<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 22:42:00"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E435793" ref_strand="+" ref_description="SGN-E435793 [STM-62-G21]">
      <seq>gccctttctatgtttggccctgctgcctatcttatttgctctagtagtttcctgcctcatttctctacctcttcctccagccataagtttcttctctgtctcaacaatctgttacttatgtgcaaatggagtggtggctgtgctgatatctgcctcccaattgttattctacgttagtgcatctttacatgtattcatcaagaaacggtcgcaaacacgggaacataacttttcttctcttttcactgccttcctgtcatccaaggtagtcaggatcatgagattcaatccattatttgatatgacgcttgtctctttgaccctagtgtgcttcgctcatccagcattgggtcttcttttgctggtcatttctcatgctgtgtgctgccacaattccctgtccagttttttgatggcttcatttcacagccatacccagactaaggagttaatagaatctgggaacagacgtcagagtggatcggagcagttcataccccagtatgatggtgaaatcaactcgcatgttcctcagaaggagagtaattccagtagtctggactcagtaaaaagctatggtgacacccaattagagatcttcaatcatcggcatggcttgcttgtattacacttgcttgcaatgctgatgtttgtcccttcacttattgcgtggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="1103" stop="3157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1403" g_stop="1609" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1610" i_stop="1956" i_length="347">
            <donor d_prob="0.939" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1957" g_stop="2014" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="265" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2015" i_stop="2203" i_length="189">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2204" g_stop="2343" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="405" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2344" i_stop="2587" i_length="244">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2588" g_stop="2857" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="675" r_length="270" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E435793" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E435793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1403" e_stop="1609"/>
          <exon e_start="1957" e_stop="2014"/>
          <exon e_start="2204" e_stop="2343"/>
          <exon e_start="2588" e_stop="2857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACGGTTAGTTTACTCTCTCTTGAATATATCTACCACATTTATGTTACGTAAGATTTTCATACAAGTGACTGATATCATTTATTAGTCAATTTACGGACCAAAGTTGCATGTGCTGGTGAAATTCAGTCTTAATCTCAAGAGAAATTTCTAGTCCCCCTACTTCCCAACTGTCCATAAACAATTAAAATACTCTCACTCAAGGAGTGCGCTGCAGACCTAAATAAATTAATAAAAGTGACTACTCTATAACAGTGTTAAGGTTTTTCTTAAGGTACCACATAATTTAACAGAAACCGTTATGGCAAGAAATTCATTACCAACTGAGCTAATGGTAATATAATCTTTTGCAGGTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAGGTTAGTTTAATTGTGGCATTGTAGCTTGCAAAAGCATAAGTTTGTAAAAGGCTGGATTTGTACATATATTTCGGAACTGAAATTGAATGCATCTTTTGTTCCTGGTCCTCTAATCTTAGTAAATGTCGAAATTGAATGCATCTTGCATTCCTTGTTCTCTTAATAAAAAAATTTTACTTATTGAAACAGGTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAGGTACATCCCTAACTAGTACCCTTTCTCCACTCTTCTGTAGTAGTCTTATGCTGTATATTAGAATTGAGGGCCATCACATGACCATTGATTGATAGTGTGTGATTCCTAGCCGAATTCTGACCATTCCGAACTTCTGAATAGATTAAACATTTGACATTTGATATTTAGTTTTTGGCTCTGCTGATATTTGATATTTTGTTATGACAAATGTAGTCTAAAACCAATTTTTCTCGTCTGTAAACAGTTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGAT</genome_strand>
        <mrna_strand>GCCCTTTCTATGTTTGGCCCTGCTGCCTATCTTATTTGCTCTAGTAGTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCTTCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCTGCCTCCCAATTGTTATTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG...........................................................................................................................................................................................................................................................................................................................................................GTCGCAAACACGGGAACATAACTTTTCTTCTCTTTTCACTGCCTTCCTGTCATCCAAG.............................................................................................................................................................................................GTAGTCAGGATCATGAGATTCAATCCATTATTTGATATGACGCTTGTCTCTTTGACCCTAGTGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTGCCACAATTCCCTGTCCAG....................................................................................................................................................................................................................................................TTTTTTGATGGCTTCATTTCACAGCCATACCCAGACTAAGGAGTTAATAGAATCTGGGAACAGACGTCAGAGTGGATCGGAGCAGTTCATACCCCAGTATGATGGTGAAATCAACTCGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCACTTATTGCGTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459260" ref_strand="+" ref_description="SGN-E459260 [cPRO-27-G4]">
      <seq>gccctttctatgtttggccctgctgcctatcttatttgctctagtagtttcctgcctcatttctctacctcttcctccagccataagtttcttctctgtctcaacaatctgttacttatgtgcaaatggagtggtggctgtgctgatatctgcctcccaattgttattctacgttagtgcatctttacatgtattcatcaagaaacggtcgcaaacacgggaacataacttttcttctcttttcactgccttcctgtcatccaaggtagtcaggatcatgagattcaatccattatttgatatgacgcttgtctctttgaccctagtgtgcttcgctcatccagcattgggtcttcttttgctggtcatttctcatgctgtgtgctgccacaattccctgtccagttttttgatggcttcatttcacagccatacccagactaaggagttaatagaatctgggaacagacgtcagagtggatcggagcagttcataccccagtatgatggtgaaatcaactcgcatgttcctcagaaggagagtaattccagtagtctggactcagtaaaaaagctatggtgacacccaattagagatcttncatcatcggcatggcttgcttgtattacacttgcttgcaatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="1103" stop="3129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1403" g_stop="1609" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1610" i_stop="1956" i_length="347">
            <donor d_prob="0.939" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1957" g_stop="2014" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="265" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2015" i_stop="2203" i_length="189">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2204" g_stop="2343" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="405" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2344" i_stop="2587" i_length="244">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2588" g_stop="2829" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="648" r_length="243" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E459260" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1403" e_stop="1609"/>
          <exon e_start="1957" e_stop="2014"/>
          <exon e_start="2204" e_stop="2343"/>
          <exon e_start="2588" e_stop="2829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACGGTTAGTTTACTCTCTCTTGAATATATCTACCACATTTATGTTACGTAAGATTTTCATACAAGTGACTGATATCATTTATTAGTCAATTTACGGACCAAAGTTGCATGTGCTGGTGAAATTCAGTCTTAATCTCAAGAGAAATTTCTAGTCCCCCTACTTCCCAACTGTCCATAAACAATTAAAATACTCTCACTCAAGGAGTGCGCTGCAGACCTAAATAAATTAATAAAAGTGACTACTCTATAACAGTGTTAAGGTTTTTCTTAAGGTACCACATAATTTAACAGAAACCGTTATGGCAAGAAATTCATTACCAACTGAGCTAATGGTAATATAATCTTTTGCAGGTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAGGTTAGTTTAATTGTGGCATTGTAGCTTGCAAAAGCATAAGTTTGTAAAAGGCTGGATTTGTACATATATTTCGGAACTGAAATTGAATGCATCTTTTGTTCCTGGTCCTCTAATCTTAGTAAATGTCGAAATTGAATGCATCTTGCATTCCTTGTTCTCTTAATAAAAAAATTTTACTTATTGAAACAGGTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAGGTACATCCCTAACTAGTACCCTTTCTCCACTCTTCTGTAGTAGTCTTATGCTGTATATTAGAATTGAGGGCCATCACATGACCATTGATTGATAGTGTGTGATTCCTAGCCGAATTCTGACCATTCCGAACTTCTGAATAGATTAAACATTTGACATTTGATATTTAGTTTTTGGCTCTGCTGATATTTGATATTTTGTTATGACAAATGTAGTCTAAAACCAATTTTTCTCGTCTGTAAACAGTTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTA-AAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGA</genome_strand>
        <mrna_strand>GCCCTTTCTATGTTTGGCCCTGCTGCCTATCTTATTTGCTCTAGTAGTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCTTCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCTGCCTCCCAATTGTTATTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG...........................................................................................................................................................................................................................................................................................................................................................GTCGCAAACACGGGAACATAACTTTTCTTCTCTTTTCACTGCCTTCCTGTCATCCAAG.............................................................................................................................................................................................GTAGTCAGGATCATGAGATTCAATCCATTATTTGATATGACGCTTGTCTCTTTGACCCTAGTGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTGCCACAATTCCCTGTCCAG....................................................................................................................................................................................................................................................TTTTTTGATGGCTTCATTTCACAGCCATACCCAGACTAAGGAGTTAATAGAATCTGGGAACAGACGTCAGAGTGGATCGGAGCAGTTCATACCCCAGTATGATGGTGAAATCAACTCGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAAGCTATGGTGACACCCAATTAGAGATCTTNCATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355484" ref_strand="+" ref_description="SGN-E355484 [cTOS-25-K7]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttacccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaacagaagtaaggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagcgaaaatactcccactatactatactgccacattcagaatggttctgcaatatatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcacaggagtagaatatcaacttgtgtatggctttaattctactagtgattcaatcattatatttgtcgcacaaatttggttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="2935" stop="3910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3235" g_stop="3618" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E355484" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3235" e_stop="3618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTACCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAACAGAAGTAAGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGCGAAAATACTCCCACTATACTATACTGCCACATTCAGAATGGTTCTGCAATATATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCACAGGAGTAGAATATCAACTTGTGTATGGCTTTAATTCTACTAGTGATTCAATCATTATATTTGTCGCACAAATTTGGTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354617" ref_strand="+" ref_description="SGN-E354617 [cTOS-17-L21]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttagccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaagagaagtagggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagtgaaaatactcccactatacgatagtgccacattcagaatggttctgcaatagatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcagaggagtagaatatcagcttgtgtatggctttaattctacaagtgattcaatcattatatttgtcgcaaaaatttgtttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="2935" stop="3910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3235" g_stop="3618" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E354617" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3235" e_stop="3618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356718" ref_strand="+" ref_description="SGN-E356718 [cTOS-21-C14]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttagccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaagagaagtagggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagtgaaaatactcccactatacgatagtgccacattcagaatggttctgcaatagatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcagaggagtagaatatcagcttgtgtatggctttaattctacaagtgattcaatcattatatttgtcgcaaaaatttgtttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="2935" stop="3910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3235" g_stop="3618" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E356718" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3235" e_stop="3618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730854" ref_strand="+" ref_description="SGN-E730854 [LA25BF06]">
      <seq>tggagatgataacctctaagggttgctgagccccaagttccggtcggtggcagctatggctggttgggatgaagaggctcttctcatggccagtcttgttgtcgaagacacacctgatcgcctttctaagcaaaagaaacgttctgatttgctgcatttcaagactcccccaacaaattctagaaggaaaagaagggctcagaaaaggagccctgcgtccataactgcaactgttcttgatctggaagaccaagacactgcaaagcaagaaagcgagaaaaaggaggcagaattgaaattagacgagaaaggagatgaggcattggaagaacagggttgttctgttgctacatcttctactaagaagatagaaccaaaatccattgagaaagcagacacgaaagaagctgaagcatcagaggaacaggggtgttctgtttcttcttcttctgcagcatttccctccattgatctacttcgtgaagagctttcttgtgctatttgtttggagatctgttttgaaccgagtaccactccttgtggtcacagtttttgtaagaagtgtttgcgatctgctgctgataaatgtggaaagaaatgtcccaagtgcaggcagcttatcagcaatggtagatcatgcactgtaaatacagtactttggaatacaattcaactgttgtttcccaaagaagtagaaacaagaaaagcagctgctgatttgagtagtagagaagctaaacngtcaagtccagtaagagctgttgctactcattctaacagcagaacgacaagagtcctgctacctaacagtccagaatctggtcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="3755" stop="5948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4055" g_stop="4240" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4241" i_stop="4404" i_length="164">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4405" g_stop="4487" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="269" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4488" i_stop="4558" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4559" g_stop="4788" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="499" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4789" i_stop="4908" i_length="120">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4909" g_stop="4958" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="549" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4959" i_stop="5062" i_length="104">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5063" g_stop="5137" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="624" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5138" i_stop="5446" i_length="309">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5447" g_stop="5648" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="826" r_length="202" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E730854" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4055" e_stop="4240"/>
          <exon e_start="4405" e_stop="4487"/>
          <exon e_start="4559" e_stop="4788"/>
          <exon e_start="4909" e_stop="4958"/>
          <exon e_start="5063" e_stop="5137"/>
          <exon e_start="5447" e_stop="5648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAGGTACTTGCACCATTTTTTTTAGATTTTAAATAAGAAGCGAATTCAGGAATTAAAATCAAATCAATTAATCAGATAGATCATCTCTATTTTATCCGATTGGATTATCAGTCGTTCTTCTTTTTGTTTGGATTATTGGGAAATGCATAAATTTGTCATCTTTTCAGGAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAGGTAAATCATGATTTTCAAGAAGAGTTTGTGTTATGAATAATGGATTGTGTCCTGATGTTAATGTTCTGCAGAAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCTGTAAGTGTTGTAAATCCGTTCTTGAACCTTGGTGCCCCTACCTGTTTATCAATTGAGGGTGTCTTTTTTTCTATTTTCCTATTTTATTGTAGTATAAACATGATTTCTTTGAATTTGCAGATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAGGTACGATCTCAATGGCATCCTCATCAACTTATATTCATAAATCAATACATATAGGCATTTTCAGTAACTGACTCTGACAAATTTGGTAAAAATCATATCTGTAGTTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAGGTACTGTTAGGATGCTATTTCATTTCAGTTATATCCCTATTTCATTTGATATTTTTCATTTCCTGTGAGCCAAGTTGGCTGATCTTTGAAGCTAATTGGATTATAGATCAACCCAATGTTTTTCAAAAACTACATGAATAGTACTAAGTTGCAAAGTTCACATTATCAAAGTTTACATAGTTTGAGTCCTGAAAAAGAAATGTCACATAAACCAACTCAGATAGAGTATTAAATAAGCTTGAAAAGGATTTATCATGGTTCTATTGTTTCAAGTATGACGTATTCCTATTAAACTTGACTTCTTTGCAGCAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAAC-GTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</genome_strand>
        <mrna_strand>TGGAGATGATAACCTCTAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG....................................................................................................................................................................GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG.......................................................................AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT........................................................................................................................ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG........................................................................................................TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG.....................................................................................................................................................................................................................................................................................................................CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACNGTC-AAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACCTAACAGTCCAGAATCTGGTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420335" ref_strand="+" ref_description="SGN-E420335 [STM-31-G1]">
      <seq>tacttttttttacattcaactttcattttcataatacctttgtgttgtgacgtaaattcatgtacaaaaagaatatatggactatttcatgtacaaataaaatagcaaaagaaattagatcctcaaagtcaaaaccttatgttgcctctgatacgaaataatttcatgttgtggagtcatgtcagtgacttttgccagggtaacttgccagtgtttgggtcggtgaacatctgtgctactcgatccttaaggccagtgtcagtaacttcacaaaatcgactagaccaatctggtggttcaacagctcgtgtccctaaacctggggcacgatccctggacccaacatttctgtgttgttgccaatcagaaacataagtagccaccctcctgtagaacttctccttgaagacatcccaaacttgatacttgtaatggttaatcaccagcacatttctatccatatttgcatatcntaactcagactttaaatgaaaatggtgaaccacattgattaatgttgaattcaacgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="6195" stop="7306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6488" g_stop="7006" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E420335" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6488" e_stop="7006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATACATTGAACATTCAACTTCCATTTTCATATTACCTTTGTGTTGTGACGTAAATTGATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAA----A--------CTGATATGAAATAATTTCATGTTGCGGCGTCATGTCAGTGATTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTCTGCTACTCGATCTTTTAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACGGCTCGTGTCCCTAAACCAGGGGCACGATCCCTGGACCCAACATTTCTCTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACAAGCACATTTCTATCCATATTGGCATATCTAAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAATGCT</genome_strand>
        <mrna_strand>TACTTTTTTTTACATTCAACTTTCATTTTCATAATACCTTTGTGTTGTGACGTAAATTCATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAACCTTATGTTGCCTCTGATACGAAATAATTTCATGTTGTGGAGTCATGTCAGTGACTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTGTGCTACTCGATCCTTAAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACAGCTCGTGTCCCTAAACCTGGGGCACGATCCCTGGACCCAACATTTCTGTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACCAGCACATTTCTATCCATATTTGCATATCNTAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAACGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420334" ref_strand="+" ref_description="SGN-E420334 [STM-31-G1]">
      <seq>cacaatgttaagaaaccaggccagcttcttgaaagagtggatcatgtaccatactagaatcggagtacagcgttggtttatttatgataataacagcttggacgatattgatgacgtcattaagctattatctatggatgggaacataaatgtgacacgacatgtttggccttggatcaagactcaagaggcaggttttgctcattgtgcattacgagctagagatgtatgtgaatgggttggttttatggatgtcgatgagttcttccacttgcctactggtatgtcactgcttgacatattaagaaaccaatcaaggagtagtaatagtaaagttgctgagttgcgggtgtcatgtcataattttggaccatctggtctcaaacatgtcccgacacaaggggtcaccgtggggtacaattgcaggatgattgcacctgagaggcacaagagtattgtgaaaccggaagcgttgaattcaacattaatcaatgtggttcaccattttcatttaaagtctgagtttagatatgcaaatatggatagaaatgtgctggtgattaaccattacaagtatcaagtttgggatgtcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="7762" stop="6580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7462" g_stop="6880" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E420334" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7462" e_stop="6880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTCATTTATGATAATAACAGCTTGGACGATATTGATGATGTCATTAAGCTATTATC---------GAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTGTGTGAATGGGTTGGTTTTATGGATGTGGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAA-G-G-AGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCATGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCATAAGAGTATTGTGAAACCTGAAGCATTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCCAATATGGATAGAAATGTGCTTGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</genome_strand>
        <mrna_strand>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTTATTTATGATAATAACAGCTTGGACGATATTGATGACGTCATTAAGCTATTATCTATGGATGGGAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTATGTGAATGGGTTGGTTTTATGGATGTCGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAAGGAGTAGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCGTGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCACAAGAGTATTGTGAAACCGGAAGCGTTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCAAATATGGATAGAAATGTGCTGGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710437" ref_strand="+" ref_description="SGN-E710437 [FA55BG02]">
      <seq>ctttcttctggtgtatcctctgctttgctgccttcactttctcttctctactatttcaagggtttcatcaatggcggccggcgacaaccacagccctaaccgctgttaagccaattatacaaaccgtcgaattcccggacgagacagttgttttcctaaaataccctccttcaactcccttattcacaaaacatgacctatactgcctctaccttgatcctaactcttctcaacctcctgaatcagttgaaaacgatgaattattggcccaacagctcgttcgatgtcccctggttaagccacgtggagtcctgacgtcacttttcgtcaagtctaccggttacaccctctccattggaccatcacgtcggtggaattcgttggcctatgaggccatgatcgatcgcgataacacgaccatagtgtttgttaaagggtttaatcttcgtggtggaagacaatcgcacgcttcaaaattcaagtgtgtttatggttgggatgttaagaatcccaaacttgtgttacaatcagatgttgtatccattgctcaagaagttgttcgatgtaataccccagtgagcatactgaataatccagagaggtttattggtactactaacatgcccattaaggtttctgttacaatggttggtaacgaacctttagactctataccgagtcctaaacgccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="8625" stop="7211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8325" g_stop="8266" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8265" i_stop="8142" i_length="124">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8141" g_stop="7511" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="691" r_length="631" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E710437" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8325" e_stop="8266"/>
          <exon e_start="8141" e_stop="7511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAGGTAGTTAAATTCAATTCATTTCCAAACAAGCATAAATTTAGTTTGCGGTTAATATGGAGTATGATTGATTAAACCTTAATTACGATCTATTATAATTAAGTACCTTTCATTTTGCTAACTTCAGGGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCG</genome_strand>
        <mrna_strand>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG............................................................................................................................GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTACTAACATGCCCATTAAGGTTTCTGTTACAATGGTTGGTAACGAACCTTTAGACTCTATACCGAGTCCTAAACGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717689" ref_strand="+" ref_description="SGN-E717689 [FC02BH01]">
      <seq>gagggagattcgacttccggaaaatgaatgtgatcaggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19014" stop="22035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19313" g_stop="19425" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="221" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="286" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21736" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="761" r_length="475" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E717689" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19313" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</genome_strand>
        <mrna_strand>GAGGGAGATTCGACTTCCGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390477" ref_strand="+" ref_description="SGN-E390477 [TUS-40-G5](-)">
      <seq>atcagggagaggggtttgaagcatatacaccacagtagattttcacgcctcaccagatttgcttttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactttgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttttaaggaacattaaggaaccttttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19045" stop="22032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19345" g_stop="19425" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="189" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="254" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21732" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="725" r_length="471" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21733" i_stop="21795" i_length="63">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21796" g_stop="21802" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="732" r_length="7" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E390477" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19345" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21732"/>
          <exon e_start="21796" e_stop="21802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCA-GGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTTGTTTTTTCTTTTCTTTTTTAGTTTTGTCATCTTAGAATGTCTTCTTTAATCTGTATCAGAAAAAAG</genome_strand>
        <mrna_strand>ATCAGGGAGAGGGGTTTGAAGCATATACACCACAGTAGATT-TTCACGCCTCACCAGATTTGCTTTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTTTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTTTAAGGAACATTAAGGAACCTTTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA...............................................................AAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396164" ref_strand="+" ref_description="SGN-E396164 [TUS-40-G5]">
      <seq>atcaggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaggaggggggcatgaaaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19045" stop="21807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19345" g_stop="19425" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="189" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="254" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21507" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="500" r_length="246" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E396164" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19345" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTAC</genome_strand>
        <mrna_strand>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAGGAGGGGGGCATGAAAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E687976" ref_strand="+" ref_description="SGN-E687976 [T3_tus_81_O09]">
      <seq>caggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtanacgttgaaagttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19047" stop="62120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19347" g_stop="19425" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="187" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="252" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21732" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="723" r_length="471" r_score="0.998"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21733" i_stop="21795" i_length="63">
            <donor d_prob="0.951" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21796" g_stop="21816" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="744" r_length="21" r_score="0.429"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E687976" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E687976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19347" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21732"/>
          <exon e_start="21796" e_stop="21816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTTGTTTTTTCTTTTCTTTTTTAGTTTTGTCATCTTAGAATGTCTTCTTTAATCTGTATCAGAAAAAAGAGGAATCATGATAG</genome_strand>
        <mrna_strand>CAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTANACGTTGAAA...............................................................GTTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328488" ref_strand="+" ref_description="SGN-E328488 [cTOC-23-E13]">
      <seq>aggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19048" stop="22004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19348" g_stop="19425" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="186" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="251" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21704" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="694" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E328488" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19348" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGAT</genome_strand>
        <mrna_strand>AGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478742" ref_strand="+" ref_description="SGN-E478742 [cSTD-6-H14]">
      <seq>cgaagcatacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggatattatttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcaccctcatgagaaattacatcagaacgctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19060" stop="21904"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19360" g_stop="19425" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="174" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="239" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21605" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="583" r_length="344" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E478742" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19360" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21605"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGAT</genome_strand>
        <mrna_strand>CGAAGCATACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GATATTATTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTCATGAGAAATTACATCAGAACGCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418847" ref_strand="+" ref_description="SGN-E418847 [STM-28-O16]">
      <seq>tacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgacacaaaagaggtcattagtttctaaggaacattaaggangctctttgtttgtaattttgatttgggatgcatgttggtgttgcagaacatgcttgattgaatgaaaggaacagttcgttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19067" stop="22021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19367" g_stop="19425" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="167" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="232" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21719" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="687" r_length="455" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E418847" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19367" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACA</genome_strand>
        <mrna_strand>TACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGACACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGANGCTCTTTGTTTGTAATTTTGATTTGGGATGCATGTTGGTGTTGCAG---AACATGCTTGATTGAATGAAAGGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442955" ref_strand="+" ref_description="SGN-E442955 [cSTA-35-L7]">
      <seq>tacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatnctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="19067" stop="21901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19367" g_stop="19425" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20843" g_stop="20950" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="167" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="232" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21262" g_stop="21601" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="572" r_length="340" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E442955" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E442955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19367" e_stop="19425"/>
          <exon e_start="20843" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATG</genome_strand>
        <mrna_strand>TACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATNCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390373" ref_strand="+" ref_description="SGN-E390373 [TUS-41-G5](-)">
      <seq>agtttgaaaacggtagtctgtataagttgtcagctgtgttatttgagaatatacagccccgctgttgatagtaagatcagattgatttgcggtgagaaggtcatatttggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactttgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttttagatctagagattgacatgtgatacaaaagaggtcattagtttttaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgtagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="20553" stop="22032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20853" g_stop="20950" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="164" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21262" g_stop="21732" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="635" r_length="471" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21733" i_stop="21795" i_length="63">
            <donor d_prob="0.951" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21796" g_stop="21802" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="642" r_length="7" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E390373" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20853" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21732"/>
          <exon e_start="21796" e_stop="21802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAG-TATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTTGTTTTTTCTTTTCTTTTTTAGTTTTGTCATCTTAGAATGTCTTCTTTAATCTGTATCAGAAAAAAG</genome_strand>
        <mrna_strand>AGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGTGTTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATTGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATTTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTTTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTTTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTTTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTAGAAA...............................................................AAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418848" ref_strand="-" ref_description="SGN-E418848 [STM-28-O16]">
      <seq>aaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacattaaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgacacaaaagaggtcattagtttctaaggaacattaaggaggctctttgtttgtaattttgatttgggatgcatgttggtgttgcagaacatgcttgattgaatgaagagaacagttcgttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="20559" stop="21993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20859" g_stop="20950" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21111" g_stop="21175" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="157" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21262" g_stop="21719" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="613" r_length="456" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E418848" ref_strand="-">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418848" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="20859" e_stop="20950"/>
          <exon e_start="21111" e_stop="21175"/>
          <exon e_start="21262" e_stop="21719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACA-TAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACA</genome_strand>
        <mrna_strand>AAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATTAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGACACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAGGCTCTTTGTTTGTAATTTTGATTTGGGATGCATGTTGGTGTTGCAG---AACATGCTTGATTGAATGAAGAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344223" ref_strand="+" ref_description="SGN-E344223 [cTOF-16-H12]">
      <seq>taggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="20822" stop="22035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21122" g_stop="21175" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21262" g_stop="21732" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="525" r_length="471" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="529" polyA_stop="539"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E344223" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21122" e_stop="21175"/>
          <exon e_start="21262" e_stop="21732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA</genome_strand>
        <mrna_strand>TAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313252" ref_strand="+" ref_description="SGN-E313252 [cTOA-18-B15]">
      <seq>aagcacttggcctaaatttaaaaaaatgacacctttagcttcttcttactctatgagtggcctttcttaaacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23016" stop="24215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23316" g_stop="23606" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="23915" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="504" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E313252" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313252" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23316" e_stop="23606"/>
          <exon e_start="23703" e_stop="23915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAA</genome_strand>
        <mrna_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313212" ref_strand="+" ref_description="SGN-E313212 [cTOA-18-C1]">
      <seq>aagcacttggcctaaatttaaaaaaatgacacctttagcttcttcttactctatgagtggcctttcttaaacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctctagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23016" stop="24183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23316" g_stop="23606" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="23883" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="472" r_length="181" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E313212" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23316" e_stop="23606"/>
          <exon e_start="23703" e_stop="23883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAA</genome_strand>
        <mrna_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTCTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314322" ref_strand="+" ref_description="SGN-E314322 [cTOA-21-B23]">
      <seq>aacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaagaccatcaaacacattgagaatggtgaaccccagaacagtttctgagatagtgaacatctcatactgagaagctttgctgaagataaagctcagctctaaactgagatgatgctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23085" stop="24543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23385" g_stop="23606" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="24239" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="752" r_length="530" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E314322" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23385" e_stop="23606"/>
          <exon e_start="23703" e_stop="24239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG</genome_strand>
        <mrna_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG-ACCATCAAA-CACATTGAGAATGGTG-AACCCCAG-AACAGTTTCTGAGA-TAGTG-AACATCTCATACTGAGAAG-CTTTGCTGAAGATAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314435" ref_strand="+" ref_description="SGN-E314435 [cTOA-21-L22]">
      <seq>aacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaagaacatcgaaccacattgagaatggtgaaaccaagaaacagtttctgagattagtgaacatctcatactgagaagcctttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23085" stop="24530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23385" g_stop="23606" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="24230" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="747" r_length="525" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E314435" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23385" e_stop="23606"/>
          <exon e_start="23703" e_stop="24230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTG</genome_strand>
        <mrna_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAA-CATCGAACCACATTGAGAATGGTGAAA-CCAAGAAACAGTTTCTGAGATTAGTG-AACATCTCATACTGAGAAGCCTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318441" ref_strand="+" ref_description="SGN-E318441 [cTOB-10-O10]">
      <seq>aagagccattaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccataacaaactgatgatggaagagtcagcttggcttatacatgctttctcttatgcttctgctgtacccaatgaaataaaacaggggaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtatgagtctttacattgggaaaaaaggtcaactttttcttataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23158" stop="24098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23458" g_stop="23606" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="23798" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="245" r_length="96" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E318441" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23458" e_stop="23606"/>
          <exon e_start="23703" e_stop="23798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAA</genome_strand>
        <mrna_strand>AAGAGCCATTAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAACAAACTGATGATGGAAGAGTCAGCTTGGCTTATACATGCTTTCTCTTATGCTTCTGCTGTACCCAATGAAATAAAACAG................................................................................................GGGAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTATGAGTCTTTACATTGGGAAAAAAGGTCAACTTTTTCTTATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728970" ref_strand="+" ref_description="SGN-E728970 [LA19CC02]">
      <seq>ttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatatagagcgagtccccagtggaggggccaggtactcctgaagctacagagaaagaaccaccaaaccacattgagaatggtgaaacccaagaaacagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23177" stop="24488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23477" g_stop="23606" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="24188" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="616" r_length="486" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E728970" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728970" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23477" e_stop="23606"/>
