTTTTCCAACTATAATTCCCAGTTTTAAATTTGGTTTTGTGTATTTAAGTTTTGTCCGAGTCAAATTACACTATTTTGACCGACTCAAATAGTAGTCATGTAATTTGTGAAGTCAAACAGATATAACTTGTTACCAATTCATTTAAACTTAACTAGATTTTTGCATTGTTCTAAACTAGTTGTGGTTTATTGATGACAGGAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</genome_strand>
        <mrna_strand>TTCTTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG..................................................................................................................................................................................................................................................................................................GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573880" ref_strand="+" ref_description="SGN-U573880 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|157345348|emb|CAO14646.1| (e_value=3e-49) unnamed; (*ATH) AT5G14370.1 (e_value=2e-30) | Symbol: None | expressed protein | chr5:4631894-4633716 REVERSE | Aliases: F18O22.160, F18O22_160; (*SWP) sp|Q9C9A9|COL7_ARATH (e_value=8e-18) Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7; ">
      <seq>aaacattacactttttgagtactattcttccaaaaaaaaataaaataatggagtcaatcgattataattgttgttattatgcatatgtccgatgccggatgccggtcaaagaatggtaaatagaaaagccgaaacaaggtgaagcgcagaaaaccaaagttcctgagcctaagtgtggagctatcagagaaaaaaccccagaagtcagatgataggatggtttcatcatccaacggtagcacacatgatcatcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtactgcccaagatgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtcccagtccccccagattgttccagacatccatgacgatttcctcgccttcgacatgcctttttcgataaatgggcaactgatgagtagcagttcagttgtgcatagagtgccagaagtaattggaaatgaacaaagagaagtagaggatgaggagatgaaggcgggacgaagagaggcgagtgtaatgaggtacaaagagaagagacagaacagactcttttctaaaactatccgatatcaagttcgcaagctcaacgctgaaaaacgccctcgcgttaaggggagatttgttaagagggattgaagtgcctcagttggagaagtaaaccagtatgtgtattgtagtcttgatatataaactgttacaaaggagaaggagctcttgtcagtcaatgaaatatatatgtaagagttcaatttgtttcagataaaatattgttagctttcaaatagcaaaaagtccttgattgttttgtcatttaacactgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92358" stop="88640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92058" g_stop="91561" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91132" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="807" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89437" g_stop="89228" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="808" r_stop="1017" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89227" i_stop="89150" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89149" g_stop="88940" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1018" r_stop="1227" r_length="210" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U573880" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>1231</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92058" e_stop="91561"/>
          <exon e_start="91444" e_stop="91132"/>
          <exon e_start="89437" e_stop="89228"/>
          <exon e_start="89149" e_stop="88940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAAATAGATTGCCGGTAATTTATTGATTAATAATTCATTTAAGATAATAATTGGTATCTAATAACCTGCTGTGACATAGAGAGTGAAATTACACTGATTTAGGGTAAATGACATACACATTCATATGAATCCCACTTTGACGTGAGTAGAAAAACTAGGATGGGTACAAAATTAGGGCTCACATAAATATGAAAAATCAAACGGTAAAGAAATCGTTCACTGTTGTTGACCTGTGACTCGGGAAATGCTTTAATTTGACTTAGAAAAATGTTCCATTGCAACTTTAATTTTGCAAAAGATAAGATAAGAATCCTCGAGGCAATTTCAGCTTTGTGTCTGTGTTTCTCTTTCTTCTGGCCTATGAGAATTCCTGTTCTCTTCTTACTACTATAGCTTTTGCAGATTGTTTTTAATTTTCTTGTTTTCATCGAATAGAATAGTTTCTTTTCCTTTTTTCTTTTTTTGTGACAATGGTACTATTTTTACCGGGGCTAAGAATGTGTGCCTCCTACCAGTTGATAATATCACATGAGAATTATTTACTAACGGTGTTAGAAAGAATAATGCATGTATTAGTGTTGTGTATTACTAGTATCTTATTTGATATTTTTATTTATTTATGTATAATTAATGCTTGTGTATTAAGGTCTGCATGTATTTCTAGGTATTAGCAATTCAATGATTTTTGTACATGCATTCAATTGCCCCTCAAAATTTTTTTACATCTTTTTCATCATAAATATGGAGTATCTTTGTAAAAAAATTATTTAATACAATATATATGATTTTTAATACATCAAATCAAATAATACATTAAAATAATTGATGTAAATATACCTAATTCATATATTATTAATATATTATATTTAACATTATAATTATACACTCTATCAAATAATTTTCTTATTATATTTAACATCATCGTATACACTCTATCGAAGGAGGAGATAGTTGTGTGGTTAAATCTAAGGTGAAAGTGGTGGGTCGATAGATGTTAATGTTTAAACTGTGTATAGGACTGACCATATTAAGTGCTGAGCACTTTAATTGTCCTGACCCTTGTGGGCCTACTTTTTACTTAATTAGCTCAACCTTTTCCCCGTCTTTATTCGTCTGCAAGCTGTAGGCTACACCTCCATCAAACCATATAGTAAGAAATAGTAGCTCTCCGTCAAAACTTAATAAAACACGTGTGAATTTTTATCATAATTCTAGCACTAGATAGTCCTAATTTTTAATCCTTTCAGTTAGTTAGGTCCGCTCAATAAAATTTATAATATTATTTAGAAAGACGTTAAACTTATTTTGCAATGTAATAAACTTGCATGATTTTTGGCTAGCTAATAGTAAAAACACAACCCGTAATATGTGTAGACAAAAAAATTTAGTTCAAACTGTAGAGTTTCATATCTTGTGGATGCAAATTAAGAGGACTTGTTTGATTATTGTGTTAAACATGACAAAATGAATTAGATAATTCAGAGGAATTGAGTTGAAAAATGACAAACATTATCATTGTGATTTGTATAGGGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGAACAAAGAGAAGTAGAGGATGAGGAGATGAAGGCGGGACGAAGAGAGGCGAGTGTAATGAGGTACAAAGAGAAGAGACAGAACAGACTCTTTTCTAAAACTATCCGATATCAAGTTCGCAAGCTCAACGCTGAAAAACGCCCTCGCGTTAAGGTACGTAAAATACATTATTGATTCATGTTGGTGAAATAAATAAAGTATTCGTCCATTCATGTCTTATAATTTTTACAGGGGAGATTTGTTAAGAGGGATTGAAGTGCCTCAGTTGGAGAAGTAAACCAGTATGTGTATTGTAGTCTTGATATATAAACTGTTACAAAGGAGAAGGAGCTCTTGTCAGTCAATGAAATATATATGTAAGAGTTCAATTTGTTTCAGATAAAATATTGTTAGCTTTCAAATAGCAAAAAGTCCTTGATTGTTTTGTCATTTAACACTGAA</genome_strand>
        <mrna_strand>AAACATTACACTTTTTGAGTACTATTCTTCCAAAAAAAAA--TAAA-A-TAATGGAGTCAATCGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATAGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGAACAAAGAGAAGTAGAGGATGAGGAGATGAAGGCGGGACGAAGAGAGGCGAGTGTAATGAGGTACAAAGAGAAGAGACAGAACAGACTCTTTTCTAAAACTATCCGATATCAAGTTCGCAAGCTCAACGCTGAAAAACGCCCTCGCGTTAAG..............................................................................GGGAGATTTGTTAAGAGGGATTGAAGTGCCTCAGTTGGAGAAGTAAACCAGTATGTGTATTGTAGTCTTGATATATAAACTGTTACAAAGGAGAAGGAGCTCTTGTCAGTCAATGAAATATATATGTAAGAGTTCAATTTGTTTCAGATAAAATATTGTTAGCTTTCAAATAGCAAAAAGTCCTTGATTGTTTTGTCATTTAACACTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595125" ref_strand="+" ref_description="SGN-U595125 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggttggttaggtgtattagatagttaaatttcaataatatttcatcaaatcacatagctacaacattacattatgtttggttctaaaaggttatcctttccgcaaattagaaattgtttaaatgacctgataacataaatttaaaagtaaggtatgaaaaactaacatttatcgaaaaaggcatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="90673" stop="91451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90976" g_stop="91151" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="186" r_length="176" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U595125" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>176</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90976" e_stop="91151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTATTAGATAGTGAAATATCAATAATATTTCATCAAATCACATAGCTACAACATTACATTATGTTTGGTTCTAAAAGGTTATCCTTTCCGCAAATTAGAAATCGTTTAAATGACCTGATAACATAAATTTAAAAGTAAGGTAAGAAAAACTAACATTTATCGAAAAAGGCATGT</genome_strand>
        <mrna_strand>GTGTATTAGATAGTTAAATTTCAATAATATTTCATCAAATCACATAGCTACAACATTACATTATGTTTGGTTCTAAAAGGTTATCCTTTCCGCAAATTAGAAATTGTTTAAATGACCTGATAACATAAATTTAAAAGTAAGGTATGAAAAACTAACATTTATCGAAAAAGGCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585251" ref_strand="+" ref_description="SGN-U585251 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|112863|sp|P24396|PEL18_SOLLC (e_value=8e-173) RecName:; (*ATH) AT3G27400.1 (e_value=2e-162) | Symbol: None | pectate lyase family protein, similar to pectate lyase GP:7547009 from (Vitis vinifera); contains Pfam profile: PF00544 pectate lyase | chr3:10141560-10144462 FORWARD | Aliases: K1G2.22; (*SWP) sp|P24396|PEL18_SOLLC (e_value=5e-174) Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612; ">
      <seq>gttcttttctacccccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctggcgatgcaaccccaattgggaaaaaaaatcgccagcgtttagctgattgcgccattgggtttggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccctaaacccggaaccctgagacatgctgttatacaagacgagcctttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaactcttataagaccatagatggtcgtggtgcgagtgttcacatttcaggtggtccgtgcattacaatccaccataccagcaacattataatacacgggattaatatacacgattgtaaacagagtggtaacggcaacattagggactcaccaaaccattccggatggtgggatgtttctgatggtgatggtatttcaatttttggagggaaaaacatttgggtggaccattgttcgttgtctaattgccacgacggtttaattgatgcaattcacggatctacagcaatcacgatatctaacaactatttcactcatcatgacaaggtgatgttgttgggacatagtgattcttttacacaggacaaaggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaagaatgccaaggtgcagacatggttacttccatgtggttaataatgactatactcactgggaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggaaacagatttcttgctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcagtggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcaggcaaacaggggcaggtgcatcatcatcatctacttatgccagagcttcaagcttaagcgctaggccttcttctttagttggatcaattaccacaaatgccggtcctgttaactgcaaaaaaggctctcgctgctagtaaatttaaatccagtggctactaaatttatttcaaaatggagaatgtacgatgactagttgacgatagtgaaagaagtagtgttttaattaagctgaaaatggtgtacggaaaatatatggagaccatttcgcaaaacttatatctcatcgttttctttttctcaatttttccatgaaaaactattactactaattattgtcatttgaacgtttgtttcttaatatagtgactatcttgcgtttttccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95682" stop="98268"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95981" g_stop="96111" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96557" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="497" r_length="366" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96633" g_stop="97153" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="1018" r_length="521" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97490" g_stop="97968" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1019" r_stop="1497" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U585251" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1496</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585251" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95981" e_stop="96111"/>
          <exon e_start="96193" e_stop="96557"/>
          <exon e_start="96633" e_stop="97153"/>
          <exon e_start="97490" e_stop="97968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGG-AAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAGGTCAAAAGCAGATCCAGACTTGATATTTCATTATTTTCTAAAAATTTATTATATAGTCGATTAACATTGTTTCAGGTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTA</genome_strand>
        <mrna_strand>GTTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAG...........................................................................GTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564542" ref_strand="+" ref_description="SGN-U564542 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>aacttttttccatcaaaaagaagaaaaaaaatcaaaaaataaaaaagtagtaaaaatggctcgtcaagttattgttttggctctggtatttgttgccattgctggatttgcttcggcagataattccccaagcagttcccctgctgcatccccatccacatcagcaacaacccccgcaacatcaccatccacatcagcaacatcccctgcatcatcaccatccacatccactccagcagcagcttcaccaaacagcgctagtgctaatgcacctgctgccgcacccacaaccccatcatcctctccaaaggcaagtaccccatcatcatcatctccatcatcatcaccatccccatcatcatcagcatcatctcctaaatcttcaaattccggttctgtttcttcttcctcttctccaacttcaactgccgaaactccggaagtagaacccgcatcaccaccatctcccgacagcgaaactactaccgctaccgctcccgccacttctacacctgctgaggcacccgccgccgacgccagtggcgcagctacattgaaggctgtctcctctgtttttgctgctgcagtcgctgccgcattcttcttctaattgattcattaatcaatactattttttaaaaattcttgattctgtgaaaatttatttttcacagatggaaatttattacttaaaaaaagagagaacatctaactaatttgttgatttagtgacatgtacttgtaacttccatcatgtatattttggtgttttaatttgctttaataaaatgatcaaatgaaaaagatctgatcgttcgaataaatatttcatttgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="100443" stop="99036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100159" g_stop="99391" g_length="769"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="773" r_length="773" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U564542" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100159" e_stop="99391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTTTTCCATCAAAAAGAAGAAAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCAT---CAT-C-CA--CA--CCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTTCTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAAATTCTTAATTCTGTG-AAATTTATTTTTCACAGATGGAAATTTATTACTTAAAAAAAGAGAGAACATCTAACTAATTTGTTGATTTAGTAACATGTACTTGTAACTTCCATCATGTATATTTTGTTGTTTTA</genome_strand>
        <mrna_strand>AACTTTTTTCCATCAAAAAGAAG--AAAAAAAATC-AAAAAATAAAAAAGTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGGATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCCCCATCCACATCAGCAACAACCCCCGCAACATCACCATCCACATCAGCAACATCCCCTGCATCATCACCATCCACATCCACTCCAGCAGCAGCTTCACCAAACAGCGCTAGTGCTAATGCACCTGCTGCCGCACCCACAACCCCATCATCCTCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCA---TCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCCTCTTCTCCAACTTCAACTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTACTACCGCTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCTGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAAATTCTTGATTCTGTGAAAATTTATTTTTCACAGATGGAAATTTATTACTTAAAAAAAGAGAGAACATCTAACTAATTTGTTGATTTAGTGACATGTACTTGTAACTTCCATCATGTATATTTTGGTGTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595672" ref_strand="+" ref_description="SGN-U595672 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>catctccatcatactcaccatccccatcatcatcaacgacagctcctaaatattcaaaacccggttctgtgacttcttcctcttgctccaacttcaactgccgaaactcccgaagtataacccgcatcaccaccatctcccgactgcgaaactactaccgctaccgctcccgccacttctactcctgctgaggcacccgccgccgacaccagtggcgcaggctacattgaaggctgtctcctctgtttttgctgctgcagtcgctgccgcattcttcttctaattgattcattaatcaatactatttcttaaaaattcttgattctgtgaaaatttatttttcacagatggaaatttattacttataacaagagagaacatctaactaatttgttgatttagtgacatgtacttgtaacttccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="100136" stop="99112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99836" g_stop="99412" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U595672" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99836" e_stop="99412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTT-CTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCA-GCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAAATTCTTAATTCTGTG-AAATTTATTTTTCACAGATGGAAATTTATTACTTAAAAAAAGAGAGAACATCTAACTAATTTGTTGATTTAGTAACATGTACTTGTAACTTCCAT</genome_strand>
        <mrna_strand>CATCTCCATCAT-A-C-TCACCATCCCCATCATCATCAACGACAGCTCCTAAATATTCAAAACCCGGTTCTGTGACTTCTTCCTCTTGCTCCAACTTCAACTGCCGAAACTCCCGAAGTATAACCCGCATCACCACCATCTCCCGACTGCGAAACTACTACCGCTACCGCTCCCGCCACTTCTACTCCTGCTGAGGCACCCGCCGCCGACACCAGTGGCGCAGGCTACATTGAAGGCTGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTCTTAAAAATTCTTGATTCTGTGAAAATTTATTTTTCACAGATGGAAATTTATTACTTATAACAAGAGAGAACATCTAACTAATTTGTTGATTTAGTGACATGTACTTGTAACTTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595670" ref_strand="+" ref_description="SGN-U595670 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccctnataatttgcacaggttttttctgtttaaaaaactactgcaaatattgaaggatcattattctttcaaactttttccatcaaaaagaagaaaaaaaaatctaaaaaataaaaaattagtaaaaatggctcgtcaagttattgttttggctctggtatttgttgccattgctgtatttgcttcggcagataattccccaagcagttcccctgctgcatcaccatccacatcagcaacaacccctgcatcatcaccatccacatcagtaacatcccctgcatcatcatccacaccagcagcagcttcaccaaacagcggtagtgctaatgcacctgctgccgcaccatcatcctctgaatcatctccaaaggcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="100528" stop="99550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100228" g_stop="99856" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U595670" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100228" e_stop="99856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTATTAATTTGCACAG-TTTTTTCTGTTTAAAAAACTACTGCAAATATTGAAGGATCATTATTCTTTCAAACTTTTTCCATCAAAAAGAAGAAAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCATCATCCACACCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAG</genome_strand>
        <mrna_strand>CCCTNATAATTTGCACAGGTTTTTTCTGTTTAAAAAACTACTGCAAATATTGAAGGATCATTATTCTTTCAAACTTTTTCCATCAAAAAGAAG-AAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGTAACATCCCCTGCATCATCATCCACACCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588438" ref_strand="+" ref_description="SGN-U588438 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttgggatttattggtcaggctttgtgtaactgttgcagtctaacatagataagccatcatcttagaagcttttagagcaattctgaagaacttttgagaaattcttccacatctatagatagttgttgctgttatttacaattatctgaactctgaagaacacggatcgatagcttcttgttgttattatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106244" stop="104993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105944" g_stop="105293" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U588438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105944" e_stop="105293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</genome_strand>
        <mrna_strand>CTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566462" ref_strand="+" ref_description="SGN-U566462 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>tttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106407" stop="105180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106107" g_stop="105480" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U566462" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106107" e_stop="105480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGG</genome_strand>
        <mrna_strand>TTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588439" ref_strand="+" ref_description="SGN-U588439 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttcggacgaggttattctttctttctttctctttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106428" stop="105352"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106139" g_stop="105652" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U588439" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106139" e_stop="105652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAG</genome_strand>
        <mrna_strand>TTCG-GACGAGGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586161" ref_strand="+" ref_description="SGN-U586161 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345367|emb|CAO14665.1| (e_value=1e-91) unnamed; (*ATH) AT3G01660.1 (e_value=2e-80) | Symbol: None | expressed protein, similar to putative protein GB:CAB45319 (Arabidopsis thaliana) | chr3:245485-246439 FORWARD | Aliases: F4P13.20, F4P13_20; ">