          <exon e_start="23703" e_stop="24188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTT</genome_strand>
        <mrna_strand>TTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATATAGAGCGAGTCCCCAGTGGAGGGGCCAGGTACTCCTGAAGCTACAGAGAAAGAACCACCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312915" ref_strand="+" ref_description="SGN-E312915 [cTOA-8-J16]">
      <seq>gatggaagattcatcttgtcttatacatgctttctcttatgcttgtgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="23237" stop="24444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23537" g_stop="23606" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23703" g_stop="24144" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="512" r_length="442" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E312915" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23537" e_stop="23606"/>
          <exon e_start="23703" e_stop="24144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG</genome_strand>
        <mrna_strand>GATGGAAGATTCATCTTGTCTTATACATGCTTTCTCTTATGCTTGTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419775" ref_strand="+" ref_description="SGN-E419775 [STM-30-O7]">
      <seq>ccaatcacaacaaattctaacttggacttgatgaatgaagtgagatcaaccccaaaatctttgaacaagttgatcaactttactcctgccaaagaggcacacaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccactactagcaaggcggcatctaagcagtgtgcaactcctcttaagactcctatggcaacatcaaatggtgcatcaaaccgtcccatgacaacgccatcttcagaaagcagaaggattaaaacaccgattcatccctcagcttcaggaagtagaacagcagggcctaaatggaacattttgtcttctgtttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctctttgaggacagaagaaagagctacacgaaggaaacagaagcttgaagagaaattcaatgccaatgaggaaaagaaagttcaacaacaaaccacattaaaggagaaagcaggaacggaacttangagacttcgacaaagcttttgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24492" stop="26826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24792" g_stop="24998" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89">
            <donor d_prob="0.997" d_score="0.83"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25088" g_stop="25146" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="269" r_length="59" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25147" i_stop="25269" i_length="123">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25270" g_stop="25344" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="344" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25345" i_stop="25737" i_length="393">
            <donor d_prob="0.868" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="444" r_length="100" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="507" r_length="63" r_score="0.921"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="0.92"/>
            <acceptor a_prob="0.455" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26479" g_stop="26526" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="555" r_length="48" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E419775" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24792" e_stop="24998"/>
          <exon e_start="25088" e_stop="25146"/>
          <exon e_start="25270" e_stop="25344"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATCACAACTAATACTAACTTGGACTTGATGAATGAAATGAGATCAACCCCAAAATCTTTGAGCAAGTTGATCAACTTTACTCCTGCCAAAGAGCCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAA---GGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTC</genome_strand>
        <mrna_strand>CCAATCACAACAAATTCTAACTTGGACTTGATGAATGAAGTGAGATCAACCCCAAAATCTTTGAACAAGTTGATCAACTTTACTCCTGCCAAAGAGGCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCACTACTAGCAAGGCGGCATCTAAGCAGTGTGCAACTCCTCTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCGTCCCATGACAACGCCATCTTCAGAAAGCAGAAG...........................................................................................................................GATTAAAACACCGATTCATCCCTCAGCTTCAGGAAGTAGAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCTTTGAGGACAGAAGAAAGAGCTACACGAAGGAAACAG..........................................................................................AAGCTTGAAGAGAAATTCAATGCCAATGAGGAAAAGAAAGTTCAACAACAAACCACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTANGAGACTTCGACAAAGCTTTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370673" ref_strand="+" ref_description="SGN-E370673 [TUS-27-O12]">
      <seq>acaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccgctactagcaaggcatctaagcattgtgcaactccacttaagactcctatggcaacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24592" stop="27344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24892" g_stop="24998" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25088" g_stop="25146" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="166" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="266" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="329" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26479" g_stop="26589" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="440" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26777" g_stop="27044" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="708" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E370673" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24892" e_stop="24998"/>
          <exon e_start="25088" e_stop="25146"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26589"/>
          <exon e_start="26777" e_stop="27044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAA</genome_strand>
        <mrna_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271249" ref_strand="+" ref_description="SGN-E271249 [cLEM-5-M24]">
      <seq>acaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccgctactagcaaggcatctaagcattgtgcaactccacttaagactcctatggcaacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttatgaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24592" stop="26852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24892" g_stop="24998" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25088" g_stop="25146" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="166" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="266" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="329" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26479" g_stop="26552" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="403" r_length="74" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E271249" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24892" e_stop="24998"/>
          <exon e_start="25088" e_stop="25146"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTA</genome_strand>
        <mrna_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTATGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560409" ref_strand="+" ref_description="SGN-E560409 [20058]">
      <seq>aggcaacatcaaatggtgcatcaaaccgtcccatgacaacgccatcttcagaaagcagaaggtatatttccctatattgtctaattagaactgttggcaagcatttcattgattccattgacacatggttctttagttttcccacctttcctgctccaattcttgtatcttcctatttacaggattaaaacaccgattcatccctcagcttcaggaagtagaacagcagggcctaaatggaacattttgtcttctgtgtaagtgcctattacatgatgaccctagattcaacaagagtagataatcatttgtacatttgaatgaatagtagcagaacgtttttcgctttatgtgtaaaaactgctggttgaaggttcaagctaagtgtaaccaggctttgccataactcaaaataagtatattttagtggatacagtttgagcacttctccaggaccaggagactttttaaagagaatctgagagaaaattgtttctacttgaatttagttatcttcctacacctataagtatattggtgcgtgatgtatcaaactatcatgaaccaggacagtgataatcttctttctgcaagtatttggttatagagtatataattgtgtcattggatatcgcttacctttggtgttccctgttcagttccaagtctttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24786" stop="26052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25086" g_stop="25752" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E560409" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E560409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25086" e_stop="25752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATT---C--TAG--CATAATCATTTATACATTTGAATGAATAGTAGTAGAGTG-TTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCC-ACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCAC</genome_strand>
        <mrna_strand>AGGCAACATCAAATGGTGCATCAAACCGTCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAACTGTTGGCAAGCATTTCATTGATTCCATTGACACATGGTTCTTTAG--TTTTCCCACCTTTCCTGCTCCAATTCTTGTATCTTCCTATTTACAGGATTAAAACACCGATTCATCCCTCAGCTTCAGGAAGTAGAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCCTAGATTCAACAAGAGTAGATAATCATTTGTACATTTGAATGAATAGTAGCAGAACGTTTTTCGCTTTATGTGTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTTTGCCATAACTCAAAATAAGTATATTTTAGTGGATACAGTTTGAGCACTTCTCCAGGACCAGGAGACTTTTTAAAGAGAATCTGAGAGAAAATTGTTTCTACTTGAATTTAGTTATCTTCCTACACCTATAAGTATATTGGTGCGTGATGTATCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGGTTATAGAGTATATAATTGTGTCATTGGATATCGCTTACCTTTGGTGTTCCCTGTTCAGTTCCAAGTCTTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370672" ref_strand="+" ref_description="SGN-E370672 [TUS-27-O12](-)">
      <seq>aacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaaagctatccagacgtaaaattattttaaccacaatcatttaccttttatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24790" stop="27397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25090" g_stop="25146" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="157" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="220" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26479" g_stop="26589" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="331" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26777" g_stop="27098" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="653" r_length="322" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E370672" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25090" e_stop="25146"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26589"/>
          <exon e_start="26777" e_stop="27098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAC</genome_strand>
        <mrna_strand>AACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314407" ref_strand="-" ref_description="SGN-E314407 [cTOA-21-H17]">
      <seq>agcttcaggaagtataacagcagggcctaaatgggacattttgtcttctgtttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaaagctatccagacgtaaaattattttaaccacaatcatttaccttttatattaacgttctcaagtcaatattgtcctcatacattcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="24994" stop="27432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25294" g_stop="25344" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25345" i_stop="25737" i_length="393">
            <donor d_prob="0.868" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25738" g_stop="25837" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="151" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="214" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26479" g_stop="26589" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="325" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26777" g_stop="27134" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="683" r_length="358" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E314407" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314407" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25294" e_stop="25344"/>
          <exon e_start="25738" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26589"/>
          <exon e_start="26777" e_stop="27134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATT</genome_strand>
        <mrna_strand>AGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGGACATTTTGTCTTCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205292" ref_strand="+" ref_description="SGN-E205292 [cLEC-25-F16]">
      <seq>acagaagaaagagctgctcgagggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttatgaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatattccagctcaaagcaaggcttaatctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaattcatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="25508" stop="27267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25808" g_stop="25837" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25928" g_stop="25990" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="93" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26479" g_stop="26589" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="204" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26777" g_stop="26967" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="395" r_length="191" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E205292" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25808" e_stop="25837"/>
          <exon e_start="25928" e_stop="25990"/>
          <exon e_start="26479" e_stop="26589"/>
          <exon e_start="26777" e_stop="26967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTC</genome_strand>
        <mrna_strand>ACAGAAGAAAGAGCTGCTCGAGGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTATGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATTCCAGCTCAAAGCAAGGCTTAATCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATTCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549207" ref_strand="+" ref_description="SGN-E549207 [TUS-68-E15]">
      <seq>gaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaagaagatgaagattggtgtgttgtggaaggaatctaattcagttccttccaactgtatttgtgttaacctgttgaacaaaattgttacatttctgtaattgtatttactgtcaaataattgggacatttcgatgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28537" stop="27233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28237" g_stop="27527" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="709" r_length="709" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E549207" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28237" e_stop="27527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGACATTGCAT</genome_strand>
        <mrna_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAAC-AAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAAT-AATTGGGACATTTCGATGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545438" ref_strand="+" ref_description="SGN-E545438 [TUS-68-E15](-)">
      <seq>gaaaaagtttctttttattctcaaaaatgaggagagaaggtcgccaacacggtatggtccgtactacccaaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaagaagatgaagattggtgtgttgtggaaggaatctaattcagttccttccnaactgtatttgtgttaacctgttgaacaanaaattgttacatttctgtaattgtatttactgtcaaataaattggaacatttcgatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28537" stop="27233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28237" g_stop="27534" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E545438" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28237" e_stop="27534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCC-AACTGTATTTGTGTTAACCTGTTGAACAA-AAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGAC</genome_strand>
        <mrna_strand>GAAAAAGTTTCTTTTTATTC-TCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTACCCAAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCNAACTGTATTTGTGTTAACCTGTTGAACAANAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E430842" ref_strand="+" ref_description="SGN-E430842 [STM-54-M8]">
      <seq>cacaacataatggttctctgaatgttcctccttcttgacaggaaatacaattacagaaatgtaacattttttgttcagcaacaggttaatacaaatacaattggaaggaaccgaattagattccttccacaacacaccaatcttcatcttcttcaacattttcccacacaaatcccacttcacataaactcattttttcttcatcagtctcctcaatctcaacgccgatcgccggacaccaatcggagtcaactaccaattcctgatctccgtaaccttcatcggcggcatcatagtaaatttcatgatccatgtaataagaacaatcgctatccaaatgatccaaaatcccagtagctgaaaatccagataaattcaacccaggcctagcatcaacaactctccaagtaaccaacgaaacgacgtcgccgtatccctttatcttttgtgtgcccttagtcttgtctttggattttccagctggatgaatatggcagctggtgcacctgggtctaccgcacttgccggtgaacttggaatggttactgggcttagttgggacctttgcgaaaagcccagcggttggtggtgaattggacttgttcatgtacctgggctcgggtcttgggttccatggagagggtaaaattgggtaagtacggaccatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="27257" stop="28486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27557" g_stop="28186" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="670" r_length="636" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E430842" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E430842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27557" e_stop="28186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACAGTAAATACAATTACAGAAATGTAACAATTTTTGTT---CAACAGGTTAACACAAATACAGTTGGAAGGAACTGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATCTTCCCACACAAATCCCACCTCGCAGAAACTCATTTTTTCTTCATCGTTATCTTCAATCTCAACGCCGATCGCTGGAGACCCATCGGAGTCAACTACTAATTCCTGATCTCCGTAACCGTAAT---CTTCATCATAGTAAATTTCATGATCCATGTAATAAGAAGAATCGCTATCCAAATGATCCAAAATTCCAGTAGCTGAAAACCCTGAAAAATTGAACCCAGGCCTAGCATCCACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGCATCCCTTTAACTTTTGTGTGCCCTTAGTTTTGTCCTTGGATTTTGCAGCTGGATGAACATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</genome_strand>
        <mrna_strand>TTGACAGGAAATACAATTACAGAAATGTAACATTTTTTGTTCAGCAACAGGTTAATACAAATACAATTGGAAGGAACCGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATTTTCCCACACAAATCCCACTTCACATAAACTCATTTTTTCTTCATCAGTCTCCTCAATCTCAACGCCGATCGCCGGACACCAATCGGAGTCAACTACCAATTCCTGATCTCCGTAACCTTCATCGGCGGCATCATAGTAAATTTCATGATCCATGTAATAAGAACAATCGCTATCCAAATGATCCAAAATCCCAGTAGCTGAAAATCCAGATAAATTCAACCCAGGCCTAGCATCAACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGTATCCCTTTATCTTTTGTGTGCCCTTAGTCTTGTCTTTGGATTTTCCAGCTGGATGAATATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E288195" ref_strand="+" ref_description="SGN-E288195 [cLES-7-F18]">
      <seq>ttctaaatcaatcattttttgaattttttattcgtagagaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaaaaagatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28575" stop="27362"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28275" g_stop="27662" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E288195" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28275" e_stop="27662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAA</genome_strand>
        <mrna_strand>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAAAAGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295411" ref_strand="+" ref_description="SGN-E295411 [cLET-23-L15]">
      <seq>ttgaattttttattcgtagagaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28557" stop="27373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28257" g_stop="27673" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E295411" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28257" e_stop="27673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTG</genome_strand>
        <mrna_strand>TTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308829" ref_strand="+" ref_description="SGN-E308829 [cLEZ-14-L7]">
      <seq>aaaaagtttcattttattcttcaaaaatgaggagagaaggtcgcccacacggtatggtccgtacttacccaattttaccctctacatggaacccaagacccgagcccaggtacatgaacatgtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttaaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgttgtcgcggttacttgtagagatgtggatgctatgcctgggttcaatttttcagggtttgcagctactggaattttggatcatttggatggcgattcttcttattacatggatcatgaaatttactatgatgaacattacgggtacggagatcaggaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="28536" stop="27477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28236" g_stop="27777" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E308829" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28236" e_stop="27777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTT-TCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATT</genome_strand>
        <mrna_strand>AAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCCACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTACATGGAACCCAAGACCCGAGCCCAGGTACATGAACATGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTAACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTGTCG-CGGTTACTTGTAGAGATGTGGATGCTATGCCTGGGTTCAATTTTTCAGGGTTTGCAGCTACTGGAATTTTGGATCATTTGGATGGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAACATTACGGGTACGGAGATCAGGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276878" ref_strand="+" ref_description="SGN-E276878 [cLEN-14-N23]">
      <seq>tttttgtcttcaatctagtttgttaattaatggcttcttggaattccgttccactggaagtgttgtataatgttttgggatggattgcgtttgtgtcatggtctattagcttttatcctcaggtcattttgaattttcgtcggaaaagtgtggtgggattgaattttgatttcgtggtgttgaatttgacaaagcactcgtcttatctcatctacaatgcttccatgttcttcagttgtgctgttcaaaggcaatatcataatcgatatggcaaaaatgagatgatacctgtagctgccaatgatgtggctttctctactcatgctcttcttttaacagcctttaccttgtttcagatctctatctatgatcgcggaaatcagaaggtatcgaaaattgctatagcaattgtttctgttgcttggttaagtgttgcagtttgtgtgtttgtggctatccctaagcattcctggctatggctagtgtcctgtttcaacggattgcaggttgctatgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="42336" stop="40833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42036" g_stop="41889" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41814" g_stop="41682" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="281" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80">
            <donor d_prob="0.594" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41601" g_stop="41512" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="371" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41428" g_stop="41304" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="496" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41154" g_stop="41133" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="518" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E276878" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42036" e_stop="41889"/>
          <exon e_start="41814" e_stop="41682"/>
          <exon e_start="41601" e_stop="41512"/>
          <exon e_start="41428" e_stop="41304"/>
          <exon e_start="41154" e_stop="41133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAGGTAATTTTCTGCTTTTATTTTTAATTTAATTTTGCAACTTCAGTTATTCTGATCAGTTATTTCTAATTTTTTAGTGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGATGTATGTAAGTGTACCTATCTCTTTTCAGTTCAAATTATTAATTTCCTTCTCATAGACATATGGAGTAGTACATCTCTTTTCAGCGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAAGTAAGCCACCTTCTTTTAAAATCCACAATTTAACTCACATTTTTTGTCTGATCAATCCCTAGTTATTGGGTTATAAATGAATATCACTGAACCCGAACTCTATCTACTATGACAATATAAAATCTCACACTTGTTTCTGTCAATTGCAGCGGATTGCAGGTTGCTATGACA</genome_strand>
        <mrna_strand>TTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG..........................................................................TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAG................................................................................ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT...................................................................................CGCGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA.....................................................................................................................................................CGGATTGCAGGTTGCTATGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E285132" ref_strand="+" ref_description="SGN-E285132 [cLER-20-C2]">
      <seq>gatttttgtcttcaatctagtttgttaattaatggcttcttggaattccgttccactggaagtgttgtataatgttttgggatggattgcgtttgtgtcatggtctattagcttttatcctcaggtcattttgaattttcgtcggaaaagtgtggtgggattgaattttgatttcgtggtgttgaatttgacaaagcactcgtcttatctcatctacaatgcttccatgttcttcagttgtgctgttcaaaggcaatatcataatcgatctggcaaaaatgagatgatacctgtagctgccaatgatgtggctttctctactcatgctcttcttttaacagcctttaccttgtttcagatctctatctatgatcgtggaaatcagaaggtatcgaaaattgctatagcaattgtttctgttgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="42338" stop="41076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42038" g_stop="41889" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41814" g_stop="41682" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="283" r_length="133" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80">
            <donor d_prob="0.594" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41601" g_stop="41512" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="373" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41428" g_stop="41376" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="426" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E285132" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E285132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42038" e_stop="41889"/>
          <exon e_start="41814" e_stop="41682"/>
          <exon e_start="41601" e_stop="41512"/>
          <exon e_start="41428" e_stop="41376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAGGTAATTTTCTGCTTTTATTTTTAATTTAATTTTGCAACTTCAGTTATTCTGATCAGTTATTTCTAATTTTTTAGTGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGATGTATGTAAGTGTACCTATCTCTTTTCAGTTCAAATTATTAATTTCCTTCTCATAGACATATGGAGTAGTACATCTCTTTTCAGCGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTG</genome_strand>
        <mrna_strand>GATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG..........................................................................TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATCTGGCAAAAATGAG................................................................................ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT...................................................................................CGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274737" ref_strand="+" ref_description="SGN-E274737 [cLEN-13-N23]">
      <seq>tttttgtcttcaatctagtttgttaattaatggcttcttggaattccgttccactggaagtgttgtataatgttttgggatggattgcgtttgtgtcatggtctattagcttttatcctcaggtcattttgaattttcgtcggaaaagtgtggtgggattgaattttgatttcgtggtgttgaatttgacaaagcactcgtcttatctcatctacaatgcttccatgttcttcagttgtgctgttcaaaggcaatatcataatcgatatggcaaaaatgagatgatacctgtagctgccaatgatgtggctttctctactcatgctcttcttttaacagcctttaccttgtttcagatctctatctatgatcgnggaaatcagaaggtatcgaaaattgctatagcaattgtttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="42336" stop="41084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42036" g_stop="41889" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41814" g_stop="41682" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="281" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80">
            <donor d_prob="0.594" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41601" g_stop="41512" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="371" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.700" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41428" g_stop="41384" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="416" r_length="45" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E274737" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42036" e_stop="41889"/>
          <exon e_start="41814" e_stop="41682"/>
          <exon e_start="41601" e_stop="41512"/>
          <exon e_start="41428" e_stop="41384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAGGTAATTTTCTGCTTTTATTTTTAATTTAATTTTGCAACTTCAGTTATTCTGATCAGTTATTTCTAATTTTTTAGTGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAGGTTCATTGTGCGATAAACACATGTGTACATGTATGGTGTTTTGTTTTGTGCTAATTAATTAATTAATTGTTTAACTTCAGATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGATGTATGTAAGTGTACCTATCTCTTTTCAGTTCAAATTATTAATTTCCTTCTCATAGACATATGGAGTAGTACATCTCTTTTCAGCGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCT</genome_strand>
        <mrna_strand>TTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG..........................................................................TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAG................................................................................ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT...................................................................................CGNGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697440" ref_strand="+" ref_description="SGN-E697440 [FA02DG12]">
      <seq>gttaattcaacgtcttcagctgcatccatcgtcttctctccaagctatggcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcaacaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggatggagtgttatgcttgattaccgaacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattctgtcgtgctccaggggataatgatctgacaagcggagttcttgagcgtcaagtagagaaaattgatccccttcttaagtgggtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46153" stop="49434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46450" g_stop="46954" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="680" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49134" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="723" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E697440" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46450" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGA</genome_strand>
        <mrna_strand>GTTAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAACAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGATGGAGTGTTATGCTTGATTACCGAACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448932" ref_strand="+" ref_description="SGN-E448932 [cSTS-4-L2]">
      <seq>caactctacagtagcatcgtcttctctccaagctatggcggctgaaatcgttagaagaagtcttaaagcatcgaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttggcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggagatggagactcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtagatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46176" stop="47518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46457" g_stop="46954" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47218" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="599" r_length="106" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E448932" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46457" e_stop="46954"/>
          <exon e_start="47113" e_stop="47218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</genome_strand>
        <mrna_strand>CAAC-TCTACAG-T--A-GCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTTAGAAGAAGTCTTAAAGCATCGAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTGGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGAGATGGAGACTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTAGATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623865" ref_strand="+" ref_description="SGN-E623865 [89009]">
      <seq>tagcatcgtcttctctccaagttatggcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttagcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggcgatggagattcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctttgacgatgcctatgtctatcatgactggatcaattgtgggaaagaggttttatcagaaagtgatgactagagaggctgaagatggaaatggttggagtgttatgctggattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccagatgggatcaggccctttactatgccattaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaatttcctcaagatttagtattctgtcgtgctccaggggataatgatctgacaagcggagttcttggtatgttattttgcaaagtgtaattctttttatgtgctatcaacattttgcttttctcatgaaacggtttcaaacatgtctttaggagcaaacttagttttgatccctcatttgttgggcaattatggtgaatagacttttgttttactaagtggcaaaaagtagtggtctgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46176" stop="47765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46473" g_stop="46954" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47119" i_length="165">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.704" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47120" g_stop="47465" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="826" r_length="344" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E623865" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46473" e_stop="46954"/>
          <exon e_start="47120" e_stop="47465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGT-TTTTACCAAGTGGCAAAAAGTAGTGGTCTGATAT</genome_strand>
        <mrna_strand>TAGCATCGTCTTCTCTCCAAGTTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTAGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGGAGATTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTTTGACGATGCCTATGTCTATCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGATGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTGGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG.....................................................................................................................................................................ATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTTCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCAAAGTGTAATTCTTTTTATGTGCTATCAACATTTTGCTTTTCTCATGAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTG--ATCCCTCATTTGTTGGGCAA-TTATGGTGAATAGACTTTTGTTTTACTAAGTGGCAAAAAGTAGTGGTCTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458863" ref_strand="+" ref_description="SGN-E458863 [cPRO-32-J23]">
      <seq>attcaacgtcttcagctgcatcgagcaactctacagtagcatcgtcttctctccaagctatggcggctgaaatcgttagaagaagtcttaaagcatcgaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttggcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggagatggagactcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtagatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattctgtcgtgctccaggggataatgatctgacnagcggagttcttgagcgtcaagtagagaaattgatccccttcttaagtgggtagagtcagaattcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46154" stop="49447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46476" g_stop="46954" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="518" r_length="479" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="693" r_length="175" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49147" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="748" r_length="55" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E458863" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46476" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGC</genome_strand>
        <mrna_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTTAGAAGAAGTCTTAAAGCATCGAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTGGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGAGATGGAGACTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTAGATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACNAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAG-AAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458944" ref_strand="+" ref_description="SGN-E458944 [cPRO-32-J24]">
      <seq>attcaacgtcttcagctgcatcgagcaactctacagtagcatcgtcttctctccaagctatggcggctgaaatcgttagaagaagtcttaaagcatcgaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttggcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggagatggagactcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtagatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaattccctcaagatttagtattctgtcgtgctccaggggataatgatctgacaagcggagttcttgagcgtcaagtagagaaattgatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46154" stop="49417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46476" g_stop="46954" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="518" r_length="479" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="692" r_length="174" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49117" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="717" r_length="25" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E458944" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46476" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCC</genome_strand>
        <mrna_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTTAGAAGAAGTCTTAAAGCATCGAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTGGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGAGATGGAGACTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTAGATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAG-AATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAG-AAATTGATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459853" ref_strand="+" ref_description="SGN-E459853 [cPRO-29-M7]">
      <seq>catcgtcttctctccaagctatggcggctgaaatcgttagaataagtcttaaagcatcgaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttggcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggagatggagactcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtagatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataaatgaatatttgatgaagaaattccctcnagatttagtattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46176" stop="47545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46476" g_stop="46954" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47245" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="612" r_length="133" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E459853" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46476" e_stop="46954"/>
          <exon e_start="47113" e_stop="47245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCT</genome_strand>
        <mrna_strand>CATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTTAGAATAAGTCTTAAAGCATCGAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTGGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGAGATGGAGACTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTAGATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAAATGAATATTTGATGAAGAAATTCCCTCNAGATTTAGTATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316071" ref_strand="+" ref_description="SGN-E316071 [cTOA-23-D1]">
      <seq>tcttctctccaagctatggcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46181" stop="47518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46481" g_stop="46954" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47218" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="580" r_length="106" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E316071" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46481" e_stop="46954"/>
          <exon e_start="47113" e_stop="47218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</genome_strand>
        <mrna_strand>TCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405897" ref_strand="+" ref_description="SGN-E405897 [PPI-1-P6]">
      <seq>cttctctccaagctatggcggctgaaatcgttagaagaagtcttaaagcatcgaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttggcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggagatggagactcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtagatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46182" stop="47518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46482" g_stop="46954" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47218" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="579" r_length="106" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E405897" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46482" e_stop="46954"/>
          <exon e_start="47113" e_stop="47218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</genome_strand>
        <mrna_strand>CTTCTCTCCAAGCTATGGCGGCTGAAATCGTTAGAAGAAGTCTTAAAGCATCGAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTGGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGAGATGGAGACTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTAGATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324041" ref_strand="+" ref_description="SGN-E324041 [cTOC-3-I1]">
      <seq>tccaagctatggcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46188" stop="47462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46488" g_stop="46954" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47162" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="517" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E324041" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46488" e_stop="46954"/>
          <exon e_start="47113" e_stop="47162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATG</genome_strand>
        <mrna_strand>TCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316141" ref_strand="+" ref_description="SGN-E316141 [cTOA-23-L16]">
      <seq>gcggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaattccctcaagatttagtattctgtcgtgctccaggggataatgatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46199" stop="47571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46499" g_stop="46954" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47119" i_length="165">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.704" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47120" g_stop="47271" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="607" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E316141" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46499" e_stop="46954"/>
          <exon e_start="47120" e_stop="47271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTG</genome_strand>
        <mrna_strand>GCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG.....................................................................................................................................................................ATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAG-AATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343835" ref_strand="+" ref_description="SGN-E343835 [cTOF-12-I12]">
      <seq>cggctgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattnctgtcgtgctccaagggataaatgatctgacaggcggagttcttgagcgtcaagtagagaaaattgatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46200" stop="49417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46500" g_stop="46954" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="632" r_length="177" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="0.88"/>