      <seq>gcccaagacatggaaatccccaaacttacacttgtttcctcttccatccaaaaccaaaacacagccctcaataataataactccaaaagcctataataatgaagataacaattcaacagcaggaaaaatcaaacgaatggtacttactcaacaaggaagaaccaaactaaacattttaccagacaaggaattttatgcctatccaagattcgtcacacacgtcgatgatcgtttcatttccaatttaaccgatctttacaggaaatgtttgaaacctgaatttgaaattcttgaccttatgagctcatgggtcagtcatttaccacaagaagtgaagtacaaaaaggtggttggtcatggacttaatgcccaagagctagcaaaaaatcccaaattggattatttctttgtgagggatttgaatgaagatgagaaatttgagtttgaaaattgtagttttgatgctgttttatgcactgtcagtgtgcagtatcttcaacagcctgagaaggttttcgcggaagtatttcgaattctaagacctggaggagtgtttattgtaagtttcagtaacagattgttctacgataaagcaattagtgcctggagggacagtacaggatacggggagagtgcaacttgtggtacaatattttcaatgtattaagggatttacagagccacaagtgattcgtaaattaccaactaatgatgatcaacanaataaatcacctctcagtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="108229" stop="106626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107930" g_stop="107670" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107601" g_stop="107352" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="511" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107351" i_stop="107157" i_length="195">
            <donor d_prob="0.626" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107156" g_stop="106926" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="743" r_length="232" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-U586161" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107930" e_stop="107670"/>
          <exon e_start="107601" e_stop="107352"/>
          <exon e_start="107156" e_stop="106926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAGTGATAAGGTTATATTATTAACTAAATTTTGCATTAAGAACACAATGTTTAGTTTCTATTTTGATCATTGTGTTACTAATACAATGTTATTAAATTTCAGGTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATAC-GGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAA</genome_strand>
        <mrna_strand>GCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG....................................................................GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG...................................................................................................................................................................................................GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACANAATAAATCACCTCTCAGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586160" ref_strand="+" ref_description="SGN-U586160 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|217073308|gb|ACJ85013.1| (e_value=8e-36) unknown; (*ATH) AT3G01660.1 (e_value=1e-35) | Symbol: None | expressed protein, similar to putative protein GB:CAB45319 (Arabidopsis thaliana) | chr3:245485-246439 FORWARD | Aliases: F4P13.20, F4P13_20; ">
      <seq>cttgattctctttatcatctaattaagttaccttctcaggctgttgaagatactgcacactgacagtgcataaaacagcatcaaaactacaattttcaaactcaaatttctcatcttcattcaaatccctcacaaagaaataatccaatttgggattttttgctagctcttgggcattaagtccatgaccaaccacctttttgtacttcacttcttgtggtaaatgactgacccatgagctcataaggtcaagaatttcaaattcaggtttcaaacatttcctataaaaacagcgcaggggagtcaaattaatcaataacatatttgaacttaattttgacaccgttacctgtaaagatcggttaaattggaaatgaaacgatcatcgacgtgtgtgacgaatcttggataggcataaaattccttgtctggtaaaatgtttagtttggttcttccttggtgagtaagtaccattcgtttgatttttcctgctgttgaattgttatcttcattattataggcttttggagttattattattgagggctgtggtttggttttggatggaaaaagaaacaaatgtaagtttggggatttccatgtcttgggatgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="107021" stop="108234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107321" g_stop="107935" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="615" r_length="615" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-U586160" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107321" e_stop="107935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGTTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGTTTTGGTTTTGGATGGAAGAGGAAACAAGTGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGA</genome_strand>
        <mrna_strand>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGGTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGGTTTGGTTTTGGATGGAAAAAGAAACAAATGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>32</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="4056" PGL_stop="5648"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4056" e_stop="4240"/>
            <exon e_start="4405" e_stop="4487"/>
            <exon e_start="4559" e_stop="4788"/>
            <exon e_start="4909" e_stop="4958"/>
            <exon e_start="5063" e_stop="5137"/>
            <exon e_start="5447" e_stop="5648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.997" e_score="0.984"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="4056" e_stop="4240" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.997">
            <gDNA_intron_boundary i_start="4241" i_stop="4404" i_length="164"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4405" e_stop="4487" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4488" i_stop="4558" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4559" e_stop="4788" e_length="230"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.999">
            <gDNA_intron_boundary i_start="4789" i_stop="4908" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4909" e_stop="4958" e_length="50"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4959" i_stop="5062" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5063" e_stop="5137" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.961">
            <gDNA_intron_boundary i_start="5138" i_stop="5446" i_length="309"/>
          </intron>
          <exon e_serial="6" e_score="0.980">
            <gDNA_exon_boundary e_start="5447" e_stop="5648" e_length="202"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4056" stop="4240"/>
              <exon start="4405" stop="4487"/>
              <exon start="4559" stop="4788"/>
              <exon start="4909" stop="4958"/>
              <exon start="5063" stop="5137"/>
              <exon start="5447" stop="5648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599370" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG : GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG : AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT : ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG : TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG : CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACGTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</gDNA_template>
            <first_frame> G  D  D  K  V  E  G  L  L  S  P  K  F  R  S  V  A  A  M  A  G  W  D  E  E  A  L  L  M  A  S  L  V  V  E  D  T  P  D  R  L  S  K  Q  K  K  R  S  D  L  L  H  F  K  T  P  P  T  N  S  R  R :   K  R  R  A  Q  K  R  S  P  A  S  I  T  A  T  V  L  D  L  E  D  Q  D  T  A  K  Q   : E  S  E  K  K  E  A  E  L  K  L  D  E  K  G  D  E  A  L  E  E  Q  G  C  S  V  A  T  S  S  T  K  K  I  E  P  K  S  I  E  K  A  D  T  K  E  A  E  A  S  E  E  Q  G  C  S  V  S  S  S  S  A  A  F  P  S  I  D  L  L  R  E  E  L  S  C  A  :  I  C  L  E  I  C  F  E  P  S  T  T  P  C  G  H  S :   F  C  K  K  C  L  R  S  A  A  D  K  C  G  K  K  C  P  K  C  R  Q  L  I  S :   N  G  R  S  C  T  V  N  T  V  L  W  N  T  I  Q  L  L  F  P  K  E  V  E  T  R  K  A  A  A  D  L  S  S  R  E  A  K  R  Q  S  P  V  R  A  V  A  T  H  S  N  S  R  T  T  R  V  L  L  L  N  S  P  E  S  G  P </first_frame>
            <second_frame>  E  M  I  K  S  K  G  C  *  A  P  S  S  G  R  W  Q  L  W  L  V  G  M  K  R  L  F  S  W  P  V  L  L  S  K  T  H  L  I  A  F  L  S  K  R  N  V  L  I  C  C  I  S  R  L  P  Q  Q  I  L  E   : G  K  E  G  L  R  K  G  A  L  R  P  *  L  Q  L  F  L  I  W  K  T  K  T  L  Q  S  K  :  K  A  R  K  R  R  Q  N  *  N  *  T  R  K  E  M  R  H  W  K  N  R  V  V  L  L  L  H  L  L  L  R  R  *  N  Q  N  P  L  R  K  Q  T  R  K  K  L  K  H  Q  R  N  R  G  V  L  F  L  L  L  L  Q  H  F  P  P  L  I  Y  F  V  K  S  F  L  V  L :   F  V  W  R  S  V  L  N  R  V  P  L  L  V  V  T   : V  F  V  R  S  V  C  D  L  L  L  I  N  V  E  R  N  V  P  S  A  G  S  L  S   : A  M  V  D  H  A  L  *  I  Q  Y  F  G  I  Q  F  N  C  C  F  P  K  K  *  K  Q  E  K  Q  L  L  I  *  V  V  E  K  L  N  V  K  V  Q  *  E  L  L  L  L  I  L  T  A  E  R  Q  E  S  C  Y  L  T  V  Q  N  L  V   </second_frame>
            <third_frame>   R  *  *  S  R  R  V  A  E  P  Q  V  P  V  G  G  S  Y  G  W  L  G  *  R  G  S  S  H  G  Q  S  C  C  R  R  H  T  *  S  P  F  *  A  K  E  T  F  *  F  A  A  F  Q  D  S  P  N  K  F  *  K  :  E  K  K  G  S  E  K  E  P  C  V  H  N  C  N  C  S  *  S  G  R  P  R  H  C  K  A  R :   K  R  E  K  G  G  R  I  E  I  R  R  E  R  R  *  G  I  G  R  T  G  L  F  C  C  Y  I  F  Y  *  E  D  R  T  K  I  H  *  E  S  R  H  E  R  S  *  S  I  R  G  T  G  V  F  C  F  F  F  F  C  S  I  S  L  H  *  S  T  S  *  R  A  F  L  C   : Y  L  F  G  D  L  F  *  T  E  Y  H  S  L  W  S  Q  :  F  L  *  E  V  F  A  I  C  C  *  *  M  W  K  E  M  S  Q  V  Q  A  A  Y  Q  :  Q  W  *  I  M  H  C  K  Y  S  T  L  E  Y  N  S  T  V  V  S  Q  R  S  R  N  K  K  S  S  C  *  F  E  *  *  R  S  *  T  S  K  S  S  K  S  C  C  Y  S  F  *  Q  Q  N  D  K  S  P  A  T  *  Q  S  R  I  W  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4056" stop="4240"/>
                    <exon start="4405" stop="4487"/>
                    <exon start="4559" stop="4788"/>
                    <exon start="4909" stop="4958"/>
                    <exon start="5063" stop="5137"/>
                    <exon start="5447" stop="5648"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDDKVEGLLSPKFRSVAAMAGWDEEALLMASLVVEDTPDRLSKQKKRSDLLHFKTPPTNSRRKRRAQKRSPASITATVLDLEDQDTAKQESEKKEAELKLDEKGDEALEEQGCSVATSSTKKIEPKSIEKADTKEAEASEEQGCSVSSSSAAFPSIDLLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVETRKAAADLSSREAKRQSPVRAVATHSNSRTTRVLLLNSPESGP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="8644" PGL_stop="7447"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8644" e_stop="8266"/>
            <exon e_start="8141" e_stop="7447"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="0.997"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="8644" e_stop="8266" e_length="379"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="8265" i_stop="8142" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="8141" e_stop="7447" e_length="695"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8644" stop="8266"/>
              <exon start="8141" stop="7447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563043" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTATGTGGGGGAGGTTTCTAGCAAACCATAACAACTGATTAGAAGGGTTTTTATTTGAAGATGAAAAGAGAATAATAATTGAAGTTGAATGAAAAAGAAGGAAGTTGCAACAAAGTGGGTGACCTCGTAACTTGTTTCTTTATTGGAACAAGACTGCTTGACCACGTACAACTCTCAAATACTAGCAATATATGCTCAAAAACTGAATAGCACAAGTCGATGATGAAACAGAGACTGCTGAATTTGAACCATTAAAATCGTGGGTATGGCTCAAATTCCAATCAAACATCGTAAAAAACATGTAGCAGTTCGAAGATCTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG : GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCGTCTGCAGCCTGACTTTCCAGCTCAAAAACAGCACAACATGTGTGTATGCACAATGTTAAGAAAC</gDNA_template>
            <first_frame> S  Y  V  G  E  V  S  S  K  P  *  Q  L  I  R  R  V  F  I  *  R  *  K  E  N  N  N  *  S  *  M  K  K  K  E  V  A  T  K  W  V  T  S  *  L  V  S  L  L  E  Q  D  C  L  T  T  Y  N  S  Q  I  L  A  I  Y  A  Q  K  L  N  S  T  S  R  *  *  N  R  D  C  *  I  *  T  I  K  I  V  G  M  A  Q  I  P  I  K  H  R  K  K  H  V  A  V  R  R  S  F  F  W  C  I  L  C  F  A  A  F  T  F  S  S  L  L  F  Q   : G  F  H  Q  W  R  P  A  T  T  T  A  L  T  A  V  K  P  I  I  Q  T  V  E  F  P  D  E  T  V  V  F  L  K  Y  P  P  S  T  P  L  F  T  K  H  D  L  Y  C  L  Y  L  D  P  N  S  S  Q  P  P  E  S  V  E  N  D  E  L  L  A  Q  Q  L  V  R  C  P  L  V  K  P  R  G  V  L  T  S  L  F  V  K  S  T  G  Y  T  L  S  I  G  P  S  R  R  W  N  S  L  A  Y  E  A  M  I  D  R  D  N  T  T  I  V  F  V  K  G  F  N  L  R  G  G  R  Q  S  H  A  S  K  F  K  C  V  Y  G  W  D  V  K  N  P  K  L  V  L  Q  S  D  V  V  S  I  A  Q  E  V  V  R  C  N  T  P  V  S  I  L  N  N  P  E  R  F  I  G  T  S  N  M  P  I  K  V  S  V  R  M  V  G  K  E  P  L  D  S  I  A  S  P  K  R  R  L  Q  P  D  F  P  A  Q  K  Q  H  N  M  C  V  C  T  M  L  R  N </first_frame>
            <second_frame>  V  M  W  G  R  F  L  A  N  H  N  N  *  L  E  G  F  L  F  E  D  E  K  R  I  I  I  E  V  E  *  K  R  R  K  L  Q  Q  S  G  *  P  R  N  L  F  L  Y  W  N  K  T  A  *  P  R  T  T  L  K  Y  *  Q  Y  M  L  K  N  *  I  A  Q  V  D  D  E  T  E  T  A  E  F  E  P  L  K  S  W  V  W  L  K  F  Q  S  N  I  V  K  N  M  *  Q  F  E  D  L  S  S  G  V  S  S  A  L  L  P  S  L  S  L  L  Y  Y  F  K  :  G  F  I  N  G  G  R  R  Q  P  Q  P  *  P  L  L  S  Q  L  Y  K  P  S  N  S  R  T  R  Q  L  F  S  *  N  T  L  L  Q  L  P  Y  S  Q  N  M  T  Y  T  A  S  T  L  I  L  T  L  L  N  L  L  N  Q  L  K  T  M  N  Y  W  P  N  S  S  F  D  V  P  W  L  S  H  V  E  S  *  R  H  F  S  S  S  L  P  V  T  P  S  P  L  D  H  H  V  G  G  I  R  W  P  M  R  P  *  S  I  A  I  T  R  P  *  C  L  L  K  G  L  I  F  V  V  E  D  N  R  T  L  Q  N  S  S  V  F  M  V  G  M  L  R  I  P  N  L  C  Y  N  Q  M  L  Y  P  L  L  K  K  L  F  D  V  I  P  Q  *  A  Y  *  I  I  Q  R  G  L  L  V  L  V  T  C  P  L  R  F  L  L  E  W  L  V  R  N  L  *  T  L  *  R  V  L  N  A  V  C  S  L  T  F  Q  L  K  N  S  T  T  C  V  Y  A  Q  C  *  E   </second_frame>
            <third_frame>   L  C  G  G  G  F  *  Q  T  I  T  T  D  *  K  G  F  Y  L  K  M  K  R  E  *  *  L  K  L  N  E  K  E  G  S  C  N  K  V  G  D  L  V  T  C  F  F  I  G  T  R  L  L  D  H  V  Q  L  S  N  T  S  N  I  C  S  K  T  E  *  H  K  S  M  M  K  Q  R  L  L  N  L  N  H  *  N  R  G  Y  G  S  N  S  N  Q  T  S  *  K  T  C  S  S  S  K  I  F  L  L  V  Y  P  L  L  C  C  L  H  F  L  F  S  T  I  S  R :   V  S  S  M  A  A  G  D  N  H  S  P  N  R  C  *  A  N  Y  T  N  R  R  I  P  G  R  D  S  C  F  P  K  I  P  S  F  N  S  L  I  H  K  T  *  P  I  L  P  L  P  *  S  *  L  F  S  T  S  *  I  S  *  K  R  *  I  I  G  P  T  A  R  S  M  S  P  G  *  A  T  W  S  P  D  V  T  F  R  Q  V  Y  R  L  H  P  L  H  W  T  I  T  S  V  E  F  V  G  L  *  G  H  D  R  S  R  *  H  D  H  S  V  C  *  R  V  *  S  S  W  W  K  T  I  A  R  F  K  I  Q  V  C  L  W  L  G  C  *  E  S  Q  T  C  V  T  I  R  C  C  I  H  C  S  R  S  C  S  M  *  Y  P  S  E  H  T  E  *  S  R  E  V  Y  W  Y  *  *  H  A  H  *  G  F  C  *  N  G  W  *  G  T  F  R  L  Y  S  E  S  *  T  P  S  A  A  *  L  S  S  S  K  T  A  Q  H  V  C  M  H  N  V  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8395" stop="8266"/>
                    <exon start="8141" stop="7447"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIKIVGMAQIPIKHRKKHVAVRRSFFWCILCFAAFTFSSLLFQGFHQWRPATTTALTAVKPIIQTVEFPDETVVFLKYPPSTPLFTKHDLYCLYLDPNSSQPPESVENDELLAQQLVRCPLVKPRGVLTSLFVKSTGYTLSIGPSRRWNSLAYEAMIDRDNTTIVFVKGFNLRGGRQSHASKFKCVYGWDVKNPKLVLQSDVVSIAQEVVRCNTPVSILNNPERFIGTSNMPIKVSVRMVGKEPLDSIASPKRRLQPDFPAQKQHNMCVCTMLRN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="19313" PGL_stop="21736"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19313" e_stop="19425"/>
            <exon e_start="20843" e_stop="20950"/>
            <exon e_start="21111" e_stop="21175"/>
            <exon e_start="21262" e_stop="21736"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.971" e_score="0.982"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.667" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="19313" e_stop="19425" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.971">
            <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20843" e_stop="20950" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21111" e_stop="21175" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.667">
            <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="21262" e_stop="21736" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19313" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586578" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT : GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG : GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG : GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</gDNA_template>
            <first_frame> *  G  D  S  T  Y  G  K  *  M  *  S  G  E  V  F  E  A  Y  T  P  Q  *  I  L  H  A  S  P  D  L  L  F  N  L  L  N  L :   W  R  W  S  L  K  T  V  V  C  I  S  C  Q  L  S  I  *  E  Y  T  A  P  L  L  I  V  R  S  D  R  F  A  V  R  R :   S  Y  L  V  G  V  M  S  E  L  C  L  Q  N  L  L  E  I  M  E  *   : G  Y  Y  L  M  T  C  I  R  L  E  S  L  H  G  T  T  S  T  I  L  E  V  T  N  L  P  S  *  E  I  T  S  E  L  *  R  N  M  D  *  A  A  I  H  L  D  E  D  D  L  K  T  C  P  *  E  G  *  S  T  L  F  K  L  E  T  S  S  L  Y  M  L  R  V  K  L  *  H  K  T  V  L  L  Q  I  F  *  R  L  A  L  D  M  L  S  Y  V  Q  G  Y  L  W  C  A  I  F  *  I  *  R  L  T  C  D  T  K  E  V  I  S  F  *  G  T  L  R  N  L  F  V  C  N  L  D  L  G  S  M  L  V  L  Q  N  N  M  L  D  *  M  K  G  T  V  N  V  E  S   </first_frame>
            <second_frame>  R  E  I  R  L  T  E  N  E  C  D  Q  E  R  C  S  K  H  I  H  H  S  R  F  S  T  P  H  Q  I  C  S  S  T  S  *  I   : C  G  G  G  V  *  K  R  *  S  V  *  V  V  S  *  V  F  E  N  I  Q  P  R  C  *  *  *  D  Q  I  D  L  R  *  E   : G  H  I  W  *  A  S  C  R  N  Y  V  C  R  T  Y  W  K  L  W  S  E  :  V  I  I  *  *  L  A  *  D  W  N  L  Y  M  G  L  L  L  P  S  W  K  *  Q  I  C  P  H  E  K  L  H  Q  N  S  E  E  T  W  T  K  P  R  S  T  *  T  K  M  T  L  R  R  A  H  E  K  A  D  P  H  Y  L  S  W  K  H  P  P  Y  I  C  S  E  *  N  C  D  I  K  L  Y  C  C  K  Y  S  K  D  *  L  L  I  C  Y  H  M  F  R  D  I  C  G  V  L  F  S  R  S  R  D  *  H  V  I  Q  K  R  S  L  V  S  K  E  H  *  G  T  S  S  F  V  I  *  I  W  E  A  C  W  C  C  R  T  T  C  L  I  E  *  K  E  Q  *  T  L  K  V  </second_frame>
            <third_frame>   G  R  F  D  L  R  K  M  N  V  I  R  R  G  V  R  S  I  Y  T  T  V  D  S  P  R  L  T  R  F  A  L  Q  P  P  K  F  :  V  E  V  E  F  E  N  G  S  L  Y  K  L  S  A  E  Y  L  R  I  Y  S  P  A  V  D  S  K  I  R  S  I  C  G  E  K  :  V  I  S  G  R  R  H  V  G  I  M  S  A  E  P  I  G  N  Y  G  V  R :   L  L  F  D  D  L  H  K  T  G  I  F  T  W  D  Y  F  Y  H  L  G  S  N  K  F  A  L  M  R  N  Y  I  R  T  L  K  K  H  G  L  S  R  D  P  P  R  R  R  *  P  *  D  V  P  M  R  R  L  I  H  T  I  *  A  G  N  I  L  L  I  Y  A  Q  S  E  I  V  T  *  N  C  T  V  A  N  I  L  K  T  S  S  *  Y  V  I  I  C  S  G  I  F  V  V  C  Y  F  L  D  L  E  I  D  M  *  Y  K  R  G  H  *  F  L  R  N  I  K  E  P  L  R  L  *  F  R  F  G  K  H  V  G  V  A  E  Q  H  A  *  L  N  E  R  N  S  K  R  *  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19315" stop="19425"/>
                    <exon start="20843" stop="20950"/>
                    <exon start="21111" stop="21175"/>
                    <exon start="21262" stop="21409"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRFDLRKMNVIRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIRSICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFALMRNYIRTLKKHGLSRDPPRRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="23314" PGL_stop="24769"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23314" e_stop="23606"/>
            <exon e_start="23703" e_stop="24239"/>
            <exon e_start="24627" e_stop="24769"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.972" e_score="0.997"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="23314" e_stop="23606" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.972">
            <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23703" e_stop="24239" e_length="537"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="24240" i_stop="24626" i_length="387"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24627" e_stop="24769" e_length="143"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23314" stop="23606"/>
              <exon start="23703" stop="24239"/>
              <exon start="24627" stop="24769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565414" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG : GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG : AGCTCCAGCTCTAAACTTGAGGATGATGCTGCATCAGTGACAAGCAAGAAAAAATCTGCTTTTTCTTCATTCAAATCAGCAGTCTACTCCAAAAAATCAAAATTTCCATTTCCGCCGACTAGGCATAGTATTCCTCTTGATGT</gDNA_template>
            <first_frame> R  S  T  W  P  K  F  K  K  M  T  P  L  A  S  S  Y  S  M  S  G  L  S  *  T  T  C  I  A  F  F  T  F  E  F  Q  I  *  M  L  R  S  K  N  R  E  T  D  K  S  H  K  K  S  F  L  S  N  G  T  I  I  I  L  L  I  F  S  G  S  I  A  D  *  *  W  K  I  Q  L  V  L  Y  M  L  S  L  M  L  L  L  Y  P  M  K  *  N  R :   E  T  L  C  M  H  L  G  S  Q  F  L  L  G  D  L  C  L  S  L  *  I  G  K  N  G  Q  L  F  L  I  K  D  M  *  R  R  L  R  G  M  L  S  Q  V  L  L  P  K  K  K  L  S  L  K  P  I  T  R  K  L  L  P  K  R  L  Q  L  C  L  N  K  P  I  N  K  T  P  I  L  K  L  P  R  I  Q  P  L  I  L  L  H  L  *  N  L  M  *  K  L  I  K  K  R  F  M  R  T  L  M  L  *  Q  Q  I  P  W  L  R  L  L  F  Q  L  L  M  W  R  R  *  R  A  S  P  Q  W  R  V  Q  V  L  L  K  L  Q  R  K  N  H  Q  T  T  L  R  M  V  K  P  K  K  Q  F  L  R  L  V  K  H  L  I  L  R  S  L  C  *  R  L  R :   A  P  A  L  N  L  R  M  M  L  H  Q  *  Q  A  R  K  N  L  L  F  L  H  S  N  Q  Q  S  T  P  K  N  Q  N  F  H  F  R  R  L  G  I  V  F  L  L  M  </first_frame>
            <second_frame>  E  A  L  G  L  N  L  K  K  *  H  L  *  L  L  L  T  L  *  V  A  F  L  K  Q  R  V  S  L  F  L  H  L  N  F  K  F  K  C  *  D  P  K  T  E  R  Q  I  R  A  I  K  N  H  F  *  V  T  A  Q  *  L  F  C  *  F  F  Q  V  P  *  Q  T  D  D  G  R  F  S  L  S  Y  T  C  F  L  L  C  F  C  Y  T  Q  *  N  K  T   : G  K  P  C  A  C  T  W  G  V  N  F  F  W  E  I  C  V  *  V  F  R  L  G  K  M  V  N  F  F  S  *  K  I  C  R  G  G  *  E  V  C  *  A  R  F  C  C  P  K  K  S  F  L  *  S  P  L  Q  E  N  C  C  P  K  G  C  S  F  A  *  T  S  Q  S  T  K  P  R  F  *  N  Y  Q  E  F  S  P  *  F  Y  F  T  C  E  T  S  C  R  S  *  S  R  R  G  S  *  E  P  *  C  F  N  N  R  F  H  G  *  G  F  C  F  S  C  *  C  G  G  D  R  E  R  V  P  S  G  G  S  R  Y  S  *  S  Y  R  E  R  T  I  K  P  H  *  E  W  *  N  P  R  N  S  F  *  D  *  *  N  I  S  Y  *  E  A  F  A  E  D  *   : E  L  Q  L  *  T  *  G  *  C  C  I  S  D  K  Q  E  K  I  C  F  F  F  I  Q  I  S  S  L  L  Q  K  I  K  I  S  I  S  A  D  *  A  *  Y  S  S  *  C </second_frame>
            <third_frame>   K  H  L  A  *  I  *  K  N  D  T  F  S  F  F  L  L  Y  E  W  P  F  L  N  N  V  Y  R  F  F  Y  I  *  I  S  N  L  N  A  E  I  Q  K  Q  R  D  R  *  E  P  *  K  I  I  F  K  *  R  H  N  N  Y  S  V  D  F  F  R  F  H  S  R  L  M  M  E  D  S  A  C  L  I  H  A  F  S  Y  A  S  A  I  P  N  E  I  K  Q  :  G  N  P  V  H  A  L  G  E  S  I  S  F  G  R  F  V  S  E  S  L  D  W  E  K  W  S  T  F  S  H  K  R  Y  V  E  E  A  E  R  Y  A  K  P  G  S  V  A  Q  K  K  A  F  F  E  A  H  Y  K  K  I  A  A  Q  K  A  A  A  L  L  E  Q  A  N  Q  Q  N  P  D  S  E  I  T  K  N  S  A  P  D  S  T  S  L  V  K  P  H  V  E  A  N  Q  E  E  V  H  E  N  P  D  A  L  T  T  D  S  M  V  K  A  S  V  S  V  A  D  V  E  E  I  E  S  E  S  P  V  E  G  P  G  T  P  E  A  T  E  K  E  P  S  N  H  I  E  N  G  E  T  Q  E  T  V  S  E  I  S  E  T  S  H  T  E  K  P  L  L  K  T  K  :  S  S  S  S  K  L  E  D  D  A  A  S  V  T  S  K  K  K  S  A  F  S  S  F  K  S  A  V  Y  S  K  K  S  K  F  P  F  P  P  T  R  H  S  I  P  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23487" stop="23606"/>
                    <exon start="23703" stop="24239"/>
                    <exon start="24627" stop="24767"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHNNYSVDFFRFHSRLMMEDSACLIHAFSYASAIPNEIKQGNPVHALGESISFGRFVSESLDWEKWSTFSHKRYVEEAERYAKPGSVAQKKAFFEAHYKKIAAQKAAALLEQANQQNPDSEITKNSAPDSTSLVKPHVEANQEEVHENPDALTTDSMVKASVSVADVEEIESESPVEGPGTPEATEKEPSNHIENGETQETVSEISETSHTEKPLLKTKSSSSKLEDDAASVTSKKKSAFSSFKSAVYSKKSKFPFPPTRHSIPLD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="24890" PGL_stop="27136"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24890" e_stop="24998"/>
            <exon e_start="25088" e_stop="25146"/>
            <exon e_start="25738" e_stop="25837"/>
            <exon e_start="25928" e_stop="25990"/>
            <exon e_start="26479" e_stop="26589"/>
            <exon e_start="26777" e_stop="27136"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.991"/>
          <exon-intron don_prob="0.999" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.455" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="24890" e_stop="24998" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25088" e_stop="25146" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.891">
            <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25738" e_stop="25837" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="25928" e_stop="25990" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.455">
            <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26479" e_stop="26589" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187"/>
          </intron>
          <exon e_serial="6" e_score="0.992">
            <gDNA_exon_boundary e_start="26777" e_stop="27136" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24890" stop="24998"/>
              <exon start="25088" stop="25146"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="27136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571901" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG : GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG : TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG : AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG : GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG : ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATTGC</gDNA_template>
            <first_frame> T  Q  D  T  S  S  T  S  L  P  Q  E  G  K  F  K  G  C  S  R  Y  *  Q  G  I  *  A  L  C  N  S  T  *  D  S  Y   : G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  :  F  Q  V  F  H  S  L  P  K  Q  I  T  I  T  N  F  I  H  S  F  L  T  E  N  R  R  K  S  C  T  K  E  T   : E  A  *  R  K  I  Q  C  E  G  G  K  E  G  S  T  T  N  N  I  K   : G  E  S  R  N  G  T  *  E  T  W  T  K  L  L  L  Q  S  S  S  P  A  *  F  L  Q  G  N  R  N  S  K  R  S  C  K  K   : D  P  S  N  T  S  S  I  A  Q  T  W  K  N  A  I  S  Q  L  K  A  R  L  S  L  D  E  K  *  L  L  Q  E  S  K  K  E  D  *  L  K  K  L  T  N  P  S  L  L  A  K  S  S  V  L  L  E  C  V  S  I  G  Y  F  F  Q  E  N  V  L  E  V  C  L  S  L  I  *  F  K  E  K  Q  L  Q  N  L  V  *  K  A  I  Q  T  *  N  Y  F  N  H  N  H  L  P  F  I  L  T  F  S  S  Q  Y  C  P  H  T  F  K  L  </first_frame>
            <second_frame>  H  K  I  P  P  P  P  P  F  L  K  K  E  S  S  K  V  A  P  A  T  S  K  A  S  K  H  C  A  T  P  L  K  T  P  M  :  A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  S :   S  K  S  F  T  A  Y  R  N  K  L  Q  S  P  T  L  S  T  P  F  S  L  R  T  E  E  R  A  A  R  R  K  Q  :  K  L  E  E  K  F  N  A  K  E  E  K  K  V  Q  Q  Q  T  T  L  K  :  E  K  A  G  T  E  L  R  K  L  G  Q  S  F  C  F  K  A  R  P  L  P  D  F  Y  K  E  T  E  T  A  K  D  H  A  K  K  :  I  P  V  T  Q  A  P  L  P  K  R  G  R  M  P  Y  P  S  S  K  Q  G  L  V  S  M  K  N  D  S  C  K  N  P  R  K  K  T  S  *  K  N  S  Q  I  H  H  S  L  Q  R  V  V  S  Y  *  N  V  F  Q  L  G  I  S  S  K  R  M  F  W  R  C  V  F  P  *  Y  D  L  R  R  S  N  S  K  I  L  Y  K  K  L  S  R  R  K  I  I  L  T  T  I  I  Y  L  L  Y  *  R  S  Q  V  N  I  V  L  I  H  S  N  C </second_frame>
            <third_frame>   T  R  Y  L  L  H  L  P  S  S  R  R  K  V  Q  R  L  L  P  L  L  A  R  H  L  S  I  V  Q  L  H  L  R  L  L  W :   Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E   : V  P  S  L  S  Q  P  T  E  T  N  Y  N  H  Q  L  Y  P  L  L  S  H  *  E  Q  K  K  E  L  H  E  G  N  R :   S  L  K  K  N  S  M  R  R  R  K  R  R  F  N  N  K  Q  H  *  R :   R  K  Q  E  R  N  L  G  N  L  D  K  A  F  A  S  K  L  V  P  C  L  I  S  T  R  K  Q  K  Q  Q  K  I  M  Q  K  R :   S  Q  *  H  K  L  H  C  P  N  V  E  E  C  H  I  P  A  Q  S  K  A  *  S  R  *  K  M  T  L  A  R  I  Q  E  R  R  L  A  E  K  T  H  K  S  I  T  P  C  K  E  *  C  L  I  R  M  C  F  N  W  V  F  L  P  R  E  C  F  G  G  V  S  F  L  N  M  I  *  G  E  A  T  P  K  S  C  I  K  S  Y  P  D  V  K  L  F  *  P  Q  S  F  T  F  Y  I  N  V  L  K  S  I  L  S  S  Y  I  Q  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24891" stop="24998"/>
                    <exon start="25088" stop="25146"/>
                    <exon start="25738" stop="25837"/>
                    <exon start="25928" stop="25990"/>
                    <exon start="26479" stop="26589"/>
                    <exon start="26777" stop="26896"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKIPPPPPFLKKESSKVAPATSKASKHCATPLKTPMATSNGASNHPMTTPSSESRSSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAGTELRKLGQSFCFKARPLPDFYKETETAKDHAKKIPVTQAPLPKRGRMPYPSSKQGLVSMKNDSCKNPRKKTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="28292" PGL_stop="27536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28292" e_stop="27536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="28292" e_stop="27536" e_length="757"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28292" stop="27536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563230" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTAAACACTTTTATCTTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATG</gDNA_template>
            <first_frame> S  *  T  L  L  S  S  K  S  I  I  F  *  I  F  Y  S  *  R  K  S  F  I  L  F  F  K  N  E  E  R  R  S  P  T  R  Y  G  P  Y  L  P  N  F  T  L  S  M  E  P  K  T  R  A  Q  V  H  E  Q  V  Q  F  T  T  N  R  W  A  F  R  K  G  P  N  *  A  Q  *  P  F  Q  V  H  R  Q  V  R  *  T  Q  V  H  Q  L  P  C  S  S  S  C  K  I  Q  G  Q  N  *  G  H  T  K  V  K  G  M  R  R  R  R  F  V  G  Y  L  E  S  C  G  C  *  A  W  V  Q  F  F  R  V  F  S  Y  W  N  F  G  S  F  G  *  R  F  F  L  L  H  G  S  *  N  L  L  *  *  R  L  R  L  R  R  S  G  I  S  S  *  L  R  W  V  S  S  D  R  R  *  D  *  R  *  R  *  R  K  N  E  F  L  R  G  G  I  C  V  G  R  C  *  R  R  *  R  L  V  C  C  G  R  N  L  I  Q  F  L  P  T  V  F  V  L  T  C  *  T  K  I  V  T  F  L  *  L  Y  L  L  S  N  K  L  E  H  F  D  </first_frame>
            <second_frame>  V  K  H  F  Y  L  L  N  Q  S  F  F  E  F  F  I  R  R  E  K  V  S  F  Y  S  S  K  M  R  R  E  G  R  Q  H  G  M  V  R  T  Y  P  I  L  P  S  P  W  N  P  R  P  E  P  R  Y  M  N  K  S  N  S  P  P  T  A  G  L  F  A  K  V  P  T  K  P  S  N  H  S  K  F  T  G  K  C  G  R  P  R  C  T  S  C  H  V  H  P  A  A  K  S  K  D  K  T  K  G  T  Q  K  L  K  G  C  G  D  V  V  S  L  V  T  W  R  V  V  D  A  R  P  G  F  N  F  S  G  F  S  A  T  G  I  L  D  H  L  D  S  D  S  S  Y  Y  M  D  H  E  I  Y  Y  D  E  D  Y  G  Y  G  D  Q  E  L  V  V  D  S  D  G  S  P  A  I  G  V  E  I  E  D  N  D  E  E  K  M  S  F  C  E  V  G  F  V  W  E  D  V  E  E  D  E  D  W  C  V  V  E  G  I  *  F  S  S  F  Q  L  Y  L  C  *  P  V  E  Q  K  L  L  H  F  C  N  C  I  Y  C  Q  I  N  W  N  I  S  M </second_frame>
            <third_frame>   L  N  T  F  I  F  *  I  N  H  F  L  N  F  L  F  V  E  K  K  F  H  F  I  L  Q  K  *  G  E  K  V  A  N  T  V  W  S  V  L  T  Q  F  Y  P  L  H  G  T  Q  D  P  S  P  G  T  *  T  S  P  I  H  H  Q  P  L  G  F  S  Q  R  S  Q  L  S  P  V  T  I  P  S  S  P  A  S  A  V  D  P  G  A  P  A  A  M  F  I  Q  L  Q  N  P  R  T  K  L  R  A  H  K  S  *  R  D  A  A  T  S  F  R  W  L  L  G  E  L  W  M  L  G  L  G  S  I  F  Q  G  F  Q  L  L  E  F  W  I  I  W  I  A  I  L  L  I  T  W  I  M  K  F  T  M  M  K  I  T  V  T  E  I  R  N  *  *  L  T  P  M  G  L  Q  R  S  A  L  R  L  K  I  T  M  K  K  K  *  V  S  A  R  W  D  L  C  G  K  M  L  K  K  M  K  I  G  V  L  W  K  E  S  N  S  V  P  S  N  C  I  C  V  N  L  L  N  K  N  C  Y  I  S  V  I  V  F  T  V  K  *  I  G  T  F  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28291" stop="27635"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKHFYLLNQSFFEFFIRREKVSFYSSKMRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCGRPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVSLVTWRVVDARPGFNFSGFSATGILDHLDSDSSYYMDHEIYYDEDYGYGDQELVVDSDGSPAIGVEIEDNDEEKMSFCEVGFVWEDVEEDEDWCVVEGI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="43024" PGL_stop="40849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43024" e_stop="42981"/>
            <exon e_start="42068" e_stop="41889"/>
            <exon e_start="41814" e_stop="41682"/>
            <exon e_start="41601" e_stop="41512"/>
            <exon e_start="41428" e_stop="41304"/>
            <exon e_start="41154" e_stop="41112"/>
            <exon e_start="40958" e_stop="40948"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.316" acc_prob="0.000" e_score="0.523"/>
          <exon-intron don_prob="0.983" acc_prob="0.911" e_score="0.939"/>
          <exon-intron don_prob="0.594" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.700" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="0.984"/>
          <exon-intron don_prob="0.992" acc_prob="0.918" e_score="0.977"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.523">
            <gDNA_exon_boundary e_start="43024" e_stop="42981" e_length="44"/>
          </exon>
          <intron i_serial="1" don_prob="0.316" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42980" i_stop="42069" i_length="912"/>
          </intron>
          <exon e_serial="2" e_score="0.939">
            <gDNA_exon_boundary e_start="42068" e_stop="41889" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.911">
            <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41814" e_stop="41682" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.594" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41601" e_stop="41512" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="0.938" acc_prob="0.700">
            <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="0.984">
            <gDNA_exon_boundary e_start="41428" e_stop="41304" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149"/>
          </intron>
          <exon e_serial="6" e_score="0.977">
            <gDNA_exon_boundary e_start="41154" e_stop="41112" e_length="43"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.918">
            <gDNA_intron_boundary i_start="41111" i_stop="40959" i_length="153"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="40958" e_stop="40948" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43024" stop="42981"/>
              <exon start="42068" stop="41889"/>
              <exon start="41814" stop="41682"/>
              <exon start="41601" stop="41512"/>
              <exon start="41428" stop="41304"/>
              <exon start="41154" stop="41112"/>
              <exon start="40958" stop="40948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584430" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACATCCAAGAGGGAGTGTTATAGAACAATATAAACACCAAGAA : CTAGACACAAAAATAGGGATTTTACGATTCGATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG : TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAG : ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT : CGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA : CGGATTGCAGGTTGCTATGACAGTAACCAAGTACATTCCCCAG : GCTGTTATGAA</gDNA_template>
            <first_frame> D  I  Q  E  G  V  L  *  N  N  I  N  T  K  N :   *  T  Q  K  *  G  F  Y  D  S  I  F  V  F  N  L  V  C  *  L  M  A  S  W  N  S  V  P  L  E  V  L  Y  N  V  L  G  W  I  A  F  V  S  W  S  I  S  F  Y  P  Q  V  I  L  N  F  R  R  K  S :   V  V  G  L  N  F  D  F  V  V  L  N  L  T  K  H  S  S  Y  L  I  Y  N  A  S  M  F  F  S  C  A  V  Q  R  Q  Y  H  N  R  Y  G  K  N  E  :  M  I  P  V  A  A  N  D  V  A  F  S  T  H  A  L  L  L  T  A  F  T  L  F  Q  I  S  I  Y  D  :  R  G  N  Q  K  V  S  K  I  A  I  A  I  V  S  V  A  W  L  S  V  A  V  C  V  F  V  A  I  P  K  H  S  W  L  W  L  V  S  C  F  N :   G  L  Q  V  A  M  T  V  T  K  Y  I  P  Q  :  A  V  M   </first_frame>