            <acceptor a_prob="0.954" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49117" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="658" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E343835" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46500" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATT-CTGTCGTGCTCCAGGGGAT-AATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCC</genome_strand>
        <mrna_strand>CGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTNCTGTCGTGCTCCAAGGGATAAATGATCTGACAGGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAGAAAATTGATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414821" ref_strand="+" ref_description="SGN-E414821 [STM-20-A2]">
      <seq>tgaaatcgtgagaagaagtcttaaagcatcaaacttttcccttcttagaaccctaacctctttccaaactcgtagtttcagtaacttagcagaatctgtacaaccggaatctgatgccccatcttcctcattcactttctctgagaattcgggcgatggagattcgaattctcagagaaaatcagcaatcgatgataatatcttcataaagggtccaaaaaaggcttcttcgtcaaaagaagcggaatctttgacgatgcctatgtctatcatgactggatcaattgtgggaaagaggttttatcagaaagtgatgactagagaggctgaagatggaaatggttggagtgttatgctggattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaatttcctcaagaatttagtattctgtcgtgcctccaggggataatgatctgnacagcggagttcttggtatgttattttgcaaagtgtaattctttttatgtgctctcaacattttgcttttctcatgaaacggtttcaaacatgtctttaggagcaaacttagnttttgatcccttcatttgttgggcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46204" stop="47713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46504" g_stop="46954" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47413" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="754" r_length="303" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E414821" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46504" e_stop="46954"/>
          <exon e_start="47113" e_stop="47413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAG-ATTTAGTATTCTGTCGTG-CTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAG-TTTTGATATCCTTCATTTGTTGGGCAATT</genome_strand>
        <mrna_strand>TGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTTAGAACCCTAACCTCTTTCCAAACTCGTAGTTTCAGTAACTTAGCAGAATCTGTACAACCGGAATCTGATGCCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGGAGATTCGAATTCTCAGAGAAAATCAGCAATCGATGATAATATCTTCATAAAGGGTCCAAAAAAGGCTTCTTCGTCAAAAGAAGCGGAATCTTTGACGATGCCTATGTCTATCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGATGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTGGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTTCCTCAAGAATTTAGTATTCTGTCGTGCCTCCAGGGGATAATGATCTGNACAGCGGAGTTCTTGGTATGTTATTTTGCAAAGTGTAATTCTTTTTATGTGCTCTCAACATTTTGCTTTTCTCATGAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGNTTTTGAT-CCCTTCATTTGTTGGGCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335644" ref_strand="+" ref_description="SGN-E335644 [cTOE-8-D17]">
      <seq>aatcgtgagaagaagtcttaaagcatcaaacttttcccttctaagaaacctaacctctttgcatactcgctgtttcagtaacttggctgaatctgtacaaccggaatctgatgtcccatcttcctcattcactttctctgagaattcgggcgatgcagactcgaattatcagagaaaatcagcaatcgatgaaaatatcttcattaagggtccaaagaaggcttcttcgtcaaaagaggcggattctgtgacgatgcctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaagctgaagatggaaatggttggagtgttatgcttgattaccgtacgcttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagcagatgggatcaggccctttactatgccattaatgaaactatcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46207" stop="47520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46507" g_stop="46954" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47220" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="556" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E335644" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46507" e_stop="46954"/>
          <exon e_start="47113" e_stop="47220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAG</genome_strand>
        <mrna_strand>AATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572122" ref_strand="+" ref_description="SGN-E572122 [31226]">
      <seq>ctatgtctttcatgactggatcaattgtgggaaagaggttttatcagaaagtgacgactagagaggctgaagatggaaatggttggagtgttatgcttgattaccgtacacttaaaaccccttctaagcgccctctcaaatgccccactctcgctcttgctaaggctattgctgctgaatgggaataccaggaagtaatgggatcaggccctttactatgccgttaatgaaactttcatgtactgcactagaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattctgtcgtgctccagggggataatgatctgacaagcggagttcttgagcgtcaagtagagaaaattgatccccttcttaagtgggtagagtcagaattcggcttcaaacccactgtacacaccagtttttttggtggcaagcaagatgatggtcttgttagcgccattggaagcgttctcaagaaaacagatgattgtgaattggcaacaattgatgcaattgcttcagctgcacattcattagtcattgcacttggaatttaccgtggtagattggggattgaggaggctattgagttgattaggcttgaagggaagatttgcaggttgacaattggggtctggttgaagtggtcatgatgttgatattgcagattaagagttcagatgctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46464" stop="49914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46764" g_stop="46954" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47113" g_stop="47287" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="366" r_length="175" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49092" g_stop="49369" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="646" r_length="280" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="0.88"/>
            <acceptor a_prob="0.945" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49541" g_stop="49614" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="716" r_length="70" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E572122" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46764" e_stop="46954"/>
          <exon e_start="47113" e_stop="47287"/>
          <exon e_start="49092" e_stop="49369"/>
          <exon e_start="49541" e_stop="49614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAGGTCCTCTATTCCTCATTTCTCAGATGCCCATTTTAGTGAACTTCTCTTTTTCGTCATTCATGTGTTTTCTATATCCAGGGAACTTGATATTTCCCATATTGCTTGATGTTTTAATTGTGTGTTTTGCTACCCTTGGCCTGAAATGTATTTTGGTGTAGGAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCA-GGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTG-A-GGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGC</genome_strand>
        <mrna_strand>CTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAGGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACACTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG..............................................................................................................................................................GAAGTA-ATGGGATCAGGCCCTTTACTATGCCGTTAATGAAACTTTCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGGATAATGATCTGACAAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGCGCCATTGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACAATTGATGCAATTGCTTCAGCTGCACATTCATTAGTCATTGCACTTGGAATTTACCGTGGTAGATTGGGGATTGAGGAGGCTATTGAGTTGATTAGGCTTGAAGGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTGGTTGAA-GTGGTCATGATGTTGATATTGCAGA-TTAAGAGTTCAGA-TGC-TCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549657" ref_strand="+" ref_description="SGN-E549657 [TUS-6-K19](-)">
      <seq>agaaagagttccactgacgcgtcataagataattgaatatttgatgaagaaattccctcaagatttagtattctgtcgtgctccaggggataatgatctgacaagcggagttcttgagcgtcaagtagagaaaattgatccccttcttaagtgggtagagtcagaattcggcttcaaacccactgtacacaccagtttttttggtggcaagcaagatgatggtcttgttagtgccatcggaagcgttctcaagaaaacagatgattgtgaattggcaaccattgatgcaattgcttcagctgcacattctttagtcattgcacttggaattttccgtggtagattggggattgaggaagctattgagttaattaggcttgaggaagatttgcaggttgacaattggggtcttgttgaaggtggtcatgatgttgatattgcagatttaagagttcagattgcgtctgctgtggtgttccttggacttacaaggagtgtataaattttggtaatattttagtgagtcttaccttcagttgaggtcaccaacgaggtgaagtcaatatgttgggtaagttgtattaagcttattgctttcacaagaacgggagatgattgctgcaaataacctgctgatgaggaataatgaacatatttttctgaattcgaatgcacttctttgaacttggactacccatcaattttgatagtgattgatgtatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="46872" stop="50157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47172" g_stop="47287" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49092" g_stop="49369" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="394" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49541" g_stop="49872" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="725" r_length="331" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E549657" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47172" e_stop="47287"/>
          <exon e_start="49092" e_stop="49369"/>
          <exon e_start="49541" e_stop="49872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATATAATTTTCATAAGTCTTTTGCTGCCCAGCTGTACTCATTTTTTGAAAAAATAATTAAGAACGGAAAATATTGAAATGATTAATAATTCAGCTGTCCTATTTCTATGTCTAGATCTCACCCACTGCTAGTGTCAGTCATAGCCAAGGATAGAGCATGCCGTTGTTAGCTAGTTTCTTTCGAGTTTAGAAGGAGGGAATCTTTTGCTTTTCCAGCAAATGGTTAGTAATTGGAGTCTGAAATTTATATCAGCCTCTGCTAATCTGTGTAAAGAATTTTTTATTGTGCTCTTTACTCTGGTATTTGGACGACCTCATGCATCTTGAGATTACATGGTTAATAGTTTCTGCTCTTTTTTTTTCCGATGAATGATTCGATCTTAAATAATGCAATTATCTCTCTAGCTTCTGAGAGCATTTTGTGATAGCACAATTCTGCTACCCCATGTTAGAGCGTATTGGAGGACAAGACAGTAATGATATATCGCTTATTTTTTATCTCCAGAATTCCATTGCACCTTTTACATTTGAACCACCCACTATATCAAAGTTTCATTTAGCAATATATTCTGCCCGCCAAGCACACTACTAAAACCTGGTAGATAATTGAACTCTCTTCAAGGTTTAATTCAGTGAACTGAAGAATAAATTTTGATGGGGAAAATGGTGCTAGGAACAGTGTGAGTATTATTAAGAGGGACTACAGTTCAGTGTTAGGAAGTGTGATCAGACATGGTTTGGTAGGTGGTTTGAATAGGGTTCCAGTGGCCTTCTGAATTTTATAGGATCTGATATGATGTAGGAAGAATGAAGACCTAATAGGATCCGCTCAGAGTTATGAGAAGGTTCACTGGAAGGGCAGTAGTGGAGAAAGGGGAGAGAGATGAGTGGTCTTGGTTGAATATGGGGGATTTCACCACAGTTTTTTTATTGGTCGAAGGAATTAATGTTGTGACTCTAGTCCCAAAACAAAAGATAAAATGAAACGTCATTTGAGGGCCACTTCTTTTTTCAACGTTACTTGAAGTTATACTGTACTTCAGTGTTGATGGATCTAGGGAAGGGATTCTTTGAGCATGACTATCATCACCCATGATGATATCTTTCTATTCTAGTCTCCTCATTATATTTTAAAAATCCAGAAGTCTCCTTTTGGATTCTTCCTAGGGTGATTTTAAATCCGATAGAGCATATTAGATATTCCAGTGATCCTAAGCTTTTGTAACATTGTTAGCTCCTCCTATAAATGGAATATGCTTTGTGCTCAGAAGTTCCATCTATTTGGCCAACTGTGAAGCGGCCTAGAATTACTTTTTGTATTGTTAATATCACAAGAGCTAGAAGAGTTTAGACTCCATATTCTGACTGCAAGAGCTATTTACTGGTTTGGTATATGCTTACCAACAGCTAAGTTGCTCGGACTCTCCAAAAATGCTGCCACATTCGTGTCGGATCCTTCAAAAATACACTATTTTTGGAGGATCCGACATGCATCCATTTACATTTTTGAAGACTCCGAGCAACGTAGCTTATCAGCAAGCCTGCAGCACTCTTTTGTTTGTTTTGGCCTTTTATTTAGGTTTCATACTAGTACTTTTTGAATATTGATTTGACACTTCGAAATTTCACAGAGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTT</genome_strand>
        <mrna_strand>AGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAG-TGATTGATGTATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243897" ref_strand="-" ref_description="SGN-E243897 [cLED-35-D11]">
      <seq>gtttttttggtggcaagcaagatgatggtcttgttagtgccatcggaagcgttctcaagaaaacagatgattgtgaattggcaaccattgatgcaattgcttcagctgcacattctttagtcattgcacttggaattttccgtggtagattggggattgaggaagctattgagttaattaggcttgaggaagatttgcaggttgacaattggggtcttgttgaaggtggtcatgatgttgatattgcagatttaagagttcagattgcgtctgctgtggtgttccttggacttacaaggagtgtataaattttggtaatattttagtgagtcttaccttcagttgaggtcaccaacgaggtgaagtcaatatgttgggtaagttgtattaagcttattgctttcacaagaacgggagatgattgctgcaaataacctgctgatgaggaataatgaacatatttttctgaattcgaatgcacttctttgaacttggactacccatcaattttgatagtttattgatgtatgttgtaaatgaagagagcaaatcaagtatcttttacaaaaaaaaaaaaaaaaaactcgagactagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="48870" stop="69791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49170" g_stop="49369" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49541" g_stop="49905" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="565" r_length="365" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49906" i_stop="50150" i_length="245">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50151" g_stop="50182" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="597" r_length="32" r_score="0.562"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E243897" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243897" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="49170" e_stop="49369"/>
          <exon e_start="49541" e_stop="49905"/>
          <exon e_start="50151" e_stop="50182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTTATATGCAATCTAAGTCTCTTATTTAAAAACATCTCTTATTTAAAAACATAATTAAAGGAGAGTTGGTTCCCCTCGTTGACCAATATATTTCTTCTATCGTTTTTGGCTCAACGCTCTTCACGGCAGCACTGAACGCAGAGAGGTGGTTGTTTTGTAACATCACAATAGCAACAGGCTATATCACAGTCGTTGTTACACCCTGTGATATAGATATAGAAGAATGAAGTTATTTCATCAGTCACCTAATGAGAAAAAAATTAATACTATTTG</genome_strand>
        <mrna_strand>GTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTAC.....................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAACTCGAGACTAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250944" ref_strand="-" ref_description="SGN-E250944 [cLEG-13-D5]">
      <seq>aattttccgtggtagattggggattgaggaagctattgagttaattaggcttgaggaagatttgcaggttgacaattggggtcttgttgaaggtggtcatgatgttgatattgcagatttaagagttcagattgcgtctgctgtggtgttccttggacttacaaggagtgtataaattttggtaatattttagtgagtcttaccttcagttgaggtcaccaacgaggtgaagtcaatatgttgggtaagttgtattaagcttattgctttcacaagaacgggaaatgattgctgcaaataccctgctgatgaggaataatgaacatatttttctgaattcgaatgcacttctttgaacttggactacccatcaattttgatagtttattgatgtatgttgtaaatgaagagagcaaatcaagtatcttttacatctcttaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="49003" stop="50215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49303" g_stop="49369" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49541" g_stop="49912" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="439" r_length="372" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="440" polyA_stop="458"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E250944" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250944" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="49303" e_stop="49369"/>
          <exon e_start="49541" e_stop="49912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTT</genome_strand>
        <mrna_strand>AATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAAATGATTGCTGCAAATACCCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E613029" ref_strand="+" ref_description="SGN-E613029 [62798]">
      <seq>ggctattgagttgattaggcttgaggaagatttgcaggttgacaattggggtcttgtggaaggtggtcatgatgttgatattgcagatttaagagttcagattgcttctgcagtggtgttccttggacttactaggagggtataaattttggttaatcttttagtgagttttaccttaagttgaagtcaccaacgaggtgaagtcaatatgttgggtaagttgtattaagcgtatttctttcacaaggacgagagatgattgctgggaataacctgctgatgaggaataatgaatatatttttctgaaatcgaatacacttctttgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="49034" stop="50130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49333" g_stop="49369" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49541" g_stop="49834" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="332" r_length="295" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E613029" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E613029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49333" e_stop="49369"/>
          <exon e_start="49541" e_stop="49834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAGGTTTGTACACAGTCAATTTCCTTTCTTTATCTTTTGTAGGACTTCGTGTAACCTATCTAATACGCGAACAGCCAGGGCTGTTGTCTCTCATTTAGTAGTATCTCTACATAATCGATGCCTGCGCTACCAAAACGCAAGTTTTAAGTGTTCACTTTCCCTGGCTTCTTACAGGTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGG-TAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTG</genome_strand>
        <mrna_strand>GGCTATTGAGTTGATTAGGCTTGAGGAAGATTTGCAG...........................................................................................................................................................................GTTGACAATTGGGGTCTTGTGGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCTTCTGCAGTGGTGTTCCTTGGACTTACTAGGAGGGTATAAATTTTGGTTAATCTTTTAGTGAGTTTTACCTTAAGTTGAAGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCGTATTTCTTTCACAAGGACGAGAGATGATTGCTGGGAATAACCTGCTGATGAGGAATAATGAATATATTTTTCTGAAATCGAATACACTTCTTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320448" ref_strand="+" ref_description="SGN-E320448 [cTOB-22-N9]">
      <seq>gaagttgttagtagtagttagctttctagtttctatggtgattattattagtacaattgttggaacaagcactcgtctgccctttctcatagactctaagactgtggagccatctcaatacttcacagtaacagggtgtaacaacgactgtgatatagcctgttgcgtattgtgatgttacaaaacaaccacctctctgcgttcagtgctgccgtgaagagcgttgagccaaaaacgatagaagaaatatattggtcaacgaggggaaccaactctcctttaattatgtttttaaataagagatgtttttaaataagagacttagattgcatataagagatgtaaaagatacttgatttgctctcttcatttacaacatacatcaataaactatcaaaattgatgggtagtccaagttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="50630" stop="49522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50330" g_stop="50197" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50196" i_stop="50112" i_length="85">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50111" g_stop="49817" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="430" r_length="296" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E320448" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50330" e_stop="50197"/>
          <exon e_start="50111" e_stop="49817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTGTTAGTAGTAGTTAGCTTTCTAGTTTCTATGGTGATTATTATTAGTACAATTGTTGGAACAAGCACTCGTCTGCCCTTTCTCATAGACTCTAAGACTGTGGAGCCATCTCAATACTTCACAGTAACAGGTTACCACTTGAAACAAATAGTATTAATTTTTTTCTCATTAGGTGACTGATGAAATAACTTCATTCTTCTATATCTATATCACAGGGTGTAACAACGACTGTGATATAGCCTGTTGC-TATTGTGATGTTACAAAACAACCACCTCTCTGCGTTCAGTGCTGCCGTGAAGAGCGTTGAGCCAAAAACGATAGAAGAAATATATTGGTCAACGAGGGGAACCAACTCTCCTTTAATTATGTTTTTAAATAAGAGATGTTTTTAAATAAGAGACTTAGATTGCATATAAGAGATGTAAAAGATACTTGATTTGCTCTCTTCATTTACAACATACATCAATAAACTATCAAAATTGATGGGTAGTCCAAGTTCAAAGAAGTGCA</genome_strand>
        <mrna_strand>GAAGTTGTTAGTAGTAGTTAGCTTTCTAGTTTCTATGGTGATTATTATTAGTACAATTGTTGGAACAAGCACTCGTCTGCCCTTTCTCATAGACTCTAAGACTGTGGAGCCATCTCAATACTTCACAGTAACAG.....................................................................................GGTGTAACAACGACTGTGATATAGCCTGTTGCGTATTGTGATGTTACAAAACAACCACCTCTCTGCGTTCAGTGCTGCCGTGAAGAGCGTTGAGCCAAAAACGATAGAAGAAATATATTGGTCAACGAGGGGAACCAACTCTCCTTTAATTATGTTTTTAAATAAGAGATGTTTTTAAATAAGAGACTTAGATTGCATATAAGAGATGTAAAAGATACTTGATTTGCTCTCTTCATTTACAACATACATCAATAAACTATCAAAATTGATGGGTAGTCCAAGTTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376516" ref_strand="+" ref_description="SGN-E376516 [TUS-17-D15](-)">
      <seq>cacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgttattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatacagtatcaatttcaagtacattgctccataatgccattaaggcagtttgtgtttcctcataagtttttttagctaatgtgtgttatttgaaggagtgattatttgttattccctttgtatgttgcttctcagcaacatacagatctgtgtggtgtttaatgatactcgagtttctttgagtcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53802" stop="50402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53502" g_stop="53334" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50695" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="697" r_length="527" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E376516" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53502" e_stop="53334"/>
          <exon e_start="51221" e_stop="50695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATG-TATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGCTCCATAATGCCATTAAGGCAGTTTGTGTTTCCTCATAAGTTTTTTTAGCTAATGTGTGTTATTTGAAGGAGTGATTATTTGTTATTCCCTTTGTATGTTGCTTCTCAGCAACATACAGATCTGTGTGGTGTTTAATGATACTCGAGTTTCTTTGAGTCAATTAGTTT</genome_strand>
        <mrna_strand>CACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGCTCCATAATGCCATTAAGGCAGTTTGTGTTTCCTCATAAGTTTTTTTAGCTAATGTGTGTTATTTGAAGGAGTGATTATTTGTTATTCCCTTTGTATGTTGCTTCTCAGCAACATACAGATCTGTGTGGTGTTTAATGATACTCGAGTTTCTTTGAGTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604057" ref_strand="+" ref_description="SGN-E604057 [67248]">
      <seq>aagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatttactcaggagcgcctggacgcagttaatgatgaattcaagctttatcgctgccatactattctgaactgttctcgtgcttgcccaaagggcttaaatcctgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgttccagtcttttctgctaagattgattttgaaggactagtaggaggttgtgtctcaaaataatgtatgcacagattgtaatttactctctgagatcttttttatacttgaatttgggatgaaaggtgcatctctctgaaatataatacagtatcaatttcaagtacattgctccataatgcatttaaggcagtttgtgtttcctcataagtttggtttagctaatgtgtgttatttcaaggagtgattatttgtgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53806" stop="50476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53506" g_stop="53334" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50776" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="618" r_length="445" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E604057" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53506" e_stop="53334"/>
          <exon e_start="51221" e_stop="50776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGCTCCATAATGCCATTAAGGCAGTTTGTGTTTCCTCATAAGTTT-TTTTAGCTAATGTGTGTTATTTGAAGGAGTGATTATTTGTTATT</genome_strand>
        <mrna_strand>AAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATTTACTCAGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCATACTATTCTGAACTGTTCTCGTGCTTGCCCAAAGGGCTTAAATCCTGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTA--GTGTTCCAGTCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCTCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTTATACTTGAATTTGGGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGCTCCATAATGCATTTAAGGCAGTTTGTGTTTCCTCATAAGTTTGGTTTAGCTAATGTGTGTTATTTCAAGGAGTGATTATTTGTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412855" ref_strand="+" ref_description="SGN-E412855 [STM-16-N14]">
      <seq>tgcattatggagcaatgtacttgaaattgatactgtattatatttcagagagatgcacctttcatctcaaattcaagtataaaaaagatctcagagagtaaattacaatctgtgcatacattattttgagacacaacctcctactagtccttcaaaatcaatcttcgcagaaaagactggaacactacactgcaggctcaaggtgccatctccagcttcttgatgttctgaatatgcttcccaggatttaagccctttgggcaagcacgagaacagttcagaatagtatggcagcgataaagcttgaattcatcattaactgcgtccaggcgctcctgagtaaattcatcacggctatccatgatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="50552" stop="51521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50851" g_stop="51221" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E412855" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50851" e_stop="51221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATTATGGAGCAATGTACTTGAAATTGATACTGTATTATATTTCAGAGAGATGCACCTTTCATCTCAAATTCAAGTATTAAAAAGATCTCAGAGAGTAAATTACAATCTGTGCATACATTATTTTGGGACACAACCTCCTACTAGTCCTTCAAAATCAATCTTAGCAGAAAAGATTGGAACACACTACACTGCAGGCTCAAGGTGCCATCTCCAGCTTCTTGATGTTCTGAATATGCTTCCCGGGATTTAATCCCTTTGGGCAAGCACGAGAACAATTCAGAATAGTATGGCAGCGATAAAGCTTGAATTCGTCATTAACTGCATCCAGGCGCTCCTGAGTATATTCATCACGGCTATCCATGATCCAT</genome_strand>
        <mrna_strand>TGCATTATGGAGCAATGTACTTGAAATTGATACTGTATTATATTTCAGAGAGATGCACCTTTCATCTCAAATTCAAGTATAAAAAAGATCTCAGAGAGTAAATTACAATCTGTGCATACATTATTTTGAGACACAACCTCCTACTAGTCCTTCAAAATCAATCTTCGCAGAAAAGACTGG-A-ACACTACACTGCAGGCTCAAGGTGCCATCTCCAGCTTCTTGATGTTCTGAATATGCTTCCCAGGATTTAAGCCCTTTGGGCAAGCACGAGAACAGTTCAGAATAGTATGGCAGCGATAAAGCTTGAATTCATCATTAACTGCGTCCAGGCGCTCCTGAGTAAATTCATCACGGCTATCCATGATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701358" ref_strand="+" ref_description="SGN-E701358 [FA15DA05]">
      <seq>ctctttttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatctttctgctaaaattgattttgaaggactagtaggaagttgtgtcccaaaataatgtatgcacagattgaaatttactctctgaaactttttaataccggaattttagatgaaaggggcatttctccggaatataataccgtatcaatttcaagtaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54315" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54015" g_stop="53334" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50871" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="1031" r_length="349" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E701358" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>1033</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54015" e_stop="53334"/>
          <exon e_start="51221" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>CTCTTTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATC-TTTCTGCTAAAATTGATTTTGAAGGACTAGTAGGAAGTTGTGTCCCAAAATAATGTATGCACAGATTGAAATTTACTCTCTGA-AACTTTTTAATACCGGAATTTTAGATGAAAGGGGCATTTCTCCGGAATATAATACCGTATCAATTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224702" ref_strand="+" ref_description="SGN-E224702 [cLEL-27-L17](-)">
      <seq>tatgtgctgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataacccagtatcaatttcaagtaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53721" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53421" g_stop="53334" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50871" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="438" r_length="351" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="441" polyA_stop="466"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E224702" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53421" e_stop="53334"/>
          <exon e_start="51221" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>TATGTGC-TGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAACCCAGTATCAATTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215385" ref_strand="+" ref_description="SGN-E215385 [cLEL-20-E12](-)">
      <seq>tgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatccagtatcaatttcaagtaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53719" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53419" g_stop="53334" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50871" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="437" r_length="351" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="440" polyA_stop="460"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E215385" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53419" e_stop="53334"/>
          <exon e_start="51221" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>TGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATCCAGTATCAATTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218592" ref_strand="+" ref_description="SGN-E218592 [cLEL-18-I4](-)">
      <seq>aaccgatggatcatggataaccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatacagtatccatttcnagtaaaaaaangatnaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="51522" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51221" g_stop="50871" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="356" r_length="351" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="371" polyA_stop="382"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E218592" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51221" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>ATGGATCATGGATAACCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCCATTTCNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224626" ref_strand="+" ref_description="SGN-E224626 [cLEL-27-L17](-)">
      <seq>atcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatacagtatcaatttcaagtaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="51517" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51217" g_stop="50871" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="350" polyA_stop="375"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E224626" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51217" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>ATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220142" ref_strand="+" ref_description="SGN-E220142 [cLEL-12-O1](-)">
      <seq>ggcaccaggggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttgaatttgagatgaaaggtgcatctctctgaaatataatacagtatcaattacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="51399" stop="50566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51102" g_stop="50871" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="233" polyA_stop="247"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E220142" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>232</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51102" e_stop="50871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</genome_strand>
        <mrna_strand>GGCACCAGGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700582" ref_strand="+" ref_description="SGN-E700582 [FA13CB09]">
      <seq>atccattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaaattcagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaaggtgtgtcccaaaataatgtatgcacagattgtaatttactctctgaaatctttttaatactgaaattgaaatgaaaggtgcatctctctgaaataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="50577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53334" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50877" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="1009" r_length="344" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E700582" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1010</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53334"/>
          <exon e_start="51221" e_stop="50877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAA</genome_strand>
        <mrna_strand>ATCCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAAATTCAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAAGGTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAAATCTTTTTAATAC-TGAAATTGAAATGAAAGGTGCATCTCTCTGAAATAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727466" ref_strand="+" ref_description="SGN-E727466 [LA14DB05]">
      <seq>cgattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaagttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatacttggaattgagatgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="50610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54000" g_stop="53334" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50909" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="980" r_length="313" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E727466" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>980</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54000" e_stop="53334"/>
          <exon e_start="51221" e_stop="50909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAG</genome_strand>
        <mrna_strand>CGATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAAGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGGAATTGAGATGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250384" ref_strand="+" ref_description="SGN-E250384 [cLEG-6-G20]">
      <seq>tgtgctatgaacatcgactgatgtaatggactcgcttggttgaccaagagctcgtctgattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggantcatgggggaattggccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtangaggttgtgtcccaaaataatgtatgcacagattgtaatttactctctgagatctttttaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53977" stop="50627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53677" g_stop="53334" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="53185" i_length="149">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.582" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53184" g_stop="53169" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="360" r_length="16" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53168" i_stop="53090" i_length="79">
            <donor d_prob="0.564" d_score="0.00"/>
            <acceptor a_prob="0.880" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53089" g_stop="53085" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="365" r_length="5" r_score="0.800"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53084" i_stop="51207" i_length="1878">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51206" g_stop="50927" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="645" r_length="280" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E250384" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53677" e_stop="53334"/>
          <exon e_start="53184" e_stop="53169"/>
          <exon e_start="53089" e_stop="53085"/>
          <exon e_start="51206" e_stop="50927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATAC</genome_strand>
        <mrna_strand>TGTGCTATGAACATCGACTGATGTAATGGACTCGCTTGGTTGACCAAGAGCTCGTCTGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG.....................................................................................................................................................ATGGANTCATGGGGGA...............................................................................ATTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTANGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703472" ref_strand="+" ref_description="SGN-E703472 [FA21CD07]">
      <seq>aatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaggactagtaggaggttgtgtcccaaaataatgtatgcccagaattgtatttactctctgagatctttttaataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54320" stop="50628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54020" g_stop="53334" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50931" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="977" r_length="290" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="978" polyA_stop="998"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E703472" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>978</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54020" e_stop="53334"/>
          <exon e_start="51221" e_stop="50931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTA</genome_strand>
        <mrna_strand>AATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTG-AGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCCCAGAATTGTATTTACTCTCTGAGATCTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707872" ref_strand="+" ref_description="SGN-E707872 [FA34AH02]">
      <seq>gtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgagggactagtaggaggttgtgtcccaaaataatgtatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54276" stop="50664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53976" g_stop="53334" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50964" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="901" r_length="258" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E707872" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>901</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53976" e_stop="53334"/>
          <exon e_start="51221" e_stop="50964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGC</genome_strand>
        <mrna_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAGGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701491" ref_strand="+" ref_description="SGN-E701491 [FA16AE05]">
      <seq>gactagttctctccagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaagactagtaggagggtgtgtcccaaaataatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54244" stop="50665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53944" g_stop="53334" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="620" r_length="611" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50965" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="877" r_length="257" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E701491" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53944" e_stop="53334"/>
          <exon e_start="51221" e_stop="50965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATG</genome_strand>
        <mrna_strand>TCTCCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAAGACTAGTAGGAGGGTGTGTCCCAAAATAATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707593" ref_strand="+" ref_description="SGN-E707593 [FA33BG08]">
      <seq>cttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggactagtaggaggttgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54309" stop="50681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54010" g_stop="53334" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50981" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="918" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E707593" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>918</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54010" e_stop="53334"/>
          <exon e_start="51221" e_stop="50981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGT</genome_strand>
        <mrna_strand>CTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E722763" ref_strand="+" ref_description="SGN-E722763 [FC18BA07]">
      <seq>gagtagcaacctatccaatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgcntagattgattttgaggactagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54335" stop="50692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54036" g_stop="53334" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50992" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="932" r_length="229" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E722763" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>933</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54036" e_stop="53334"/>
          <exon e_start="51221" e_stop="50992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTA</genome_strand>
        <mrna_strand>GAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCNTAGATTGATTTTG-AGGACTAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727439" ref_strand="+" ref_description="SGN-E727439 [LA14CG09]">
      <seq>cattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgctaagattgattttgaaggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54299" stop="50696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53999" g_stop="53334" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="50996" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="892" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E727439" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>892</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53999" e_stop="53334"/>
          <exon e_start="51221" e_stop="50996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACT</genome_strand>
        <mrna_strand>CATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453154" ref_strand="+" ref_description="SGN-E453154 [cSTS-19-G3]">
      <seq>ctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctagtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatttactcaggagcgcctggacgcagttaatgatgaattcaagctttatcgctgccatactattctgaactgttctcgtgcttgcccaaagggcttaaatcctgngaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgttccagtcttttctgctaagattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54024" stop="50708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53724" g_stop="53334" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51008" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="603" r_length="212" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E453154" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53724" e_stop="53334"/>
          <exon e_start="51221" e_stop="51008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGA</genome_strand>
        <mrna_strand>CTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTAGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATTTACTCAGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCATACTATTCTGAACTGTTCTCGTGCTTGCCCAAAGGGCTTAAATCCTGNGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTA--GTGTTCCAGTCTTTTCTGCTAAGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708518" ref_strand="+" ref_description="SGN-E708518 [FA36AA03]">
      <seq>ctccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54315" stop="50716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54015" g_stop="53334" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51016" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="888" r_length="206" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E708518" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>888</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54015" e_stop="53334"/>
          <exon e_start="51221" e_stop="51016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCT</genome_strand>
        <mrna_strand>CTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703507" ref_strand="+" ref_description="SGN-E703507 [FA21CG09]">
      <seq>ctccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccggggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtggtccaatcttttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54315" stop="50718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54015" g_stop="53334" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51018" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="887" r_length="205" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E703507" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54015" e_stop="53334"/>
          <exon e_start="51221" e_stop="51018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCC-GGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTG</genome_strand>
        <mrna_strand>CTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGGTCCAATCTTTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701517" ref_strand="+" ref_description="SGN-E701517 [FA16AG09]">
      <seq>gaggcctctcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctggagatggcaccttgagcctgcagtgtagtgtgttccaatcttttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54295" stop="50718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53999" g_stop="53334" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51018" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="871" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E701517" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53999" e_stop="53334"/>