            <second_frame>  T  S  K  R  E  C  Y  R  T  I  *  T  P  R   : T  R  H  K  N  R  D  F  T  I  R  F  L  S  S  I  *  F  V  N  *  W  L  L  G  I  P  F  H  W  K  C  C  I  M  F  W  D  G  L  R  L  C  H  G  L  L  A  F  I  L  R  S  F  *  I  F  V  G  K   : V  W  W  D  *  I  L  I  S  W  C  *  I  *  Q  S  T  R  L  I  S  S  T  M  L  P  C  S  S  V  V  L  F  K  G  N  I  I  I  D  M  A  K  M  R :   *  Y  L  *  L  P  M  M  W  L  S  L  L  M  L  F  F  *  Q  P  L  P  C  F  R  S  L  S  M  I :   V  E  I  R  R  Y  R  K  L  L  *  Q  L  F  L  L  L  G  *  V  L  Q  F  V  C  L  W  L  S  L  S  I  P  G  Y  G  *  C  P  V  S   : T  D  C  R  L  L  *  Q  *  P  S  T  F  P  R :   L  L  *  </second_frame>
            <third_frame>   H  P  R  G  S  V  I  E  Q  Y  K  H  Q  E  :  L  D  T  K  I  G  I  L  R  F  D  F  C  L  Q  S  S  L  L  I  N  G  F  L  E  F  R  S  T  G  S  V  V  *  C  F  G  M  D  C  V  C  V  M  V  Y  *  L  L  S  S  G  H  F  E  F  S  S  E  K  :  C  G  G  I  E  F  *  F  R  G  V  E  F  D  K  A  L  V  L  S  H  L  Q  C  F  H  V  L  Q  L  C  C  S  K  A  I  S  *  S  I  W  Q  K  *   : D  D  T  C  S  C  Q  *  C  G  F  L  Y  S  C  S  S  F  N  S  L  Y  L  V  S  D  L  Y  L  *   : S  W  K  S  E  G  I  E  N  C  Y  S  N  C  F  C  C  L  V  K  C  C  S  L  C  V  C  G  Y  P  *  A  F  L  A  M  A  S  V  L  F  Q  :  R  I  A  G  C  Y  D  S  N  Q  V  H  S  P   : G  C  Y  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42010" stop="41889"/>
                    <exon start="41814" stop="41682"/>
                    <exon start="41601" stop="41512"/>
                    <exon start="41428" stop="41304"/>
                    <exon start="41154" stop="41112"/>
                    <exon start="40958" stop="40950"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMASWNSVPLEVLYNVLGWIAFVSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYNASMFFSCAVQRQYHNRYGKNEMIPVAANDVAFSTHALLLTAFTLFQISIYDRGNQKVSKIAIAIVSVAWLSVAVCVFVAIPKHSWLWLVSCFNGLQVAMTVTKYIPQAVM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="42054" e_stop="41889"/>
            <exon e_start="41727" e_stop="41512"/>
            <exon e_start="41428" e_stop="41304"/>
            <exon e_start="41154" e_stop="41112"/>
            <exon e_start="40958" e_stop="40849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.687" e_score="0.994"/>
          <exon-intron don_prob="0.938" acc_prob="0.700" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.918" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="42054" e_stop="41889" e_length="166"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.687">
            <gDNA_intron_boundary i_start="41888" i_stop="41728" i_length="161"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41727" e_stop="41512" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.938" acc_prob="0.700">
            <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41428" e_stop="41304" e_length="125"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41154" e_stop="41112" e_length="43"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.918">
            <gDNA_intron_boundary i_start="41111" i_stop="40959" i_length="153"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="40958" e_stop="40849" e_length="110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42054" stop="41889"/>
              <exon start="41727" stop="41512"/>
              <exon start="41428" stop="41304"/>
              <exon start="41154" stop="41112"/>
              <exon start="40958" stop="40849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584429" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGGATTTTACGATTCGATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG : TTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT : CGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA : CGGATTGCAGGTTGCTATGACAGTAACCAAGTACATTCCCCAG : GCTGTTATGAACTTCCGGAGAAAGAGCACCGTTGGTTTTAGTATTGGTAACATTTTGCTGGATTTGTTTGGAGGTTTAACAAATTACGGGCAGATGGCAGTGCAATCTAT</gDNA_template>
            <first_frame> R  D  F  T  I  R  F  L  S  S  I  *  F  V  N  *  W  L  L  G  I  P  F  H  W  K  C  C  I  M  F  W  D  G  L  R  L  C  H  G  L  L  A  F  I  L  R  S  F  *  I  F  V  G  K   : V  V  L  F  K  G  N  I  I  I  D  M  A  K  M  R  F  I  V  R  *  T  H  V  Y  M  Y  G  V  L  F  C  A  N  *  L  I  N  C  L  T  S  D  D  T  C  S  C  Q  *  C  G  F  L  Y  S  C  S  S  F  N  S  L  Y  L  V  S  D  L  Y  L  *   : S  W  K  S  E  G  I  E  N  C  Y  S  N  C  F  C  C  L  V  K  C  C  S  L  C  V  C  G  Y  P  *  A  F  L  A  M  A  S  V  L  F  Q  :  R  I  A  G  C  Y  D  S  N  Q  V  H  S  P   : G  C  Y  E  L  P  E  K  E  H  R  W  F  *  Y  W  *  H  F  A  G  F  V  W  R  F  N  K  L  R  A  D  G  S  A  I  Y </first_frame>
            <second_frame>  G  I  L  R  F  D  F  C  L  Q  S  S  L  L  I  N  G  F  L  E  F  R  S  T  G  S  V  V  *  C  F  G  M  D  C  V  C  V  M  V  Y  *  L  L  S  S  G  H  F  E  F  S  S  E  K  :  L  C  C  S  K  A  I  S  *  S  I  W  Q  K  *  G  S  L  C  D  K  H  M  C  T  C  M  V  F  C  F  V  L  I  N  *  L  I  V  *  L  Q  M  I  P  V  A  A  N  D  V  A  F  S  T  H  A  L  L  L  T  A  F  T  L  F  Q  I  S  I  Y  D  :  R  G  N  Q  K  V  S  K  I  A  I  A  I  V  S  V  A  W  L  S  V  A  V  C  V  F  V  A  I  P  K  H  S  W  L  W  L  V  S  C  F  N :   G  L  Q  V  A  M  T  V  T  K  Y  I  P  Q  :  A  V  M  N  F  R  R  K  S  T  V  G  F  S  I  G  N  I  L  L  D  L  F  G  G  L  T  N  Y  G  Q  M  A  V  Q  S   </second_frame>
            <third_frame>   G  F  Y  D  S  I  F  V  F  N  L  V  C  *  L  M  A  S  W  N  S  V  P  L  E  V  L  Y  N  V  L  G  W  I  A  F  V  S  W  S  I  S  F  Y  P  Q  V  I  L  N  F  R  R  K  S :   C  A  V  Q  R  Q  Y  H  N  R  Y  G  K  N  E  V  H  C  A  I  N  T  C  V  H  V  W  C  F  V  L  C  *  L  I  N  *  L  F  N  F  R  *  Y  L  *  L  P  M  M  W  L  S  L  L  M  L  F  F  *  Q  P  L  P  C  F  R  S  L  S  M  I :   V  E  I  R  R  Y  R  K  L  L  *  Q  L  F  L  L  L  G  *  V  L  Q  F  V  C  L  W  L  S  L  S  I  P  G  Y  G  *  C  P  V  S   : T  D  C  R  L  L  *  Q  *  P  S  T  F  P  R :   L  L  *  T  S  G  E  R  A  P  L  V  L  V  L  V  T  F  C  W  I  C  L  E  V  *  Q  I  T  G  R  W  Q  C  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41607" stop="41512"/>
                    <exon start="41428" stop="41304"/>
                    <exon start="41154" stop="41112"/>
                    <exon start="40958" stop="40851"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQMIPVAANDVAFSTHALLLTAFTLFQISIYDRGNQKVSKIAIAIVSVAWLSVAVCVFVAIPKHSWLWLVSCFNGLQVAMTVTKYIPQAVMNFRRKSTVGFSIGNILLDLFGGLTNYGQMAVQS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42010" stop="41889"/>
                    <exon start="41727" stop="41628"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMASWNSVPLEVLYNVLGWIAFVSWSISFYPQVILNFRRKSCAVQRQYHNRYGKNEVHCAINTCVHVWCFVLC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="46449" PGL_stop="50332"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46449" e_stop="46954"/>
            <exon e_start="47113" e_stop="47287"/>
            <exon e_start="49092" e_stop="49369"/>
            <exon e_start="49541" e_stop="50113"/>
            <exon e_start="50199" e_stop="50332"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.994"/>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="0.993"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="46449" e_stop="46954" e_length="506"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47113" e_stop="47287" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="49092" e_stop="49369" e_length="278"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="49541" e_stop="50113" e_length="573"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="50114" i_stop="50198" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="50199" e_stop="50332" e_length="134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46449" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="50113"/>
              <exon start="50199" stop="50332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575499" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCAAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG : AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG : GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTTATATGCAATCTAAGTCTCTTATTTAAAAACATCTCTTATTTAAAAACATAATTAAAGGAGAGTTGGTTCCCCTCGTTGACCAATATATTTCTTCTATCGTTTTTGGCTCAACGCTCTTCACGGCAGCACTGAACGCAGAGAGGTGGTTGTTTTGTAACATCACAATAGCAACAGGCTATATCACAGTCGTTGTTACACCCT : GTTACTGTGAAGTATTGAGATGGCTCCACAGTCTTAGAGTCTATGAGAAAGGGCAGACGAGTGCTTGTTCCAACAATTGTACTAATAATAATCACCATAGAAACTAGAAAGCTAACTACTACTAACAACTTCAT</gDNA_template>
            <first_frame> S  K  F  N  V  F  S  C  I  H  R  L  L  S  K  L  W  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   K  Q  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  :  S  V  K  *  R  K  L  I  P  F  L  S  G  *  S  Q  N  S  A  S  N  P  L  Y  T  P  V  F  L  V  A  S  K  M  M  V  L  L  V  P  S  E  A  F  S  R  K  Q  M  I  V  N  W  Q  P  L  M  Q  L  L  Q  L  H  I  L  *  S  L  H  L  E  F  S  V  V  D  W  G  L  R  K  L  L  S  *  L  G  L  R  K  I  C  R :   L  T  I  G  V  L  L  K  V  V  M  M  L  I  L  Q  I  *  E  F  R  L  R  L  L  W  C  S  L  D  L  Q  G  V  Y  K  F  W  *  Y  F  S  E  S  Y  L  Q  L  R  S  P  T  R  *  S  Q  Y  V  G  *  V  V  L  S  L  L  L  S  Q  E  R  E  M  I  A  A  N  N  L  L  M  R  N  N  E  H  I  F  L  N  S  N  A  L  L  *  T  W  T  T  H  Q  F  *  *  F  I  D  V  C  C  K  *  R  E  Q  I  K  Y  L  L  H  L  L  Y  A  I  *  V  S  Y  L  K  T  S  L  I  *  K  H  N  *  R  R  V  G  S  P  R  *  P  I  Y  F  F  Y  R  F  W  L  N  A  L  H  G  S  T  E  R  R  E  V  V  V  L  *  H  H  N  S  N  R  L  Y  H  S  R  C  Y  T  L :   L  L  *  S  I  E  M  A  P  Q  S  *  S  L  *  E  R  A  D  E  C  L  F  Q  Q  L  Y  *  *  *  S  P  *  K  L  E  S  *  L  L  L  T  T  S  </first_frame>
            <second_frame>  A  N  S  T  S  S  A  A  S  I  V  F  S  P  S  Y  G  G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : G  S  R  W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  * :   A  S  S  R  E  N  *  S  P  S  *  V  G  R  V  R  I  R  L  Q  T  H  C  T  H  Q  F  F  W  W  Q  A  R  *  W  S  C  *  C  H  R  K  R  S  Q  E  N  R  *  L  *  I  G  N  H  *  C  N  C  F  S  C  T  F  F  S  H  C  T  W  N  F  P  W  *  I  G  D  *  G  S  Y  *  V  N  *  A  *  G  R  F  A   : G  *  Q  L  G  S  C  *  R  W  S  *  C  *  Y  C  R  F  K  S  S  D  C  V  C  C  G  V  P  W  T  Y  K  E  C  I  N  F  G  N  I  L  V  S  L  T  F  S  *  G  H  Q  R  G  E  V  N  M  L  G  K  L  Y  *  A  Y  C  F  H  K  N  G  R  *  L  L  Q  I  T  C  *  *  G  I  M  N  I  F  F  *  I  R  M  H  F  F  E  L  G  L  P  I  N  F  D  S  L  L  M  Y  V  V  N  E  E  S  K  S  S  I  F  Y  I  S  Y  M  Q  S  K  S  L  I  *  K  H  L  L  F  K  N  I  I  K  G  E  L  V  P  L  V  D  Q  Y  I  S  S  I  V  F  G  S  T  L  F  T  A  A  L  N  A  E  R  W  L  F  C  N  I  T  I  A  T  G  Y  I  T  V  V  V  T  P   : C  Y  C  E  V  L  R  W  L  H  S  L  R  V  Y  E  K  G  Q  T  S  A  C  S  N  N  C  T  N  N  N  H  H  R  N  *  K  A  N  Y  Y  *  Q  L  H </second_frame>
            <third_frame>   Q  I  Q  R  L  Q  L  H  P  S  S  S  L  Q  A  M  A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  E  A  D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L   : E  R  Q  V  E  K  I  D  P  L  L  K  W  V  E  S  E  F  G  F  K  P  T  V  H  T  S  F  F  G  G  K  Q  D  D  G  L  V  S  A  I  G  S  V  L  K  K  T  D  D  C  E  L  A  T  I  D  A  I  A  S  A  A  H  S  L  V  I  A  L  G  I  F  R  G  R  L  G  I  E  E  A  I  E  L  I  R  L  E  E  D  L  Q  :  V  D  N  W  G  L  V  E  G  G  H  D  V  D  I  A  D  L  R  V  Q  I  A  S  A  V  V  F  L  G  L  T  R  S  V  *  I  L  V  I  F  *  *  V  L  P  S  V  E  V  T  N  E  V  K  S  I  C  W  V  S  C  I  K  L  I  A  F  T  R  T  G  D  D  C  C  K  *  P  A  D  E  E  *  *  T  Y  F  S  E  F  E  C  T  S  L  N  L  D  Y  P  S  I  L  I  V  Y  *  C  M  L  *  M  K  R  A  N  Q  V  S  F  T  S  L  I  C  N  L  S  L  L  F  K  N  I  S  Y  L  K  T  *  L  K  E  S  W  F  P  S  L  T  N  I  F  L  L  S  F  L  A  Q  R  S  S  R  Q  H  *  T  Q  R  G  G  C  F  V  T  S  Q  *  Q  Q  A  I  S  Q  S  L  L  H  P  :  V  T  V  K  Y  *  D  G  S  T  V  L  E  S  M  R  K  G  R  R  V  L  V  P  T  I  V  L  I  I  I  T  I  E  T  R  K  L  T  T  T  N  N  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46451" stop="46954"/>
                    <exon start="47113" stop="47287"/>
                    <exon start="49092" stop="49369"/>
                    <exon start="49541" stop="49648"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1062</number_coding_nucleotides>
                  <number_encoded_amino_acids>354</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIQRLQLHPSSSLQAMAAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQEADGIRPFTMPLMKLSCTALERVPLTRHKIIEYLMKKFPQDLVFCRAPGDNDLTSGVLERQVEKIDPLLKWVESEFGFKPTVHTSFFGGKQDDGLVSAIGSVLKKTDDCELATIDAIASAAHSLVIALGIFRGRLGIEEAIELIRLEEDLQVDNWGLVEGGHDVDIADLRVQIASAVVFLGLTRSV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49939" stop="50113"/>
                    <exon start="50199" stop="50305"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHLLFKNIIKGELVPLVDQYISSIVFGSTLFTAALNAERWLFCNITIATGYITVVVTPCYCEVLRWLHSLRVYEKGQTSACSNNCTNNNHHRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="54397" PGL_stop="50862"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54397" e_stop="53334"/>
            <exon e_start="51221" e_stop="50862"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54397" e_stop="53334" e_length="1064"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="51221" e_stop="50862" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54397" stop="53334"/>
              <exon start="51221" stop="50862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54044" stop="53334"/>
              <exon start="51221" stop="51020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG : ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGC</gDNA_template>
            <first_frame> K  *  H  N  T  E  D  I  I  Y  V  F  Q  *  K  R  C  *  K  K  R  K  A  I  D  P  G  R  E  P  T  T  L  L  R  N  N  L  T  I  T  N  P  T  R  H  Q  Y  S  T  Q  I  P  T  H  S  R  Q  S  L  L  V  D  E  T  I  N  T  T  S  N  I  F  H  M  Y  R  T  T  P  S  T  S  T  H  S  Q  T  Q  N  H  P  M  S  V  S  F  T  C  L  F  P  S  F  N  T  N  I  F  L  *  Y  K  I  P  L  Y  W  L  S  L  V  A  T  Y  P  I  T  P  F  L  V  F  I  H  S  S  M  A  T  S  L  I  R  R  A  I  S  R  V  Q  S  S  A  P  A  A  R  L  L  V  A  R  A  H  A  S  D  S  Q  A  Q  K  V  E  S  K  P  N  L  K  S  F  Q  I  Y  R  W  T  P  D  N  P  G  K  P  E  L  K  E  Y  K  I  D  L  K  E  C  G  P  M  V  L  D  A  L  I  K  I  K  N  E  I  D  P  T  L  T  F  R  R  S  C  R  E  G  I  C  G  S  C  A  M  N  I  D  G  C  N  G  L  A  C  L  T  K  I  S  S  D  S  E  S  T  I  T  P  L  P  H  M  F  V  I  K  D  L  V  V  D  M  T  N  F  Y  N  Q  Y  K  S  I  E  P  W  L  K  R  K  T  P  A  P  T  P  G  K  E  I  P  Q  S  K  S  D  R  A  K  L  D  G  M  Y  E  C  I  L  C  A  C  C  S  T  S  C  P  S  Y  W  W  N  P  E  S  Y  L  G  P  A  A  L  L  H  A  N  R :   W  I  M  D  S  R  D  E  Y  T  Q  E  R  L  D  A  V  N  D  E  F  K  L  Y  R  C  H  T  I  L  N  C  S  R  A  C  P  K  G  L  N  P  G  K  H  I  Q  N  I  K  K  L  E  M  A  P  *  A  C  S  V  V  C  S  N  L  F  C  *  D  *  F  *  R  T  S  R  R  L  C  P  K  I  M  Y  A  Q  I  V  I  Y  S  L  R  S  F  *  Y  L  N  L  R  *  K  V  H  L  S  E  I  *  Y  S  I  N  F  K  Y  I   </first_frame>
            <second_frame>  N  N  T  T  P  K  I  L  F  M  Y  F  S  K  N  D  A  E  K  S  E  K  R  L  I  Q  D  A  S  Q  P  R  Y  L  E  I  I  *  R  L  Q  I  R  H  V  I  N  I  R  H  R  S  Q  L  I  H  G  K  A  Y  *  S  T  K  Q  *  I  Q  P  Q  I  F  F  T  C  T  E  L  P  L  P  H  P  P  I  L  K  H  K  T  T  Q  C  R  F  L  L  H  A  Y  F  R  H  L  I  P  I  F  F  F  N  I  K  S  P  S  I  G  F  L  *  *  Q  P  I  Q  S  L  R  F  W  Y  S  F  I  L  Q  W  R  L  V  *  S  D  E  R  F  L  G  F  S  H  Q  H  R  R  R  G  Y  S  S  P  E  L  T  L  P  T  P  K  H  R  R  *  N  L  S  L  I  S  N  H  F  K  F  T  D  G  L  Q  T  T  Q  G  N  L  S  S  K  N  T  K  S  I  *  R  N  A  D  L  W  F  *  M  R  *  S  K  S  R  M  K  L  T  L  H  L  P  S  G  D  P  V  E  K  G  S  V  V  H  V  L  *  T  S  T  D  V  M  D  S  L  V  *  P  R  S  R  R  I  L  N  R  R  L  R  R  C  H  I  C  L  S  L  R  I  W  W  W  I  *  L  I  S  I  I  S  T  S  L  L  S  L  G  L  R  G  R  H  L  H  Q  R  L  G  R  R  Y  H  R  A  R  A  I  G  L  S  W  M  G  C  T  N  V  F  Y  V  L  A  V  A  H  H  V  L  A  T  G  G  I  L  S  L  I  L  V  P  L  H  S  S  M  P  T   : D  G  S  W  I  A  V  M  N  I  L  R  S  A  W  M  Q  L  M  T  N  S  S  F  I  A  A  I  L  F  *  I  V  L  V  L  A  Q  R  D  *  I  P  G  S  I  F  R  T  S  R  S  W  R  W  H  L  E  P  A  V  *  C  V  P  I  F  S  A  K  I  D  F  E  G  L  V  G  G  C  V  P  K  *  C  M  H  R  L  *  F  T  L  *  D  L  F  N  T  *  I  *  D  E  R  C  I  S  L  K  Y  N  T  V  S  I  S  S  T  L  </second_frame>
            <third_frame>   I  T  Q  H  R  R  Y  Y  L  C  I  S  V  K  T  M  L  K  K  A  K  S  D  *  S  R  T  R  A  N  H  V  T  *  K  *  S  N  D  Y  K  S  D  T  S  S  I  F  D  T  D  P  N  S  F  T  A  K  L  I  S  R  R  N  N  K  Y  N  L  K  Y  F  S  H  V  P  N  Y  P  F  H  I  H  P  F  S  N  T  K  P  P  N  V  G  F  F  Y  M  P  I  S  V  I  *  Y  Q  Y  F  S  L  I  *  N  P  P  L  L  A  F  S  S  S  N  L  S  N  H  S  V  F  G  I  H  S  F  F  N  G  D  *  F  N  P  T  S  D  F  *  G  S  V  I  S  T  G  G  E  A  T  R  R  Q  S  S  R  F  R  L  P  S  T  E  G  R  I  *  A  *  S  Q  I  I  S  N  L  P  M  D  S  R  Q  P  R  E  T  *  A  Q  R  I  Q  N  R  S  E  G  M  R  T  Y  G  F  R  C  A  N  Q  N  Q  E  *  N  *  P  Y  T  Y  L  Q  E  I  L  *  R  R  D  L  W  F  M  C  Y  E  H  R  R  M  *  W  T  R  L  F  D  Q  D  L  V  G  F  *  I  D  D  Y  A  V  A  T  Y  V  C  H  *  G  S  G  G  G  Y  D  *  F  L  *  S  V  Q  V  Y  *  A  L  A  *  E  E  D  T  C  T  N  A  W  E  G  D  T  T  E  Q  E  R  *  G  *  V  G  W  D  V  R  M  Y  S  M  C  L  L  *  H  I  M  S  *  L  L  V  E  S  *  V  L  S  W  S  R  C  T  P  P  C  Q  P  :  M  D  H  G  *  P  *  *  I  Y  S  G  A  P  G  C  S  *  *  R  I  Q  A  L  S  L  P  Y  Y  S  E  L  F  S  C  L  P  K  G  I  K  S  R  E  A  Y  S  E  H  Q  E  A  G  D  G  T  L  S  L  Q  C  S  V  F  Q  S  F  L  L  R  L  I  L  K  D  *  *  E  V  V  S  Q  N  N  V  C  T  D  C  N  L  L  S  E  I  F  L  I  L  E  F  E  M  K  G  A  S  L  *  N  I  I  Q  Y  Q  F  Q  V  H  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54064" stop="53334"/>