          <exon e_start="51221" e_stop="51018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCAT-TCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTG</genome_strand>
        <mrna_strand>GAGGCCTCTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700443" ref_strand="+" ref_description="SGN-E700443 [FA13AE10]">
      <seq>atcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagctgaagatggcaccttgagcctgcagtgtagtgtgttccaatcttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54319" stop="50719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54019" g_stop="53334" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51019" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="889" r_length="203" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E700443" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>889</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54019" e_stop="53334"/>
          <exon e_start="51221" e_stop="51019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCT</genome_strand>
        <mrna_strand>ATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGAAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556175" ref_strand="+" ref_description="SGN-E556175 [cTSD-2-K16]">
      <seq>atttctcgagtagcagcctatccaagcgctccgattttggtgttcattcattcttctatggcgacgagtttaatccgacgagcgatttctagggttcgatcatcagcaccggcggagaggctactcgtggccagatctcacgcttcggactcccaagcacagaacggagaatctcaggctaagtctcatatcatttcgaatgtaccgatggactccagacaacccatggaaacctgagctcaaagaatacaatatcgatctgaaggagatgcggacctatggtgttagatgcgctgatctcaatcaagaatgaaatgtgaccctacacttgccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgctttgccaaagggattaaatcccgggaagcatattcagaacatcaagaagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54342" stop="50765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54043" g_stop="53334" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="713" r_length="713" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51065" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="870" r_length="157" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E556175" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54043" e_stop="53334"/>
          <exon e_start="51221" e_stop="51065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAA-TCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGA-ATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAAT-TGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTG</genome_strand>
        <mrna_strand>ATTTCTCGAGTAGCAGCCTATCCAAGCGCTCCGATTTTGGTGTTCATTCATTCTTCTATGGCGACGAGTTTAATCCGACGAGCGATTTCTAGGGTTCGATCATCAGCACCGGCGGAGAGGCTACTCGTGGCCAGATCTCACGCTTCGGACTCCCAAGCACAGAACGGAGAATCTCAGGCTAAGTCTCATATCATTTCGAATGTACCGATGGACTCCAGACAACCCATGGAAACCTGAGCTCAAAGAATACAATATCGATCTGAAGGAGATGCGGACCTATGGTGTTAGATGCGCTGATCTCAATCAAGAATGAAATGTGACCCTACACTTGCCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTTGCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709913" ref_strand="+" ref_description="SGN-E709913 [FA53CE08]">
      <seq>cgatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaatttcagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaagaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54321" stop="50767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54021" g_stop="53334" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="688" r_length="688" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51067" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="843" r_length="155" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E709913" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54021" e_stop="53334"/>
          <exon e_start="51221" e_stop="51067"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGC</genome_strand>
        <mrna_strand>CGATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTTCAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277000" ref_strand="+" ref_description="SGN-E277000 [cLEN-22-F18]">
      <seq>tcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatattcagaacatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54105" stop="50771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53805" g_stop="53334" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51071" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="623" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E277000" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53805" e_stop="53334"/>
          <exon e_start="51221" e_stop="51071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAG</genome_strand>
        <mrna_strand>TCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604710" ref_strand="+" ref_description="SGN-E604710 [74848]">
      <seq>gcgactggtttaattcgacgaagcgatttctaagcgaatcaggtcattcatcaccggcggcgaggctactcgtcgccagagctcacgcttccgacgcccaagcgccgcaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaatttgatcctacacttactttcaggagatcctgcagagaagggatctgtgggtcctgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatttacttcaggagcgcctggacgcagttaactgatgaattccaagctttatcgctgccatgtattctgaactgttctcgtgcttgcccaaaagggtttaaatcctgggaaagacatattcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54283" stop="50779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53983" g_stop="53334" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51079" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="804" r_length="148" r_score="0.860"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E604710" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53983" e_stop="53334"/>
          <exon e_start="51221" e_stop="51079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGACTAGTTTAATCCGACG-AGCGATTTCT-AG-GGTTCA-GTCAT-CAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAA-TTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATAC-TCAGGAGCGCCTGGATGCAGTTAA-TGACGAATT-CAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCC-AAAGGGATTAAATCCCGGG-AAG-CATATTCAGA</genome_strand>
        <mrna_strand>GCGACTGGTTTAATTCGACGAAGCGATTTCTAAGCGAATCAGGTCATTCATCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACGCCCAAGCGCCGCAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTTGATCCTACACTTACTTTCAGGAGATCCTGCAGAGAAGGGATCTGTGGGTCCTGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATTTACTTCAGGAGCGCCTGGACGCAGTTAACTGATGAATTCCAAGCTTTATCGCTGCCAT-GTATTCTGAACTGTTCTCGTGCTTGCCCAAAAGGGTTTAAATCCTGGGAAAGACATATTCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697265" ref_strand="+" ref_description="SGN-E697265 [FA02AB09]">
      <seq>cgattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaaggggataaatcccgggaagcatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="50783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54000" g_stop="53334" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51083" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="806" r_length="139" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E697265" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54000" e_stop="53334"/>
          <exon e_start="51221" e_stop="51083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATT</genome_strand>
        <mrna_strand>CGATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGGATAAATCCCGGGAAGCATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730832" ref_strand="+" ref_description="SGN-E730832 [LA25BD03]">
      <seq>actctctccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgggaagcatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54320" stop="50784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54020" g_stop="53334" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51084" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="825" r_length="138" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E730832" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54020" e_stop="53334"/>
          <exon e_start="51221" e_stop="51084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATAT</genome_strand>
        <mrna_strand>ACTCTCTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719602" ref_strand="+" ref_description="SGN-E719602 [FC08BD05]">
      <seq>tcggccgaattgagcaacctatccaatccctctgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgcttgcccaaagggattaaatcccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54335" stop="50793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54030" g_stop="53334" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="711" r_length="697" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51093" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="840" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E719602" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54030" e_stop="53334"/>
          <exon e_start="51221" e_stop="51093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGG</genome_strand>
        <mrna_strand>CAACCTATCCAATCCCTCTGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573258" ref_strand="+" ref_description="SGN-E573258 [32540]">
      <seq>caatggcgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgactcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggaaataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagncgtgatgaatttactcaggagcgcctggacgcagttaatgatgaattcaagctttatcgntgccatactattctgaactggtctcgtgcttgcccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54288" stop="50809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53988" g_stop="53334" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51109" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="768" r_length="113" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E573258" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53988" e_stop="53334"/>
          <exon e_start="51221" e_stop="51109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAA</genome_strand>
        <mrna_strand>CAATGGCGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGACTCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAAATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGNCGTGATGAATTTACTCAGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGNTGCCATACTATTCTGAACTGGTCTCGTGCTTGCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253795" ref_strand="+" ref_description="SGN-E253795 [cLEG-28-A12]">
      <seq>aaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54147" stop="50817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53847" g_stop="53334" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51117" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="619" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E253795" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53847" e_stop="53334"/>
          <exon e_start="51221" e_stop="51117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGC</genome_strand>
        <mrna_strand>AAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E722071" ref_strand="+" ref_description="SGN-E722071 [FC16AE01]">
      <seq>gggcgattggcggccaatcggccgaattgagcaacctatccaatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54335" stop="50821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54030" g_stop="53334" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="728" r_length="697" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51121" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="829" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E722071" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54030" e_stop="53334"/>
          <exon e_start="51221" e_stop="51121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTC</genome_strand>
        <mrna_strand>CAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697828" ref_strand="+" ref_description="SGN-E697828 [FA04BF05]">
      <seq>attcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctgaattgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54302" stop="50822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54002" g_stop="53334" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51122" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="769" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E697828" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54002" e_stop="53334"/>
          <exon e_start="51221" e_stop="51122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCT</genome_strand>
        <mrna_strand>ATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451407" ref_strand="+" ref_description="SGN-E451407 [cSTS-12-N5]">
      <seq>gtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgaatcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatttactcangagcgcctggacgcagttaatgatgaattcaagctttatcgctgccatactattctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54276" stop="50829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53976" g_stop="53334" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51129" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="736" r_length="93" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E451407" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53976" e_stop="53334"/>
          <exon e_start="51221" e_stop="51129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAA</genome_strand>
        <mrna_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGAATCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATTTACTCANGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCATACTATTCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261619" ref_strand="+" ref_description="SGN-E261619 [cLEG-57-N18]">
      <seq>tttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctgccatactattctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54308" stop="50830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54008" g_stop="53334" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51130" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="767" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E261619" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54008" e_stop="53334"/>
          <exon e_start="51221" e_stop="51130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGA</genome_strand>
        <mrna_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487101" ref_strand="+" ref_description="SGN-E487101 [cSTE-24-A18]">
      <seq>attcattcatcaatggcgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgactcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggaaataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatngatttactcaggagcgcctggacgcagttaatgatgaattcaagctttatcgctgccatactattctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="50830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53334" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51130" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="757" r_length="92" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E487101" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53334"/>
          <exon e_start="51221" e_stop="51130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGA</genome_strand>
        <mrna_strand>ATTCATTCATCAATGGCGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGACTCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAAATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATNGATTTACTCAGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCATACTATTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331988" ref_strand="+" ref_description="SGN-E331988 [cTOD-16-J13]">
      <seq>cgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggatgcagttaatgacgaattcaagctttatcgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54312" stop="50844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54012" g_stop="53334" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51144" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="680" r_stop="757" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E331988" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54012" e_stop="53334"/>
          <exon e_start="51221" e_stop="51144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTG</genome_strand>
        <mrna_strand>CGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237584" ref_strand="+" ref_description="SGN-E237584 [cLED-19-L16]">
      <seq>caaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtcccgctgcactcctccatgccaaccgatggatcatggatagccgtgatgaatatactcaggagcgcctggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54095" stop="50876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53795" g_stop="53334" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51176" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="508" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E237584" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53795" e_stop="53334"/>
          <exon e_start="51221" e_stop="51176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGAT</genome_strand>
        <mrna_strand>CAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747600" ref_strand="+" ref_description="SGN-E747600 [GI|5669040]">
      <seq>gcacgagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctactggtggaatcctgagtcttatcttggtccgctgcactcctgccatgccaaccgatggatcatggatagccgtgatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="53766" stop="50897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53466" g_stop="53334" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51221" g_stop="51197" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="158" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E747600" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>158</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53466" e_stop="53334"/>
          <exon e_start="51221" e_stop="51197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCT-CCATGCCAACCGGTAATATTTGTTTGTTATTATCATGTCAAGCTCTTCCTCTTTTGCATTTACTCTTTATTGATGTGCTGTAGTTTGTTTGGTCGTTTGGATCATATATCAAATTAAATACATCTTTAATTGGTGGATAGCGTTACCCCGAACCTATGCAGCTGTGTTGGTGGGGAGGTAGAAAGATACCTATAAACAATAAACATTTAACTTTTCTGGAAGTGCAGCAAATATATGGTACTTATAAATATAACAGGTTGGGCCATAAAAATATTTGAATTGATTGTATCAGATTAAGAACGCCGTGTGCCTTTCAGATATGAAATGAATCTCATTTCCGTGAGCTGAAACACTATCCAACTTCTTGTAGAAGATGGATCAAAGAAAAAACTTTTTGTAGAAGTTTGATGAATCATATGCTGAAACGTCTTATTTTATGGTAAAACCGTGCAATTTCCATGGTAGTTCTGGTAATCTTATTCTGAGTTGTCATTGGACAACTTTGAAACATTAATTTCTCATCTTACTAATCCCTAATTGGTTCATTAATTTGTACTTGTTTCTAACCTTTGTCATCTTTAATTTGATTCAAAACTGAAGATATACGTCCAAAATCTCATTTTAGACAATACATCTTTCAGCTTTTTGAATGCCGTGTGGTTAATTTTTTTGCTCTGCTGTCCTCCATAAAAAATCTAACTAATGTGCCAAGAATAGTTAGGTTTTACTCTCCTTTGCATTAACATTATACACGTCTCTTTCATTCCTTCTGCTGCCTGCACCACCAATTGACAACTAACTGTCCTTCTTGGACCATTCCGCTCCTATTGTGCTGATCCTTTCTCTCTAGAACAATCAGTTTTATAACTCTCATACTAGTTGTAGGGGTAGCCTACATTATGTCCTTTGGGTGCTCAAACACATACTAGTGGTTAATTGTCTGTGTTTTTATAGGAAATTAATTATATTTTGTAAATAGAGGCACAGTGAACACCCAAAGCACATGAGGGTTTGGGTGCACTGGTTTAGAGGGCAGAGGAAAGGTCACTGCATATATTGTGTCTGGGATCAATCTAAGTATTAACCGGCGTTTGTTTTTATGCATCTTCCTTTGAATGTTTTACGCTTATCTATTCTTCTTGTTTCCTTGTTACTGAATTCATACTTCTTTGTTCCTTCTATTTTTTACCTTATTAACTTTTTCCCTTTCTTTTTCTGTGTTTTTGCTTATCCATATTTCTTTTTTCCTTATTACTGTATATGAATGGGAGAATCCTACAAATGAAGTACTCTATGCAGTCGATTTCGTTTTGTTCTTTTCAAATATTGAATCATATCCGATGGGTATGATGGTTGATTTTTAAAATTTAAAACCAAATCAAATCAAGTCAAAGAATATGTCAATTTTTGTTACACATCAATTCAGTTTAGTTTTCTTTTTGGTTTGATTTTTTTAATTTTCTGGAACACTTCTATTTGTAATGATAATATTCATTATGTTTTTTTGACTTTCTCCACTAAATCACCTTAAAATTTCAAGTGTGTCGCAACCTACATTCAAAGGCATTGACTATCATGATACTAAAATCTTAGGGCCACCACTGATCAGCTTGTAAGGTTCAAAGACAATAGTAGTGTTAGAAGTCCTTTGCTATTCTTTCTCAGTGTGGGAATTACATGCAAGGATGGAAAAAGTTCAAATCACACCCTGGGCGAGTCGTCATTCAAAGGAAAAAAAGAAATTGATAGGAAAAGTAGATGAAAGGAGGACCTTTTTCTATTCAGTTCTACAAACCTGGGGATATATATTATTATGTCAAAGGGAGTATTAGAGGAATGCTGTTGCCTGAGGCCAAATGCTAGAGATGTTTTCGGTTAACATCTTGTCCAAACGGCTTTTGGACTTGTATGACCGACTTGCTTAGAGATGTAGGGCATTATTTACCTAGGTCAATTGCATGATGAGGGAGTAAGAGTTTTGGATTTCCGAAATTTCAGTACTTGCCTTGATTTTCTAGAGTTTTGGATTGTTTATAAGAAGTTCTACCCCATTAACCCTACTATCCATTATTCCCATCCTTGCGATATATTTAACGGAGGCTTATCTCTTGTATTTAAATGTAGATGGATCATGGATAGCCGTGATGAA</genome_strand>
        <mrna_strand>GCACGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGT-CCGCTGCACTCCTGCCATGCCAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576979" ref_strand="+" ref_description="SGN-E576979 [31719]">
      <seq>gtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagcaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaacgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactggtggaatccagagtcttatcttggtcccgctgcactcctccatggcaaccgatggatcattggatagcgtgatgaatttactcaagagcgctggacgcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54276" stop="53032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53976" g_stop="53334" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E576979" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53976" e_stop="53334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG</genome_strand>
        <mrna_strand>GTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGCAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAACGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTGGTGGAATCCAGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGGCAACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574669" ref_strand="+" ref_description="SGN-E574669 [34173]">
      <seq>gtttttggtttcccacaaggtattcattcatcaatggctgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagcaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaacgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacaatcatgcctagctactggtggaatccagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="53071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53371" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="650" r_length="629" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E574669" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGC-GACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCAC-ATCATGTCCTAGCTACTGGTGGAATCCTGAGT</genome_strand>
        <mrna_strand>ATTCATTCATCAATGGCTGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGCAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAACGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACAATCATG-CCTAGCTACTGGTGGAATCCAGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412854" ref_strand="+" ref_description="SGN-E412854 [STM-16-N14]">
      <seq>cgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgactcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggaaataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcatgccctagctactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54282" stop="53085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53982" g_stop="53385" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E412854" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53982" e_stop="53385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTG</genome_strand>
        <mrna_strand>CGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGACTCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAAATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCATGCCCTAGCTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240649" ref_strand="+" ref_description="SGN-E240649 [cLED-21-P12]">
      <seq>tcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgtgaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcatgtcctagctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54159" stop="53086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53859" g_stop="53386" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E240649" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53859" e_stop="53386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACT</genome_strand>
        <mrna_strand>TCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGTGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602381" ref_strand="+" ref_description="SGN-E602381 [55360]">
      <seq>actccttctttggtttcccaaggtattcattcatcaatggcgactggtttaattcgacgagcgatttctaggattcagtcatcatcaccggcggcgaggctactcgtcgccagagctcacgcttccgacgcccaagcgccgcaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgatcctacacttactttcaggagatcctgcagagaagggatctgtgggtcctgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtcatcctatgtgcttgctgtagcacatcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="53097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53396" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="628" r_length="604" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E602381" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGT-ATTCTATGTGCTTGCTGTAGCACATCATGT</genome_strand>
        <mrna_strand>ATTCATTCATCAATGGCGACTGGTTTAATTCGACGAGCGATTTCTAGGATTCAGTCATCATCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACGCCCAAGCGCCGCAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGATCCTACACTTACTTTCAGGAGATCCTGCAGAGAAGGGATCTGTGGGTCCTGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTCATCCTATGTGCTTGCTGTAGCACATCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E441130" ref_strand="+" ref_description="SGN-E441130 [cSTA-29-C18]">
      <seq>cgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgaatcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatggaatgtacgagtgtattctatgtgcttgctgtagcacatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54282" stop="53098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53982" g_stop="53398" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E441130" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53982" e_stop="53398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCAT</genome_strand>
        <mrna_strand>CGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGAATCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGAATGTACGAGTGTATTCTATGTGCTTGCTGTAGCACATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259223" ref_strand="+" ref_description="SGN-E259223 [cLEG-43-F23]">
      <seq>tttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgcttgctgtagcacatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54275" stop="53098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53975" g_stop="53398" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E259223" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53975" e_stop="53398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCAT</genome_strand>
        <mrna_strand>TTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203801" ref_strand="+" ref_description="SGN-E203801 [cLEC-17-D8]">
      <seq>ttcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctaagttggatgggatgtacgaatgtattctatgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54293" stop="53115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53993" g_stop="53415" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E203801" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53993" e_stop="53415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGC</genome_strand>
        <mrna_strand>TTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310418" ref_strand="+" ref_description="SGN-E310418 [cTOA-10-A18]">
      <seq>gtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgttgagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgatagggctgagttggatgggatgtacgaatgtattctatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54311" stop="53116"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54011" g_stop="53416" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E310418" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54011" e_stop="53416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTG</genome_strand>
        <mrna_strand>GTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTTGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTGAGTTGGATGGGATGTACGAATGTATTCTATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268117" ref_strand="+" ref_description="SGN-E268117 [cLEI-15-O13]">
      <seq>ttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54290" stop="53155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53990" g_stop="53455" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E268117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53990" e_stop="53455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATA</genome_strand>
        <mrna_strand>TTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363872" ref_strand="+" ref_description="SGN-E363872 [cLPT-10-L14]">
      <seq>tcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaaacccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaaggagataccacagagcaagagcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54318" stop="53157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54018" g_stop="53457" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E363872" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54018" e_stop="53457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGA</genome_strand>
        <mrna_strand>TCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAACCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554701" ref_strand="+" ref_description="SGN-E554701 [cTSC-5-C18]">
      <seq>gaggctttctctagtagcaacctatccaatcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggcttaagaggaagacacctgcaccaacgcctgggaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54345" stop="53179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54047" g_stop="53479" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E554701" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E554701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54047" e_stop="53479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGG</genome_strand>
        <mrna_strand>GAGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363579" ref_strand="+" ref_description="SGN-E363579 [cLPP-3-O11]">
      <seq>tttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaaacccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgagccttggctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54310" stop="53212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54010" g_stop="53512" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E363579" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54010" e_stop="53512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTA</genome_strand>
        <mrna_strand>TTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAACCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408886" ref_strand="+" ref_description="SGN-E408886 [PPI-12-B23]">
      <seq>cttttttggtttcccacaaggtattcattcatcaatggcgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgaatcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="53217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53517" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="504" r_length="482" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E408886" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTG</genome_strand>
        <mrna_strand>ATTCATTCATCAATGGCGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGAATCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487257" ref_strand="+" ref_description="SGN-E487257 [cSTE-25-A7]">
      <seq>tggcgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgaatcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtgattaaggatctggtggtggatatgactaatttctataatcagtataagtctattgagccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54285" stop="53217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53985" g_stop="53517" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E487257" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53985" e_stop="53517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTG</genome_strand>
        <mrna_strand>TGGCGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGAATCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTGATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTATAAGTCTATTGAGCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363248" ref_strand="+" ref_description="SGN-E363248 [cLPP-4-A9]">
      <seq>ttcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaaacccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaagatctggtggtggatatgactaatttctataatcagtacaagtctattgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54301" stop="53221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54001" g_stop="53521" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E363248" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54001" e_stop="53521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGC</genome_strand>
        <mrna_strand>TTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAACCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAAGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207779" ref_strand="+" ref_description="SGN-E207779 [cLEC-32-O2]">
      <seq>tttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtctattgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54308" stop="53222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54008" g_stop="53522" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E207779" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54008" e_stop="53522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAG</genome_strand>
        <mrna_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201307" ref_strand="+" ref_description="SGN-E201307 [cLEC-4-G21]">
      <seq>tcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgactaatttctataatcagtacaagtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54318" stop="53227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54018" g_stop="53527" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E201307" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54018" e_stop="53527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTA</genome_strand>
        <mrna_strand>TCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314340" ref_strand="+" ref_description="SGN-E314340 [cTOA-21-N5]">
      <seq>atcactccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttacccttcaggagatcctgtagagaaaggatctgtgggtcatgtgctatgaacatcgacggatgtaatggactcgcttgttttgaccaagatctcgtcggatttctgaatcgacgatttacgcccgttgccacatatgtttgtcatttaagatctgggggggggatatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54319" stop="53253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54019" g_stop="53553" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E314340" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54019" e_stop="53553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACC-TTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTG-TTTGACCAAGATCTCGTCGGA-TTCTGAATCGACGA-TTACG-CCGTTGCCACATATGTTTGTCATTAAGGATCT-GGTGGTGGATATGAC</genome_strand>
        <mrna_strand>ATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCCTTCAGGAGATCCTGTAGAGAAAGGATCTGTGGGTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTTGACCAAGATCTCGTCGGATTTCTGAATCGACGATTTACGCCCGTTGCCACATATGTTTGTCATTTAAGATCTGGGGGGGGGATATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376517" ref_strand="+" ref_description="SGN-E376517 [TUS-17-D15]">
      <seq>tttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtggatatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54308" stop="53253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54008" g_stop="53553" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E376517" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54008" e_stop="53553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGAC</genome_strand>
        <mrna_strand>TTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265025" ref_strand="+" ref_description="SGN-E265025 [cLEI-2-I21]">
      <seq>tttttggtattcattcattcttcaatggcgactagtttaatccgacgagcggtttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtctgattctgaatcgacgattacgccgttgccacatatgtttgtcaattaaggatctggtggtggatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54310" stop="53255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54010" g_stop="53555" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E265025" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54010" e_stop="53555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTC-ATTAAGGATCTGGTGGTGGATATG</genome_strand>
        <mrna_strand>TTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGGTTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCTGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCAATTAAGGATCTGGTGGTGGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274407" ref_strand="+" ref_description="SGN-E274407 [cLEN-19-H3]">
      <seq>attcattctttattggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgtttgtcattaaggatctggtggtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="53259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53559" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E274407" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGA</genome_strand>
        <mrna_strand>ATTCATTCTTTATTGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471279" ref_strand="+" ref_description="SGN-E471279 [cSTB-23-M20]">
      <seq>ttggtttcccacaaggtattcattcatcaatggcgactggtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgctaccgactcccaagcacaacaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtgggtcctgtgctatgaatatcgacggatgtaatggactcgcttgtttgaccaagatctcgtcggattctgaatcgacgattacgccgttgccacatatgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54298" stop="53282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53998" g_stop="53582" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="434" r_length="417" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E471279" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53998" e_stop="53582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTT</genome_strand>
        <mrna_strand>ATTCATTCATCAATGGCGACTGGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTACCGACTCCCAAGCACAACAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGGTCCTGTGCTATGAATATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363651" ref_strand="+" ref_description="SGN-E363651 [cLPP-3-H21]">
      <seq>tccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagccgatttctagggttcagtcatcagcacccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcccagaaggtagaatctaaacccaatctcaagtcatttcaaatttacccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgccctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgcttgtttgacccagatctcgtcggattctgaatcgacgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54314" stop="53302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54014" g_stop="53602" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E363651" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54014" e_stop="53602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAG-CGATTTCTAGGGTTCAGTCATCAGCAC-CGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTA-CCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTA</genome_strand>
        <mrna_strand>TCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCCGATTTCTAGGGTTCAGTCATCAGCACCCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCCCAGAAGGTAGAATCTAAACCCAATCTCAAGTCATTTCAAATTTACCCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCCCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCCAGATCTCGTCGGATTCTGAATCGACGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583346" ref_strand="+" ref_description="SGN-E583346 [9167]">
      <seq>tggacgagcgatttctaggattcagtcatcatcaccggcggcgaggctactcgtcgccagagctcacgcttccgacgcccaagcgccgcaggtagaatctaagcccaatctcaagtcatttcaaatttaccgatggactccagacaacccaggggaaacccgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcagaatcaagaatgaaattgatcctacacttactttcaggagatcctgccgagaagggatctgtgggtcctgtgctatgaacatcgacggatgtaatggacgtcgcttgtatgaccaagatctcgtcggattctgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54267" stop="53311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53969" g_stop="53611" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E583346" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53969" e_stop="53611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCA-GGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGAC-TCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAAT</genome_strand>
        <mrna_strand>TGGACGAGCGATTTCTAGGATTCAGTCATCATCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACGCCCAAGCGCCGCAGGTAGAATCTAAGCCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGGAAACCCGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAGAATCAAGAATGAAATTGATCCTACACTTACTTTCAGGAGATCCTGCCGAGAAGGGATCTGTGGGTCCTGTGCTATGAACATCGACGGATGTAATGGACGTCGCTTGTATGACCAAGATCTCGTCGGATTCTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323754" ref_strand="+" ref_description="SGN-E323754 [cTOC-5-H11]">
      <seq>gtttttggtattcattcattcgtcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatgaacatcgacggatgtaatggactcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54311" stop="53343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54011" g_stop="53643" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E323754" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54011" e_stop="53643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGC</genome_strand>
        <mrna_strand>GTTTTTGGTATTCATTCATTCGTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709254" ref_strand="+" ref_description="SGN-E709254 [FA51AF07]">