                    <exon start="51221" stop="51050"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YKIPLYWLSLVATYPITPFLVFIHSSMATSLIRRAISRVQSSAPAARLLVARAHASDSQAQKVESKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTQERLDAVNDEFKLYRCHTILNCSRACPKGLNPGKHIQNIKKLEMAP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54343" stop="54065"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKRKAIDPGREPTTLLRNNLTITNPTRHQYSTQIPTHSRQSLLVDETINTTSNIFHMYRTTPSTSTHSQTQNHPMSVSFTCLFPSFNTNIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="57092" PGL_stop="55528"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57092" e_stop="57032"/>
            <exon e_start="56521" e_stop="56330"/>
            <exon e_start="55789" e_stop="55528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57092" e_stop="57032" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.969">
            <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56521" e_stop="56330" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="55789" e_stop="55528" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57092" stop="57032"/>
              <exon start="56521" stop="56330"/>
              <exon start="55789" stop="55528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576793" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTCTCTTCTTCTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC : CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG : AAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAAGC</gDNA_template>
            <first_frame> F  S  L  L  L  P  F  I  N  *  L  H  Q  K  Y  H  I  H  E  F   : P  R  E  R  S  A  I  A  E  I  R  G  V  G  C  K  *  S  S  L  C  R  W  I  H  C  H  I  C  *  G  *  R  *  Q  E  G  *  *  Q  C  S  T  N  T  N  A  Q  K  *  L  C  I  W  T  T  E  P  L  S  A  R  N  Q   : E  K  K  V  L  L  F  L  K  A  G  C  F  G  G  C  E  L  *  D  F  K  A  I  G  N  C  S  S  S  L  P  S  G  R  M  S  A  A  P  S  V  C  I  L  L  Y  *  L  F  V  A  Y  K  V  F  F  N  S  L  Y  S  L  L  P  N  I  C  M  Y  V  F  R  G  I  V  D  Q  H  T  L  M  Y  S  T  *  K   </first_frame>
            <second_frame>  S  L  F  F  F  L  S  S  I  N  Y  T  K  N  I  I  F  M  N  S  :  Q  E  K  G  R  P  L  P  K  F  G  E  W  D  V  N  N  P  A  S  A  D  G  F  T  V  I  F  A  K  A  R  D  D  K  K  A  N  S  S  A  A  P  T  Q  T  P  R  N  D  Y  A  Y  G  Q  P  N  P  Y  Q  Q  E  T  R  :  K  R  R  F  C  C  F  *  K  Q  D  V  S  V  A  V  N  Y  E  T  L  R  P  S  G  I  A  V  Q  V  C  Q  V  G  E  *  V  L  H  L  L  F  V  F  Y  S  I  D  Y  L  L  H  I  R  F  S  S  T  L  S  T  L  Y  S  P  I  Y  V  C  M  Y  S  G  E  S  S  T  N  T  R  *  C  I  L  L  E  K  </second_frame>
            <third_frame>   L  S  S  S  S  F  H  Q  L  I  T  P  K  I  S  Y  S  *  I  P :   K  R  K  V  G  H  C  R  N  S  G  S  G  M  *  I  I  Q  P  L  Q  M  D  S  L  S  Y  L  L  R  L  E  M  T  R  R  L  I  A  V  Q  H  Q  H  K  R  P  E  M  T  M  H  M  D  N  R  T  L  I  S  K  K  P  G :   K  E  G  F  A  V  S  E  S  R  M  F  R  W  L  *  I  M  R  L  *  G  H  R  E  L  Q  F  K  S  A  K  W  E  N  E  C  C  T  F  C  L  Y  F  T  L  L  I  I  C  C  I  *  G  F  L  Q  L  S  L  L  S  T  P  Q  Y  M  Y  V  C  I  Q  G  N  R  R  P  T  H  A  N  V  F  Y  L  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57091" stop="57032"/>
                    <exon start="56521" stop="56330"/>
                    <exon start="55789" stop="55766"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFFFLSSINYTKNIIFMNSQEKGRPLPKFGEWDVNNPASADGFTVIFAKARDDKKANSSAAPTQTPRNDYAYGQPNPYQQETRKRRFCCF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56475" stop="56330"/>
                    <exon start="55789" stop="55741"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIQPLQMDSLSYLLRLEMTRRLIAVQHQHKRPEMTMHMDNRTLISKKPGKEGFAVSESRMFRWL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="60969" PGL_stop="60422"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60969" e_stop="60882"/>
            <exon e_start="60804" e_stop="60422"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.961" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60969" e_stop="60882" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.961" acc_prob="0.986">
            <gDNA_intron_boundary i_start="60881" i_stop="60805" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="60804" e_stop="60422" e_length="383"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60969" stop="60882"/>
              <exon start="60804" stop="60422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598787" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGGTTGGACAGTTCCTCCCCAAAATGACACAATTTTTTACAACAACTGGGCTTCCGCTATGAGGTTCAAAATTGGCGACACTATCC : GTTTCAAGTACAAGAAGGATTCAGTGATGGAGGTGACGGATAAAGATTACAAGAAATGCAACTCAACACAGCCTCATTTCTTTTCCAACAGTGGGAACACCATGTTCACGTTGGAGCATTCTGGCTATTATTATTTCATAAGTGGAGCAGCAGGACACTGTGAGCGAGGACAACGAATGATACTAAGGGTTATGGTCCAGGATCTCATACCTACTGCTTCTCATGCTCCATTCTCATTCCCAATCTTTCAACAACTTCAACTTCTCTTCTTTCTTTTCCTTTCACTTGTTTTATTTTAACTTCTTACTGCGACGTTGTTTTTCTTCTGCATTGGCATACTTTGTTTATTTTTAATCTTCTATGCGTTTCAATTTATTTATCAC</gDNA_template>
            <first_frame> T  G  W  T  V  P  P  Q  N  D  T  I  F  Y  N  N  W  A  S  A  M  R  F  K  I  G  D  T  I   : R  F  K  Y  K  K  D  S  V  M  E  V  T  D  K  D  Y  K  K  C  N  S  T  Q  P  H  F  F  S  N  S  G  N  T  M  F  T  L  E  H  S  G  Y  Y  Y  F  I  S  G  A  A  G  H  C  E  R  G  Q  R  M  I  L  R  V  M  V  Q  D  L  I  P  T  A  S  H  A  P  F  S  F  P  I  F  Q  Q  L  Q  L  L  F  F  L  F  L  S  L  V  L  F  *  L  L  T  A  T  L  F  F  F  C  I  G  I  L  C  L  F  L  I  F  Y  A  F  Q  F  I  Y  H </first_frame>
            <second_frame>  L  V  G  Q  F  L  P  K  M  T  Q  F  F  T  T  T  G  L  P  L  *  G  S  K  L  A  T  L  S  :  V  S  S  T  R  R  I  Q  *  W  R  *  R  I  K  I  T  R  N  A  T  Q  H  S  L  I  S  F  P  T  V  G  T  P  C  S  R  W  S  I  L  A  I  I  I  S  *  V  E  Q  Q  D  T  V  S  E  D  N  E  *  Y  *  G  L  W  S  R  I  S  Y  L  L  L  L  M  L  H  S  H  S  Q  S  F  N  N  F  N  F  S  S  F  F  S  F  H  L  F  Y  F  N  F  L  L  R  R  C  F  S  S  A  L  A  Y  F  V  Y  F  *  S  S  M  R  F  N  L  F  I   </second_frame>
            <third_frame>   W  L  D  S  S  S  P  K  *  H  N  F  L  Q  Q  L  G  F  R  Y  E  V  Q  N  W  R  H  Y  P :   F  Q  V  Q  E  G  F  S  D  G  G  D  G  *  R  L  Q  E  M  Q  L  N  T  A  S  F  L  F  Q  Q  W  E  H  H  V  H  V  G  A  F  W  L  L  L  F  H  K  W  S  S  R  T  L  *  A  R  T  T  N  D  T  K  G  Y  G  P  G  S  H  T  Y  C  F  S  C  S  I  L  I  P  N  L  S  T  T  S  T  S  L  L  S  F  P  F  T  C  F  I  L  T  S  Y  C  D  V  V  F  L  L  H  W  H  T  L  F  I  F  N  L  L  C  V  S  I  Y  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="60882"/>
                    <exon start="60804" stop="60506"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGWTVPPQNDTIFYNNWASAMRFKIGDTIRFKYKKDSVMEVTDKDYKKCNSTQPHFFSNSGNTMFTLEHSGYYYFISGAAGHCERGQRMILRVMVQDLIPTASHAPFSFPIFQQLQLLFFLFLSLVLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="62368" PGL_stop="64948"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62368" e_stop="63152"/>
            <exon e_start="63710" e_stop="63779"/>
            <exon e_start="64417" e_stop="64948"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62368" e_stop="63152" e_length="785"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63710" e_stop="63779" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.979">
            <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="64417" e_stop="64948" e_length="532"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62368" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC : ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG : GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAGAATGAATTTTCTGTATGGTGTTT</gDNA_template>
            <first_frame> L  P  A  V  L  C  P  Y  K  *  I  N  R  L  L  Q  T  H  R  V  *  H  S  K  I  Q  S  L  D  L  Y  A  S  L  F  I  Y  K  I  I  V  F  S  C  F  C  H  S  N  M  E  S  C  I  Y  H  Q  L  K  S  Q  P  V  W  L  L  L  L  L  S  L  G  F  L  K  V  L  C  F  S  V  I  F  L  K  W  V  Y  V  N  F  L  R  P  A  K  N  L  K  K  Y  G  S  W  A  L  V  T  G  P  T  D  G  I  G  K  G  F  A  F  E  L  A  R  K  G  L  N  L  V  L  V  G  R  N  P  D  K  L  K  D  V  S  E  S  I  K  A  K  Y  G  Q  T  Q  I  K  T  V  V  V  D  F  S  G  D  L  D  E  G  V  K  K  I  K  E  T  I  E  G  L  D  I  G  V  L  I  N  N  V  G  V  S  Y  P  Y  A  R  F  F  H  E  V  D  D  K  L  L  A  D  L  I  K  V  N  V  E  G  T  T  K  V  T  Q  A  V  L  P  G  M  I  Q  R  K  R  G  A  I  V  N  I  G  S  G  A  A  I  V  I  P  S  D  P  L  Y  A  V  Y  A  A  T  K  A :   Y  I  D  Q  F  S  R  C  L  Y  V  E  Y  K  K  S  G  I  D  V  Q  C  Q  :  V  P  L  Y  V  A  T  K  M  A  S  I  K  R  S  S  F  F  V  P  S  T  D  G  Y  A  R  A  A  L  R  W  I  G  H  E  P  R  C  T  P  Y  W  P  H  S  L  L  W  G  V  L  C  S  L  P  E  S  M  V  D  A  W  R  L  N  F  C  I  G  I  R  R  R  G  Q  L  K  D  S  R  K  K  E  *  K  A  S  A  L  P  H  S  I  S  *  K  F  D  *  *  T  I  N  F  R  L  Y  F  Q  L  G  N  A  S  Y  C  N  A  T  R  S  L  I  L  F  L  L  I  K  Q  G  L  V  L  F  L  Q  F  *  L  *  A  D  R  I  K  S  V  L  K  E  I  P  T  L  K  I  L  F  V  F  I  L  *  V  *  C  C  R  M  N  F  L  Y  G  V  </first_frame>
            <second_frame>  S  Q  L  C  C  A  H  T  S  E  L  I  D  C  S  K  P  I  A  C  N  T  P  R  F  N  L  *  I  Y  T  L  L  Y  L  Y  I  K  L  S  C  S  L  V  S  A  T  Q  T  W  S  L  A  S  T  I  S  S  N  P  S  L  Y  G  F  F  C  F  F  L  *  V  S  *  K  S  C  A  F  Q  S  S  F  S  N  G  S  M  S  I  S  S  D  L  L  R  I  L  R  N  M  G  H  G  H  L  L  L  D  L  Q  M  V  L  G  R  A  L  L  L  N  *  L  E  K  G  L  I  *  F  L  W  V  V  T  L  I  N  L  R  M  F  L  N  R  L  K  L  N  M  D  R  P  R  S  K  Q  S  S  L  I  S  L  V  I  W  M  K  G  L  R  R  L  R  R  Q  L  K  D  W  I  L  G  F  *  L  I  M  L  G  F  R  I  L  M  L  D  F  S  M  K  W  M  I  S  C  W  Q  I  *  L  K  L  M  W  K  G  L  Q  R  L  L  K  L  F  C  L  V  *  F  R  G  K  E  E  Q  L  L  I  L  V  L  V  R  L  L  L  S  P  L  I  L  C  M  L  F  M  P  Q  L  K   : H  T  L  T  S  S  P  D  A  S  M  *  S  T  R  R  V  G  L  M  C  N  A  R :   C  R  Y  M  W  Q  Q  K  W  R  R  S  K  D  L  H  F  L  F  P  R  L  M  V  M  L  G  L  P  C  D  G  L  V  M  S  Q  G  A  H  L  T  G  P  I  L  F  C  G  V  F  Y  V  H  C  Q  S  R  W  L  M  L  G  V  *  T  S  A  L  E  F  E  G  E  G  S  *  R  I  P  G  R  K  N  R  K  H  L  L  Y  L  I  P  Y  L  K  S  L  I  S  R  Q  L  I  S  V  S  I  S  N  W  V  M  L  V  T  V  M  Q  L  E  A  *  F  C  S  Y  S  L  N  K  A  *  C  Y  F  C  N  F  S  C  R  L  I  E  S  R  A  F  *  K  K  F  Q  L  L  R  Y  C  L  Y  L  F  F  E  F  D  V  A  E  *  I  F  C  M  V  F </second_frame>
            <third_frame>   P  S  C  A  V  P  I  Q  V  N  *  *  T  A  P  N  P  S  R  V  T  L  Q  D  S  I  F  R  S  I  R  F  F  I  Y  I  *  N  Y  R  V  L  L  F  L  P  L  K  H  G  V  L  H  L  P  S  A  Q  I  P  A  C  M  A  S  F  A  S  F  F  R  F  L  E  S  L  V  L  F  S  H  L  S  Q  M  G  L  C  Q  F  P  Q  T  C  *  E  S  *  E  I  W  V  M  G  T  C  Y  W  T  Y  R  W  Y  W  E  G  L  C  F  *  I  S  S  K  R  A  *  S  S  S  C  G  S  *  P  *  *  T  *  G  C  F  *  I  D  *  S  *  I  W  T  D  P  D  Q  N  S  R  R  *  F  L  W  *  F  G  *  R  G  *  E  D  *  G  D  N  *  R  I  G  Y  W  G  F  D  *  *  C  W  G  F  V  S  L  C  *  I  F  P  *  S  G  *  *  A  V  G  R  F  D  *  S  *  C  G  R  D  Y  K  G  Y  S  S  C  F  A  W  Y  D  S  E  E  K  R  S  N  C  *  Y  W  F  W  C  G  Y  C  Y  P  L  *  S  S  V  C  C  L  C  R  N  *  S  :  I  H  *  P  V  L  Q  M  P  L  C  R  V  Q  E  E  W  D  *  C  A  M  P   : G  A  V  I  C  G  N  K  N  G  V  D  Q  K  I  F  I  F  C  S  L  D  *  W  L  C  S  G  C  P  A  M  D  W  S  *  A  K  V  H  T  L  L  A  P  F  S  S  V  G  C  S  M  F  I  A  R  V  D  G  *  C  L  A  S  E  L  L  H  W  N  S  K  E  R  A  A  E  G  F  Q  E  E  R  I  E  S  I  C  F  T  S  F  H  I  L  K  V  *  L  V  D  N  *  F  P  S  L  F  P  I  G  *  C  *  L  L  *  C  N  *  K  L  D  S  V  L  T  H  *  T  R  P  S  V  I  F  A  I  L  V  V  G  *  S  N  Q  E  R  S  K  R  N  S  N  S  *  D  T  V  C  I  Y  S  L  S  L  M  L  Q  N  E  F  S  V  W  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62431" stop="63152"/>
                    <exon start="63710" stop="63779"/>
                    <exon start="64417" stop="64671"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSKIQSLDLYASLFIYKIIVFSCFCHSNMESCIYHQLKSQPVWLLLLLSLGFLKVLCFSVIFLKWVYVNFLRPAKNLKKYGSWALVTGPTDGIGKGFAFELARKGLNLVLVGRNPDKLKDVSESIKAKYGQTQIKTVVVDFSGDLDEGVKKIKETIEGLDIGVLINNVGVSYPYARFFHEVDDKLLADLIKVNVEGTTKVTQAVLPGMIQRKRGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDGYARAALRWIGHEPRCTPYWPHSLLWGVLCSLPESMVDAWRLNFCIGIRRRGQLKDSRKKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="69374" PGL_stop="65140"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69374" e_stop="68813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="69374" e_stop="68813" e_length="562"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69374" stop="68813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587563" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATTTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</gDNA_template>
            <first_frame> L  L  F  *  Y  P  Q  N  P  H  P  H  L  H  L  C  F  H  F  T  Y  *  L  R  K  D  S  V  L  F  S  K  I  R  D  F  L  V  A  F  S  K  I  N  *  F  V  K  R  G  C  T  L  L  V  I  V  *  R  S  S  G  S  *  F  S  E  A  *  E  W  N  L  Q  G  G  F  L  I  R  C  G  T  S  F  V  S  Y  L  T  S  L  A  C  L  F  W  V  S  *  K  V  L  F  F  F  F  N  Y  T  H  V  T  V  V  S  S  F  L  F  F  N  *  H  T  F  F  I  F  L  V  F  H  L  C  C  F  K  M  I  L  L  E  L  R  N  N  L  S  I  S  Q  G  R  G  K  V  Y  T  Y  Q  I  P  L  T  R  *  V  V  V  V  L  L  F  Q  S  *  S  *  K  *  L  V  C  A  T  Y  </first_frame>
            <second_frame>  F  C  S  N  I  L  K  T  H  I  H  I  F  I  Y  V  S  I  L  R  T  D  Y  G  K  T  Q  F  F  S  A  K  S  E  I  F  W  L  H  F  P  R  L  I  D  L  *  K  G  V  V  P  C  *  *  L  C  K  D  R  V  V  L  D  L  A  K  H  K  N  G  T  S  K  G  G  F  *  F  G  V  E  L  H  S  F  L  T  L  L  H  *  P  A  Y  F  G  C  L  E  R  F  F  S  S  S  S  I  T  L  M  S  L  L  S  L  L  S  F  F  S  I  S  I  L  F  S  F  F  L  F  F  I  S  V  A  L  K  *  F  Y  L  S  *  E  T  T  S  L  S  P  K  V  G  V  R  S  I  L  T  R  S  H  S  P  G  K  L  L  L  F  Y  C  S  K  A  S  H  R  N  D  W  F  V  L  L  T </second_frame>
            <third_frame>   F  V  L  I  S  S  K  P  T  S  T  S  S  S  M  F  P  F  Y  V  L  T  T  E  R  L  S  S  F  Q  Q  N  P  R  F  F  G  C  I  F  Q  D  *  L  I  C  E  K  G  L  Y  L  V  S  D  C  V  K  I  E  W  F  L  I  *  R  S  I  R  M  E  P  P  R  G  V  F  D  S  V  W  N  F  I  R  F  L  P  Y  F  I  S  L  L  I  L  G  V  L  K  G  S  F  L  L  L  Q  L  H  S  C  H  C  C  L  F  F  P  F  F  Q  L  A  Y  F  F  H  F  S  C  F  S  S  L  L  L  *  N  D  F  T  *  A  E  K  Q  P  L  Y  L  P  R  *  G  *  G  L  Y  L  P  D  P  T  H  Q  V  S  C  C  C  F  T  V  P  K  L  V  I  E  M  T  G  L  C  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69177" stop="68962"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSIRMEPPRGVFDSVWNFIRFLPYFISLLILGVLKGSFLLLQLHSCHCCLFFPFFQLAYFFHFSCFSSLLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68332" e_stop="67496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="68332" e_stop="67496" e_length="837"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68332" stop="67496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587562" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</gDNA_template>
            <first_frame> *  D  G  T  W  D  T  V  K  G  S  L  T  I  V  R  D  L  K  D  V  L  Y  H  S  Y  F  S  I  M  D  D  F  R  L  Q  E  P  P  D  G  K  C  Y  E  I  R  F  C  *  I  V  Y  L  K  V  L  F  P  V  F  V  Q  F  E  I  *  *  F  S  L  *  F  H  T  L  Y  L  S  L  S  E  S  L  R  *  L  V  S  M  S  I  Q  L  M  N  C  I  F  Y  W  K  Y  T  T  K  Q  L  A  V  V  C  *  L  H  A  L  L  L  H  L  C  Q  L  K  P  T  P  Q  S  F  L  D  N  S  Y  H  M  *  *  Q  G  R  D  G  G  V  I  L  A  T  E  A  C  T  T  D  E  R  I  S  R  M  M  V  N  L  K  E  K  H  E  R  R  I  *  M  S  P  I  F  L  E  Y  F  I  Y  F  N  F  R  F  R  R  I  F  K  T  P  A  F  P  V  G  L  I  Y  F  C  I  S  S  F  Q  K  Y  I  S  R  *  L  N  G  K  L  Y  K  K  K  Y  K  K  Y  I  L  T  V  H  S  I  F  T  S  S  T  Y  I  L  L  I  T  L  Y  T  V  K  I  F  L  N  I  S  E  A  S  S  *  F  M  Q  N  L  K  T  L  I  *  F  L </first_frame>
            <second_frame>  R  M  G  P  G  T  Q  *  K  E  A  *  P  L  L  G  I  *  R  M  S  Y  T  I  P  I  S  Q  S  W  M  I  S  D  F  K  N  L  L  M  E  N  A  T  R  S  G  F  V  E  S  S  I  S  K  F  F  F  P  S  L  S  N  L  K  F  D  S  F  L  Y  S  S  I  P  Y  I  F  H  Y  Q  R  V  S  D  N  *  L  V  C  Q  F  S  *  *  I  V  S  F  I  G  N  I  Q  Q  S  S  L  P  L  F  A  N  Y  M  L  Y  F  Y  I  S  V  S  *  N  L  H  L  K  A  F  L  T  T  P  T  I  C  D  D  R  V  E  M  V  V  *  F  *  L  Q  K  L  A  R  Q  M  R  E  Y  L  V  *  W  L  T  *  K  K  N  M  N  G  E  S  E  C  P  L  F  S  *  N  I  S  S  I  L  T  S  V  S  E  E  F  S  K  L  Q  L  S  L  *  V  *  S  I  F  V  L  V  H  S  K  N  I  Y  P  G  D  *  M  A  N  Y  T  K  R  N  I  R  S  I  Y  L  L  F  I  A  S  L  H  L  P  H  I  F  C  L  *  H  F  T  L  S  R  F  F  *  I  S  V  K  R  Q  V  S  S  C  K  I  L  K  H  L  F  S  F   </second_frame>