      <seq>aatctaagcctaatctcaaatcatttcacatttaccgatggactccagacaacccacggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttaccttcaggagatcctgtagagaagggatctgtggttcatgtgctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54174" stop="53369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53874" g_stop="53669" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E709254" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>206</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53874" e_stop="53669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATG</genome_strand>
        <mrna_strand>AATCTAAGCCTAATCTCAAATCATTTCACATTTACCGATGGACTCCAGACAACCCACGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362092" ref_strand="+" ref_description="SGN-E362092 [cLPP-11-A2]">
      <seq>tccgtttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaaacccaatctcaagtcatttcaaatttaccgatggactccagacaacccagggaaacctgagctcaaagaatacaaaatcgatctgaaggaatgcggacctatggttttagatgcgctaatcaaaatcaagaatgaaattgaccctacacttacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54314" stop="53413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54014" g_stop="53713" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E362092" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>302</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54014" e_stop="53713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCT</genome_strand>
        <mrna_strand>TCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAACCCAATCTCAAGTCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213336" ref_strand="+" ref_description="SGN-E213336 [cLEC-71-N6]">
      <seq>aataacacaacaccgaagatattatttatgtatttcagtaaaaacgatgctgaaaaaagcgaaaagcgattgatccaggacgcgagccaaccacgttacttagaaataatctaacgattacaaatccgacacgtcatcaatattcgacacagatcccaactcattcacggcaaagcttattagtcgacgaaacaataaatacaacctcaaatatttttcacatgtaccgaactaccccttccacatccacccattctcaaacacaaaaccacccaatgtcggtttcttttacatgcctatttccgtcatttaataccaatatttttctttaatataaaatccccctctattggctttctctagtagcaacctatccaatcactccgnttttggtattcattcattcttcaatggcgactagtttaatccgacgagcgatttctagggttcagtcatcagcaccggcggcgaggctactcgtcgccagagctcacgcttccgactcccaagcacagaaggtagaatctaagcctaatctcaaatcatttcaaatttaccgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="54696" stop="53535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54396" g_stop="53835" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E213336" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54396" e_stop="53835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATG</genome_strand>
        <mrna_strand>AATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGNTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545321" ref_strand="+" ref_description="SGN-E545321 [TUS-68-B19](-)">
      <seq>cttcctttcatcaattaattacaccaaaaatatcatattcatgaattcccaagagaaaggtcggccattgccgaaattcggggagtgggatgtaaataatccagcctctgcagatggattcactgtcatatttgctaaggctagagatgacaagaaggctaatagcagtgcagcaccaacacaaacgcccagaaatgactatgcatatggacaaccgaacccttatcagcaagaaaccaggaaaagaaggttttgctgtttctgaaagcaggatgtttcggtggctgtgaattatgagactttaaggccatcgggaattgcagttcaagtctgccaagtgggagaatgagtgctgcaccttctgtttgtattttactctattgattatttgttgcatataaggttttcttcaactctctctactctctactccccaatatatgtatgtatgtattcaggggaatcgtcgaccaacacacgctaatgtattctactgaaaagaaaaaaaaaaaaaaaaaaactcgaggggggcccggtccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="57380" stop="55225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57080" g_stop="57032" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56521" g_stop="56330" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="241" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55789" g_stop="55530" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="500" r_length="259" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="502" polyA_stop="521"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E545321" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57080" e_stop="57032"/>
          <exon e_start="56521" e_stop="56330"/>
          <exon e_start="55789" e_stop="55530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCCGTAAGTTTCTCTCTCTTCTAGTTTTTTTTTTTTAATTCTGAATTCGTTCTGCCTCTAAACGTAAAGGTTCTTGAATTTGTGCTATTCTAAAATATAATGAGATTCATGAAATCTGTAAAAATCCAAAACCCCGACGCCTCACATTTCTCTTTTAATGAATTAGACGTTACGAAAAAATGATTGTTTTGTTCCTATATGGCATATGTCTTATTGGCTACGACCAACCTTTTCAATCGGTTTGCTGCATTTGATTTCACCAACAAGTTTTTGTGTATTTTTTTTTATAGCACGATGGAGCATGTGTTAGTTGATAATCCCTTTTACATTTCGGTTTAACAAAGGTATTTTGTTGATTGTTCATACAAAACATAAAGATTGGAAGAAAATCACACGTTAGAGTTGTTTGACTTTATGGCAAGTTTAAGAAAAAGAAGAGAAAACCTGTTATGCCATTTGTACAAGTTTAGCATGTTATTGAAAACTCTGCTTTTTGACATTGGCAATTTCTAGCAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGGGTATATCCATCCCCTCAACTACTAAATCTTACTAATACTTCTTCTTTTTGTGCTACAAGCATTCAAGAAATTACATTTTGGAGTTAAAGTCTAGTCGTTGTTATTTTCTTACTATCATATGTTGTTGTTACTGTCATAAATGATGTGTTTTTGCTTTCCTTGTGCCGAACCTGCCAAGGGAGGGGTAAGGTCACCACTTGTGGGACTATACTGCGTAATTTGTTGTTGTTTAGAGTTTGGTTCTAGGTACTAGTCTGTCTTTTGAGATTCAGAGAAGTATTATTCTAGATTAGAGTTGTCTTGTGGTGACATGATATGTGTTTGAATAAGGAAACTAGAACCAGATCTAACTGAAACTGATTATATTGTCCACAAAAGAAAAATTAACAAGTAGCGGTTTTGTTGGAGAGTTCATGTTGAATGTTTGTTAGGAGACTTTGTAATCTTGTTAGTAGGAAATGTAAAGAATTTATTCATGTTCATAGAACAGTACTCAAGACCCCAACTAGATTCTAATATGTAGTATTTGTATATATGCAGAAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAA</genome_strand>
        <mrna_strand>CTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTAC-TGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545322" ref_strand="+" ref_description="SGN-E545322 [TUS-68-B19]">
      <seq>cttcctttcatcaattaattacaccaaaaatatcatattcatgaattcccaagagaaaggtcggccattgccgaaattcggggagtgggatgtaaataatccagcctctgcagatggattcactgtcatatttgctaaggctagagatgacaagaaggctaatagcagtgcagcaccaacacaaacgcccagaaatgactatgcatatggacaaccgaacccttatcagcaagaaaccaggaaaagaaggttttgctgtttctgaaagcaggatgtttcggtggctgtgaattatgagactttaaggccatcgggaattgcagttcaagtctgccaagtgggagaatgagtgctgcaccttctgtttgtattttactctattgattatttgttgcatataaggttttcttcaactctctctactctctactccccaatatatgtatgtatgtattcaggggaatcgtcgaccaacacacgctaatgtattctacttgaaaagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="57380" stop="55225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57080" g_stop="57032" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56521" g_stop="56330" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="241" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55789" g_stop="55530" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="501" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="503" polyA_stop="513"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E545322" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57080" e_stop="57032"/>
          <exon e_start="56521" e_stop="56330"/>
          <exon e_start="55789" e_stop="55530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCCGTAAGTTTCTCTCTCTTCTAGTTTTTTTTTTTTAATTCTGAATTCGTTCTGCCTCTAAACGTAAAGGTTCTTGAATTTGTGCTATTCTAAAATATAATGAGATTCATGAAATCTGTAAAAATCCAAAACCCCGACGCCTCACATTTCTCTTTTAATGAATTAGACGTTACGAAAAAATGATTGTTTTGTTCCTATATGGCATATGTCTTATTGGCTACGACCAACCTTTTCAATCGGTTTGCTGCATTTGATTTCACCAACAAGTTTTTGTGTATTTTTTTTTATAGCACGATGGAGCATGTGTTAGTTGATAATCCCTTTTACATTTCGGTTTAACAAAGGTATTTTGTTGATTGTTCATACAAAACATAAAGATTGGAAGAAAATCACACGTTAGAGTTGTTTGACTTTATGGCAAGTTTAAGAAAAAGAAGAGAAAACCTGTTATGCCATTTGTACAAGTTTAGCATGTTATTGAAAACTCTGCTTTTTGACATTGGCAATTTCTAGCAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGGGTATATCCATCCCCTCAACTACTAAATCTTACTAATACTTCTTCTTTTTGTGCTACAAGCATTCAAGAAATTACATTTTGGAGTTAAAGTCTAGTCGTTGTTATTTTCTTACTATCATATGTTGTTGTTACTGTCATAAATGATGTGTTTTTGCTTTCCTTGTGCCGAACCTGCCAAGGGAGGGGTAAGGTCACCACTTGTGGGACTATACTGCGTAATTTGTTGTTGTTTAGAGTTTGGTTCTAGGTACTAGTCTGTCTTTTGAGATTCAGAGAAGTATTATTCTAGATTAGAGTTGTCTTGTGGTGACATGATATGTGTTTGAATAAGGAAACTAGAACCAGATCTAACTGAAACTGATTATATTGTCCACAAAAGAAAAATTAACAAGTAGCGGTTTTGTTGGAGAGTTCATGTTGAATGTTTGTTAGGAGACTTTGTAATCTTGTTAGTAGGAAATGTAAAGAATTTATTCATGTTCATAGAACAGTACTCAAGACCCCAACTAGATTCTAATATGTAGTATTTGTATATATGCAGAAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAA</genome_strand>
        <mrna_strand>CTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364011" ref_strand="+" ref_description="SGN-E364011 [cLPP-16-B5]">
      <seq>ttctctcttcttcttcctttcatcaattaaattacaccaaaaatatcatattcatgaattctcaagagaaaggtcggccattgccgaaattcggggagtgggatgtaaataatccagcctcggcagatggattcactgtcatatttgctaaggctagagatgacaagaaggctaatagcagtgcagcaccaacacaaacgcccagaaatgactatgcatatggacaacctaacccttatcagcaagaaaccaggaaaaaaaggttttgctgtttctgaaagcaggatgtttcggtggctgtgaattatgagactttaaggccatcggatattgcagttcaagtctgccaagtgggagaatgagtgctgcaccttctgtttgtattttactctattgattattgttgcatataaggttttcttcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="57392" stop="55318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57092" g_stop="57032" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56521" g_stop="56330" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="254" r_length="192" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55789" g_stop="55629" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="414" r_length="160" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="424" polyA_stop="438"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E364011" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364011" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57092" e_stop="57032"/>
          <exon e_start="56521" e_stop="56330"/>
          <exon e_start="55789" e_stop="55629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTTCTTCTTCCTTTCATCAATT-AATTACACCAAAAATATCATATTCATGAATTCCGTAAGTTTCTCTCTCTTCTAGTTTTTTTTTTTTAATTCTGAATTCGTTCTGCCTCTAAACGTAAAGGTTCTTGAATTTGTGCTATTCTAAAATATAATGAGATTCATGAAATCTGTAAAAATCCAAAACCCCGACGCCTCACATTTCTCTTTTAATGAATTAGACGTTACGAAAAAATGATTGTTTTGTTCCTATATGGCATATGTCTTATTGGCTACGACCAACCTTTTCAATCGGTTTGCTGCATTTGATTTCACCAACAAGTTTTTGTGTATTTTTTTTTATAGCACGATGGAGCATGTGTTAGTTGATAATCCCTTTTACATTTCGGTTTAACAAAGGTATTTTGTTGATTGTTCATACAAAACATAAAGATTGGAAGAAAATCACACGTTAGAGTTGTTTGACTTTATGGCAAGTTTAAGAAAAAGAAGAGAAAACCTGTTATGCCATTTGTACAAGTTTAGCATGTTATTGAAAACTCTGCTTTTTGACATTGGCAATTTCTAGCAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGGGTATATCCATCCCCTCAACTACTAAATCTTACTAATACTTCTTCTTTTTGTGCTACAAGCATTCAAGAAATTACATTTTGGAGTTAAAGTCTAGTCGTTGTTATTTTCTTACTATCATATGTTGTTGTTACTGTCATAAATGATGTGTTTTTGCTTTCCTTGTGCCGAACCTGCCAAGGGAGGGGTAAGGTCACCACTTGTGGGACTATACTGCGTAATTTGTTGTTGTTTAGAGTTTGGTTCTAGGTACTAGTCTGTCTTTTGAGATTCAGAGAAGTATTATTCTAGATTAGAGTTGTCTTGTGGTGACATGATATGTGTTTGAATAAGGAAACTAGAACCAGATCTAACTGAAACTGATTATATTGTCCACAAAAGAAAAATTAACAAGTAGCGGTTTTGTTGGAGAGTTCATGTTGAATGTTTGTTAGGAGACTTTGTAATCTTGTTAGTAGGAAATGTAAAGAATTTATTCATGTTCATAGAACAGTACTCAAGACCCCAACTAGATTCTAATATGTAGTATTTGTATATATGCAGAAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAG</genome_strand>
        <mrna_strand>TTCTCTCTTCTTCTTCCTTTCATCAATTAAATTACACCAAAAATATCATATTCATGAATTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCGGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCTAACCCTTATCAGCAAGAAACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGATATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTA-TTGTTGCATATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311817" ref_strand="+" ref_description="SGN-E311817 [cLEZ-9-P21]">
      <seq>ttcctttcatcaattaattacaccaaaaatatcatattcatgaattcccaagagaaaggtcggccattgccgaaattcggggagtgggatgtaaataatccagcctctgcagatggattcactgtcatatttgctaaggctagagatgacaagaaggctaatagcagtgcagcaccaacacaaacgcccagaaatgactatgcatatggacaaccgaacccttatcagcaagaaaccaggaaaagaaggttttgctgtttctgaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="57379" stop="55463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57079" g_stop="57032" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56521" g_stop="56330" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="240" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55789" g_stop="55763" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="267" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E311817" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>267</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57079" e_stop="57032"/>
          <exon e_start="56521" e_stop="56330"/>
          <exon e_start="55789" e_stop="55763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCCGTAAGTTTCTCTCTCTTCTAGTTTTTTTTTTTTAATTCTGAATTCGTTCTGCCTCTAAACGTAAAGGTTCTTGAATTTGTGCTATTCTAAAATATAATGAGATTCATGAAATCTGTAAAAATCCAAAACCCCGACGCCTCACATTTCTCTTTTAATGAATTAGACGTTACGAAAAAATGATTGTTTTGTTCCTATATGGCATATGTCTTATTGGCTACGACCAACCTTTTCAATCGGTTTGCTGCATTTGATTTCACCAACAAGTTTTTGTGTATTTTTTTTTATAGCACGATGGAGCATGTGTTAGTTGATAATCCCTTTTACATTTCGGTTTAACAAAGGTATTTTGTTGATTGTTCATACAAAACATAAAGATTGGAAGAAAATCACACGTTAGAGTTGTTTGACTTTATGGCAAGTTTAAGAAAAAGAAGAGAAAACCTGTTATGCCATTTGTACAAGTTTAGCATGTTATTGAAAACTCTGCTTTTTGACATTGGCAATTTCTAGCAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGGGTATATCCATCCCCTCAACTACTAAATCTTACTAATACTTCTTCTTTTTGTGCTACAAGCATTCAAGAAATTACATTTTGGAGTTAAAGTCTAGTCGTTGTTATTTTCTTACTATCATATGTTGTTGTTACTGTCATAAATGATGTGTTTTTGCTTTCCTTGTGCCGAACCTGCCAAGGGAGGGGTAAGGTCACCACTTGTGGGACTATACTGCGTAATTTGTTGTTGTTTAGAGTTTGGTTCTAGGTACTAGTCTGTCTTTTGAGATTCAGAGAAGTATTATTCTAGATTAGAGTTGTCTTGTGGTGACATGATATGTGTTTGAATAAGGAAACTAGAACCAGATCTAACTGAAACTGATTATATTGTCCACAAAAGAAAAATTAACAAGTAGCGGTTTTGTTGGAGAGTTCATGTTGAATGTTTGTTAGGAGACTTTGTAATCTTGTTAGTAGGAAATGTAAAGAATTTATTCATGTTCATAGAACAGTACTCAAGACCCCAACTAGATTCTAATATGTAGTATTTGTATATATGCAGAAAAGAAGGTTTTGCTGTTTCTGAAAG</genome_strand>
        <mrna_strand>TTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGTTTTGCTGTTTCTGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204431" ref_strand="+" ref_description="SGN-E204431 [cLEC-13-H18]">
      <seq>ccagctgtgctgtgcccatacaagtgaattaatagactgctccaaacccatcgcgtgtaacactccaagattcaatctttagatctatacgcttctttatttatatataaaattatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62071" stop="63169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62371" g_stop="62869" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E204431" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62371" e_stop="62869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATG</genome_strand>
        <mrna_strand>CCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274312" ref_strand="+" ref_description="SGN-E274312 [cLEN-15-I3]">
      <seq>tgtgctgtgcccatacaagtgaattaatagactgctccaaacccatcgcgtgtaacactccaagattcaatctttagatctatacgcttctttatttatatataaaatgatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctatgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtgtctgaatcgattaagagctaaatgtggacagacccagatcaaaacagtcgttcgtgatttctctggtgatttggatgaaggggttgagaagattaaggagacaattgaaggattggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62076" stop="63211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62376" g_stop="62911" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="537" r_length="537" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E274312" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62376" e_stop="62911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAA-AGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATA</genome_strand>
        <mrna_strand>TGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATGATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTATGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTGTCTGAATCGATTAAGAGCTAAATGTGGACAGACCCAGATCAAAACAGTCGTTCGTGATTTCTCTGGTGATTTGGATGAAGGGGTTGAGAAGATTAAGGAGACAATTGAAGGATTGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456845" ref_strand="+" ref_description="SGN-E456845 [cSTS-30-P7]">
      <seq>aatgcccatacatgtgaattaatagactcgaaacccatcgtgtgtaacactccaagattcaatctttagatctatacgcttcttctttttttatatatatacttaatcttgttttcttgccaaactactgtttctgccattcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaaggggtttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62091" stop="63174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62381" g_stop="62874" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E456845" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E456845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62381" e_stop="62874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACG---CTTCTTTATTTATATATAAAATT-ATC--GTGTTC-T------CT--TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGG</genome_strand>
        <mrna_strand>AATGCCCATACATGTGAATTAATAGA---CTCGAAACCCATCGTGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTCTTTTTTTATATATATACTTAATCTTGTTTTCTTGCCAAACTACTGTTTCTGCCATTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGGTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476051" ref_strand="+" ref_description="SGN-E476051 [cSTB-43-M3]">
      <seq>gcccatacatgtgaattaatagactcggaacccatcttgggtagtaacactccaagattcaatctttagatctatacgcttctttttatatatacttaatcttgttttcttgccaaactactgtttctgccattcaaacatggagtcttgcatctaccaccagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62121" stop="63169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62384" g_stop="62869" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E476051" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62384" e_stop="62869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGT-GTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATA--TAAAATTATCGTGTT--C--TCT--TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATG</genome_strand>
        <mrna_strand>GCCCATACATGTGAATTAATAGACT-CGGAACCCATCTTGGGTAGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTTTATATATACTTAATCTTGTTTTCTTGCCAAACTACTGTTTCTGCCATTCAAACATGGAGTCTTGCATCTACCACCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591866" ref_strand="+" ref_description="SGN-E591866 [45587]">
      <seq>gaattaatagactcgaaacccatcgagtgtaacactccaagattcaatctttagatctatacgcttctttttatatatatacttaatcttgttttcttgccaaactactgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttagggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaatgctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattagatantggggttttgattaacaacgttggggtttcgtatccttatgctagatttttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62101" stop="63266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62396" g_stop="62966" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E591866" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E591866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62396" e_stop="62966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTC--TTTATTTATATA--TAAAATTATCGTGTT--C--TCT--TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTA-GGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCA</genome_strand>
        <mrna_strand>GAATTAATAGA---CTCGAAACCCATCGAGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTTTATATATATACTTAATCTTGTTTTCTTGCCAAACTACTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAATGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTAGATANTGGGGTTTTGATTAACAACGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313445" ref_strand="+" ref_description="SGN-E313445 [cTOA-13-O24]">
      <seq>gaattaatagactgctccaaacccatcgcgtgtaacactccaagattcaatctttagatctatacgcttctttatttatatataaaattatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62096" stop="63168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62396" g_stop="62868" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E313445" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62396" e_stop="62868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGAT</genome_strand>
        <mrna_strand>GAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267583" ref_strand="+" ref_description="SGN-E267583 [cLEI-8-B5]">
      <seq>ttagatctatacgcttctttatttatatataaaattatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62149" stop="63279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62449" g_stop="62979" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E267583" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62449" e_stop="62979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGAT</genome_strand>
        <mrna_strand>TTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265604" ref_strand="+" ref_description="SGN-E265604 [cLEI-14-G12]">
      <seq>ttatcgtgttctcttgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62183" stop="63311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62483" g_stop="63011" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E265604" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265604" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62483" e_stop="63011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGT</genome_strand>
        <mrna_strand>TTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604498" ref_strand="+" ref_description="SGN-E604498 [74634]">
      <seq>cttaatcttgttttcttgccaaactactgtttctgccattcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaaggggtttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaatattaaggagacaattgaaggattagatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctgtatgctgtttatgccgctactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaaatggcgtcaatcaaaagatcttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62193" stop="64764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62497" g_stop="63152" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="683" r_length="656" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="753" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64464" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="801" r_length="48" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E604498" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E604498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62497" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCA</genome_strand>
        <mrna_strand>TGTTTCTGCCATTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGGTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAATATTAAGGAGACAATTGAAGGATTAGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAACAAAAATGGCGTCAATCAAAAGATCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692707" ref_strand="+" ref_description="SGN-E692707 [LH_Ea09G17]">
      <seq>cgttaaagtgccgaattcggcacgaggtatacgcttctttactcttatataaaattatcgtgttttcttgccaaaccactgtttctgccactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttagtttagttctggtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggtcaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctcggatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62152" stop="64075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62497" g_stop="63152" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="735" r_length="656" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63774" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="736" r_stop="800" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E692707" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62497" e_stop="63152"/>
          <exon e_start="63710" e_stop="63774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAAT</genome_strand>
        <mrna_strand>TGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAGTTTAGTTCTGGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTCAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCGGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746033" ref_strand="+" ref_description="SGN-E746033 [GI|47105369]">
      <seq>gactcaaacatggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattcgaaggagagggcagctgaaggattccaggaagaaagaatagaaagcatctgctttacctcattccatatcttaaaagtttgattagtagacaattaatttccgtctctatttccaattgggtaatgctagttactgtaatgcaactagaagcttgattctgttcttactcattaaacaaggcctagtgttatttttgcaattttagttgtaggctgatcgaatcaagagcgttctaaaagaaattccaactcttaagatactgtttgtatttattctttgagtttgatgttgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62207" stop="69779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62506" g_stop="63152" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="717" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64940" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="1241" r_length="524" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E746033" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1241</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62506" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAGAATGAATTTTCTGTA</genome_strand>
        <mrna_strand>GACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297313" ref_strand="+" ref_description="SGN-E297313 [cLET-29-D18]">
      <seq>ggagtcttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaagagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62217" stop="63280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62517" g_stop="62980" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E297313" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62517" e_stop="62980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATA</genome_strand>
        <mrna_strand>GGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAAGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701066" ref_strand="+" ref_description="SGN-E701066 [FA14DG06]">
      <seq>cttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgaagcaaggtgcacaccctactggccccattctcttctggggggtgttctatgtccattgccagagtcgatggttgatgcttggcgtctgaacttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62222" stop="64919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62522" g_stop="63152" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="631" r_length="631" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="701" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64619" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="904" r_length="203" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E701066" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>904</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62522" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTG</genome_strand>
        <mrna_strand>CTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAAGCAAGGTGCACACCCTACTGGCCCCATTCTCTTCTGGGGGGTGTTCTATGTCCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E624014" ref_strand="+" ref_description="SGN-E624014 [89160]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaaggggtttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaatattaaggagacaattgaaggattagatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctgtatgctgtttatgccgctactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaaatggcgtcaatcaaaagatcttcattttttgttccctcgactgatggttatgctcggtctgccctgcgatggattggtcatgagccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="64828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="63152" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="700" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64528" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="812" r_length="112" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E624014" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAA</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGGTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAATATTAAGGAGACAATTGAAGGATTAGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAACAAAAATGGCGTCAATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGTCTGCCCTGCGATGGATTGGTCATGAGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328144" ref_strand="+" ref_description="SGN-E328144 [cTOC-21-A13]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="64042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="63152" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63742" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="663" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E328144" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="63152"/>
          <exon e_start="63710" e_stop="63742"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGT</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328655" ref_strand="+" ref_description="SGN-E328655 [cTOC-23-C7]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatatttggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="63455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="63152" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="631" r_length="631" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E328655" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="63152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATA-TTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358684" ref_strand="+" ref_description="SGN-E358684 [cLHT-22-N7]">
      <seq>ttgcatcttccatcttctcaaatcccagcctgtgtggctgcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgatcaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggagattggggttttgattaataatgttggggtttcgtatccttatgctagattttttcatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="63320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="63020" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E358684" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="63020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGAC</genome_strand>
        <mrna_strand>TTGCATCTTCCATCTTCTCAAATCCCAGCCTGTGTGGCTGCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATCAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGAGATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTTCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322035" ref_strand="+" ref_description="SGN-E322035 [cTOB-29-N10]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctaattcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcggtgatttctctggtgatttggatgaagggggtaagaagattaaggagacaaatgaangattggatattggggttttgattaataatgtnggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="63290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="62990" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E322035" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="62990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGC</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAATTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGGTGATTTCTCTGGTGATTTGGATGAAGGGGGTAAGAAGATTAAGGAGACAAATGAANGATTGGATATTGGGGTTTTGATTAATAATGTNGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358979" ref_strand="+" ref_description="SGN-E358979 [cLHT-24-D16]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtgtggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgatcaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggagattggggttttgattaataatgttggggtttcgtatccttatgctagattttttcatgaagtggatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="63278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="62978" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E358979" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="62978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGA</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTGTGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATCAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGAGATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTTCATGAAGTGGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325929" ref_strand="+" ref_description="SGN-E325929 [cTOC-12-O12]">
      <seq>ttgcatctaccatcagctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaagatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62223" stop="63216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62523" g_stop="62916" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E325929" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62523" e_stop="62916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGG</genome_strand>
        <mrna_strand>TTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAAGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277248" ref_strand="+" ref_description="SGN-E277248 [cLEL-3-E22](-)">
      <seq>atcttcttaaccccttcatccaaatcaccagagaaatcaacgacgactgttttgatctgggtctgtccatatttagctttaatcgattcagaaacatccttaagtttatcagggttacgacccacaagaactagattaagcccttttcgagctaattcaaaagcaaagcccttcccaataccatctgtaggtccagtaacaagtgcccatgacccatatttcttaagattcttagcaggtctgaggaaattgacatagacccatttgagaaagatgacggaaaagcacaagactttcaagaaacctaaagaaagaagcaaaagaagccataagggctgggatttgagctgatgctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="63185" stop="62225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62885" g_stop="62529" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E277248" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62885" e_stop="62529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCTTAACCCCTTCATCCAAATCACCAGAGAAATCAACGACGACTGTTTTGATCTGGGTCTGTCCATATTTAGCTTTAATCGATTCAGAAACATCCTTAAGTTTATCAGGGTTACGACCCACAAGAACTAGATTAAGCCCTTTTCGAGCTAATTCAAAAGCAAAGCCCTTCCCAATACCATCTGTAGGTCCAGTAACAAGTGCCCATGACCCATATTTCTTAAGATTCTTAGCAGGTCTGAGGAAATTGACATAGACCCATTTGAGAAAGATGACTGAAAAGCACAAGACTTTCAAGAAACCTAAAGAAAGAAGCAAAAGAAGCCATACAGGCTGGGATTTGAGCTGATGGTAG</genome_strand>
        <mrna_strand>ATCTTCTTAACCCCTTCATCCAAATCACCAGAGAAATCAACGACGACTGTTTTGATCTGGGTCTGTCCATATTTAGCTTTAATCGATTCAGAAACATCCTTAAGTTTATCAGGGTTACGACCCACAAGAACTAGATTAAGCCCTTTTCGAGCTAATTCAAAAGCAAAGCCCTTCCCAATACCATCTGTAGGTCCAGTAACAAGTGCCCATGACCCATATTTCTTAAGATTCTTAGCAGGTCTGAGGAAATTGACATAGACCCATTTGAGAAAGATGACGGAAAAGCACAAGACTTTCAAGAAACCTAAAGAAAGAAGCAAAAGAAGCCATAAGGGCTGGGATTTGAGCTGATGCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277239" ref_strand="+" ref_description="SGN-E277239 [cLEL-3-A22](-)">
      <seq>gttttgatatgggtctgtccatatttagctttaatcgattcagacacatccttaagtttatcagggttacgacccacaagaactagattaagcccttttcgagctaattcaaaagcaaagcccttcccaataccatctgtaggtccagtagcaagtgcccatgacccatatttcttaagattcttagcaggtctgaggaaattgacatagacccatttgagaaagatgaagaaggagcacaagactttcaagaaacctaacgaaagaagcaaaagaagccattatggctgggatttgagctgatgctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="63137" stop="62225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62837" g_stop="62529" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E277239" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62837" e_stop="62529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGATCTGGGTCTGTCCATATTTAGCTTTAATCGATTCAGAAACATCCTTAAGTTTATCAGGGTTACGACCCACAAGAACTAGATTAAGCCCTTTTCGAGCTAATTCAAAAGCAAAGCCCTTCCCAATACCATCTGTAGGTCCAGTAACAAGTGCCCATGACCCATATTTCTTAAGATTCTTAGCAGGTCTGAGGAAATTGACATAGACCCATTTGAGAAAGATGACTGAAAAGCACAAGACTTTCAAGAAACCTAAAGAAAGAAGCAAAAGAAGCCATACAGGCTGGGATTTGAGCTGATGGTAG</genome_strand>
        <mrna_strand>GTTTTGATATGGGTCTGTCCATATTTAGCTTTAATCGATTCAGACACATCCTTAAGTTTATCAGGGTTACGACCCACAAGAACTAGATTAAGCCCTTTTCGAGCTAATTCAAAAGCAAAGCCCTTCCCAATACCATCTGTAGGTCCAGTAGCAAGTGCCCATGACCCATATTTCTTAAGATTCTTAGCAGGTCTGAGGAAATTGACATAGACCCATTTGAGAAAGATGAAGAAGGAGCACAAGACTTTCAAGAAACCTAACGAAAGAAGCAAAAGAAGCCATTATGGCTGGGATTTGAGCTGATGCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E336727" ref_strand="+" ref_description="SGN-E336727 [cTOE-5-O22]">
      <seq>agctcaaatcccagcctgtatggcttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62237" stop="63165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62537" g_stop="62865" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E336727" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62537" e_stop="62865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTG</genome_strand>
        <mrna_strand>AGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568332" ref_strand="+" ref_description="SGN-E568332 [12598]">
      <seq>gcttcttttgcttctttctttagtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaatgctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattagatattggggttttgattaacaacgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaaaggggactacaaaggtttactcaagctgttttgcctggtatgattcagagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62259" stop="63364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62559" g_stop="63064" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E568332" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E568332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62559" e_stop="63064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGG-AA-GGGACTACAAAGG-TTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGA</genome_strand>
        <mrna_strand>GCTTCTTTTGCTTCTTTCTTTA-GTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAATGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTAGATATTGGGGTTTTGATTAACAACGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAAGGGGACTACAAAGGTTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E410042" ref_strand="+" ref_description="SGN-E410042 [PPI-15-J18]">
      <seq>cttcttttgcttctttctttaggtttcttgaaagtcttgtgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaaggggtttgcttttgaattagctcgaaaagggcttaatttagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaatattaaggagacaattgaaggattagatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctgtatgctgtttatgccgctactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaatggcgtcaatcaaaagatcttcatttttttgtccctcgactgatggntatgctcggtctgccctgcgatggattggtcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62260" stop="64822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62560" g_stop="63152" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="593" r_length="593" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="663" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64522" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="768" r_length="105" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E410042" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E410042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62560" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATG</genome_strand>
        <mrna_strand>CTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGGTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATTTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAATATTAAGGAGACAATTGAAGGATTAGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAAC-AAAATGGCGTCAATCAAAAGATCTTCATTTTTTTGTCCCTCGACTGATGGNTATGCTCGGTCTGCCCTGCGATGGATTGGTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269230" ref_strand="+" ref_description="SGN-E269230 [cLEI-16-H24]">
      <seq>tgcttttcagtcatctttctcaaatgggtctatgtcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62299" stop="63358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62599" g_stop="63058" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E269230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62599" e_stop="63058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTC</genome_strand>
        <mrna_strand>TGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E260824" ref_strand="+" ref_description="SGN-E260824 [cLEG-55-J8]">
      <seq>tcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaggtgcacaccttactggcccattctccttctgtggggtggtctatgttcattgccagagtcgatgggtgatgcttggcgtctgaacttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62333" stop="64920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62633" g_stop="63152" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="590" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64620" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="793" r_length="203" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E260824" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62633" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCT-CTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGC</genome_strand>
        <mrna_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCC-AGGTGCACACCTTACTGG-CCCATTCTCCTTCTGTGGGGTGGTCTATGTTCATTGCCAGAGTCGATGGGTGATGCTTGGCGTCTGAACTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264124" ref_strand="+" ref_description="SGN-E264124 [cLEG-64-O4]">
      <seq>tcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacnagaagagtgggattgatgtgcaatgccaggtgccgttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62333" stop="64081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62633" g_stop="63152" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="590" r_length="70" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E264124" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62633" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG</genome_strand>
        <mrna_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACNAGAAGAGTGGGATTGATGTGCAATGCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261116" ref_strand="+" ref_description="SGN-E261116 [cLEG-65-O24]">
      <seq>tcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattgcgatattgaggttttgattaaaaatgttgggggtgtcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62333" stop="63299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62633" g_stop="62999" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E261116" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62633" e_stop="62999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTG-GATATTGGGGTTTTGATTAATAATGTT-GGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGAT</genome_strand>
        <mrna_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGCGATATTGAGGTTTTGATTAAAAATGTTGGGGGTGTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259111" ref_strand="+" ref_description="SGN-E259111 [cLEG-41-N13]">
      <seq>tcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62333" stop="63231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62633" g_stop="62931" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E259111" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62633" e_stop="62931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAAT</genome_strand>
        <mrna_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370034" ref_strand="+" ref_description="SGN-E370034 [TUS-26-H4]">