            <third_frame>   G  W  D  L  G  H  S  E  R  K  L  D  H  C  *  G  F  E  G  C  L  I  P  F  L  F  L  N  H  G  *  F  P  T  S  R  T  S  *  W  K  M  L  R  D  Q  V  L  L  N  R  L  S  Q  S  S  F  S  R  L  C  P  I  *  N  L  I  V  F  S  I  V  P  Y  L  I  S  F  I  I  R  E  S  Q  I  T  S  *  Y  V  N  S  V  N  E  L  Y  L  L  L  E  I  Y  N  K  A  A  C  R  C  L  L  I  T  C  S  T  F  T  S  L  S  V  E  T  Y  T  S  K  L  S  *  Q  L  L  P  Y  V  M  T  G  *  R  W  W  C  N  F  S  Y  R  S  L  H  D  R  *  E  N  I  S  Y  D  G  *  P  K  R  K  T  *  T  E  N  L  N  V  P  Y  F  P  R  I  F  H  L  F  *  L  P  F  Q  K  N  F  Q  N  S  S  F  P  C  R  F  D  L  F  L  Y  *  F  I  P  K  I  Y  I  P  V  T  K  W  Q  T  I  Q  K  E  I  *  E  V  Y  T  Y  C  S  *  H  L  Y  I  F  H  I  Y  F  A  Y  N  T  L  H  C  Q  D  F  S  E  Y  Q  *  S  V  K  L  V  H  A  K  S  *  N  T  Y  L  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68277" stop="68071"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMSYTIPISQSWMISDFKNLLMENATRSGFVESSISKFFFPSLSNLKFDSFLYSSIPYIFHYQRVSDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="69317" e_stop="69072"/>
            <exon e_start="68804" e_stop="68696"/>
            <exon e_start="68616" e_stop="68424"/>
            <exon e_start="68329" e_stop="68193"/>
            <exon e_start="67047" e_stop="66759"/>
            <exon e_start="66650" e_stop="66544"/>
            <exon e_start="66435" e_stop="66300"/>
            <exon e_start="66205" e_stop="66007"/>
            <exon e_start="65920" e_stop="65677"/>
            <exon e_start="65591" e_stop="65140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.841" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.859" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.556" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.699" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.757" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69317" e_stop="69072" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.959">
            <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68804" e_stop="68696" e_length="109"/>
          </exon>
          <intron i_serial="2" don_prob="0.841" acc_prob="0.973">
            <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68616" e_stop="68424" e_length="193"/>
          </exon>
          <intron i_serial="3" don_prob="0.924" acc_prob="0.989">
            <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68329" e_stop="68193" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.859" acc_prob="0.990">
            <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67047" e_stop="66759" e_length="289"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.556">
            <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66650" e_stop="66544" e_length="107"/>
          </exon>
          <intron i_serial="6" don_prob="0.887" acc_prob="0.999">
            <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="66435" e_stop="66300" e_length="136"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.699">
            <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="66205" e_stop="66007" e_length="199"/>
          </exon>
          <intron i_serial="8" don_prob="0.802" acc_prob="0.985">
            <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="65920" e_stop="65677" e_length="244"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.757">
            <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="65591" e_stop="65140" e_length="452"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69317" stop="69072"/>
              <exon start="68804" stop="68696"/>
              <exon start="68616" stop="68424"/>
              <exon start="68329" stop="68193"/>
              <exon start="67047" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585135" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAG : GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG : CACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATAT : GATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG : GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG : GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG : GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG : CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA : ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG : GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAA</gDNA_template>
            <first_frame> T  Y  *  L  R  K  D  S  V  L  F  S  K  I  R  D  F  L  V  A  F  S  K  I  N  *  F  V  K  R  G  C  T  L  L  V  I  V  *  R  S  S  G  S  *  F  S  E  A  *  E  W  N  L  Q  G  G  F  L  I  R  C  G  T  S  F  V  S  Y  L  T  S  L  A  C  L  F  W  V  S  *  K  :  V  S  L  C  S  L  S  S  L  L  Y  S  L  S  E  T  V  P  L  F  W  V  F  G  Q  C  T  C  S  I  H  F  T  V  Y  G   : A  Q  S  N  *  V  Q  L  *  N  F  *  *  A  Y  V  P  L  L  F  Y  I  Y  G  P  S  L  E  L  Q  L  A  L  L  A  G  L  L  M  A  S  F  H  Q  C  L  P  L  S  K  Q  W  M  E  G  R  L  M  P  S  I  T  V  Y  M :   M  G  P  G  T  Q  *  K  E  A  *  P  L  L  G  I  *  R  M  S  Y  T  I  P  I  S  Q  S  W  M  I  S  D  F  K  N  L  L  M  E  N  A  T  R  S   : G  C  F  I  F  L  W  R  Y  *  L  W  N  *  D  S  W  L  I  C  Q  *  S  C  *  L  L  L  A  N  S  L  T  C  L  *  R  G  G  V  V  Y  F  K  I  V  *  A  E  K  G  L  F  *  S  Q  S  V  Y  H  L  L  A  L  L  S  Y  S  G  H  W  L  L  L  L  H  S  L  D  Q  Y  *  Q  V  S  L  *  A  L  M  Q  E  *  L  Y  I  R :   S  V  L  F  G  Q  G  F  A  I  S  L  L  P  C  P  Y  M  M  N  I  A  M  M  C  *  T  C  Q  K  G  P  A  F  L   : G  L  S  T  E  R  R  L  H  Q  V  P  T  P  V  Q  I  L  Y  Q  G  L  I  L  S  E  I  H  H  L  V  Q  T  P  S  M  S  P  Y  S  S  *  S  P  S  S :   F  L  M  A  Y  S  R  A  V  N  V  M  A  K  S  W  Y  L  K  E  *  L  H  K  K  T  L  K  M  P  N  L  V  K  T  V  V  K  S  L  A  L  V  C  L  P  I  A  S  F  R  P  L  Y  I  L  L  K  P  T  V  L  V  F  C  *  :  M  M  T  P  L  K  *  L  A  Q  T  G  L  E  I  P  S  R  S  G  F  S  I  H  S  *  S  S  K  T  R  S  K  P  E  I  F  L  T  A  T  R  S  T  L  A  N  W  F  C  *  V  V  I  Q  R  G  *  G  T  *  I  L  D  H  H  L  N  L  N  *  G  E  L  S  L  R  R  *  L  E   : G  Y  E  A  S  P  N  L  Y  Q  D  F  Q  H  S  S  A  A  L  R  V  A  S  R  L  S  *  K  N  W  P  R  R  M  V  I  V  E  N  Q  K  M  L  E  E  L  P  G  Q  K  A  C  L  F  V  C  L  A  R  N  L  S  R  I  E  M  A  R  V  I  K  R  L  N  W  *  I  L  I  E  M  L  K  F  N  D  K  I  R  M  N  S  I  H  *  H  A  L  L  N  L  S  V  H  F  Q  S  T  G  L  D  *  R  L  F  *  K  L  L  L  V  L  P  A  S  N  E  F  Y  I  S  W  T  K  F  M  N  M  C  I  S  S  S  N  I  S  S  E  L  R  * </first_frame>
            <second_frame>  R  T  D  Y  G  K  T  Q  F  F  S  A  K  S  E  I  F  W  L  H  F  P  R  L  I  D  L  *  K  G  V  V  P  C  *  *  L  C  K  D  R  V  V  L  D  L  A  K  H  K  N  G  T  S  K  G  G  F  *  F  G  V  E  L  H  S  F  L  T  L  L  H  *  P  A  Y  F  G  C  L  E  R :   C  H  C  V  P  Y  R  P  Y  Y  T  H  C  R  K  L  F  P  Y  F  G  S  L  A  S  A  P  V  L  Y  I  L  L  Y  M  E  :  H  K  A  T  R  S  S  F  K  I  F  S  R  H  M  C  P  C  Y  F  I  F  M  A  L  H  W  N  C  N  *  H  Y  W  R  G  C  L  W  L  P  F  T  S  V  C  H  F  P  S  S  G  W  K  G  D  *  C  L  L  S  Q  Y  I   : *  W  D  L  G  H  S  E  R  K  L  D  H  C  *  G  F  E  G  C  L  I  P  F  L  F  L  N  H  G  *  F  P  T  S  R  T  S  *  W  K  M  L  R  D  Q  :  G  A  L  Y  S  F  G  A  I  S  C  G  T  R  T  R  G  *  Y  A  N  D  H  A  N  C  C  L  Q  I  P  L  H  A  C  K  G  V  A  S  F  I  S  R  L  Y  R  P  R  R  A  F  S  R  V  N  L  C  T  I  C  W  P  C  Y  L  T  L  A  I  G  C  Y  C  C  I  L  W  I  N  I  S  K  C  P  S  R  R  L  C  R  S  S  C  I  S   : G  V  F  S  L  G  R  A  L  L  Y  R  C  F  L  V  H  I  *  *  I  *  Q  *  C  A  R  H  A  R  R  V  L  L  S  *  :  A  S  V  Q  K  E  D  C  I  K  Y  Q  L  P  C  R  F  F  I  K  A  *  F  F  Q  K  S  T  I  *  Y  K  R  H  Q  C  P  H  T  R  V  E  A  P  R   : A  S  *  W  L  I  Q  G  L  S  T  S  W  R  N  H  G  I  S  R  S  N  Y  T  K  R  H  *  R  C  Q  I  *  *  R  Q  W  S  S  H  *  H  W  F  A  C  L  L  H  P  S  D  P  Y  T  F  C  *  S  Q  Q  C  W  Y  F  V  K :   *  *  H  H  *  N  N  *  H  K  Q  A  *  R  Y  L  R  G  V  V  F  Q  S  T  L  D  H  Q  R  P  D  Q  S  R  K  S  F  *  Q  R  R  G  V  P  W  Q  I  G  F  V  E  W  *  S  R  E  V  E  G  P  K  Y  W  I  T  T  *  I  *  T  E  A  S  *  V  *  G  V  S  S  K  :  A  T  R  H  H  Q  I  Y  I  K  I  S  N  I  Q  A  P  L  *  E  *  H  Q  G  Y  L  R  R  T  G  Q  E  E  W  *  *  *  K  I  R  R  C  W  K  N  S  Q  V  K  K  H  V  C  S  Y  V  *  R  E  I  F  Q  E  *  K  W  Q  E  *  S  R  G  S  T  G  R  Y  *  *  R  C  *  N  S  M  I  R  S  A  *  I  L  S  T  S  M  L  C  L  I  C  L  C  T  F  S  Q  Q  V  *  I  E  D  Y  F  E  S  F  Y  *  F  F  L  L  V  M  N  F  I  F  L  G  Q  S  L  *  I  C  A  S  V  H  Q  I  F  P  L  N  L  D   </second_frame>
            <third_frame>   V  L  T  T  E  R  L  S  S  F  Q  Q  N  P  R  F  F  G  C  I  F  Q  D  *  L  I  C  E  K  G  L  Y  L  V  S  D  C  V  K  I  E  W  F  L  I  *  R  S  I  R  M  E  P  P  R  G  V  F  D  S  V  W  N  F  I  R  F  L  P  Y  F  I  S  L  L  I  L  G  V  L  K   : G  V  I  V  F  P  I  V  L  I  I  L  T  V  G  N  C  S  L  I  L  G  L  W  P  V  H  L  F  Y  T  F  Y  C  I  W  S :   T  K  Q  L  G  P  A  L  K  F  L  V  G  I  C  A  L  V  I  L  Y  L  W  P  F  I  G  I  A  T  S  I  I  G  G  A  A  Y  G  F  L  S  P  V  F  A  T  F  Q  A  V  D  G  R  A  T  N  A  F  Y  H  S  I  Y  :  D  G  T  W  D  T  V  K  G  S  L  T  I  V  R  D  L  K  D  V  L  Y  H  S  Y  F  S  I  M  D  D  F  R  L  Q  E  P  P  D  G  K  C  Y  E  I  R :   V  L  Y  I  P  L  A  L  L  A  V  E  L  G  L  V  V  D  M  P  M  I  M  L  I  A  A  C  K  F  P  Y  M  L  V  K  G  W  R  R  L  F  Q  D  C  I  G  R  E  G  P  F  L  E  S  I  C  V  P  F  A  G  L  A  I  L  L  W  P  L  A  V  I  A  A  F  F  G  S  I  L  A  S  V  P  L  G  A  Y  A  G  V  V  V  Y  Q  :  E  C  S  L  W  A  G  L  C  Y  I  V  A  S  L  S  I  Y  D  E  Y  S  N  D  V  L  D  M  P  E  G  S  C  F  P  R :   P  Q  Y  R  K  K  T  A  S  S  T  N  S  R  A  D  S  L  S  R  P  D  S  F  R  N  P  P  S  S  T  N  A  I  N  V  P  I  L  E  L  K  P  L  E  :  L  L  D  G  L  F  K  G  C  Q  R  H  G  E  I  M  V  S  Q  G  V  I  T  Q  K  D  I  E  D  A  K  S  S  K  D  S  G  Q  V  I  S  I  G  L  P  A  Y  C  I  L  Q  T  L  I  H  S  A  K  A  N  S  A  G  I  L  L   : N  D  D  T  T  E  I  T  S  T  N  R  P  R  D  T  F  A  E  W  F  F  N  P  L  L  I  I  K  D  Q  I  K  A  G  N  L  S  D  S  D  E  E  Y  L  G  K  L  V  L  L  S  G  D  P  E  R  L  R  D  L  N  I  G  S  P  P  E  S  E  L  R  R  A  E  F  E  A  L  A  R  R :   L  R  G  I  T  K  S  I  S  R  F  P  T  F  K  R  R  F  E  S  S  I  K  V  I  L  E  E  L  A  K  K  N  G  D  S  R  K  S  E  D  A  G  R  T  P  R  S  K  S  M  F  V  R  M  F  S  E  K  S  F  K  N  R  N  G  K  S  D  Q  E  A  Q  L  V  D  T  D  R  D  V  E  I  Q  *  *  D  P  H  E  F  Y  P  L  A  C  F  A  *  S  V  C  A  L  S  V  N  R  F  R  L  K  T  I  L  K  A  F  I  S  S  S  C  *  *  *  I  L  Y  F  L  D  K  V  Y  E  Y  V  H  Q  F  I  K  Y  F  L  *  T  *  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69177" stop="69072"/>
                    <exon start="68804" stop="68696"/>
                    <exon start="68616" stop="68424"/>
                    <exon start="68329" stop="68193"/>
                    <exon start="67047" stop="66759"/>
                    <exon start="66650" stop="66544"/>
                    <exon start="66435" stop="66300"/>
                    <exon start="66205" stop="66007"/>
                    <exon start="65920" stop="65677"/>
                    <exon start="65591" stop="65336"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1773</number_coding_nucleotides>
                  <number_encoded_amino_acids>591</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSIRMEPPRGVFDSVWNFIRFLPYFISLLILGVLKGVIVFPIVLIILTVGNCSLILGLWPVHLFYTFYCIWSTKQLGPALKFLVGICALVILYLWPFIGIATSIIGGAAYGFLSPVFATFQAVDGRATNAFYHSIYDGTWDTVKGSLTIVRDLKDVLYHSYFSIMDDFRLQEPPDGKCYEIRVLYIPLALLAVELGLVVDMPMIMLIAACKFPYMLVKGWRRLFQDCIGREGPFLESICVPFAGLAILLWPLAVIAAFFGSILASVPLGAYAGVVVYQECSLWAGLCYIVASLSIYDEYSNDVLDMPEGSCFPRPQYRKKTASSTNSRADSLSRPDSFRNPPSSTNAINVPILELKPLELLDGLFKGCQRHGEIMVSQGVITQKDIEDAKSSKDSGQVISIGLPAYCILQTLIHSAKANSAGILLNDDTTEITSTNRPRDTFAEWFFNPLLIIKDQIKAGNLSDSDEEYLGKLVLLSGDPERLRDLNIGSPPESELRRAEFEALARRLRGITKSISRFPTFKRRFESSIKVILEELAKKNGDSRKSEDAGRTPRSKSMFVRMFSEKSFKNRNGKSDQEAQLVDTDRDVEIQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="65163" PGL_stop="65429"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65163" e_stop="65429"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="65163" e_stop="65429" e_length="267"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65163" stop="65429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587561" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGATGAACTGATGCACATATTCATAAACTTTGTCCAAGAAATATAAAATTCATTACTAGCAGGAAGAACTAATAAAAGCTTTCAAAATAGTCTTCAATCTAAACCTGTTGACTGAAAGTGCACAGACAGATTAAGCAAAGCATGCTAGTGGATAGAATTCATGCGGATCTTATCATTGAATTTCAACATCTCTATCAGTATCTACCAGTTGAGCCTCTTGATCACTCTTGCCATTTCTATTCTTGAAAGATTTCTCGCTAAACATA</gDNA_template>
            <first_frame> L  M  N  *  C  T  Y  S  *  T  L  S  K  K  Y  K  I  H  Y  *  Q  E  E  L  I  K  A  F  K  I  V  F  N  L  N  L  L  T  E  S  A  Q  T  D  *  A  K  H  A  S  G  *  N  S  C  G  S  Y  H  *  I  S  T  S  L  S  V  S  T  S  *  A  S  *  S  L  L  P  F  L  F  L  K  D  F  S  L  N  I </first_frame>
            <second_frame>  *  *  T  D  A  H  I  H  K  L  C  P  R  N  I  K  F  I  T  S  R  K  N  *  *  K  L  S  K  *  S  S  I  *  T  C  *  L  K  V  H  R  Q  I  K  Q  S  M  L  V  D  R  I  H  A  D  L  I  I  E  F  Q  H  L  Y  Q  Y  L  P  V  E  P  L  D  H  S  C  H  F  Y  S  *  K  I  S  R  *  T   </second_frame>
            <third_frame>   D  E  L  M  H  I  F  I  N  F  V  Q  E  I  *  N  S  L  L  A  G  R  T  N  K  S  F  Q  N  S  L  Q  S  K  P  V  D  *  K  C  T  D  R  L  S  K  A  C  *  W  I  E  F  M  R  I  L  S  L  N  F  N  I  S  I  S  I  Y  Q  L  S  L  L  I  T  L  A  I  S  I  L  E  R  F  L  A  K  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="72990" PGL_stop="71703"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72990" e_stop="71703"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="72990" e_stop="71703" e_length="1288"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72990" stop="71703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575916" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATCTTTTCTCTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTCTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGCGTGAGATGGCATGTACCAACTCTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTCTTCTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTCA</gDNA_template>
            <first_frame> E  W  *  R  K  V  K  N  L  Q  L  Y  P  M  E  R  C  S  V  L  *  K  K  A  S  S  M  M  K  L  F  R  F  G  N  I  *  S  K  W  G  S  S  Q  I  C  M  P  I  L  L  W  H  Q  F  T  L  L  K  G  N  L  T  *  L  I  L  S  S  R  R  W  L  L  L  E  L  S  L  Q  L  L  H  S  T  L  L  L  V  D  V  L  G  M  V  W  K  V  L  H  T  S  G  F  S  V  *  K  L  K  T  *  P  R  M  R  *  A  M  K  C  *  L  R  L  L  P  M  M  A  S  R  G  *  H  M  S  C  M  *  E  L  *  L  K  A  *  V  F  L  Q  R  L  M  M  Q  S  S  H  L  H  R  H  M  V  Q  V  L  I  *  A  F  L  A  P  A  H  Q  K  K  R  N  E  C  K  S  G  K  V  C  L  N  S  V  I  *  P  M  F  P  E  E  A  G  P  L  T  G  K  K  F  L  L  L  R  Q  K  E  H  D  K  H  N  F  I  L  L  V  C  V  S  I  Q  L  I  V  Y  M  L  C  C  F  Q  Q  R  V  Y  A  S  S  C  V  K  L  H  *  L  I  D  F  R  C  K  I  R  L  I  P  I  T  F  S  P  L  S  W  I  Q  A  F  I  F  S  L  A  L  S  I  Y  K  P  P  H  H  I  I  I  N  L  Y  N  M  P  P  F  N  L  R  I  K  Y  S  H  A  S  E  S  V  R  S  K  L  N  L  D  R  K  H  *  L  I  L  S  L  C  P  S  F  S  G  Y  S  L  F  I  L  I  A  G  V  R  W  H  V  P  T  L  L  I  L  F  P  L  Y  *  K  S  *  N  P  S  F  C  T  E  K  V  E  T  L  *  S  C  F  H  R  I  S  G  *  Q  V  I  *  G  S  I  L  I  F  F  L  Y  N  Y  Q  K  A  C  *  N  Q  F  L  D  I  C  L  M  *  V  F  I  E  L  N  F  F  V  </first_frame>
            <second_frame>  N  G  R  E  R  *  K  T  Y  S  Y  I  L  W  S  V  A  Q  C  S  R  K  R  Q  A  L  *  *  S  S  S  G  L  E  T  Y  D  Q  S  G  D  R  A  K  F  V  C  L  Y  Y  Y  G  I  N  L  H  C  S  R  E  I  *  H  S  *  F  Y  H  Q  G  D  G  Y  Y  W  S  *  A  Y  S  C  Y  I  Q  R  Y  Y  *  W  M  C  S  E  W  Y  G  K  C  C  I  R  V  V  S  A  Y  E  N  S  K  H  N  P  E  *  G  K  L  *  S  A  N  *  G  S  C  Q  *  W  Q  A  E  A  S  I  *  V  V  C  E  S  S  N  *  R  P  E  S  F  Y  K  G  L  *  C  S  H  L  I  Y  T  G  I  W  C  K  Y  *  S  K  H  S  W  P  P  P  T  R  K  K  E  T  S  A  N  Q  E  K  F  V  *  I  L  S  Y  S  R  C  S  Q  K  K  Q  A  L  *  Q  G  R  N  F  Y  C  S  D  K  R  N  M  I  S  T  T  L  Y  C  *  C  V  *  V  Y  N  S  L  S  I  C  C  A  V  F  N  K  E  C  M  L  P  L  A  *  S  Y  I  S  *  L  T  L  D  A  K  S  G  L  S  Q  L  P  F  H  L  Y  P  G  F  K  H  S  S  F  L  L  H  F  Q  Y  I  N  R  P  I  I  L  L  S  I  Y  T  I  C  L  P  L  I  C  E  S  N  T  V  M  P  P  R  V  F  V  Q  N  S  T  L  T  E  N  T  S  *  F  F  P  F  V  L  A  L  V  D  I  V  Y  S  Y  L  L  L  A  *  D  G  M  Y  Q  L  C  *  F  C  S  L  C  T  E  K  V  E  T  L  P  F  V  L  K  K  L  K  P  F  R  V  V  S  I  E  F  Q  A  D  R  *  F  E  E  A  Y  *  Y  S  S  C  T  T  T  K  K  L  A  R  I  N  S  L  T  Y  V  *  C  K  Y  L  L  N  *  I  F  L  S </second_frame>