      <seq>tcaatttcctcagacctgctaagaatcttaagaaatatgggtcatgggcacttgttactggacctacagatggtattgggaagggctttgcttttgaattagctcgaaaagggcttaatctagttcttgtgggtcgtaaccctgataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62333" stop="63151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62633" g_stop="62851" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E370034" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62633" e_stop="62851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATT</genome_strand>
        <mrna_strand>TCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347813" ref_strand="+" ref_description="SGN-E347813 [cTOF-26-D6]">
      <seq>ataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgctttgcgtctgaacttctgcattggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62477" stop="64927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62777" g_stop="63152" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="446" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64627" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="657" r_length="211" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E347813" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62777" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAA</genome_strand>
        <mrna_strand>ATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTTGCGTCTGAACTTCTGCATTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329740" ref_strand="+" ref_description="SGN-E329740 [cTOD-3-E11]">
      <seq>ataaacttaaggatgtttctgaatcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62477" stop="64822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62777" g_stop="63152" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="446" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64522" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="552" r_length="106" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E329740" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62777" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATG</genome_strand>
        <mrna_strand>ATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716069" ref_strand="+" ref_description="SGN-E716069 [FB16AB08]">
      <seq>atcgattaaagctaaatatggacagacccagatcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattcgaaggagagggcagctgaaggattccaggaagaaagaatagaaagcatctgctttacctcattccatatcttaaaagtttgattagtagacaattaatttccgtctctatttccaattgggtaatgctagttactgtaaatgcactagaagcttgattctgttcttactcattaaacaaggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62499" stop="65114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62799" g_stop="63152" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="424" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64814" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="822" r_length="398" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E716069" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62799" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCT</genome_strand>
        <mrna_strand>ATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAAATGCACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606390" ref_strand="+" ref_description="SGN-E606390 [22333]">
      <seq>acagacccagatcaaaacagtggtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattagatattggggttttgattaacaacgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctgtatgctgtttatgccgctactaaagcatacattgatcagttctccagatgcctctatgtagagtacaagaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaaatggcgttcatcaaaagatcttcattttttgttcccgcgaatgatggttatgctcgggctgccctgcgatggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62520" stop="64815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62820" g_stop="63152" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="403" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64515" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="502" r_length="99" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E606390" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E606390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62820" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATT</genome_strand>
        <mrna_strand>ACAGACCCAGATCAAAACAGTGGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTAGATATTGGGGTTTTGATTAACAACGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGATCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAACAAAAATGGCGTTCATCAAAAGATCTTCATTTTTTGTTCCCGCGAATGATGGTTATGCTCGGGCTGCCCTGCGATGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348401" ref_strand="+" ref_description="SGN-E348401 [cTOF-27-N11]">
      <seq>tcaaaacagtcgtcgttgatttctctggtgatttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattcgaaggagagggcagctgaaggattccaggaagaaagaatagaaagcatctgctttacctcattccatatcttaaaagtttgattagtagacaattaatttccgtctctatttccaattgggtaatgctagttactgtaaatgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62531" stop="65076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62831" g_stop="63152" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="392" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64776" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="752" r_length="360" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E348401" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62831" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACT</genome_strand>
        <mrna_strand>TCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAAATGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240063" ref_strand="+" ref_description="SGN-E240063 [cLED-32-D8]">
      <seq>tttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62562" stop="64930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62862" g_stop="63152" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="361" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64630" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="575" r_length="214" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E240063" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62862" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTC</genome_strand>
        <mrna_strand>TTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235672" ref_strand="+" ref_description="SGN-E235672 [cLED-15-D23]">
      <seq>tttggatgaaggggttaagaagattaaggagacaattgaaggattggatattggggttttgattaataatgttggggtttcgtatccttatgctagatttttccatgaagtggatgataagctgttggcagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62562" stop="64867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62862" g_stop="63152" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="361" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64567" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="512" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E235672" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62862" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTG</genome_strand>
        <mrna_strand>TTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E608437" ref_strand="+" ref_description="SGN-E608437 [24424]">
      <seq>cagatttgattaaagttaatgtggaagggactacaaaggttactcaagctgttttgcctggtatgattcagaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctgtatgctgtttatgccgctactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaaatggcgtcaatcaaaagatcttcattttttgttccctcgactgatggttatgctcggtctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtttgctatattcatcaccagaatcgatggttgatgcttggcgtctgaagttctgcattggagttcgaaggagagggcagctgaaggattccaggaagaatgaatagaaagcatctcctttacctctttccatatcttaaaagtctgattagtaggcaactactttctgtctctatttccaattgggtaatgcaacaagaagcttgatttcgttcttactcattaaacaagggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62690" stop="65114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62990" g_stop="63152" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="233" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64759" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="576" r_length="343" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E608437" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E608437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62990" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTA</genome_strand>
        <mrna_strand>CAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAACAAAAATGGCGTCAATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGTCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTTTGCTATATTCATCACCAGAATCGATGGTTGATGCTTGGCGTCTGAAGTTCTGCATTGGAGTTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAATGAATAGAAAGCATCTCCTTTACCTCTTTCCATATCTTAAAAGTCTGATTAGTAGGCAACTACTTTCTGTCTCTATTTCCAATTGGGTAATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572847" ref_strand="+" ref_description="SGN-E572847 [32065]">
      <seq>gaggaaaagaggagcaattgttaatattggttctggtgcggctattgttatcccctctgatcccctggtatgctgtttatgccgctactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagcaagagtggaattgatgtgcaatgccaggtgccgttgtatgtggcaacaaaaatggcgtcaatcaaaagatcttcattttttgttccctcgactgatggttatgctcggtctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggttcgctatattcatcaccagaatcgatggttgatgcttggcgtctgaagttctgcattggagttcgaaggagagggcagctgaaggattccaggaagaatgaatagaaagcatctcctttacctctttccatatcttaaaagtctgattagtaggcaactactttctgtctctatttccaattgggtaatgcaacaagaagcttgatttcgttcttactcattaaacaaggcctagtgttattttgcatttttagttgtatgctgattgcaatcaagagcagtctaaaggataattcgaacctctcaaatcctacactgtctagccaaaagaaccatttccaggggcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62760" stop="65192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63060" g_stop="63152" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="165" r_length="71" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="0.94"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64892" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="627" r_length="462" r_score="0.884"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E572847" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63060" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCT-GTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAG-AAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCG-AATCAAGAGCGTTCTAAAAGA-AATTCCAACTCTTAAGATACT</genome_strand>
        <mrna_strand>GAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCCCTGGTATGCTGTTTATGCCGCTACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGCAAGAGTGGAATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTGTATGTGGCAACAAAAATGGCGTCAATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGTCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTTCGCTATATTCATCACCAGAATCGATGGTTGATGCTTGGCGTCTGAAGTTCTGCATTGGAGTTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAATGAATAGAAAGCATCTCCTTTACCTCTTTCCATATCTTAAAAGTCTGATTAGTAGGCAACTACTTTCTGTCTCTATTTCCAATTGGGTAA---T-G---C---AA--C-A--AGAAGCTTGATTTCGTTCTTACTCATTAAACAAGGCCTAGTGTTA-TTTTGCATTTTTAGTTGTATGCTGATTGCAATCAAGAGCAGTCTAAAGGATAATTCGAACCTCTCAAATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310743" ref_strand="+" ref_description="SGN-E310743 [cLEZ-15-D7]">
      <seq>tctgatcctctgtatgctgtttatgccgcaactaaagcatacattgaccagttctccagatgcctctatgtagagtacaagaagagtgggattgatgtgcaatgccaggtgccgttatatgtggcaacaaaaatggcgtcgatcaaaagatcttcattttttgttccctcgactgatggttatgctcgggctgccctgcgatggattggtcatgagccaaggtgcacaccttactggccccattctcttctgtggggtgttctatgttcattgccagagtcgatggttgatgcttggcgtctgaacttctgcattggaattcgaaggagagggcagctgaaggattccaggaagaaagaatagaaagcatctgctttacctcattccatatcttaaaagtgtgattagtagacaattaatttccgtctctatttccaattgggtaatgctagttactgtaatgcaactagaagcttgattctgttcttactcattaaacaaggcctagtgttatttttgcaattttagttgtaggctgatcgaatcaagagcgttctaaaggaaaaagaaatttttgcaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="62815" stop="65173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63115" g_stop="63152" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63710" g_stop="63779" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="108" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64417" g_stop="64892" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="584" r_length="476" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E310743" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63115" e_stop="63152"/>
          <exon e_start="63710" e_stop="63779"/>
          <exon e_start="64417" e_stop="64892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGCGTAAGCTGAACACTCTCTACTATCTGCATTTTCTTTCTATAATTTATACGAATTTGGTTTGTTGTTTCTTTTTGGATTGGCTGATAGCAAATGATTGCACCAACTTAATAGATAATTCATAAGTTGATAAGACATTGAAGCCTACTAGAAAATCTTACACGTAAACTATATGCTGATATTCCTAAAGTACACATGTAAACTTAACATTTTTGTGCAAACGGATGGATTTCCAAACACCGAATTTGAGTGGAGATCTGATTGCTAATCGAAACGTCCTCATCTCAGGGATTGGATGACATGAGAATCTTGATATCCTCTATATAAAAAAAAAAGAGATCAACCTGTTCCTGGGTGTAGATTCATAAATATATCATCAGGTGAAATGCCTTAAAGCTAATTTGAGGAACTGGTGATAGTTTTACATTACCATTAGTTTCGTGTTTTGAATAATGACAATGTTTTAGACTTCTAGGACGACTTGTATTTTAAGCATGAAATAGTAGCTATTCCCTTATATTCTTTAGTATTGCATTGAACTTTTTGGATCTATATTTCAGATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAGGTATATGTTAACCCTTGGCTTTACTGGTTATTTATAAGTTCTCTAAATGCCTCATGTGGTGATCATTTAGATACTGGCTTTTTGATCCCATTTTTCTTGTCAATTTTGAAAGTTGTAATCATATTCTTTTTATGCTGGCGTACAAGTCCCATCTGATATTCCCTACTGTCGTATGCCCTATTGCCCTGGATTCTTCTGTCTTTTGCTTGTTTGTATATTTATTCTACAAGACGGAACACATTTTAGGAGCATATAAATAGTCTGGTATAAAGTCTTAAAATTGGCACTCTATTGGATGTTTGTTGGTAGAGTTCAGTAATTCACTATGGCTAGTTGTTTGTTATGGTCAAACATGTGAGGCTAACTAATATAGAAGTGTTTTGGGGGTTGAATTTCTGAAGAGTTGTTATGTTGATATGTATAAATTAAAATTTTACTTTTTCAACTTTCCTCTTTATAATTAAACATTTGGAGTGTGATTTTTGTAGTGAATGAATTTGTCTGTTGGCGTCTAGTTCAACTTCATATATTGAATAAGGTCTTGATAAAGTAGGAGGACATCCTGACATCCTCCGTTACTTTCTTTTTTTTTAACTTTCCACTGATGCGACATGATTCGTGGTTTTCCAAATTATAGGTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACT</genome_strand>
        <mrna_strand>TCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTGTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAGGAAAAAGAAATTTTTGCAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350236" ref_strand="+" ref_description="SGN-E350236 [cTOS-4-F21]">
      <seq>tgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaatatttcctctgaacttagataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66010" stop="64838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65710" g_stop="65677" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65591" g_stop="65138" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="488" r_length="454" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E350236" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65710" e_stop="65677"/>
          <exon e_start="65591" e_stop="65138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAAAA</genome_strand>
        <mrna_strand>TGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545105" ref_strand="+" ref_description="SGN-E545105 [TUS-67-M13]">
      <seq>gagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66181" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65881" g_stop="65677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65591" g_stop="65155" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="642" r_length="437" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E545105" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65881" e_stop="65677"/>
          <exon e_start="65591" e_stop="65155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCC</genome_strand>
        <mrna_strand>GAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303629" ref_strand="+" ref_description="SGN-E303629 [cLEY-6-O1]">
      <seq>gaatggtgatagtagaaaatcaaaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65795" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65495" g_stop="65155" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E303629" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65495" e_stop="65155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCC</genome_strand>
        <mrna_strand>GAATGGTGATAGTAGAAAATCAAAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303630" ref_strand="+" ref_description="SGN-E303630 [cLEY-6-O1](-)">
      <seq>gaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65795" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65495" g_stop="65156" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E303630" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>340</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65495" e_stop="65156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTC</genome_strand>
        <mrna_strand>GAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390948" ref_strand="+" ref_description="SGN-E390948 [TUS-46-L18](-)">
      <seq>gcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66363" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66063" g_stop="66007" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="301" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65591" g_stop="65163" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="730" r_length="429" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="731" polyA_stop="741"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E390948" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66063" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</genome_strand>
        <mrna_strand>GCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549152" ref_strand="+" ref_description="SGN-E549152 [TUS-67-M13](-)">
      <seq>gagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66181" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65881" g_stop="65677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65591" g_stop="65163" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="634" r_length="429" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E549152" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65881" e_stop="65677"/>
          <exon e_start="65591" e_stop="65163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</genome_strand>
        <mrna_strand>GAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309689" ref_strand="+" ref_description="SGN-E309689 [cLEY-26-K19]">
      <seq>agataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66180" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65880" g_stop="65677" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65591" g_stop="65163" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="633" r_length="429" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E309689" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65880" e_stop="65677"/>
          <exon e_start="65591" e_stop="65163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</genome_strand>
        <mrna_strand>AGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223710" ref_strand="+" ref_description="SGN-E223710 [cLEL-19-F18](-)">
      <seq>gctttgagagtagcatcaaggttatcttaaaagaactggccaaaaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65841" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65541" g_stop="65163" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="380" polyA_stop="394"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E223710" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65541" e_stop="65163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</genome_strand>
        <mrna_strand>GCTTTGAGAGTAGCATCAAGGTTATCTTAAAAGAACTGGCCAAAAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224072" ref_strand="+" ref_description="SGN-E224072 [cLEL-19-F18](-)">
      <seq>actcccaggtcaaaaagcatgtttgttcgtatgtttagcgaaaattctttcaagaataaaaatggcaagagtcatcaaaaaggctcaactggtagatactgatagagatgttgaaattcaatgataagatccgcatgaattctatccactagcatgctttgcttaatctgtctgtgcactttcagtcaacaggtttagattgaagactattttgaaagcttttattagttcttcctgctagtaatgaattttatatttcttggacaaagtttatgaatatgtgcatcagttcatcacaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65758" stop="64860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65458" g_stop="65163" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="298" polyA_stop="312"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E224072" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65458" e_stop="65163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATC-AAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAA</genome_strand>
        <mrna_strand>ACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAAAATTCTTTCAAGAATAAAAATGGCAAGAGTCATCAAAAAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733228" ref_strand="+" ref_description="SGN-E733228 [LB04BC08]">
      <seq>cggttagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaatagaaatggcaagagtgaatcagaggctcaactggtagatactgatagagatgttgaaattcnatgataagatccgcatgaattctatcccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66876" stop="65009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66578" g_stop="66544" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="171" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="370" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="614" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65313" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="893" r_length="279" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="895" polyA_stop="909"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E733228" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66578" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCC</genome_strand>
        <mrna_strand>CGGTTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGAATCAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCNATGATAAGATCCGCATGAATTCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459822" ref_strand="+" ref_description="SGN-E459822 [cPRO-29-E11]">
      <seq>ttacttccgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaagattatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaactcagagaactctcaggtcaaaaagcatgtttgttcgtatgtttagcgagaactctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatttgcatgaattttatgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65889" stop="65015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65687" g_stop="65685" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65684" i_stop="65592" i_length="93">
            <donor d_prob="0.965" d_score="0.00"/>
            <acceptor a_prob="0.757" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65591" g_stop="65317" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="284" r_length="281" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="288" polyA_stop="303"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E459822" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>278</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E459822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65687" e_stop="65685"/>
          <exon e_start="65591" e_stop="65317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGG-----A-AGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCT</genome_strand>
        <mrna_strand>TTA.............................................................................................CTTCCGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGATTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAACTCAGAGAACTCTCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAACTCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATTTGCATGAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436031" ref_strand="+" ref_description="SGN-E436031 [STM-62-M10]">
      <seq>gttacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaagattatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaactcagagaactctcaggtcaaaaagcatgtttgttcgtatgtttagcgagaactctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatttgcatgaattttatgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65891" stop="65015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65591" g_stop="65317" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="285" polyA_stop="300"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E436031" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65591" e_stop="65317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGG-----A-AGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCT</genome_strand>
        <mrna_strand>GTTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGATTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAACTCAGAGAACTCTCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAACTCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATTTGCATGAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436032" ref_strand="-" ref_description="SGN-E436032 [STM-62-M10]">
      <seq>gctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaagattatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaactcagagaactctcaggtcaaaaagcatgtttgttcgtatgtttagcgagaactctttcaagaatagaaatggcaagagtgatcaagaggctcaactggtagatactgatagagatgttgaaattcaatgataagatttgcatgaattttagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="65891" stop="65016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65591" g_stop="65317" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="282" polyA_stop="299"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E436032" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436032" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65591" e_stop="65317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGG-----A-AGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCT</genome_strand>
        <mrna_strand>GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGATTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAACTCAGAGAACTCTCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAACTCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATTTGCATGAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699289" ref_strand="+" ref_description="SGN-E699289 [FA09CA02]">
      <seq>gttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctggaagaactcccaggtcaaaaagcatgtttgttcgtatgtttagcgagaaatctttcaagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66917" stop="65102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66617" g_stop="66544" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="210" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="409" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="653" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65402" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="843" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E699289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66617" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAAT</genome_strand>
        <mrna_strand>GTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347800" ref_strand="+" ref_description="SGN-E347800 [cTOF-26-P11]">
      <seq>aaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgagccgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatcttagaagaactggccaagaagaatggtgatagtagaaaatcagaagatgctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66723" stop="65162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66423" g_stop="66300" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="323" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="567" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65591" g_stop="65462" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="697" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E347800" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66423" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGA</genome_strand>
        <mrna_strand>AAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGCCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331917" ref_strand="+" ref_description="SGN-E331917 [cTOD-16-I23]">
      <seq>tttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccacagaggttgagggacctaaatattggatcaccacctgaatctgaactgacgcgagctgagtttgatgcgttagctcgaaggctacgacgcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaagttatcttagaaagactggccaagaagaatggtgatagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66740" stop="65183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66551" g_stop="66544" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="144" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="343" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="587" r_length="244" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.757" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65483" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="696" r_length="109" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E331917" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66551" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65483"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGT</genome_strand>
        <mrna_strand>TTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCACAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGACGCGAGCTGAGTTTGATGCGTTAGCTCGAAG.....................................................................................GCTACGACGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAAGTTATCTTAGAAAGACTGGCCAAGAAGAATGGTGATAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697339" ref_strand="+" ref_description="SGN-E697339 [FA02BA11]">
      <seq>tatgcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="67090" stop="65214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66790" g_stop="66759" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="139" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="275" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="474" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="718" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65591" g_stop="65514" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="796" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E697339" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66790" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTT</genome_strand>
        <mrna_strand>TATGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347136" ref_strand="+" ref_description="SGN-E347136 [cTOF-25-G19]">
      <seq>tcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66740" stop="65214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66557" g_stop="66544" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="14" r_length="14" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="150" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="349" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="593" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65514" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="671" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E347136" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66557" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTT</genome_strand>
        <mrna_strand>TCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396291" ref_strand="+" ref_description="SGN-E396291 [TUS-46-L18]">
      <seq>tgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtttgaggcgttagctcgaaggctacgaggcatcaccaaatctatatcaagatttccaacattcaagcgccgctttgagagtagcatcaaggttatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66740" stop="65215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66554" g_stop="66544" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="147" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="346" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="590" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.757" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65515" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="667" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E396291" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66554" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCT</genome_strand>
        <mrna_strand>TGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG.....................................................................................GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332108" ref_strand="+" ref_description="SGN-E332108 [cTOD-16-I24]">
      <seq>tttcctatgcctcactacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggactgattctttcataaatccaccatctagtacaaacgccatcaatgtccccatactcgagattgaagcccctcgagcttcttgatggcttattcaagggctgacaacggcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctaatagagacagaggtcaagtcattaacattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccgacagtgctggtattttgttaaatgatgacaccgctgaaataactatcacgaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcgaagaccacatcaaagccggaaatctttctgacagcgactaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctacatattggatcaccacctgaatctgaactgacgcgagctgagcctgacgcgttagctctaaggctacgaggcatcaccacatctatatcaagatttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66740" stop="65255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66551" g_stop="66544" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="145" r_length="137" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.699" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="344" r_length="199" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65677" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="588" r_length="244" r_score="0.951"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.757" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65591" g_stop="65555" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="625" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E332108" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66551" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65677"/>
          <exon e_start="65591" e_stop="65555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAG-TTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAGGTGATAAACCTTGTTTTCCCATGTTTTTACCACTCACTTATGGCATTCTGATTTTTGTATTAACTCCTCCTGAATTTTCATTAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCA</genome_strand>
        <mrna_strand>TTTCCTAT............................................................................................................GCCTCACTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGACTGATTCTTTCATAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGATTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGACAACGGCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAATAGAGACAGAGGTCAAGTCATTAACATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCGACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCGCTGAAATAACTATCACGAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCGAAGACCACATCAAAGCCGGAAATCTTTCTGACAGCGACTAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTACATATTGGATCACCACCTGAATCTGAACTGACGCGAGCTGAGCCTGACGCGTTAGCTCTAAG.....................................................................................GCTACGAGGCATCACCACATCTATATCAAGATTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215118" ref_strand="+" ref_description="SGN-E215118 [cLEC-78-B20]">
      <seq>tgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatccagagaggttgagggacctaaatattggatcaccacctgaatctgaactgaggcgagctgagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66894" stop="65395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66594" g_stop="66544" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="187" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="386" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65695" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="612" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E215118" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66594" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTT</genome_strand>
        <mrna_strand>TGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420234" ref_strand="+" ref_description="SGN-E420234 [STM-30-N4]">
      <seq>gggccccccctcgagcttcttgtacaactttattcaagggctgtcaatatcatggctaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttaccttcctattgcatccttcacacccttatacgttctgcaaaagccaacagtgctggtattttgttaaatgatgacggcactgaattaactagcacgaacaggcccagagataccttctctgattggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtacattggcaaattggttttgttgagtggtgatcctgagaggttgagggatttaaatattgaatcaccacctgaatctgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66493" stop="65411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66314" g_stop="66300" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.699" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="216" r_length="201" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="0.94"/>
            <acceptor a_prob="0.985" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65920" g_stop="65711" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="426" r_length="210" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E420234" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66314" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTG-ATGGC-TTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAAC</genome_strand>
        <mrna_strand>GGGCCCCCCCTCGAG..............................................................................................CTTCTTGTACAACTTTATTCAAGGGCTGTCAATATCATGGCTAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTACCTTCCTATTGCATCCTTCACACCCTTATACGTTCTGCAAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACGGCACTGAATTAACTAGCACGAACAGGCCCAGAGATACCTTCTCTGATTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACATTGGCAAATTGGTTTTGTTGAGTGGTGATCCTGAGAGGTTGAGGGATTTAAATATTGAATCACCACCTGAATCTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704393" ref_strand="+" ref_description="SGN-E704393 [FA24AF10]">
      <seq>gatcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaattggttttgttgagtggtgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="67284" stop="65459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66984" g_stop="66759" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="333" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="469" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="668" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65920" g_stop="65759" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="669" r_stop="830" r_length="162" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E704393" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66984" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATC</genome_strand>
        <mrna_strand>GATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323032" ref_strand="+" ref_description="SGN-E323032 [cTOB-28-A13]">
      <seq>ggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagataatagccgggaaatctttctgacagcgacgacgagtaccttggcaaattgggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66931" stop="65475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66631" g_stop="66544" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="224" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="423" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65774" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="571" r_length="148" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E323032" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66631" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCC-GGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTT</genome_strand>
        <mrna_strand>GGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATAATAGCCGGGAAATCTTTCTGACAGCGACGACGAGTACCTTGGCAAATTGGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306396" ref_strand="+" ref_description="SGN-E306396 [cLEX-13-B12]">
      <seq>gctttcctaggcctcagtacanaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtaccttggcaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66740" stop="65480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66553" g_stop="66544" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="146" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="345" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65920" g_stop="65780" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="486" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E306396" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66553" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAAT</genome_strand>
        <mrna_strand>GCTTTCCTAG............................................................................................................GCCTCAGTACANAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310006" ref_strand="+" ref_description="SGN-E310006 [cTOA-4-I11]">
      <seq>tacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagcggtcaagtcattagcattggtttgcctgcctattgcatccttcacacccttatacattctgctaaagccaacagtgctggtatcttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatcaaagaccagatcaaagccggaaatctttctgacagcgacgaggagtacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66645" stop="65487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66345" g_stop="66300" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="245" r_length="199" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65920" g_stop="65787" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="379" r_length="134" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E310006" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66345" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTT</genome_strand>