            <third_frame>   M  V  E  K  G  E  K  P  T  V  I  S  Y  G  A  L  L  S  A  L  E  K  G  K  L  Y  D  E  A  L  Q  V  W  K  H  M  I  K  V  G  I  E  P  N  L  Y  A  Y  T  I  M  A  S  I  Y  T  A  Q  G  K  F  N  I  V  D  S  I  I  K  E  M  V  T  T  G  V  E  P  T  V  V  T  F  N  A  I  I  S  G  C  A  R  N  G  M  E  S  V  A  Y  E  W  F  Q  R  M  K  T  Q  N  I  T  P  N  E  V  S  Y  E  V  L  I  E  A  L  A  N  D  G  K  P  R  L  A  Y  E  L  Y  V  R  A  L  T  E  G  L  S  L  S  T  K  A  Y  D  A  V  I  S  S  T  Q  A  Y  G  A  S  I  D  L  S  I  L  G  P  R  P  P  E  K  K  K  R  V  Q  I  R  K  S  L  S  E  F  C  H  I  A  D  V  P  R  R  S  R  P  F  D  R  E  E  I  F  T  A  Q  T  K  G  T  *  *  A  Q  L  Y  I  A  S  V  C  K  Y  T  T  H  C  L  Y  V  V  L  F  S  T  K  S  V  C  F  L  L  R  K  A  T  L  V  D  *  L  *  M  Q  N  Q  A  Y  P  N  Y  L  F  T  S  I  L  D  S  S  I  H  L  F  S  C  T  F  N  I  *  T  A  P  S  Y  Y  Y  Q  F  I  Q  Y  A  S  L  *  F  A  N  Q  I  Q  S  C  L  R  E  C  S  F  K  T  Q  P  *  Q  K  T  L  V  D  S  F  P  L  S  *  L  *  W  I  *  F  I  H  T  Y  C  W  R  E  M  A  C  T  N  S  A  N  F  V  P  F  V  L  K  K  L  K  P  F  L  L  Y  *  K  S  *  N  P  L  E  L  F  P  *  N  F  R  L  T  G  N  L  R  K  H  I  N  I  L  L  V  Q  L  P  K  S  L  L  E  S  I  P  *  H  M  F  D  V  S  I  Y  *  T  K  F  F  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72988" stop="72332"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MVEKGEKPTVISYGALLSALEKGKLYDEALQVWKHMIKVGIEPNLYAYTIMASIYTAQGKFNIVDSIIKEMVTTGVEPTVVTFNAIISGCARNGMESVAYEWFQRMKTQNITPNEVSYEVLIEALANDGKPRLAYELYVRALTEGLSLSTKAYDAVISSTQAYGASIDLSILGPRPPEKKKRVQIRKSLSEFCHIADVPRRSRPFDREEIFTAQTKGT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72222" stop="72004"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIDFRCKIRLIPITFSPLSWIQAFIFSLALSIYKPPHHIIINLYNMPPFNLRIKYSHASESVRSKLNLDRKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="74008" PGL_stop="73359"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74008" e_stop="73359"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74008" e_stop="73359" e_length="650"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74008" stop="73359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566309" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGAAGA</gDNA_template>
            <first_frame> V  Y  S  S  M  I  R  G  F  G  K  D  K  K  L  N  S  A  M  A  L  V  E  W  L  R  R  R  R  G  K  D  N  I  G  S  I  S  L  N  V  F  I  Y  N  S  L  L  G  A  I  K  E  A  G  K  Y  D  F  V  D  K  V  M  D  D  M  V  S  E  G  V  Q  P  N  V  V  T  Y  N  T  L  M  R  T  Y  I  E  Q  G  R  E  L  E  A  L  K  L  F  R  E  M  P  K  K  G  L  T  P  S  P  A  S  Y  S  T  A  L  F  A  Y  R  R  L  E  D  G  F  G  A  I  T  F  F  V  E  T  R  E  R  Y  Q  N  G  E  I  G  N  I  E  E  E  N  W  E  D  E  F  A  K  L  E  N  F  I  V  R  I  C  Y  Q  V  M  R  Q  W  L  V  K  G  E  N  A  N  T  N  V  L  K  L  L  T  D  M  D  R  A  R  L  Q  L  S  R  A  E  Y  E  R  L  V  W  A  C  T  R  E   </first_frame>
            <second_frame>  F  T  H  L  *  L  E  V  L  V  K  I  R  N  *  T  L  L  W  H  L  S  S  G  *  G  G  G  G  A  R  T  I  L  A  L  L  A  *  M  C  S  F  I  T  V  F  *  V  P  *  K  R  R  G  S  M  I  L  L  I  K  S  W  M  I  W  F  Q  K  E  C  S  L  M  L  *  R  T  I  L  *  *  E  L  I  *  N  K  V  G  N  L  K  L  S  N  F  S  G  R  C  Q  R  R  D  S  L  L  V  L  H  P  I  P  L  P  C  L  L  I  G  D  L  K  M  D  L  V  L  *  L  S  L  S  R  H  E  R  D  I  K  M  V  K  *  E  I  L  R  K  K  T  G  R  M  N  L  P  S  L  R  I  S  *  F  E  F  A  T  R  *  C  G  S  G  W  *  R  V  K  M  Q  T  P  M  F  *  N  Y  *  R  I  W  I  G  L  G  S  N  *  V  V  Q  N  M  N  V  W  C  G  P  V  L  V  K  </second_frame>
            <third_frame>   L  L  I  Y  D  *  R  F  W  *  R  *  E  T  E  L  C  Y  G  T  C  R  V  V  K  E  E  E  G  Q  G  Q  Y  W  L  Y  *  L  K  C  V  H  L  *  Q  S  F  R  C  H  K  R  G  G  E  V  *  F  C  *  *  S  H  G  *  Y  G  F  R  R  S  A  A  *  C  C  D  V  Q  Y  F  N  E  N  L  Y  R  T  R  S  G  T  *  S  S  Q  T  F  Q  G  D  A  K  E  G  T  H  S  *  S  C  I  L  F  H  C  L  V  C  L  S  E  T  *  R  W  I  W  C  Y  N  F  L  C  R  D  T  R  E  I  S  K  W  *  N  R  K  Y  *  G  R  K  L  G  G  *  I  C  Q  A  *  E  F  H  S  S  N  L  L  P  G  D  A  A  V  A  G  K  G  *  K  C  K  H  Q  C  S  E  T  T  N  G  Y  G  *  G  *  A  P  T  K  S  C  R  I  *  T  S  G  V  G  L  Y  S  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74008" stop="73361"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYSSMIRGFGKDKKLNSAMALVEWLRRRRGKDNIGSISLNVFIYNSLLGAIKEAGKYDFVDKVMDDMVSEGVQPNVVTYNTLMRTYIEQGRELEALKLFREMPKKGLTPSPASYSTALFAYRRLEDGFGAITFFVETRERYQNGEIGNIEEENWEDEFAKLENFIVRICYQVMRQWLVKGENANTNVLKLLTDMDRARLQLSRAEYERLVWACTRE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="82127" PGL_stop="83188"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82127" e_stop="82398"/>
            <exon e_start="82689" e_stop="83188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.703" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82127" e_stop="82398" e_length="272"/>
          </exon>
          <intron i_serial="1" don_prob="0.703" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82689" e_stop="83188" e_length="500"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82127" stop="82398"/>
              <exon start="82689" stop="83188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585320" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG : GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</gDNA_template>
            <first_frame> F  L  T  T  F  I  F  L  *  V  N  E  N  D  Q  V  E  M  Q  K  V  L  Q  K  Q  L  K  G  C  K  *  *  C  R  R  S  R  Y  Q  I  R  W  *  N  K  M  G  I  T  S  R  R  Y  V  G  T  K  E  R  M  C  R  E  *  W  R  F  N  Y  H  T  *  S  L  Y  C  N  S  M  A  S  H  F  Y  T  T  N  F  I  F  W :   R  I  K  D  G  I  G  N  G  N  W  F  R  T  K  *  A  K  T  I  I  Q  R  E  R  K  R  G  L  *  I  L  A  H  G  G  G  E  R  Q  R  Q  S  V  T  L  S  R  S  I  Y  Q  R  E  E  T  C  N  K  W  T  C  P  R  Y  R  I  H  L  P  H  H  L  C  L  M  S  N  I  I  S  V  C  N  F  L  P  F  L  *  K  T  N  P  L  I  P  L  H  S  P  P  H  Q  E  N  E  *  *  W  I  K  I  G  D  K  Y  M  L  T  N  L  D  R  L  D  Y  V  V  V  F  M  V  C  N  A  K  F  *  F  Y  M  P  W  *  H  I  S  K  F  K  I  N  V  *  S  T  P  A  S  R  L  G  Y  R  V  </first_frame>
            <second_frame>  S  *  Q  L  L  Y  F  Y  K  *  T  K  M  I  K  L  R  C  K  K  F  F  R  S  N  S  K  V  A  S  S  N  A  V  V  A  D  T  K  L  G  G  E  I  K  W  E  L  R  P  G  G  M  L  V  Q  K  R  E  C  A  E  N  D  G  D  S  I  I  T  L  R  V  S  T  V  T  Q  W  H  H  I  S  I  Q  P  T  S  S  F   : G  E  L  K  M  V  L  A  M  V  T  G  L  E  P  N  E  Q  R  L  L  Y  K  G  K  E  R  E  D  C  E  Y  L  H  M  V  G  V  K  D  K  D  K  V  L  L  F  Q  D  P  S  I  K  E  R  K  L  A  T  N  G  H  V  Q  D  I  G  S  T  Y  H  T  I  C  V  *  *  V  T  L  L  V  C  A  I  S  C  L  F  F  K  K  L  T  P  S  S  P  S  T  P  L  L  I  K  K  M  S  D  D  G  S  R  L  V  I  S  I  C  S  P  T  *  I  D  *  I  M  W  L  F  L  W  C  V  M  P  N  F  N  F  I  C  P  G  S  I  Y  Q  N  S  K  L  M  C  N  L  L  Q  H  L  D  *  V  I  E  F </second_frame>
            <third_frame>   L  N  N  F  Y  I  F  I  S  K  R  K  *  S  S  *  D  A  K  S  S  S  E  A  T  Q  R  L  Q  V  V  M  P  S  *  Q  I  P  N  *  V  V  K  *  N  G  N  Y  V  Q  E  V  C  W  Y  K  R  E  N  V  Q  R  M  M  E  I  Q  L  S  H  L  E  S  L  L  *  L  N  G  I  T  F  L  Y  N  Q  L  H  L  L  :  E  N  *  R  W  Y  W  Q  W  *  L  V  *  N  Q  M  S  K  D  Y  Y  T  K  G  K  K  E  R  I  V  N  T  C  T  W  W  G  *  K  T  K  T  K  C  Y  S  F  K  I  H  L  S  K  R  G  N  L  Q  Q  M  D  M  S  K  I  *  D  P  L  T  T  P  F  V  S  N  E  *  H  Y  *  C  V  Q  F  L  A  F  S  L  K  N  *  P  P  H  P  P  P  L  P  S  S  S  R  K  *  V  M  M  D  Q  D  W  *  *  V  Y  A  H  Q  L  R  S  T  R  L  C  G  C  F  Y  G  V  *  C  Q  I  L  I  L  Y  A  L  V  A  Y  I  K  I  Q  N  *  C  V  I  Y  S  S  I  S  I  R  L  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82158" stop="82398"/>
                    <exon start="82689" stop="82915"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKMIKLRCKKFFRSNSKVASSNAVVADTKLGGEIKWELRPGGMLVQKRECAENDGDSIITLRVSTVTQWHHISIQPTSSFGELKMVLAMVTGLEPNEQRLLYKGKEREDCEYLHMVGVKDKDKVLLFQDPSIKERKLATNGHVQDIGSTYHTICV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="92058" PGL_stop="88940"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92058" e_stop="91561"/>
            <exon e_start="91444" e_stop="91132"/>
            <exon e_start="89437" e_stop="89228"/>
            <exon e_start="89149" e_stop="88940"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.978"/>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="92058" e_stop="91561" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91444" e_stop="91132" e_length="313"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89437" e_stop="89228" e_length="210"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="89227" i_stop="89150" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89149" e_stop="88940" e_length="210"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92058" stop="91561"/>
              <exon start="91444" stop="91132"/>
              <exon start="89437" stop="89228"/>
              <exon start="89149" stop="88940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573880" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG : GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT : GGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGAACAAAGAGAAGTAGAGGATGAGGAGATGAAGGCGGGACGAAGAGAGGCGAGTGTAATGAGGTACAAAGAGAAGAGACAGAACAGACTCTTTTCTAAAACTATCCGATATCAAGTTCGCAAGCTCAACGCTGAAAAACGCCCTCGCGTTAAG : GGGAGATTTGTTAAGAGGGATTGAAGTGCCTCAGTTGGAGAAGTAAACCAGTATGTGTATTGTAGTCTTGATATATAAACTGTTACAAAGGAGAAGGAGCTCTTGTCAGTCAATGAAATATATATGTAAGAGTTCAATTTGTTTCAGATAAAATATTGTTAGCTTTCAAATAGCAAAAAGTCCTTGATTGTTTTGTCATTTAACACTGAA</gDNA_template>
            <first_frame> K  H  Y  T  F  *  V  L  F  F  K  K  K  K  K  T  L  I  E  *  I  D  Y  N  C  C  Y  Y  A  Y  V  R  C  R  M  P  V  K  E  W  *  I  E  K  P  K  Q  G  E  A  Q  K  T  K  V  P  E  P  K  C  G  A  I  R  E  K  T  P  E  V  R  *  *  D  G  F  I  I  Q  R  *  H  T  *  S  S  T  A  Q  S  V  P  T  A  P  R  K  F  I  R  *  *  R  Q  Y  *  Y  C  P  R  *  Q  R  S  S  L  L  C  W  R  *  K  Q  R  H  Y  T  Q  R  S  S  C  F  F  K  G  *  N  *  Q  Q  H  K  Y  *  R  S  Q  L  H  G  S  F  V  I  G  G  Q  P  H  I  C  R  H  L  Q  :  G  T  R  R  *  A  C  T  D  G  S  E  E  Q  R  E  G  K  Q  G  R  R  E  M  G  C  L  L  R  R  C  *  F  G  S  T  *  *  E  Y  E  E  G  *  R  S  K  *  L  S  V  E  Q  T  A  T  T  I  V  T  K  A  *  L  *  R  N  I  E  C  L  V  R  *  R  S  T  L  P  S  V  P  V  P  P  D  C  S  R  H  P  *  R  F  P  R  L  R  H  A  F  F  D  K   : W  A  T  D  E  *  Q  F  S  C  A  *  S  A  R  S  N  W  K  *  T  K  R  S  R  G  *  G  D  E  G  G  T  K  R  G  E  C  N  E  V  Q  R  E  E  T  E  Q  T  L  F  *  N  Y  P  I  S  S  S  Q  A  Q  R  *  K  T  P  S  R  *   : G  E  I  C  *  E  G  L  K  C  L  S  W  R  S  K  P  V  C  V  L  *  S  *  Y  I  N  C  Y  K  G  E  G  A  L  V  S  Q  *  N  I  Y  V  R  V  Q  F  V  S  D  K  I  L  L  A  F  K  *  Q  K  V  L  D  C  F  V  I  *  H  *  </first_frame>
            <second_frame>  N  I  T  L  F  E  Y  Y  S  L  K  K  K  K  K  H  *  *  S  E  L  I  I  I  V  V  I  M  H  M  S  D  A  G  C  R  S  K  N  G  K  S  K  S  R  N  K  V  K  R  R  K  P  K  F  L  S  L  S  V  E  L  S  E  K  K  P  Q  K  S  D  D  R  M  V  S  S  S  N  G  S  T  H  D  H  Q  Q  L  N  L  F  P  L  H  P  E  N  L  L  D  D  K  D  S  T  S  T  A  Q  D  D  N  V  A  L  F  F  A  G  A  E  N  S  A  T  T  L  N  E  V  L  V  S  S  K  D  E  I  D  S  N  I  S  T  S  V  P  N  Y  M  A  V  S  S  S  E  A  S  L  T  F  A  D  T  Y  R :   G  Q  E  G  E  L  V  R  T  A  L  R  N  K  E  R  E  N  R  E  E  E  K  W  V  V  Y  S  D  V  V  D  L  D  Q  H  S  E  S  T  R  K  D  E  E  V  S  S  C  P  W  N  K  R  Q  Q  Q  L  S  L  K  L  D  Y  D  E  I  L  N  A  W  S  D  K  G  P  L  Y  L  Q  S  Q  S  P  Q  I  V  P  D  I  H  D  D  F  L  A  F  D  M  P  F  S  I  N  :  G  Q  L  M  S  S  S  S  V  V  H  R  V  P  E  V  I  G  N  E  Q  R  E  V  E  D  E  E  M  K  A  G  R  R  E  A  S  V  M  R  Y  K  E  K  R  Q  N  R  L  F  S  K  T  I  R  Y  Q  V  R  K  L  N  A  E  K  R  P  R  V  K  :  G  R  F  V  K  R  D  *  S  A  S  V  G  E  V  N  Q  Y  V  Y  C  S  L  D  I  *  T  V  T  K  E  K  E  L  L  S  V  N  E  I  Y  M  *  E  F  N  L  F  Q  I  K  Y  C  *  L  S  N  S  K  K  S  L  I  V  L  S  F  N  T  E </second_frame>
            <third_frame>   T  L  H  F  L  S  T  I  L  *  K  K  K  K  N  T  N  R  V  N  *  L  *  L  L  L  L  C  I  C  P  M  P  D  A  G  Q  R  M  V  N  R  K  A  E  T  R  *  S  A  E  N  Q  S  S  *  A  *  V  W  S  Y  Q  R  K  N  P  R  S  Q  M  I  G  W  F  H  H  P  T  V  A  H  M  I  I  N  S  S  I  C  S  H  C  T  Q  K  I  Y  *  M  I  K  T  V  L  V  L  P  K  M  T  T  *  L  S  S  L  L  A  L  K  T  A  P  L  H  S  T  K  F  L  F  L  Q  R  M  K  L  T  A  T  *  V  L  A  F  P  I  T  W  Q  F  R  H  R  R  P  A  S  H  L  P  T  L  T   : G  D  K  K  V  S  L  Y  G  R  L  *  G  T  K  R  G  K  T  G  K  K  R  N  G  L  F  T  Q  T  L  L  I  W  I  N  I  V  R  V  R  G  R  M  K  K  *  V  V  V  R  G  T  N  G  N  N  N  C  H  *  S  L  I  M  T  K  Y  *  M  L  G  P  I  K  V  H  F  T  F  S  P  S  P  P  R  L  F  Q  T  S  M  T  I  S  S  P  S  T  C  L  F  R  *  M :   G  N  *  *  V  A  V  Q  L  C  I  E  C  Q  K  *  L  E  M  N  K  E  K  *  R  M  R  R  *  R  R  D  E  E  R  R  V  *  *  G  T  K  R  R  D  R  T  D  S  F  L  K  L  S  D  I  K  F  A  S  S  T  L  K  N  A  L  A  L  R :   G  D  L  L  R  G  I  E  V  P  Q  L  E  K  *  T  S  M  C  I  V  V  L  I  Y  K  L  L  Q  R  R  R  S  S  C  Q  S  M  K  Y  I  C  K  S  S  I  C  F  R  *  N  I  V  S  F  Q  I  A  K  S  P  *  L  F  C  H  L  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92003" stop="91561"/>
                    <exon start="91444" stop="91132"/>
                    <exon start="89437" stop="89228"/>
                    <exon start="89149" stop="89126"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SELIIIVVIMHMSDAGCRSKNGKSKSRNKVKRRKPKFLSLSVELSEKKPQKSDDRMVSSSNGSTHDHQQLNLFPLHPENLLDDKDSTSTAQDDNVALFFAGAENSATTLNEVLVSSKDEIDSNISTSVPNYMAVSSSEASLTFADTYRGQEGELVRTALRNKERENREEEKWVVYSDVVDLDQHSESTRKDEEVSSCPWNKRQQQLSLKLDYDEILNAWSDKGPLYLQSQSPQIVPDIHDDFLAFDMPFSINGQLMSSSSVVHRVPEVIGNEQREVEDEEMKAGRREASVMRYKEKRQNRLFSKTIRYQVRKLNAEKRPRVKGRFVKRD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="90976" PGL_stop="91151"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90976" e_stop="91151"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="90976" e_stop="91151" e_length="176"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90976" stop="91151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGTATTAGATAGTGAAATATCAATAATATTTCATCAAATCACATAGCTACAACATTACATTATGTTTGGTTCTAAAAGGTTATCCTTTCCGCAAATTAGAAATCGTTTAAATGACCTGATAACATAAATTTAAAAGTAAGGTAAGAAAAACTAACATTTATCGAAAAAGGCATGT</gDNA_template>
            <first_frame> V  Y  *  I  V  K  Y  Q  *  Y  F  I  K  S  H  S  Y  N  I  T  L  C  L  V  L  K  G  Y  P  F  R  K  L  E  I  V  *  M  T  *  *  H  K  F  K  S  K  V  R  K  T  N  I  Y  R  K  R  H   </first_frame>
            <second_frame>  C  I  R  *  *  N  I  N  N  I  S  S  N  H  I  A  T  T  L  H  Y  V  W  F  *  K  V  I  L  S  A  N  *  K  S  F  K  *  P  D  N  I  N  L  K  V  R  *  E  K  L  T  F  I  E  K  G  M  </second_frame>
            <third_frame>   V  L  D  S  E  I  S  I  I  F  H  Q  I  T  *  L  Q  H  Y  I  M  F  G  S  K  R  L  S  F  P  Q  I  R  N  R  L  N  D  L  I  T  *  I  *  K  *  G  K  K  N  *  H  L  S  K  K  A  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="95981" PGL_stop="97968"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95981" e_stop="96111"/>
            <exon e_start="96193" e_stop="96557"/>
            <exon e_start="96633" e_stop="97153"/>
            <exon e_start="97490" e_stop="97968"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="95981" e_stop="96111" e_length="131"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="96193" e_stop="96557" e_length="365"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96633" e_stop="97153" e_length="521"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="97490" e_stop="97968" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95981" stop="96111"/>
              <exon start="96193" stop="96557"/>
              <exon start="96633" stop="97153"/>
              <exon start="97490" stop="97968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585251" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG : GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAG : GTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAG : GTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTA</gDNA_template>
            <first_frame> I  L  F  Y  P  H  T  I  K  N  M  S  T  L  F  F  T  F  S  L  L  L  L  A  P  L  L  V  I  S  S  I  Q  D  P  E  L  V  V  Q  D  V  H  R :   S  I  N  A  S  L  T  R  R  N  L  G  Y  L  S  C  G  S  G  N  P  I  D  D  C  W  R  C  N  P  N  W  E  K  N  R  Q  R  L  A  D  C  A  I  G  F  G  K  N  A  I  G  G  K  N  G  R  I  Y  V  V  T  D  S  G  N  D  D  P  V  N  P  K  P  G  T  L  R  H  A  V  I  Q  D  E  P  L  W  I  I  F  K  R  D  M  V  I  Q  L  K  Q  E  L  V  M  N  S  Y  K  T  I  D  G  R  G  A  S  V  H  I  S   : G  G  P  C  I  T  I  H  H  T  S  N  I  I  I  H  G  I  N  I  H  D  C  K  Q  S  G  N  G  N  I  R  D  S  P  N  H  S  G  W  W  D  V  S  D  G  D  G  I  S  I  F  G  G  K  N  I  W  V  D  H  C  S  L  S  N  C  H  D  G  L  I  D  A  I  H  G  S  T  A  I  T  I  S  N  N  Y  F  T  H  H  D  K  V  M  L  L  G  H  S  D  S  F  T  Q  D  K  G  M  Q  V  T  V  A  F  N  H  F  G  E  G  L  V  Q  R  M  P  R  C  R  H  G  Y  F  H  V  V  N  N  D  Y  T  H  W  E  M  Y  A  I  G  G  S  A  A  P  T  I  N  S  Q  G  N  R  F  L  A  P  N  E  K  Y  R  K  E  :  V  T  K  H  E  D  A  P  E  S  Q  W  R  S  W  N  W  R  S  E  G  D  L  M  L  N  G  A  Y  F  R  Q  T  G  A  G  A  S  S  S  S  T  Y  A  R  A  S  S  L  S  A  R  P  S  S  L  V  G  S  I  T  T  N  A  G  P  V  N  C  K  K  G  S  R  C  *  *  I  *  I  Q  W  L  L  N  L  F  Q  N  G  E  C  T  M  T  S  *  R  *  *  K  K  *  C  F  N  *  A  E  N  G  V  R  K  I  Y  G  D  H  F  A  K  L  I  S  H  R  F  L  F  L  N  F  S  M  K  N  Y  Y  Y  *  L  L  S  F  E  R  L  F  L  N  I  V  T  I  L  R  F  S   </first_frame>
            <second_frame>  F  F  S  T  P  T  P  L  K  I  C  L  L  F  S  S  H  F  P  S  F  F  *  H  H  Y  S  *  L  V  Q  S  K  I  Q  N  L  L  Y  K  T  F  I   : G  A  S  M  R  H  *  R  G  G  I  W  A  I  Y  R  A  D  Q  G  I  Q  S  M  I  A  G  D  A  T  P  I  G  K  K  I  A  S  V  *  L  I  A  P  L  G  L  E  R  M  L  S  E  E  K  M  A  E  F  T  W  L  L  I  Q  G  T  M  T  P  *  T  L  N  P  E  P  *  D  M  L  L  Y  K  T  S  L  Y  G  L  F  S  K  E  I  W  S  F  S  S  N  K  S  L  S  *  T  L  I  R  P  *  M  V  V  V  R  V  F  T  F  Q  :  V  V  R  A  L  Q  S  T  I  P  A  T  L  *  Y  T  G  L  I  Y  T  I  V  N  R  V  V  T  A  T  L  G  T  H  Q  T  I  P  D  G  G  M  F  L  M  V  M  V  F  Q  F  L  E  G  K  T  F  G  W  T  I  V  R  C  L  I  A  T  T  V  *  L  M  Q  F  T  D  L  Q  Q  S  R  Y  L  T  T  I  S  L  I  M  T  R  *  C  C  W  D  I  V  I  L  L  H  R  T  K  A  C  K  S  Q  L  L  L  I  I  L  V  K  G  W  C  K  E  C  Q  G  A  D  M  V  T  S  M  W  L  I  M  T  I  L  T  G  K  C  M  P  L  V  V  V  L  H  L  L  L  I  A  K  E  T  D  F  L  L  P  M  K  N  T  A  K  R :   *  Q  S  M  R  M  H  Q  K  V  S  G  E  A  G  T  G  D  Q  K  V  I  *  C  *  M  E  R  I  S  G  K  Q  G  Q  V  H  H  H  H  L  L  M  P  E  L  Q  A  *  A  L  G  L  L  L  *  L  D  Q  L  P  Q  M  P  V  L  L  T  A  K  K  A  L  A  A  S  K  F  K  S  S  G  Y  *  I  Y  F  K  M  E  N  V  R  *  L  V  D  D  S  E  R  S  S  V  L  I  K  L  K  M  V  Y  G  K  Y  M  E  T  I  S  Q  N  L  Y  L  I  V  F  F  F  S  I  F  P  *  K  T  I  T  T  N  Y  C  H  L  N  V  C  F  L  I  *  *  L  S  C  V  F  P  </second_frame>
            <third_frame>   S  F  L  P  P  H  H  *  K  Y  V  Y  S  F  L  H  I  F  P  P  S  S  S  T  T  T  R  N  *  F  N  P  R  S  R  T  C  C  T  R  R  S  *  :  E  H  Q  C  V  I  D  E  E  E  F  G  L  F  I  V  R  I  R  E  S  N  R  *  L  L  A  M  Q  P  Q  L  G  K  K  S  P  A  F  S  *  L  R  H  W  V  W  K  E  C  Y  R  R  K  K  W  P  N  L  R  G  Y  *  F  R  E  R  *  P  R  E  P  *  T  R  N  P  E  T  C  C  Y  T  R  R  A  F  M  D  Y  F  Q  K  R  Y  G  H  S  A  Q  T  R  A  C  H  E  L  L  *  D  H  R  W  S  W  C  E  C  S  H  F  R :   W  S  V  H  Y  N  P  P  Y  Q  Q  H  Y  N  T  R  D  *  Y  T  R  L  *  T  E  W  *  R  Q  H  *  G  L  T  K  P  F  R  M  V  G  C  F  *  W  *  W  Y  F  N  F  W  R  E  K  H  L  G  G  P  L  F  V  V  *  L  P  R  R  F  N  *  C  N  S  R  I  Y  S  N  H  D  I  *  Q  L  F  H  S  S  *  Q  G  D  V  V  G  T  *  *  F  F  Y  T  G  Q  R  H  A  S  H  S  C  F  *  S  F  W  *  R  V  G  A  K  N  A  K  V  Q  T  W  L  L  P  C  G  *  *  *  L  Y  S  L  G  N  V  C  H  W  W  *  C  C  T  Y  Y  *  *  P  R  K  Q  I  S  C  S  Q  *  K  I  P  Q  R   : G  D  K  A  *  G  C  T  R  K  S  V  E  K  L  E  L  E  I  R  R  *  F  D  V  K  W  S  V  F  Q  A  N  R  G  R  C  I  I  I  I  Y  L  C  Q  S  F  K  L  K  R  *  A  F  F  F  S  W  I  N  Y  H  K  C  R  S  C  *  L  Q  K  R  L  S  L  L  V  N  L  N  P  V  A  T  K  F  I  S  K  W  R  M  Y  D  D  *  L  T  I  V  K  E  V  V  F  *  L  S  *  K  W  C  T  E  N  I  W  R  P  F  R  K  T  Y  I  S  S  F  S  F  S  Q  F  F  H  E  K  L  L  L  L  I  I  V  I  *  T  F  V  S  *  Y  S  D  Y  L  A  F  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95981" stop="96111"/>
                    <exon start="96193" stop="96557"/>
                    <exon start="96633" stop="97153"/>
                    <exon start="97490" stop="97717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILFYPHTIKNMSTLFFTFSLLLLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCWRCNPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="100228" PGL_stop="99391"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100228" e_stop="99391"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="100228" e_stop="99391" e_length="838"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100228" stop="99856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100159" stop="99391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99836" stop="99412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595672" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTTATTAATTTGCACAGTTTTTTCTGTTTAAAAAACTACTGCAAATATTGAAGGATCATTATTCTTTCAAACTTTTTCCATCAAAAAGAAGAAAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCATCATCCACACCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTTCTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAAATTCTTAATTCTGTGAAATTTATTTTTCACAGATGGAAATTTATTACTTAAAAAAAGAGAGAACATCTAACTAATTTGTTGATTTAGTAACATGTACTTGTAACTTCCATCATGTATATTTTGTTGTTTTA</gDNA_template>
            <first_frame> P  Y  *  F  A  Q  F  F  L  F  K  K  L  L  Q  I  L  K  D  H  Y  S  F  K  L  F  P  S  K  R  R  K  K  K  S  K  K  *  K  I  S  K  N  G  S  S  S  Y  C  F  G  S  G  I  C  C  H  C  C  I  C  F  G  R  *  F  P  K  Q  F  P  C  C  I  T  I  H  I  S  N  N  P  C  I  I  T  I  H  I  S  N  I  P  C  I  I  I  H  T  S  S  S  F  T  K  Q  R  *  C  *  C  T  C  C  R  T  I  I  L  *  I  I  S  K  G  K  Y  P  I  I  I  I  S  I  I  I  V  T  I  P  I  I  I  S  I  I  S  *  I  F  K  F  R  F  C  F  F  F  F  F  S  N  F  K  C  R  N  S  G  S  R  T  R  I  T  T  I  S  R  Q  R  N  C  Y  H  Y  R  S  R  H  F  Y  T  C  *  G  T  R  R  R  R  Q  W  R  S  Y  I  E  G  G  L  L  C  F  C  C  C  S  R  C  R  I  L  L  L  I  D  S  L  I  N  T  I  F  *  K  F  L  I  L  *  N  L  F  F  T  D  G  N  L  L  L  K  K  R  E  N  I  *  L  I  C  *  F  S  N  M  Y  L  *  L  P  S  C  I  F  C  C  F  </first_frame>
            <second_frame>  L  I  N  L  H  S  F  F  C  L  K  N  Y  C  K  Y  *  R  I  I  I  L  S  N  F  F  H  Q  K  E  E  K  K  N  L  K  N  K  K  L  V  K  M  A  R  Q  V  I  V  L  A  L  V  F  V  A  I  A  V  F  A  S  A  D  N  S  P  S  S  S  P  A  A  S  P  S  T  S  A  T  T  P  A  S  S  P  S  T  S  A  T  S  P  A  S  S  S  T  P  A  A  A  S  P  N  S  G  S  A  N  A  P  A  A  A  P  S  S  S  E  S  S  P  K  A  S  T  P  S  S  S  S  P  S  S  S  S  P  S  P  S  S  S  A  S  S  P  K  S  S  N  S  G  S  V  S  S  S  S  S  P  T  S  S  A  E  T  P  E  V  E  P  A  S  P  P  S  P  D  S  E  T  A  T  T  T  A  P  A  T  S  T  P  A  E  A  P  A  A  D  A  S  G  A  A  T  L  K  A  V  S  S  V  F  A  A  A  V  A  A  A  F  F  F  *  L  I  H  *  S  I  L  F  F  K  N  S  *  F  C  E  I  Y  F  S  Q  M  E  I  Y  Y  L  K  K  E  R  T  S  N  *  F  V  D  L  V  T  C  T  C  N  F  H  H  V  Y  F  V  V  L </second_frame>
            <third_frame>   L  L  I  C  T  V  F  S  V  *  K  T  T  A  N  I  E  G  S  L  F  F  Q  T  F  S  I  K  K  K  K  K  K  I  *  K  I  K  N  *  *  K  W  L  V  K  L  L  F  W  L  W  Y  L  L  P  L  L  Y  L  L  R  Q  I  I  P  Q  A  V  P  L  L  H  H  H  P  H  Q  Q  Q  P  L  H  H  H  H  P  H  Q  Q  H  P  L  H  H  H  P  H  Q  Q  Q  L  H  Q  T  A  V  V  L  M  H  L  L  P  H  H  H  P  L  N  H  L  Q  R  Q  V  P  H  H  H  H  L  H  H  H  R  H  H  P  H  H  H  Q  H  H  L  L  N  L  Q  I  P  V  L  F  L  L  L  L  L  Q  L  Q  V  P  K  L  R  K  *  N  P  H  H  H  H  L  P  T  A  K  L  L  P  L  P  L  P  P  L  L  H  L  L  R  H  P  P  P  T  P  V  A  Q  L  H  *  R  R  S  P  L  F  L  L  L  Q  S  L  P  H  S  S  S  N  *  F  I  N  Q  Y  Y  F  L  K  I  L  N  S  V  K  F  I  F  H  R  W  K  F  I  T  *  K  K  R  E  H  L  T  N  L  L  I  *  *  H  V  L  V  T  S  I  M  Y  I  L  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100176" stop="99553"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIIILSNFFHQKEEKKNLKNKKLVKMARQVIVLALVFVAIAVFASADNSPSSSPAASPSTSATTPASSPSTSATSPASSSTPAAASPNSGSANAPAAAPSSSESSPKASTPSSSSPSSSSPSPSSSASSPKSSNSGSVSSSSSPTSSAETPEVEPASPPSPDSETATTTAPATSTPAEAPAADASGAATLKAVSSVFAAAVAAAFFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="106139" PGL_stop="105293"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106139" e_stop="105293"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106139" e_stop="105293" e_length="847"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106139" stop="105652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106107" stop="105480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105944" stop="105293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588438" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</gDNA_template>
            <first_frame> C  N  S  L  L  F  F  L  S  F  S  F  *  W  F  L  N  C  C  T  K  W  L  Q  F  F  G  K  L  *  G  T  N  F  N  L  P  Q  Q  E  S  S  L  T  L  I  N  P  N  R  Q  S  S  V  L  P  L  L  N  H  Q  S  W  L  I  L  L  V  A  D  E  I  K  Y  P  F  V  S  N  A  K  Q  R  I  Q  I  R  R  F  P  L  A  H  W  F  I  Q  V  S  L  S  V  F  S  *  T  P  F  L  K  L  G  *  L  N  L  R  M  M  E  A  S  S  *  E  K  I  H  L  R  Y  G  R  I  V  *  R  K  R  G  R  G  R  *  T  S  T  S  *  R  S  *  G  S  A  *  G  G  R  Q  R  H  R  *  N  L  M  S  L  S  G  I  M  L  I  V  S  D  *  K  I  V  L  F  P  M  S  S  P  F  *  V  E  N  I  A  Q  F  R  L  L  N  H  V  L  G  I  M  N  L  F  P  P  E  *  R  C  M  F  G  I  Y  W  S  G  F  V  *  L  L  Q  S  N  I  D  K  P  S  S  *  K  L  L  E  Q  F  *  R  T  F  E  K  F  F  H  I  Y  R  *  L  L  L  L  F  T  I  I  *  T  L  K  N  T  D  R  *  L  L  V  V  I  I  </first_frame>
            <second_frame>  A  I  L  C  Y  S  F  F  L  S  L  F  D  G  S  *  I  V  A  L  N  G  F  N  S  S  E  S  S  E  E  P  I  S  I  F  H  N  K  N  H  H  *  P  *  *  I  R  T  G  N  P  Q  F  Y  L  S  S  T  T  N  L  G  S  S  F  L  *  Q  T  K  S  N  T  L  L  S  P  T  R  N  R  G  S  K  S  E  G  F  P  L  P  T  G  L  S  K  F  P  F  R  C  F  P  K  P  H  F  S  N  W  G  S  *  I  *  E  *  W  R  R  R  R  R  R  R  F  T  *  D  M  G  G  *  C  E  E  K  E  E  E  E  D  E  Q  A  Q  V  E  E  A  E  E  A  L  E  E  E  D  K  G  I  G  E  I  *  C  P  F  P  A  *  C  *  L  F  L  T  E  R  *  S  F  F  P  C  P  R  H  F  E  L  K  I  L  L  N  F  D  C  *  I  M  F  *  E  *  *  T  F  F  L  P  S  R  D  V  C  L  G  F  I  G  Q  A  L  C  N  C  C  S  L  T  *  I  S  H  H  L  R  S  F  *  S  N  S  E  E  L  L  R  N  S  S  T  S  I  D  S  C  C  C  Y  L  Q  L  S  E  L  *  R  T  R  I  D  S  F  L  L  L  L  S </second_frame>
            <third_frame>   Q  F  S  V  I  L  S  F  F  L  F  L  M  V  L  E  L  L  H  *  M  A  S  I  L  R  K  A  L  R  N  Q  F  Q  S  S  T  T  R  I  I  T  N  L  N  K  S  E  P  A  I  L  S  S  T  S  P  Q  P  P  I  L  A  H  P  S  C  S  R  R  N  Q  I  P  F  C  L  Q  R  E  T  E  D  P  N  Q  K  V  S  P  C  P  L  V  Y  P  S  F  P  F  G  V  F  L  N  P  I  S  Q  I  G  V  V  K  S  E  N  D  G  G  V  V  V  G  E  D  S  L  K  I  W  A  D  S  V  K  K  K  R  K  R  K  M  N  K  H  K  L  K  K  L  R  K  R  L  R  R  K  T  K  A  *  V  K  F  D  V  P  F  R  H  N  V  N  C  F  *  L  K  D  S  P  F  S  H  V  L  A  I  L  S  *  K  Y  C  S  I  S  I  A  K  S  C  F  R  N  N  E  P  F  S  S  R  V  E  M  Y  V  W  D  L  L  V  R  L  C  V  T  V  A  V  *  H  R  *  A  I  I  L  E  A  F  R  A  I  L  K  N  F  *  E  I  L  P  H  L  *  I  V  V  A  V  I  Y  N  Y  L  N  S  E  E  H  G  S  I  A  S  C  C  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106077" stop="105652"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MASILRKALRNQFQSSTTRIITNLNKSEPAILSSTSPQPPILAHPSCSRRNQIPFCLQRETEDPNQKVSPCPLVYPSFPFGVFLNPISQIGVVKSENDGGVVVGEDSLKIWADSVKKKRKRKMNKHKLKKLRKRLRRKTKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="107930" PGL_stop="106926"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107930" e_stop="107670"/>
            <exon e_start="107601" e_stop="107352"/>
            <exon e_start="107156" e_stop="106926"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.845" e_score="0.996"/>
          <exon-intron don_prob="0.626" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="107930" e_stop="107670" e_length="261"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.845">
            <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107601" e_stop="107352" e_length="250"/>
          </exon>
          <intron i_serial="2" don_prob="0.626" acc_prob="0.999">
            <gDNA_intron_boundary i_start="107351" i_stop="107157" i_length="195"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="107156" e_stop="106926" e_length="231"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107930" stop="107670"/>
              <exon start="107601" stop="107352"/>
              <exon start="107156" stop="106926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586161" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG : GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG : GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAA</gDNA_template>
            <first_frame> S  Q  D  M  E  I  P  K  L  T  L  V  S  S  S  I  Q  N  Q  N  T  A  L  N  N  N  N  S  K  S  L  *  *  *  R  *  Q  F  N  S  R  K  N  Q  T  N  G  T  Y  S  T  R  K  N  Q  T  K  H  F  T  R  Q  G  I  L  C  L  S  K  I  R  H  T  R  R  *  S  F  H  F  Q  F  N  R  S  L  Q  :  E  M  F  E  T  *  I  *  N  S  *  P  Y  E  L  M  G  Q  S  F  T  T  R  S  E  V  Q  K  G  G  W  S  W  T  *  C  P  R  A  S  K  K  S  Q  I  G  L  F  L  C  E  G  F  E  *  R  *  E  I  *  V  *  K  L  *  F  *  C  C  F  M  H  C  Q  C  A  V  S  S  T  A  *  E   : G  F  R  G  S  I  S  N  S  K  T  W  R  S  V  Y  C  K  F  Q  *  Q  I  V  L  R  *  S  N  *  C  L  E  G  Q  Y  R  I  R  E  S  A  T  C  G  T  I  F  S  M  Y  *  G  I  Y  R  A  T  S  D  S  *  I  T  N  *  *  *  S  T  K  *  I  T  S  Q  *  </first_frame>
            <second_frame>  P  K  T  W  K  S  P  N  L  H  L  F  P  L  P  S  K  T  K  T  Q  P  S  I  I  I  T  P  K  A  Y  N  N  E  D  N  N  S  T  A  G  K  I  K  R  M  V  L  T  Q  Q  G  R  T  K  L  N  I  L  P  D  K  E  F  Y  A  Y  P  R  F  V  T  H  V  D  D  R  F  I  S  N  L  T  D  L  Y  R :   K  C  L  K  P  E  F  E  I  L  D  L  M  S  S  W  V  S  H  L  P  Q  E  V  K  Y  K  K  V  V  G  H  G  L  N  A  Q  E  L  A  K  N  P  K  L  D  Y  F  F  V  R  D  L  N  E  D  E  K  F  E  F  E  N  C  S  F  D  A  V  L  C  T  V  S  V  Q  Y  L  Q  Q  P  E  K  :  V  F  A  E  V  F  R  I  L  R  P  G  G  V  F  I  V  S  F  S  N  R  L  F  Y  D  K  A  I  S  A  W  R  D  S  T  G  Y  G  R  V  Q  L  V  V  Q  Y  F  Q  C  I  K  G  F  T  E  P  Q  V  I  R  K  L  P  T  N  D  D  Q  Q  N  K  S  P  L  S  K </second_frame>
            <third_frame>   P  R  H  G  N  P  Q  T  Y  T  C  F  L  F  H  P  K  P  K  H  S  P  Q  *  *  *  L  Q  K  P  I  I  M  K  I  T  I  Q  Q  Q  E  K  S  N  E  W  Y  L  L  N  K  E  E  P  N  *  T  F  Y  Q  T  R  N  F  M  P  I  Q  D  S  S  H  T  S  M  I  V  S  F  P  I  *  P  I  F  T   : G  N  V  *  N  L  N  L  K  F  L  T  L  *  A  H  G  S  V  I  Y  H  K  K  *  S  T  K  R  W  L  V  M  D  L  M  P  K  S  *  Q  K  I  P  N  W  I  I  S  L  *  G  I  *  M  K  M  R  N  L  S  L  K  I  V  V  L  M  L  F  Y  A  L  S  V  C  S  I  F  N  S  L  R  R :   F  S  R  K  Y  F  E  F  *  D  L  E  E  C  L  L  *  V  S  V  T  D  C  S  T  I  K  Q  L  V  P  G  G  T  V  Q  D  T  G  E  C  N  L  W  Y  N  I  F  N  V  L  R  D  L  Q  S  H  K  *  F  V  N  Y  Q  L  M  M  I  N  K  I  N  H  L  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107929" stop="107670"/>
                    <exon start="107601" stop="107352"/>
                    <exon start="107156" stop="106926"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKTWKSPNLHLFPLPSKTKTQPSIIITPKAYNNEDNNSTAGKIKRMVLTQQGRTKLNILPDKEFYAYPRFVTHVDDRFISNLTDLYRKCLKPEFEILDLMSSWVSHLPQEVKYKKVVGHGLNAQELAKNPKLDYFFVRDLNEDEKFEFENCSFDAVLCTVSVQYLQQPEKVFAEVFRILRPGGVFIVSFSNRLFYDKAISAWRDSTGYGRVQLVVQYFQCIKGFTEPQVIRKLPTNDDQQNKSPLSK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="107321" PGL_stop="107935"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107321" e_stop="107935"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="107321" e_stop="107935" e_length="615"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107321" stop="107935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586160" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGTTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGTTTTGGTTTTGGATGGAAGAGGAAACAAGTGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGA</gDNA_template>
            <first_frame> L  D  S  L  Y  H  L  I  K  L  P  S  Q  A  V  E  D  T  A  H  *  Q  C  I  K  Q  H  Q  N  Y  N  F  Q  T  Q  I  S  H  L  H  S  N  P  S  Q  R  N  N  P  I  W  D  F  L  L  A  L  G  H  *  V  H  D  Q  P  P  F  C  T  S  L  L  V  V  N  D  *  P  M  S  S  *  G  Q  E  F  Q  I  Q  V  S  N  I  S  Y  K  N  S  A  G  E  S  N  *  S  I  T  Y  L  N  L  I  L  T  P  L  P  V  K  I  G  *  I  G  N  E  T  I  I  D  V  C  D  E  S  W  I  G  I  K  F  L  V  W  *  N  V  *  F  G  S  S  L  L  S  K  Y  H  S  F  D  F  S  C  C  *  I  V  I  F  I  I  I  G  F  W  S  Y  Y  Y  *  G  L  C  F  G  F  G  W  K  R  K  Q  V  *  V  W  G  F  P  C  L  G  M  G </first_frame>
            <second_frame>  L  I  L  F  I  I  *  L  S  Y  L  L  R  L  L  K  I  L  H  T  D  S  A  *  N  S  I  K  T  T  I  F  K  L  K  F  L  I  F  I  Q  I  P  H  K  E  I  I  Q  F  G  I  F  C  *  L  L  G  I  K  S  M  T  N  H  L  F  V  L  H  F  L  W  *  M  T  D  P  *  A  H  K  V  K  N  F  K  F  R  F  Q  T  F  P  I  K  T  A  Q  G  S  Q  I  N  Q  *  H  I  *  T  *  F  *  H  R  Y  L  *  R  S  V  K  L  E  M  K  R  S  S  T  C  V  T  N  L  G  *  A  *  N  S  L  S  G  K  M  F  S  L  V  L  P  C  *  V  S  T  I  R  L  I  F  P  A  V  E  L  L  S  S  L  L  *  A  F  G  V  I  I  I  E  G  C  V  L  V  L  D  G  R  G  N  K  C  K  F  G  D  F  H  V  L  G  W   </second_frame>
            <third_frame>   *  F  S  L  S  S  N  *  V  T  F  S  G  C  *  R  Y  C  T  L  T  V  H  K  T  A  S  K  L  Q  F  S  N  S  N  F  S  S  S  F  K  S  L  T  K  K  *  S  N  L  G  F  F  A  S  S  W  A  L  S  P  *  P  T  T  F  L  Y  F  T  S  C  G  K  *  L  T  H  E  L  I  R  S  R  I  S  N  S  G  F  K  H  F  L  *  K  Q  R  R  G  V  K  L  I  N  N  I  F  E  L  N  F  D  T  V  T  C  K  D  R  L  N  W  K  *  N  D  H  R  R  V  *  R  I  L  D  R  H  K  I  P  C  L  V  K  C  L  V  W  F  F  L  V  E  *  V  P  F  V  *  F  F  L  L  L  N  C  Y  L  H  Y  Y  R  L  L  E  L  L  L  L  R  A  V  F  W  F  W  M  E  E  E  T  S  V  S  L  G  I  S  M  S  W  D  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 64 chains have been computed
$ 
$ memory statistics:
$ 211680 bytes spliced alignments in total
$ 32 spliced alignments have been stored
$ 6615 bytes was the average size of a spliced alignment
$ 34568 bytes predicted gene locations in total
$ 24 predicted gene locations have been stored
$ 1440 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 66 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 22:45:25
-->