        <mrna_strand>TACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGCGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCACACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATCTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297391" ref_strand="+" ref_description="SGN-E297391 [cLEW-14-H14]">
      <seq>gccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataactagcacaaacaggcctagagataccttcgcggagtggtttttcaatccactcttgatcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66638" stop="65538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66338" g_stop="66300" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="238" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65920" g_stop="65838" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="321" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E297391" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66338" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATC</genome_strand>
        <mrna_strand>GCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697932" ref_strand="+" ref_description="SGN-E697932 [FA04DA04]">
      <seq>ccctttaacctcctgatggaaaatgctacgagatcagggtgctttatattcctttggcgctattagctgtggaactaggactcgtggttgatatgccaatgatcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaataacctagcacaaacaggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68523" stop="65583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68229" g_stop="68193" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.865"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67047" g_stop="66759" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="326" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="433" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="569" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="768" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65920" g_stop="65883" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="807" r_length="39" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E697932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68229" e_stop="68193"/>
          <exon e_start="67047" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAA-CTAGCACAAACAGGCCT</genome_strand>
        <mrna_strand>CCCTTTAACCTCCTGATGGAAAATGCTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATAACCTAGCACAAACAGGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703960" ref_strand="+" ref_description="SGN-E703960 [FA22DH02]">
      <seq>tgctagttgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgacttatttcaagattgtataagccgagaagggccttttctagagtcaatctgtgtaccatttgctgggcttgctatctgtactctggccattggatgttattgctgcattctttggatcaatatgatcaagggtccctctaggcgcttatgcgagagtatgtgtatatcaggagtgctctctatgagcaaggctttgctatatcggtgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcaatacataaagaagactgcatcacgtaccaactcccgcgcatattctttatccaagcctgattctttcacaaatccaccatctagtacaaacgccatcagtgtacccatactcgagttgaaccccctcgagcttcttgatggataattcaaaggctgtcaacgtcatggcgaaatcatggtatctcactgagtaattacaccaaaagacattgaagatgcccaatctagtagagacagtggtcaagtcattatcattggattgcctgcctattgcatccttcagacccttatacattctgctaaagccagcagtgctggtattttggtacatgatgacgccactgaaataac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="67279" stop="65699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66979" g_stop="66759" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="0.556" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="330" r_length="107" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="466" r_length="136" r_score="0.919"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.699" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="665" r_length="199" r_score="0.935"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="0.94"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65920" g_stop="65899" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="687" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E703960" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66979" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCG-TTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCT-TACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATAAC</genome_strand>
        <mrna_strand>TGCTAGTTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGACTTATTTCAAGATTGTATAAGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGGCTTGCTATCTGTACTCTGGCCATTGGATGTTATTGCTGCATTCTTTGGATCAATATGATCAAGGGTCCCTCTAGGCGCTTATGCGAGAGTATGTGTATATCAG............................................................................................................GAGTGCTCTCTATGAGCAAGGCTTTGCTATATCGGTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAATACATAAAGAAGACTGCATCACGTACCAACTCCCGCGCATATTCTTTATCCAAGCCTGATTCTTTCACAAATCCACCATCTAGTACAAACGCCATCAGTGTACCCATACTCGAGTTGAACCCCCTCGAG..............................................................................................CTTCTTGATGGATAATTCAAAGGCTGTCAACGTCATGGCGAAATCATGGTATCTCACTGAGTAATTACACCAAAAGACATTGAAGATGCCCAATCTAGTAGAGACAGTGGTCAAGTCATTATCATTGGATTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAGCAGTGCTGGTATTTTGGTAC......................................................................................ATGATGACGCCACTGAAATAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305962" ref_strand="+" ref_description="SGN-E305962 [cLEY-17-K20]">
      <seq>ccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaccgagtaattacacaaaaagacattgaggatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagaccctcatacattctgctaaagccaacagtgctggtattttgttaaatgatgacaccactgaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="66637" stop="65601"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66337" g_stop="66300" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66007" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="237" r_length="199" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65920" g_stop="65901" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="257" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E305962" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>257</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66337" e_stop="66300"/>
          <exon e_start="66205" e_stop="66007"/>
          <exon e_start="65920" e_stop="65901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAAGTAAGTCAAATAAGCAACTTTGACCATTTAGTTAAAAATTGGGATTATAAAAAGAGACTGATCATGTAAACCTTCATTTATTGCAGATGATGACACCACTGAAATA</genome_strand>
        <mrna_strand>CCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCACCGAGTAATTACACAAAAAGACATTGAGGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTCATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA......................................................................................ATGATGACACCACTGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251797" ref_strand="+" ref_description="SGN-E251797 [cLEG-15-P20]">
      <seq>tcaatctgtgtaccatttgctggccttgctatcttactctggccatgggctgggattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatctagtacaaacgccatcaatgtccccatactcgagttgaagcccctcgagcttcttgatggcttattcaagggctgtcaacgtcatggcgaaatcatggtatctcaaggagtaattacacaaaaagacattgaagatgccaaatctagtaaagacagtggtcaagtcattagcattggtttgcctgcctattgcatccttcagacccttatacattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="67184" stop="65738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66884" g_stop="66759" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="233" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66435" g_stop="66300" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="369" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66205" g_stop="66038" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="537" r_length="168" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E251797" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66884" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66300"/>
          <exon e_start="66205" e_stop="66038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAGGTATTCTTCAAGTTATTTGCTTTTTTGATGCTTCACCATTACCTGGCTGTGAATTTTGGTGCTAATTTGCGCTCAACATATATTACTACTGTAGCTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCT</genome_strand>
        <mrna_strand>TCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATGGGCTGGGATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG..............................................................................................CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328637" ref_strand="+" ref_description="SGN-E328637 [cTOC-23-L18]">
      <seq>ttctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcagggtgctttatattcctttggcgctattagctgtggaactaggactcgtggttgatatgccaatgatcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgccgtttatttcaagattgtataggccgagaagggccttttctagactcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcacgagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatataccaatgatgtgctagacatgccaaaagggtcctgctttcctaggcctcagtacacaaagaagactgcctcaagtaccaactcccgagcagattctttatccaagcctgattctttcagaaatcccccatctattacaaacgccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68554" stop="66034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68254" g_stop="68193" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67047" g_stop="66759" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="351" r_length="289" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="458" r_length="107" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66435" g_stop="66334" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="560" r_length="102" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E328637" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68254" e_stop="68193"/>
          <exon e_start="67047" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCAT</genome_strand>
        <mrna_strand>TTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGCCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGACTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAC............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATACCAATGATGTGCTAGACATGCCAAAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACACAAAGAAGACTGCCTCAAGTACCAACTCCCGAGCAGATTCTTTATCCAAGCCTGATTCTTTCAGAAATCCCCCATCTATTACAAACGCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332989" ref_strand="+" ref_description="SGN-E332989 [cTOD-19-F16]">
      <seq>atcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctaggcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattctttatcaaggcctgattctttcagaaatccaccatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="67283" stop="66048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66983" g_stop="66759" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="332" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66435" g_stop="66348" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="420" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E332989" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66983" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCT</genome_strand>
        <mrna_strand>ATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322276" ref_strand="+" ref_description="SGN-E322276 [cTOB-24-C21]">
      <seq>ggaattgcaactagcattattggcggggctgcttatggcttcctttcaccagtgtttgccactttccaagcagtggatggaagggcgactaatgccttctatcacagtatatatgatgggacctgggacacagtgaaaggaagcttgaccattgttagggatttgaaggatgtcttataccattcctatttctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcagggtgctttatattcctttggcgctattagctgtggaactaggactcgtggttgatatgccaatgatcatgctaattgctgcttgcaaattcccttacatgcttgtaaaggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgctatcttactctggccattggctgttattgctgcattctttggatcaatattagcaagtgtccctctaggcgcttatgcaggagtagttgtatatcaggagtgttctctttgggcagggctttgctatatcgttgcttccttgtccatatatgatgaatatagcaatgatgtgctagacatgccagaagggtcctgctttcctangcctcagtacagaaagaagactgcatcaagtaccaactcccgtgcagattcttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68837" stop="66081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68537" g_stop="68424" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68329" g_stop="68193" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="251" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67047" g_stop="66759" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="540" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66650" g_stop="66544" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="647" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108">
            <donor d_prob="0.887" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66435" g_stop="66381" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="702" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E322276" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322276" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68537" e_stop="68424"/>
          <exon e_start="68329" e_stop="68193"/>
          <exon e_start="67047" e_stop="66759"/>
          <exon e_start="66650" e_stop="66544"/>
          <exon e_start="66435" e_stop="66381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGTTTTGTTCCTTTTCTTCCAACTCCTTACTTCAATGATTTCAAAATTGCCTCTTGTGTTTTATACATTTCTGGAACTGCTAAAGTTTTACCAATGCCTTCTACTTCAGGAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAGGTTCTAATAACTATAACCTTTAGACCTCCAGAACTGTGATAATTGACAAAACTATATTTAATTTCAAATAATTTTGATAGCTTCCATATATCTGTGGTATTCATACAGGCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTA</genome_strand>
        <mrna_strand>GGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG............................................................................................................GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAN............................................................................................................GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399785" ref_strand="+" ref_description="SGN-E399785 [cSTC-2-O4]">
      <seq>cttgaaaggtgtcattgtgttccctatcgtccttattatactcactgtcggaaactgttcccttattttgggtctttggccagtgcacctgttctatacattttactgtatatggagcacaaagcaacttgtccagctttaaaatttgtgataagcatatgtgcccttgttattttatatttatggccgttcattgcaattgcaactagcattattggcggggctgcttatggcttcctttcaccagtgtttgccactttccaagctgtggatggaaggacgactaatgccttctatcacagtatatatgatgggacctgggacacggtgaaaggaagcttaaccattgttagggatttcaaggatgtcttataccattcctatttctcaatcatggatgattggcgacttcaaggaccttctgatggaaaatactacgagatcagggtgctttatattcctttggcgctaatagctgtggaactaggactcgtggttgacattccaatgatcatgctaattgctgcttgcaaattcccttacatgctttacaaagggtggcgtcgtttatttcatgattgtataagccgagaagggccttttcttgagacaatctgtgtgccatttgctggccttgctatcttactctggccaatggctgttattgctgcattctttggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69106" stop="66511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69079" g_stop="69072" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267">
            <donor d_prob="0.965" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68804" g_stop="68696" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="117" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79">
            <donor d_prob="0.841" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68616" g_stop="68424" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="309" r_length="192" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68329" g_stop="68193" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="446" r_length="137" r_score="0.942"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="0.90"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67047" g_stop="66811" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="683" r_length="237" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E399785" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69079" e_stop="69072"/>
          <exon e_start="68804" e_stop="68696"/>
          <exon e_start="68616" e_stop="68424"/>
          <exon e_start="68329" e_stop="68193"/>
          <exon e_start="67047" e_stop="66811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACTCTTTGCAGGTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAGGTGCATTCTTAAGCTCTCATGGTTAACCTTATGTGTCTAAAGATGCTCTTTAATGACTTCCACCTTTTATGAATTGCAGCACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATC</genome_strand>
        <mrna_strand>CTTGAAAG...........................................................................................................................................................................................................................................................................GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG...............................................................................CACAAAGCAACT-TGTCCAGCTTTAAAATTTGTGATAAGCATATGTGCCCTTGTTATTTTATATTTATGGCCGTTCATTGCAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCTGTGGATGGAAGGACGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGACCTGGGACACGGTGAAAGGAAGCTTAACCATTGTTAGGGATTTCAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTGGCGACTTCAAGGACCTTCTGATGGAAAATACTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTAATAGCTGTGGAACTAGGACTCGTGGTTGACATTCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTTACAAAGGGTGGCGTCGTTTATTTCATGATTGTATAAGCCGAGAAGGGCCTTTTCTTGAGACAATCTGTGTGCCATTTGCTGGCCTTGCTATCTTACTCTGGCCAATGGCTGTTATTGCTGCATTCTTTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346921" ref_strand="+" ref_description="SGN-E346921 [cTOF-32-J21]">
      <seq>tgtaaagatcgagtggttcttgatttagcgaagcataagaatggaacctccaaggggggtttttgattcggtgtggaacttcattcgtttcttaccttacttcattagcctgcttattttgggtgtcttgaaaggtgtcattgtgttccctatcgtccttattatactcactgtcggaaactgttcccttattttgggtctttggccagtgcacctgttctatacattttactgtatatggagcacaaagcaactaggtccagctttaaaatttttagtaggcatatgtgcccttgttattttatatttatggcccttcattggaattgcaactagcattattggcggggctgcttatggcttcctttcaccagtgtttgccactttccaagcagtggatggaagggcgactaatgccttctatcacagtatatatgatgggacctgggacacagtgaaaggaagcttgaccattgttagggatttgaaggatgtcttataccattccnannnctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcagggtgctttatattcctttggcgctattagctgtggaactaggactcgtggttgatatgccaatgatcatgctaattgctgcttgcaaattcccttacatgcttgtaaagggggtggcgtcgtttatttcaagattgtataggccgagaagggccttttctagagtcaatctgtgtaccatttgctggccttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69505" stop="66556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69205" g_stop="69072" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68804" g_stop="68696" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="243" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79">
            <donor d_prob="0.841" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68616" g_stop="68424" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="436" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68329" g_stop="68193" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="573" r_length="137" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67047" g_stop="66856" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="766" r_length="193" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E346921" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69205" e_stop="69072"/>
          <exon e_start="68804" e_stop="68696"/>
          <exon e_start="68616" e_stop="68424"/>
          <exon e_start="68329" e_stop="68193"/>
          <exon e_start="67047" e_stop="66856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACTCTTTGCAGGTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAGGTGCATTCTTAAGCTCTCATGGTTAACCTTATGTGTCTAAAGATGCTCTTTAATGACTTCCACCTTTTATGAATTGCAGCACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTCTTAATTCTGACAAAAATAAAACCATCAACCCCTGGGATTTCTAGCTATCTTAGGACAACCAGGATGAGGTCAAGATGTTATTCTACTTGTTAACCAGTCAAATGTCTTATTCTTATGACAACCGAAACATTGGTATACTATATGTTACTCTACTTGTCAGCAAGTTTTAGTCTCCTTCTTGTGACAAACAGAAACACAGATGCATTTTGTTTTTGGAAATGTTCAGTACTTTGCTACAGTTCTTTTAGTCTGAAGTTGCATGTTGTAGGTCTTTGCACTTACAACATTTTAAAAAGTCTGCTGTTTTCCTTGACAAAAATGTTCTTCGATTCTCATGGATTCAACTTATGCTGTTTATCTGCAAGCATATGTTGGGGGTTTGGCTGGGTATCAATTCTTTATGAGATATTATCTTTTTTCTCAGAAGCTACAATGCAATCTATTGCAGGGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAA-GGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGC</genome_strand>
        <mrna_strand>TGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAG...........................................................................................................................................................................................................................................................................GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG...............................................................................CACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCNANNNCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739219" ref_strand="+" ref_description="SGN-E739219 [LC16CC11]">
      <seq>cggttgggacctgggacacagtgaaaggaagcttgaccattgttagggatttgaaggatgtcttataccattcctatttctcaatcatggatgatttccgacttcaagaacctcctgatggaaaatgctacgagatcaggttttgttgaatcgtctatctcaaagttctttttcccgtctttgtccaatttgaaatttgatagttttctctatagttccataccttatatctttcattatcagagagtctcagataactagttagtatgtcaattcagttaatgaattgtatcttttattggaaatatacaacaaagcagcttgccgttgtttgctaattacatgctctacttttacatctctgtcagttgaaacctacacctcaaagctttcttgacaactcctaccatatgtgatgacagggtagagatggtggtgtaattttagctacagaagcttgcacgacagatgagagaatatctcgtatgatggttaacctaaaagaaaaacatgaacggagaatctgaatgtcccctattttcctagaatatttcatctattttaacttccgtttcagaagaattttcaaaactccagctttccctgtaggtttgatctatttttgtattagttcattccaaaaatatatatcccggtgactaaatggcaaactatacaaaaagaaatataagaagtatatacttactgttcatagcatctttacatcttccacatatattttgcttataacactttacactgtcaagatttttctgaatatcagtgaagcgtcaagttagttcatgcaaaatcttaaaacacttatttagtttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68630" stop="67196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68331" g_stop="67496" g_length="836"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="836" r_length="836" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E739219" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68331" e_stop="67496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</genome_strand>
        <mrna_strand>CGGTTGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399787" ref_strand="+" ref_description="SGN-E399787 [cSTC-2-O8]">
      <seq>agctttaaaatttgtgataagcatatgtgcccttgctattttatatttatggccgttcattgcaattgcaactagcattattggcggggctgcttatggcttactttcaccagtgtttgccactttccaagctgtggatggaaggacgactaatgccttctatcacagtatatatgatgggacctgggacacggtgaaaggaagcttaaccattgttagggatttcaaggatgtcttataccattcctatttctcaatcatggatgattggcgacttcaaggaccttctgatggaaaatacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="68898" stop="67902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68598" g_stop="68424" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68329" g_stop="68202" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="303" r_length="128" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E399787" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>303</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68598" e_stop="68424"/>
          <exon e_start="68329" e_stop="68202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTA</genome_strand>
        <mrna_strand>AGCTTTAAAATTTGTGATAAGCATATGTGCCCTTGCTATTTTATATTTATGGCCGTTCATTGCAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTACTTTCACCAGTGTTTGCCACTTTCCAAGCTGTGGATGGAAGGACGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGACCTGGGACACGGTGAAAGGAAGCTTAACCATTGTTAGGGATTTCAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTGGCGACTTCAAGGACCTTCTGATGGAAAATACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448085" ref_strand="+" ref_description="SGN-E448085 [cSTS-1-N19]">
      <seq>aagactcaattttcccccaaaagtgttgttttgagaagcaaaatccgagctttttggttccattttccaagatgaattgatttgtgaaaaggggttgtaccttcttagtgattgtgtaaagatcgagtggttcttgatttagcgaagaataagaatggaacctccaaggggggtttttacttctgtgtggaacttcattcgtttcttaccttacttcattggcctgcttattttgggtgtcttgaaaggtgtcattgtgttccctatcgtccttattatactcactgtcggaaactgttcccttattttgggtctttggccagtgcacctgttctatacattttactgtatatggagcacaaagcaactaggtccagctttaaaatttgtgataagcatatgtgcccttgttattttatatttatggccgttcattgcaattgcaactagcattattggcggngctgcttatggctttctttcaccagtgtttgccactttccaagctgtggatggaaagacgactaatgccttctatcacagtatatatgatggggacctggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69569" stop="68119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69282" g_stop="69072" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="248" r_length="210" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68804" g_stop="68696" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="357" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79">
            <donor d_prob="0.841" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68616" g_stop="68424" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="550" r_length="193" r_score="0.943"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94">
            <donor d_prob="0.924" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68329" g_stop="68316" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="565" r_length="15" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E448085" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69282" e_stop="69072"/>
          <exon e_start="68804" e_stop="68696"/>
          <exon e_start="68616" e_stop="68424"/>
          <exon e_start="68329" e_stop="68316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACTCTTTGCAGGTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAGGTGCATTCTTAAGCTCTCATGGTTAACCTTATGTGTCTAAAGATGCTCTTTAATGACTTCCACCTTTTATGAATTGCAGCACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATATGTATGTATTAATGATTCCTGTTTCCTACACTGTTGATATCTCATCTCTCATTTTCCTTTGACTGAGTTTGTGAATTGGTTCACTGTGATGGTAGGAT-GGGACCTGGGA</genome_strand>
        <mrna_strand>CAAAATCCGAGCTT-TTTGGTTCCATTTTCCAAGATGAATTGATTTGTGAAAAGGGGTTGTACCTTCTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGAATAAGAATGGAACCTCCAAGGGGGGTTTTTACTTCTGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTGGCCTGCTTATTTTGGGTGTCTTGAAAG...........................................................................................................................................................................................................................................................................GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG...............................................................................CACAAAGCAACTAGGTCCAGCTTTAAAATTTGTGATAAGCATATGTGCCCTTGTTATTTTATATTTATGGCCGTTCATTGCAATTGCAACTAGCATTATTGGCGGNGCTGCTTATGGCTTTCTTTCACCAGTGTTTGCCACTTTCCAAGCTGTGGATGGAAAGACGACTAATGCCTTCTATCACAGTATATAT..............................................................................................GATGGGGACCTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298281" ref_strand="+" ref_description="SGN-E298281 [cLEW-18-E12]">
      <seq>tttgttctaatatcctcaaaacccacatccacatcttcatctatgtttccatgttacgtactgactacggaaagactcagttcttttcagcaaaatccgagattttttggttgcattttccaagattaattgatttgtgaaaaggggttgtaccttgttagtgattgtgtaaagatcgagtggttcttgatttagcgaagcataagaatggaacctccaaggggggtttttgattcggtgtggaacttcattcgtttcttaccttacttcattagcctgcttattttgggtgtcttgaaaggttcttttcttcttcttcaattacactcatgtcactgttgtctcttctttcctttttttcaattagcatacttttttcatttttcttgtttttcatctctgttgctttaaaatgattttacttgagctgagaaacaacctctctatctcccaaggtaggggtaaggtctatacttaccagatcccactcaccaggtaagttgttgttgttttactgttccaaagctagtcatagaaatgactggtttgtgctacttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="69672" stop="68513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69372" g_stop="68813" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="560" r_length="560" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E298281" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69372" e_stop="68813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATTTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</genome_strand>
        <mrna_strand>TTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATGTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369433" ref_strand="+" ref_description="SGN-E369433 [TUS-23-M5](-)">
      <seq>ctttatattgctagtgtgtgtaagtatacaactcattgtttatatgttgtgctgttttcaacaaaaagtgtatgcttcctcttgggtaaagctacattagttgattgactttagatgcaaaatcaggcttatcccaattaccttttcacctctatcctggattcaagcattcatttttttttttgcactttcaatatataaaccgccccatcatattattatcaatttatacaatatgcctccctttaatttgcgaatcaaatacagtcatgcctccgaaagtgtttgttcaaaactcaaccttgacaaaaaacactagttgattttttccctttgtcctagctttagtggaaatagtttattcatacttattgctggggtgaaatggcatgtaccaactttgctaattttgttccctttgtactgaaaaagttgaaacccttccttttgtactgaaaaagttgaaaccctttaaagttgtttccataaaatttcaggctgacaggtaatttgaggaagcatattaatattttttttgtacaactaccaaaaagcttgctagaatcaattccttgacatatgtttgatgtaagtatttattgaactaaatttttttgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="72622" stop="71397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72322" g_stop="71704" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="619" r_length="619" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="621" polyA_stop="653"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E369433" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72322" e_stop="71704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATCTTTTCTCTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTCTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGCGTGAGATGGCATGTACCAACTCTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTCTTCTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTC</genome_strand>
        <mrna_strand>CTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTTTATATGTTGTGCTGTTTTCAACAAAAAGTGTATGCTTCCTCTTGGGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATTTTTTTTTTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAAAGTGTTTGTTCAAAACTCAACCTTGACAAAAAACACTAGTTGATTTTTTCCCTTTGTCCTAGCTTTAGTGGAAATAGTTTATTCATACTTATTGCTGGGGTGAAATGGCATGTACCAACTTTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAAAGTTGTTTCCATAAAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTTTTTTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369530" ref_strand="+" ref_description="SGN-E369530 [TUS-23-O23](-)">
      <seq>cctttgacagggaaaaaatttttactgctcagacaaaaggaacatgataagcacaactttatattgttagtgtgtgtaagtatacaactcattgtttatatgttgtgctgttttcaacaaaaagtgtatgcttcctcttgcgtaaagctacattagttgattgactttaaatgcaaaatcaggcttatcccaattaccttttcacctctatcctggattcaagcattcatttttttttttgcactttcaatatataaaccgccccatcatattattatcaatttatacaatatgcctccctttaatttgcgaatcaaatacagtcatgcctccgagagtgttcgttcaaaactcaaccttgacagaaaacactagttgattttttccctttgtcctagctttagtggatatagtttattcatacttattgctggggtgaaatggcatgtaccaactttgctaattttgttccctttgtactgaaaaagttgaaacccttccttttgtactgaaaaagttgaaaccctttagagttgtttccatagaatttcaggctgacaggtaatttgaggaagcatattaataaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="72678" stop="71494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72378" g_stop="71797" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="583" polyA_stop="612"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E369530" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72378" e_stop="71797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATCTTTTCTCTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTCTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGCGTGAGATGGCATGTACCAACTCTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTA</genome_strand>
        <mrna_strand>CCTTTGACAGGGAAAAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGTTAGTGTGTGTAAGTATACAACTCATTGTTTATATGTTGTGCTGTTTTCAACAAAAAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAAATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATTTTTTTTTTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTTTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGGGTGAAATGGCATGTACCAACTTTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733830" ref_strand="+" ref_description="SGN-E733830 [LB11AC05]">
      <seq>ctattatggcatcaatttacactgctcaagggaaatttaacatagttgattctatcatcaaggagatggttactactggagttgagcctacagttgttacattcaacgctattattagtggatgtgctcggaatggtatggaaagtgttgcatacgagtggtttcagcgtatgaaaactcaaaacataaccccgaatgaggtaagctatgaagtgctaattgaggctcttgccaatgatggcaagccgaggctagcatatgagttgtatgtgagagctctaactgaaggcctgagtctttctacaaaggcttatgatgcagtcatctcatctacacaggcatatggtgcaagtattgatctaagcattcttggcccccgcccaccagaaaaaagaaacgagtgcaaatcaggaaaagtttgtctgaattctgtcatatagccgatgttcccagaagaagcaggccctttgacagggaagaaatttttactgctcagacaaaaggaacatgataagcacaactttatattgctagtgtgtgtaagtatacaactcattgtctatatgttgtgctgttttcaacaaagagtgtatgcttcctcttgcgtaaagctacattagttgattgactttagatgcaaaatcaggcttatcccaattaccttttcacctctatcctggattcaagcattaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="73143" stop="71850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72843" g_stop="72157" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="692" polyA_stop="703"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E733830" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72843" e_stop="72157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAA</genome_strand>
        <mrna_strand>CTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAG-AAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369434" ref_strand="+" ref_description="SGN-E369434 [TUS-23-M5]">
      <seq>atggtagagaaaggtgaaaaacctacagttatatcctatggagcgttgctcagtgctctagaaaaaggcaagctctatgatgaagctcttcaggtttggaaacatatgatcaaagtggggatcgagccaaatttgtatgcctatactattatggcatcaatttacactgctcaagggaaatttaacatagttgattctatcatcaaggagatggttactactggagttgagcctacagttgttacattcaacgctattattagtggatgtgctcggaatggtatggaaagtgttgcatacgagtggtttcagcgtatgaaaactcaaaacataaccccgaatgaggtaagctatgaagtgctaattgaggctcttgccaatgatggcaagccgaggctagcatatgagttgtatgtgagagctctaactgaaggcctgagtctttctacaaaggcttatgatgcagtcatctcatctacacaggcatatggtgcaagtattgatctaagcattcttggcccccgcccaccagaaaaaaagaaacgagtgcaaatcaggaaaagtttgtctgaattctgtcatatagccgatgttcccagaagaagcaggccctttgacagggaagaaatttttactgctcagacaaaaggaacatgataagcacaactttatattgctagtgtgtgtaagtatacaactcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="73288" stop="71985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72988" g_stop="72285" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E369434" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72988" e_stop="72285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTG</genome_strand>
        <mrna_strand>ATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246190" ref_strand="+" ref_description="SGN-E246190 [cLEF-40-P9]">
      <seq>atggtagagaaaggtgaaaaacctacagttatatcctatggagcgttgctcagtgctctagaaaaaggcaagctctatgatgaagctcttcaggtttggaaacatatgatcaaagtggggatcgagccaaatttgtatgcctatactattatggcatcaatttacactgctcaagggaaatttaacatagttgattctatcatcaaggagatggttactactggagttgagcctacagttgttacattcaacgctattattagtggatgtgctcggaatggtatggaaagtgttgcatacgagtggtttcagcgtatgaaaactcaaaacataaccccgaatgaggtaagctatgaagtgctaattgaggctcttgccaatgatggcaagccgaggctagcatatgagttgtatgtgagagctctaactgaaggcctgagtctttctacaaaggcttatgatgcagtcatctcatctacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="73288" stop="72208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72988" g_stop="72508" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E246190" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72988" e_stop="72508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACAC</genome_strand>
        <mrna_strand>ATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369531" ref_strand="+" ref_description="SGN-E369531 [TUS-23-O23]">
      <seq>ttactcatctatgattagaggttttggtaaagataagaaactgaactctgctatggcacttgtcgagtggttaaggaggaggaggggcaaggacaatattggctctattagcttaaatgtgttcatttataacagtcttttaggtgccataaaagaggcggggaagtatgattttgttgataaagtcatggatgatatggtttcagaaggagtgcagcctaatgttgtgacgtacaatactttaatgagaacttatatagaacaaggtcgggaacttgaagctctcaaacttttcagggagatgccaaagaagggactcactcctagtcctgcatcctattccactgccttgtttgcttatcggagacttgaagatggatttggtgctataactttctttgtcgagacacgagagagatatcaaaatggtgaaataggaaatattgaggaagaaaactgggaggatgaatttgccaagcttgagaatttcatagttcgaatttgctaccaggtgatgcggcagtggctggtaaagggtgaaaatgcaaacaccaatgttctgaaactactaacggatatggatagggctaggctccaactaagtcgtgcagaatatgaacgtctggtgtgggcctgtactcgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="74306" stop="73062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74006" g_stop="73362" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="645" r_length="645" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E369531" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74006" e_stop="73362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGA</genome_strand>
        <mrna_strand>TTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246809" ref_strand="+" ref_description="SGN-E246809 [cLEF-41-G7]">
      <seq>ttactcatctatgattagaggttttggtaaagataagaaactgaactctgctatggcacttgtcgagtggttaaggaggaggaggggcaaggacaatattggctctattagcttaaatgtgttcatttataacagtcttttaggtgccataaaagaggcggggaagtatgattttgttgataaagtcatggatgatatggtttcagaaggagtgcagcctaatgttgtgacgtacaatactttaatgagaacttatatagaacaaggtcgggaacttgaagctctcaaacttttcagggagatgccaaagaagggactcactcctagtcctgcatcctattccactgccttgtttgcttatcggagacttgaagatggatttggtgctataactttctttgtcgagacacgagagagatatcaaaatggtgaaataggaaatattgaggaagaaaactgggaggatgaatttgccaagcttgagaatttcatagttcgaatttgctaccaggtgatgcggcagtggctggtaaagggtgaaaatgcaaacaccaatgttctgaaactactaacggatatggatagggcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="74306" stop="73117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74006" g_stop="73417" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E246809" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74006" e_stop="73417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTA</genome_strand>
        <mrna_strand>TTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487937" ref_strand="+" ref_description="SGN-E487937 [cSTE-27-C15]">
      <seq>cctcgtgccggttgagtggttaaggaggaggagcaaggacaatattggctctattagcttaaatgtgttcatttataacagtcttttaggcaccataaaagaggcggggaagtatgattttgttgataaagtcatggatgatatggtctcagaaggagtgcagcctaatgttgtgacgtacaatactttaatgagaatttatatagaacaaggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="74253" stop="73438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73955" g_stop="73738" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E487937" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>218</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73955" e_stop="73738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTC</genome_strand>
        <mrna_strand>CCTCGTGCCGGTTGAGTGGTTAAGGAGGAGGA-G--CAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGCACCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTCTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAATTTATATAGAACAAGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354425" ref_strand="+" ref_description="SGN-E354425 [cTOS-17-D17]">
      <seq>ttaacaacttttatatttttataagtaaacgaaaatgatcaagttgagatgcaaaaagttcttcagaagcaactcaaaggttgcaagtagtaatgccgtcgtagcagataccaaattaggtggtgaaataaaatgggaattacgtccaggaggtatgttggtacaaaagagagaatgtgcagagaatgatggagattcaattatcacacttagagtctctactgtaactcaatggcatcacatttctatacaaccaacttcatcttttggagaattaaagatggtattggcaatggtaactggtttagaaccaaatgagcaaagactattatacaaagggaaagaaagagaggattgtgaatacttgcacatggtgggggtgaaagacaaagacaaagtgttactctttcaagatccatctatcaaagagaggaaacttgcaacaaatggacatgtccaagatataggatccacttaccacaccatttgtgtctaatgagtaacattattagtgtgtgcaatttcttgccttttctttaaaaaactaaccccctcatccccctccactcccctcctcatcaagaaaatgagtgatgatggatcaagattggtgataagtatatgctcaccaacttagatcgactagattatgtggttgtttttatggtgtgtaatgccaaattttaattttatatgccctggtagcatatatcaaaatttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="81830" stop="83447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82130" g_stop="82398" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290">
            <donor d_prob="0.703" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82689" g_stop="83150" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="732" r_length="463" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E354425" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82130" e_stop="82398"/>
          <exon e_start="82689" e_stop="83150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTGGTAACTTCTCCTTTTTTGGGTCACTTTTACTGTCAAAATACTTTTAACTAGCAGGTCATAATCCAATTTTTTTTTTGAAAGTTTTATTAACTTTTTCCAACTATAATTCCCAGTTTTAAATTTGGTTTTGTGTATTTAAGTTTTGTCCGAGTCAAATTACACTATTTTGACCGACTCAAATAGTAGTCATGTAATTTGTGAAGTCAAACAGATATAACTTGTTACCAATTCATTTAAACTTAACTAGATTTTTGCATTGTTCTAAACTAGTTGTGGTTTATTGATGACAGGAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAA-TTCAAAATTAATGT</genome_strand>
        <mrna_strand>TTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG..................................................................................................................................................................................................................................................................................................GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E538212" ref_strand="+" ref_description="SGN-E538212 [TUS-57-D22]">
      <seq>caacttttatatttttataagtaaacgaaaatgatcaagttgagatgcaaaaagttcttcagaagcaactcaaaggttgcaagtagtaatgccgtcgtagcagataccaaattaggtggtgaaataaaatgggaattacgtccaggaggtatgttggtacaaaagagagaatgtgcagagaatgatggagattcaattatcacacttagagtctctactgtaactcaatggcatcacatttctatacaaccaacttcatcttttggagaattaaagatggtattggcaatggtaactggtttagaaccaaatgagcaaagactattatacaaagggaaagaaagagaggattgtgaatacttgcacatggtgggggtgaaagacaaagacaaagtgttactctttcaagatccatctatcaaagagaggaaacttgcaacaaatggacatgtccaagatataggatccacttaccacaccatttgtgtctaatgagtaacattattagtgtgtgcaatttcttgccttttctttaaaaaactaaccccctcatccccctccactcccctcctcatcaagaaaatgagtgatgatggatcaagattggtgataagtatatgctcaccaacttagatcgactagattatgtggttgtttttatggtgtgtaatgccaaattttaattttatatgccctggtagcatatatcaaaattcaaaattaatgtgtaatctactccagcatctcgattaggttatcgagtttgtaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="81834" stop="83493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82134" g_stop="82398" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290">
            <donor d_prob="0.703" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82689" g_stop="83188" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="765" r_length="500" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E538212" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82134" e_stop="82398"/>
          <exon e_start="82689" e_stop="83188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTGGTAACTTCTCCTTTTTTGGGTCACTTTTACTGTCAAAATACTTTTAACTAGCAGGTCATAATCCAATTTTTTTTTTGAAAGTTTTATTAACTTTTTCCAACTATAATTCCCAGTTTTAAATTTGGTTTTGTGTATTTAAGTTTTGTCCGAGTCAAATTACACTATTTTGACCGACTCAAATAGTAGTCATGTAATTTGTGAAGTCAAACAGATATAACTTGTTACCAATTCATTTAAACTTAACTAGATTTTTGCATTGTTCTAAACTAGTTGTGGTTTATTGATGACAGGAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</genome_strand>
        <mrna_strand>CAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG..................................................................................................................................................................................................................................................................................................GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269176" ref_strand="+" ref_description="SGN-E269176 [cLEI-16-B13]">
      <seq>aacttttatatttttataagtaaacgaaaatgatcaagttgagatgcaaaaagttcttcagaagcaactcaaaggttgcaagtagtaatgccgtcgtagcagataccaaattaggtggtgaaataaaatgggaattacgtccaggaggtatgttggtacaaaagagagaatgtgcagagaatgatggagattcaattatcacacttagagtctctactgtaactcaatggcatcacatttctatacaaccaacttcatcttttggagaattaaagatggtattggcaatggtaactggtttagaaccaaatgagcaaagactattatacaaagggaaagaaagagaggattgtgaatacttgcacatggtgggggtgaaagacaaagacaaagtgttactctttcaagatccatctatcaaagagaggaaacttgcaacaaatggacatgtccaagatataggatccacttaccacaccatttgtgtctaatgagtaacattattagtgtgtgcaatttcttgccttttctttaaaaaactaaccccctcattcccctccactcccctcctcatcaagaaaatgagtgatgatggatcaagattggtgataagtatatgctcaccaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="81835" stop="83352"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82135" g_stop="82398" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290">
            <donor d_prob="0.703" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82689" g_stop="83052" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="628" r_length="364" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E269176" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82135" e_stop="82398"/>
          <exon e_start="82689" e_stop="83052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTGGTAACTTCTCCTTTTTTGGGTCACTTTTACTGTCAAAATACTTTTAACTAGCAGGTCATAATCCAATTTTTTTTTTGAAAGTTTTATTAACTTTTTCCAACTATAATTCCCAGTTTTAAATTTGGTTTTGTGTATTTAAGTTTTGTCCGAGTCAAATTACACTATTTTGACCGACTCAAATAGTAGTCATGTAATTTGTGAAGTCAAACAGATATAACTTGTTACCAATTCATTTAAACTTAACTAGATTTTTGCATTGTTCTAAACTAGTTGTGGTTTATTGATGACAGGAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAAC</genome_strand>
        <mrna_strand>AACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG..................................................................................................................................................................................................................................................................................................GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATTCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550610" ref_strand="+" ref_description="SGN-E550610 [TUS-11-H15]">
      <seq>atcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtactgcccaagatgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtcccagtccccccagattgttccagacatccatgacgatttcctcgccttcgacatgcctttttcgataaatgggcaactgatgagtagcagttcagttgtgcatagagtgccagaagtaattggaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92104" stop="89079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91804" g_stop="91561" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91132" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="557" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89437" g_stop="89379" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="616" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E550610" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91804" e_stop="91561"/>
          <exon e_start="91444" e_stop="91132"/>
          <exon e_start="89437" e_stop="89379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAAATAGATTGCCGGTAATTTATTGATTAATAATTCATTTAAGATAATAATTGGTATCTAATAACCTGCTGTGACATAGAGAGTGAAATTACACTGATTTAGGGTAAATGACATACACATTCATATGAATCCCACTTTGACGTGAGTAGAAAAACTAGGATGGGTACAAAATTAGGGCTCACATAAATATGAAAAATCAAACGGTAAAGAAATCGTTCACTGTTGTTGACCTGTGACTCGGGAAATGCTTTAATTTGACTTAGAAAAATGTTCCATTGCAACTTTAATTTTGCAAAAGATAAGATAAGAATCCTCGAGGCAATTTCAGCTTTGTGTCTGTGTTTCTCTTTCTTCTGGCCTATGAGAATTCCTGTTCTCTTCTTACTACTATAGCTTTTGCAGATTGTTTTTAATTTTCTTGTTTTCATCGAATAGAATAGTTTCTTTTCCTTTTTTCTTTTTTTGTGACAATGGTACTATTTTTACCGGGGCTAAGAATGTGTGCCTCCTACCAGTTGATAATATCACATGAGAATTATTTACTAACGGTGTTAGAAAGAATAATGCATGTATTAGTGTTGTGTATTACTAGTATCTTATTTGATATTTTTATTTATTTATGTATAATTAATGCTTGTGTATTAAGGTCTGCATGTATTTCTAGGTATTAGCAATTCAATGATTTTTGTACATGCATTCAATTGCCCCTCAAAATTTTTTTACATCTTTTTCATCATAAATATGGAGTATCTTTGTAAAAAAATTATTTAATACAATATATATGATTTTTAATACATCAAATCAAATAATACATTAAAATAATTGATGTAAATATACCTAATTCATATATTATTAATATATTATATTTAACATTATAATTATACACTCTATCAAATAATTTTCTTATTATATTTAACATCATCGTATACACTCTATCGAAGGAGGAGATAGTTGTGTGGTTAAATCTAAGGTGAAAGTGGTGGGTCGATAGATGTTAATGTTTAAACTGTGTATAGGACTGACCATATTAAGTGCTGAGCACTTTAATTGTCCTGACCCTTGTGGGCCTACTTTTTACTTAATTAGCTCAACCTTTTCCCCGTCTTTATTCGTCTGCAAGCTGTAGGCTACACCTCCATCAAACCATATAGTAAGAAATAGTAGCTCTCCGTCAAAACTTAATAAAACACGTGTGAATTTTTATCATAATTCTAGCACTAGATAGTCCTAATTTTTAATCCTTTCAGTTAGTTAGGTCCGCTCAATAAAATTTATAATATTATTTAGAAAGACGTTAAACTTATTTTGCAATGTAATAAACTTGCATGATTTTTGGCTAGCTAATAGTAAAAACACAACCCGTAATATGTGTAGACAAAAAAATTTAGTTCAAACTGTAGAGTTTCATATCTTGTGGATGCAAATTAAGAGGACTTGTTTGATTATTGTGTTAAACATGACAAAATGAATTAGATAATTCAGAGGAATTGAGTTGAAAAATGACAAACATTATCATTGTGATTTGTATAGGGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGA</genome_strand>
        <mrna_strand>ATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688182" ref_strand="+" ref_description="SGN-E688182 [t3_tus_11_H15]">
      <seq>atcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtactgcccaagatgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtcccagtccccccagattgttccagacatccatgacgatttcctcgccttcgacatgcctttttcgataaatgggcaactgatgagtagcagttcagttgtgcatagagtgccagaagtaattggaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92104" stop="89079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91804" g_stop="91561" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91132" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="557" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89437" g_stop="89379" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="616" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E688182" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91804" e_stop="91561"/>
          <exon e_start="91444" e_stop="91132"/>
          <exon e_start="89437" e_stop="89379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAAATAGATTGCCGGTAATTTATTGATTAATAATTCATTTAAGATAATAATTGGTATCTAATAACCTGCTGTGACATAGAGAGTGAAATTACACTGATTTAGGGTAAATGACATACACATTCATATGAATCCCACTTTGACGTGAGTAGAAAAACTAGGATGGGTACAAAATTAGGGCTCACATAAATATGAAAAATCAAACGGTAAAGAAATCGTTCACTGTTGTTGACCTGTGACTCGGGAAATGCTTTAATTTGACTTAGAAAAATGTTCCATTGCAACTTTAATTTTGCAAAAGATAAGATAAGAATCCTCGAGGCAATTTCAGCTTTGTGTCTGTGTTTCTCTTTCTTCTGGCCTATGAGAATTCCTGTTCTCTTCTTACTACTATAGCTTTTGCAGATTGTTTTTAATTTTCTTGTTTTCATCGAATAGAATAGTTTCTTTTCCTTTTTTCTTTTTTTGTGACAATGGTACTATTTTTACCGGGGCTAAGAATGTGTGCCTCCTACCAGTTGATAATATCACATGAGAATTATTTACTAACGGTGTTAGAAAGAATAATGCATGTATTAGTGTTGTGTATTACTAGTATCTTATTTGATATTTTTATTTATTTATGTATAATTAATGCTTGTGTATTAAGGTCTGCATGTATTTCTAGGTATTAGCAATTCAATGATTTTTGTACATGCATTCAATTGCCCCTCAAAATTTTTTTACATCTTTTTCATCATAAATATGGAGTATCTTTGTAAAAAAATTATTTAATACAATATATATGATTTTTAATACATCAAATCAAATAATACATTAAAATAATTGATGTAAATATACCTAATTCATATATTATTAATATATTATATTTAACATTATAATTATACACTCTATCAAATAATTTTCTTATTATATTTAACATCATCGTATACACTCTATCGAAGGAGGAGATAGTTGTGTGGTTAAATCTAAGGTGAAAGTGGTGGGTCGATAGATGTTAATGTTTAAACTGTGTATAGGACTGACCATATTAAGTGCTGAGCACTTTAATTGTCCTGACCCTTGTGGGCCTACTTTTTACTTAATTAGCTCAACCTTTTCCCCGTCTTTATTCGTCTGCAAGCTGTAGGCTACACCTCCATCAAACCATATAGTAAGAAATAGTAGCTCTCCGTCAAAACTTAATAAAACACGTGTGAATTTTTATCATAATTCTAGCACTAGATAGTCCTAATTTTTAATCCTTTCAGTTAGTTAGGTCCGCTCAATAAAATTTATAATATTATTTAGAAAGACGTTAAACTTATTTTGCAATGTAATAAACTTGCATGATTTTTGGCTAGCTAATAGTAAAAACACAACCCGTAATATGTGTAGACAAAAAAATTTAGTTCAAACTGTAGAGTTTCATATCTTGTGGATGCAAATTAAGAGGACTTGTTTGATTATTGTGTTAAACATGACAAAATGAATTAGATAATTCAGAGGAATTGAGTTGAAAAATGACAAACATTATCATTGTGATTTGTATAGGGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGA</genome_strand>
        <mrna_strand>ATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271664" ref_strand="+" ref_description="SGN-E271664 [cLEM-23-G12]">
      <seq>gaggatcaaccagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtacctgcccaagatgaccaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtcccagtccccccagattgttccagacatccatgacgatttcctcgccttcgacatgcctttttcgataaatgggcaactgatgagtagcagttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92108" stop="89113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91808" g_stop="91561" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91132" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="564" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89437" g_stop="89413" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="589" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E271664" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91808" e_stop="91561"/>
          <exon e_start="91444" e_stop="91132"/>
          <exon e_start="89437" e_stop="89413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCATCAAC-AGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTA-CTGCCCAAGATGAC-AACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAAATAGATTGCCGGTAATTTATTGATTAATAATTCATTTAAGATAATAATTGGTATCTAATAACCTGCTGTGACATAGAGAGTGAAATTACACTGATTTAGGGTAAATGACATACACATTCATATGAATCCCACTTTGACGTGAGTAGAAAAACTAGGATGGGTACAAAATTAGGGCTCACATAAATATGAAAAATCAAACGGTAAAGAAATCGTTCACTGTTGTTGACCTGTGACTCGGGAAATGCTTTAATTTGACTTAGAAAAATGTTCCATTGCAACTTTAATTTTGCAAAAGATAAGATAAGAATCCTCGAGGCAATTTCAGCTTTGTGTCTGTGTTTCTCTTTCTTCTGGCCTATGAGAATTCCTGTTCTCTTCTTACTACTATAGCTTTTGCAGATTGTTTTTAATTTTCTTGTTTTCATCGAATAGAATAGTTTCTTTTCCTTTTTTCTTTTTTTGTGACAATGGTACTATTTTTACCGGGGCTAAGAATGTGTGCCTCCTACCAGTTGATAATATCACATGAGAATTATTTACTAACGGTGTTAGAAAGAATAATGCATGTATTAGTGTTGTGTATTACTAGTATCTTATTTGATATTTTTATTTATTTATGTATAATTAATGCTTGTGTATTAAGGTCTGCATGTATTTCTAGGTATTAGCAATTCAATGATTTTTGTACATGCATTCAATTGCCCCTCAAAATTTTTTTACATCTTTTTCATCATAAATATGGAGTATCTTTGTAAAAAAATTATTTAATACAATATATATGATTTTTAATACATCAAATCAAATAATACATTAAAATAATTGATGTAAATATACCTAATTCATATATTATTAATATATTATATTTAACATTATAATTATACACTCTATCAAATAATTTTCTTATTATATTTAACATCATCGTATACACTCTATCGAAGGAGGAGATAGTTGTGTGGTTAAATCTAAGGTGAAAGTGGTGGGTCGATAGATGTTAATGTTTAAACTGTGTATAGGACTGACCATATTAAGTGCTGAGCACTTTAATTGTCCTGACCCTTGTGGGCCTACTTTTTACTTAATTAGCTCAACCTTTTCCCCGTCTTTATTCGTCTGCAAGCTGTAGGCTACACCTCCATCAAACCATATAGTAAGAAATAGTAGCTCTCCGTCAAAACTTAATAAAACACGTGTGAATTTTTATCATAATTCTAGCACTAGATAGTCCTAATTTTTAATCCTTTCAGTTAGTTAGGTCCGCTCAATAAAATTTATAATATTATTTAGAAAGACGTTAAACTTATTTTGCAATGTAATAAACTTGCATGATTTTTGGCTAGCTAATAGTAAAAACACAACCCGTAATATGTGTAGACAAAAAAATTTAGTTCAAACTGTAGAGTTTCATATCTTGTGGATGCAAATTAAGAGGACTTGTTTGATTATTGTGTTAAACATGACAAAATGAATTAGATAATTCAGAGGAATTGAGTTGAAAAATGACAAACATTATCATTGTGATTTGTATAGGGGCAACTGATGAGTAGCAGTTCAG</genome_strand>
        <mrna_strand>GAGGATCAACCAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACCTGCCCAAGATGACCAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACTGATGAGTAGCAGTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345307" ref_strand="+" ref_description="SGN-E345307 [cTOF-13-J2]">
      <seq>aaaagccgaaacaaggtgaagcgcagaaaaccaaagttcctgagcctaagtgtggagctatcagagaaaaaaccccagaagtcagatgataggatggtttcatcatccaacggtagcacacatgatcatcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtactgcccaagatgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtaccagtccccccagattgttccagacatccatgacgatttcctcgcctgcgacatgcctttttcgataatgggcaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92231" stop="90831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91931" g_stop="91561" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91132" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="684" r_length="313" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91131" i_stop="90866" i_length="266">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.681" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90865" g_stop="90858" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="692" r_length="8" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E345307" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91931" e_stop="91561"/>
          <exon e_start="91444" e_stop="91132"/>
          <exon e_start="90865" e_stop="90858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAAATAGATTGCCGGTAATTTATTGATTAATAATTCATTTAAGATAATAATTGGTATCTAATAACCTGCTGTGACATAGAGAGTGAAATTACACTGATTTAGGGTAAATG</genome_strand>
        <mrna_strand>AAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTACCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTGCGACATGCCTTTTTCGATAATG..........................................................................................................................................................................................................................................................................GGCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219362" ref_strand="+" ref_description="SGN-E219362 [cLEL-11-D21](-)">
      <seq>ggaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagagtacgaggaaggatgaagaagtaagtagttgtccgtggaacaaacggcaacaacaattgtcactaaagcttgattatgacgaaatattgaatgcttggtccgataaaggtccactttaccttcagtcccagtccccccagattgttccagacatccatgacgatttcctcgccttcgacatgcctttttcgataaatgttagtttttcttaccttacttttaaatttatgttatcaggtcatttaaacgatttctaatttgcggaaaggataaccttttagaaccaaacataatgtaatgttgtagctatgtgatttgatgaaatattattgatatttcactatctaatacacctaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="91696" stop="90660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91395" g_stop="90965" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="432" polyA_stop="445"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E219362" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91395" e_stop="90965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAA</genome_strand>
        <mrna_strand>GGAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267056" ref_strand="+" ref_description="SGN-E267056 [cLEI-4-O7]">
      <seq>aaaagccgaaacaaggtgaagcgcagaaaaccaaaggtcctgagcctaagtgtggagctatcagagaaaaaaccccagaagtcagatgataggatggtttcatcatccaacggtagcacacatgatcatcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacagtactagtactgcccaagatgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagcgttcccaattacatggcagtttcgtcatcggaggccagcctcacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaaaacagggaagaagagaaatgggttgtttactcagacgttgttgatttggatcaacatagtgagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92231" stop="91028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91931" g_stop="91561" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91328" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="488" r_length="117" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E267056" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91931" e_stop="91561"/>
          <exon e_start="91444" e_stop="91328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAG</genome_strand>
        <mrna_strand>AAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGGTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359120" ref_strand="+" ref_description="SGN-E359120 [cLHT-11-J8]">
      <seq>aaacattacactttttgagtactattcttccaaaaaaaaataaaataatggagtcaatcgattataattgttgttattatgcatatgtccgatgccggatgccggtcaaagaatggtaaatagaaaagccgaaacaaggtgaagcgcacaaaaccaaagttcctgagcctaagtgtggagctatcggagaaaaaaccccagaactcagatgatataatggattcatcatccaacggtagcacacatgatcatcaacagctcaatctgttcccactgcacccagaaaatttattagatgataaagacggtactagtactgtccaagacgacaacgtagctctcttctttgctggcgctgaaaacagcgccactacactcaacgaagttcttgtttcttcaaaggatgaaattgacagcaacataagtactagtgttccgaattacatgacagtttcgtcatcggaggccagccttacatttgccgacacttacaggggacaagaaggtgagcttgtacggacggctctgaggaacaaagagagggaacacagggaagaagagaaatgggttggttactcagacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="92358" stop="91054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92058" g_stop="91561" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91444" g_stop="91354" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="585" r_length="91" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E359120" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92058" e_stop="91561"/>
          <exon e_start="91444" e_stop="91354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAGGTACTCTAGAGGCCGGAGTCATTTTTTTTTATAAGTATTTAATTAAATATAGATCGAATAACGATGGAACAATATGATCGATTTTCTTTTAAATTCGAAATTTGTTTTTTTTATAGGGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTT</genome_strand>
        <mrna_strand>AAACATTACACTTTTTGAGTACTATTCTTCCAAAAAAAAA--TAAA-A-TAATGGAGTCAATCGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATAGAAAAGCCGAAACAAGGTGAAGCGCACAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCGGAGAAAAAACCCCAGAACTCAGATGATATAATGGATTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACGGTACTAGTACTGTCCAAGACGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGTGTTCCGAATTACATGACAGTTTCGTCATCGGAGGCCAGCCTTACATTTGCCGACACTTACAG....................................................................................................................GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAACACAGGGAAGAAGAGAAATGGGTTGGTTACTCAGACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745005" ref_strand="+" ref_description="SGN-E745005 [GI|19161]">
      <seq>tttactcaactcaacacaatatattcttttctacccccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatcgattgctggcgatgcaaccccaattgggaaaaaaatcgccagcgtttagctattgcgccattgggtttggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccctaaacccggaaccctgagacatgctgttatacaagacgagcctttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaactcttataagaccatagatggtcgtggtgcgagtgttcacatttcaggtggtccgtgcattacaatccaccataccagcaacattataatacacgggattaatatacacgattgtaaacagagtggtaacggcaacattagggactcaccaaaccattccggatggtgggatgtttctgatggtgatggtatttcaatttttggagggaaaaacatttgggtggaccattgttcgttgtctaattgccacgacggtttaattgatgcaattcacggatctacagcaatcacgatatctaacaactatttcactcatcatgacaaggtgatgttgttgggacatagtgattcttttacacaggacaaaggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaagaatgccaaggtgcagacatggttacttccatgtggttaataatgactatactcactgggaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggaaacagatttcttgctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcagtggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcaggcaaacaggggcaggtgcatcatcatcatctacttatgccagagcttcaagcttaagcgctaggccttcttctttagttggatcaattaccacaaatgccggtcctgttaactgcaaaaaaggctctcgctgctagtaaatttaaatccagtggctactaaatttatttcaaaatggagaatgtacgatgactagttgacgatagtgaaagaagtagtgttttaattaagctgaaaatggtgtacggaaaatatatggagaccatttcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95659" stop="98151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95959" g_stop="96111" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96557" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="518" r_length="365" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96633" g_stop="97153" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="1039" r_length="521" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97490" g_stop="97851" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1040" r_stop="1401" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E745005" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95959" e_stop="96111"/>
          <exon e_start="96193" e_stop="96557"/>
          <exon e_start="96633" e_stop="97153"/>
          <exon e_start="97490" e_stop="97851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACTCAACTCAACACAATATATTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGAT-GATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAGGTCAAAAGCAGATCCAGACTTGATATTTCATTATTTTCTAAAAATTTATTATATAGTCGATTAACATTGTTTCAGGTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGC</genome_strand>
        <mrna_strand>TTTACTCAACTCAACACAATATATTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATCGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCT-ATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAG...........................................................................GTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E336410" ref_strand="+" ref_description="SGN-E336410 [cTOE-4-G23]">
      <seq>tcttttctacccccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctggcgatgcaaccccaattgggaaaaaaatcgccagcgtttagctgattgcgccattgggtttggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccctaaacccggaaccctgagacatgctgttatacaagacgagcctttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaactcttataagaccatagatggtcgtggtgcgagtgttcacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95683" stop="96854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95983" g_stop="96111" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96554" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="491" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E336410" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95983" e_stop="96111"/>
          <exon e_start="96193" e_stop="96554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTT</genome_strand>
        <mrna_strand>TCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391698" ref_strand="+" ref_description="SGN-E391698 [TUS-27-H22]">
      <seq>ccccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctggcgatgcaaccccaattgggaaaaaaaatcgccagcgtttagctgattgcgccattgggtttggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcacggaaagatgaccccgtgaaaccctaaacccggaacccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95693" stop="96722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95993" g_stop="96111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96424" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="353" r_length="234" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E391698" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95993" e_stop="96111"/>
          <exon e_start="96193" e_stop="96424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGG-AAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTG-AACCCTAAACCCGGAACCCTG</genome_strand>
        <mrna_strand>CCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCACGGAAAGATGACCCCGTGAAACCCTAAACCCGGAACCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E394094" ref_strand="+" ref_description="SGN-E394094 [TUS-40-H21]">
      <seq>ccccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctggcgatgcaaccccaattgggaaaaaaaatcaccagcgtttagctgattgcgccattgggtttggaaaaaatgctatcggaggaaaaagtggccgaatttacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95693" stop="96671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95993" g_stop="96111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96371" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="299" r_length="180" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E394094" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95993" e_stop="96111"/>
          <exon e_start="96193" e_stop="96371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAA-AAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACG</genome_strand>
        <mrna_strand>CCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAAATCACCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAAAATGCTATCGGAGGAAAAAGTGGCCGAATTTACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329587" ref_strand="+" ref_description="SGN-E329587 [cTOD-3-E9]">
      <seq>cccacaccattaaaaatatgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagttcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctggcgatgcaaccccaattgggaaaaaaaatcgccagcgtttagctgattgcgccattgggtttggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccctaaacccggaaccctgagacatgctgttatacaagacgagcctttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaactcttataagaccatagatggtcgtggtgcgagtgttcacatttcaggtggtccgtgcattacaatccaccataccagcaacattataatacacgggattaatatacacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95694" stop="96996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95994" g_stop="96111" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96557" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="484" r_length="366" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96633" g_stop="96696" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="548" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E329587" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95994" e_stop="96111"/>
          <exon e_start="96193" e_stop="96557"/>
          <exon e_start="96633" e_stop="96696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGG-AAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAGGTCAAAAGCAGATCCAGACTTGATATTTCATTATTTTCTAAAAATTTATTATATAGTCGATTAACATTGTTTCAGGTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGA</genome_strand>
        <mrna_strand>CCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAG...........................................................................GTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425437" ref_strand="+" ref_description="SGN-E425437 [STM-45-G9]">
      <seq>ttttctatctacagggctctgctttaatgtctacttttctcttcatattttccctccttcttctagccccactgctcgtaattagttctatccaagacccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgacgattgctggcgatgcgaccccaattgggagaaaaatcgccagcgattagctgattgcgccattggctttggaaagaatgctattggggggaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccccaaacccggaactctaagacatgctgttatacaagacgagcctttatggatcattttcaaaagggatatggtcattcaactcaaacaagagctcgtcatgaactcttataagaccatagatggtcgtggcgcgagtgttcacatttcaggtggtccgtgcattacaatccaccacacgagtaacattataatacacgggattaatatacacgattgtaaacagagtggtaacggcaacattagggactcaccaaaccattccggatggtgggatgtttctgacggtgacggtatatcaattttcggagggaagaatatttgggtggaccattgttccttgtctaattgccacgatggtttaattgatgcaattcatggatctacagncatcacgatttctaacactatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95711" stop="97196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96011" g_stop="96111" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="127" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96557" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="492" r_length="365" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96633" g_stop="96896" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="755" r_length="263" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E425437" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96011" e_stop="96111"/>
          <exon e_start="96193" e_stop="96557"/>
          <exon e_start="96633" e_stop="96896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAGGTCAAAAGCAGATCCAGACTTGATATTTCATTATTTTCTAAAAATTTATTATATAGTCGATTAACATTGTTTCAGGTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCA</genome_strand>
        <mrna_strand>ATGTCTACTTTTCTCTTCATATTTTCCCTCCTTCTTCTAGCCCCACTGCTCGTAATTAGTTCTATCCAAGACCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGACGATTGCTGGCGATGCGACCCCAATTGGGAGAAAAATCGCCAGCGATTAGCTGATTGCGCCATTGGCTTTGGAAAGAATGCTATTGGGGGGAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCCAAACCCGGAACTCTAAGACATGCTGTTATACAAGACGAGCCTTTATGGATCATTTTCAAAAGGGATATGGTCATTCAACTCAAACAAGAGCTCGTCATGAACTCTTATAAGACCATAGATGGTCGTGGCGCGAGTGTTCACATTTCAG...........................................................................GTGGTCCGTGCATTACAATCCACCACACGAGTAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGACGGTGACGGTATATCAATTTTCGGAGGGAAGAATATTTGGGTGGACCATTGTTCCTTGTCTAATTGCCACGATGGTTTAATTGATGCAATTCATGGATCTACAGNCATCACGATTTCTAAC-ACTATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454635" ref_strand="+" ref_description="SGN-E454635 [cSTS-23-N14]">
      <seq>ttttctatctacagggctctgctttaatgtctacttttctcttcatattttccctccttcttctagccccactgctcgtaattagttctatccaagacccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattgacgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgacgattgctggcgatgcgaccccaattgggagaaaaatcgccagcgattagctgattgcgccattggctttggaaagaatgctattggggggaaaaatggccgaatttacgtggttactgattcagggaacgatgaccccgtgaaccccaaacccggaactctaagacatgctgttatacaagacgagcctttatggatcattttcaaaagggatatggtcattcaactcaaacaagagctcgtcatgaactcttataagaccatagatggtcgtggcgcgagtgttcacatttcaggtggtccgtgcattacaatccaccacacgagtaacattataatacacgggattaatatacacgattgtaaacagagtggtaacggcaacattagggactcaccaaaccattccggatggtgggatgtttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="95711" stop="97063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96011" g_stop="96111" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="127" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96193" g_stop="96557" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="492" r_length="365" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96633" g_stop="96763" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="623" r_length="131" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E454635" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E454635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96011" e_stop="96111"/>
          <exon e_start="96193" e_stop="96557"/>
          <exon e_start="96633" e_stop="96763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAGGTAACACAAAAACCACTGCCGACTTCTATTTTTATTCAATTTATTAGTATTTACTAATTTTATTTTGGTTATTTTGAACAGGAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAGGTCAAAAGCAGATCCAGACTTGATATTTCATTATTTTCTAAAAATTTATTATATAGTCGATTAACATTGTTTCAGGTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCT</genome_strand>
        <mrna_strand>ATGTCTACTTTTCTCTTCATATTTTCCCTCCTTCTTCTAGCCCCACTGCTCGTAATTAGTTCTATCCAAGACCCAGAACTTGTTGTACAAGACGTTCATAG.................................................................................GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGACGATTGCTGGCGATGCGACCCCAATTGGGAGAAAAATCGCCAGCGATTAGCTGATTGCGCCATTGGCTTTGGAAAGAATGCTATTGGGGGGAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCCAAACCCGGAACTCTAAGACATGCTGTTATACAAGACGAGCCTTTATGGATCATTTTCAAAAGGGATATGGTCATTCAACTCAAACAAGAGCTCGTCATGAACTCTTATAAGACCATAGATGGTCGTGGCGCGAGTGTTCACATTTCAG...........................................................................GTGGTCCGTGCATTACAATCCACCACACGAGTAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425438" ref_strand="-" ref_description="SGN-E425438 [STM-45-G9]">
      <seq>atcatgataagggatgttgttggacatagtgatcttttacacaggaccaaggcatgcaagtcacagttgctttaatcattttggtgaagggtggtgcaaagaatgccaaggtgtagacatggttatttccatgtggtgaataatgactatactcactgggaaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggcaataggtttcttgctcccaatgaaaaaataccgcaaagaggtgacaaaccatgaggatgcaccagaaagtcagtggagaagctggaactggagatcagaaaggtgatttgatgttaaatggagcgtatttcaggcaaacaggggcaggtgcatcatcatctacttatgccagagcttcaagcttaagcgctaggccttcttctttagttggatcaatcaccacaaatgccggtcctattaactgcaaaaaaggctcccgctgctagtaaatggccactaaatttattttacaagggagaacttacgattactagatgacgatagtgaaagaagtagtgttttaattaagctgaaaatggtacggaaaatatatggagaccatttcgcaaaacttatatttcaatcgttttctttttctaaatttttcgaggacagactattactactaattattgtcctttggacgtttgtttgttccttgatacagtgaatatcttgggttttccctaaaaaaaaaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="96600" stop="98250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96900" g_stop="97153" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97490" g_stop="97940" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="688" r_length="437" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="720" polyA_stop="731"/>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E425438" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425438" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="96900" e_stop="97153"/>
          <exon e_start="97490" e_stop="97940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGG-AAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATG-AAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAG-AAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTC-ATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTA</genome_strand>
        <mrna_strand>ATCATGATAAGG-GATGTTGTT-GGACATAGTGA-TCTTTTACACAGGACCAAGGCATGCAAGTCACAGTTGC-TTTAATCATTTTGGTGAAGGG-TGGTGCAAAGAATGCCAAGGTGTAGACATGGTTATTTCCATGTGGTGAATAATGACTATACTCACTGGGAAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGCAATAGGTTTCTTGCTCCCAATGAAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAACCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTG---CATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATCACCACAAATGCCGGTCCTATTAACTGCAAAAAAGGCTCCCGCTGCTAG------T-AA---A-TGGCCACTAAATTTATTTTACAAGGGAGAACTTACGATTACTAGATGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAAT-G-GTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATTTCAATCGTTTTCTTTTTCTAAATTTTTCGAGGACAGACTATTACTACTAATTATTGTCCTTTGGACGTTTGTTTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404122" ref_strand="+" ref_description="SGN-E404122 [PPC-12-B6]">
      <seq>agaatgccaaggtgtagacatggttatttccatgtggtcaataatgactatactcactgggaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggcaataggtttcttgctccctatgaaaaataccgcaaagaggtgacaaagcatgaggatgctccagaaagtcagtggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcaggcaaacaggggcaggtgcatcatcatctacttatgccagagcttcaagcttaagcgctaggccttcttctttagttggatcaatcaccacaaatgccggtcctattaactgcaaaaaaggctcccgctgctagtaaatggccactaaatttattttacaagggagaacttacgattactagatgacgatagtgaaagaagtagtgttttaattaagctgaaaatggtacggaaaatatatggagaccatttcgcacaacttatatttcaatcgttttctttttctcaaattttcgaggacagactattactactaattattgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="96704" stop="98220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97004" g_stop="97153" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97490" g_stop="97920" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="566" r_length="416" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E404122" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.027" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97004" e_stop="97153"/>
          <exon e_start="97490" e_stop="97920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTC-ATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTC</genome_strand>
        <mrna_strand>AGAATGCCAAGGTGTAGACATGGTTATTTCCATGTGGTCAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGCAATAGGTTTCTTGCTCCCTATGAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAAGCATGAGGATGCTCCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTG---CATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATCACCACAAATGCCGGTCCTATTAACTGCAAAAAAGGCTCCCGCTGCTAG------T-AA---A-TGGCCACTAAATTTATTTTACAAGGGAGAACTTACGATTACTAGATGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAAT-G-GTACGGAAAATATATGGAGACCATTTCGCACAACTTATATTTCAATCGTTTTCTTTTTCTCAAATTTTCGAGGACAGACTATTACTACTAATTATTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E433653" ref_strand="+" ref_description="SGN-E433653 [STM-58-F12]">
      <seq>agatgccaaggtgtagacatggttatttccatgtggtcaataatgactatactcactgggaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggcaataggtttcttgctccctatgaaaaataccgcaaagaggtgacaaagcatgaggatgctccagaaagtcagtggagaagctggaactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="96705" stop="97840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97004" g_stop="97153" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97490" g_stop="97540" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="200" r_length="51" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E433653" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>201</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97004" e_stop="97153"/>
          <exon e_start="97490" e_stop="97540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGG</genome_strand>
        <mrna_strand>AG-ATGCCAAGGTGTAGACATGGTTATTTCCATGTGGTCAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGCAATAGGTTTCTTGCTCCCTATGAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAAGCATGAGGATGCTCCAGAAAGTCAGTGGAGAAGCTGGAACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354365" ref_strand="+" ref_description="SGN-E354365 [cTOS-17-K21]">
      <seq>gcagacatggttacttccatgtggttaataatgactatactcactgggaaatgtatgccattggtggtagtgctgcacctactattaatagccaaggaaacagatttcttgctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcagtggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcaggcaaacaggggcaggtgcatcatcatcatctacttatgccagagcttcaagcttaagcgctaggccttcttctttagttggatcaattaccacaaatgccggtcctgttaactgcaaaaaaggctctcgctgctagtaaatttaaatccagtggctactaaatttatttcaaaatggagaatgtacgatgactagttgacgatagtgaaagaagtagtgttttaattaagctgaaaatggtgtacggaaaatatatggagaccatttcgcaaaacttatatctcatcgttttctttttctcaatttttccatgaaaaactattactactaattattgtcatttgaacgtttgtttcttaatatagtgactatcttgcgtttttcctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="96717" stop="98271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97017" g_stop="97153" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97490" g_stop="97978" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="626" r_length="489" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E354365" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97017" e_stop="97153"/>
          <exon e_start="97490" e_stop="97978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAGGTATTTCAATTCATCAGTGAACATGAAATGATATACTAGTTACAGAGAAATTATTTTCCTTTGACCATCATATTTAAACAAAAAAAGTTTAGTTGAAAAATAATACCTACCTTGCAAATAAATTATAAAGTTGGTATTGAATTCTCTTCATATAAAACAGGAAATTCTAGTTAAAGGGTTTGAAAATTGCTACTTTTGAATCCACTTGTACAAATTTTTGGCTCGGCGCTGACATATATTATTTCCCAATATCCTAATTTTTTTAGGCTTGAACGTCGTTATCTTTTAGAATTTGAAATGTGGTAAGATTATGCTAAATATTTGAAAATTTAACAGGTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTAATATGTTCCT</genome_strand>
        <mrna_strand>GCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAG................................................................................................................................................................................................................................................................................................................................................GTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362584" ref_strand="+" ref_description="SGN-E362584 [cLPP-1-D15]">
      <seq>aacttttttccatcaaaaagaagaaaaaaaatcaaaaaataaaaaagtagtaaaaatggctcgtcaagttattgttttggctctggtatttgttgccattgctggatttgcttcggcagataattccccaagcagttcccctgctgcatccccatccacatcagcaacaacccccgcaacatcaccatccacatcagcaacatcccctgcatcatcaccatccacatccactccagcagcagcttcaccaaacagcgctagtgctaatgcacctgctgccgcacccacaaccccatcatcctctccaaaggcaagtaccccatcatcatcatctccatcatcatcaccatccccatcatcatcagcatcatctcctaaatcttcaaattccggttctgtttcttcttcctcttctccaacttcaactgccgaaactccggaagtagaacccgcatcaccaccatctcccgacagcgaaactactaccgctaccgctcccgccacttctacacctgctgaggcacccgccgccgacgccagtggcgcagctacattgaaggctgtctcctctgtttttgctgctgcagtcgctgccgcattcttcttctaattgattcattaatcaatactattttttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="100443" stop="99222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100159" g_stop="99522" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E362584" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100159" e_stop="99522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTTTTCCATCAAAAAGAAGAAAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCAT---CAT-C-CA--CA--CCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTTCTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAA</genome_strand>
        <mrna_strand>AACTTTTTTCCATCAAAAAGAAG--AAAAAAAATC-AAAAAATAAAAAAGTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGGATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCCCCATCCACATCAGCAACAACCCCCGCAACATCACCATCCACATCAGCAACATCCCCTGCATCATCACCATCCACATCCACTCCAGCAGCAGCTTCACCAAACAGCGCTAGTGCTAATGCACCTGCTGCCGCACCCACAACCCCATCATCCTCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCA---TCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCCTCTTCTCCAACTTCAACTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTACTACCGCTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCTGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363151" ref_strand="+" ref_description="SGN-E363151 [cLPP-19-H22]">
      <seq>ttgttttggctctggtatttgttgccattgctggatttgcttcggcagataattccccaagcagttcccctgctgcatccccatccacatcagcaacaacccccgcaacatcaccatccacatcagcaacatcccctgcatcatcaccatccacatccactccagcagcagcttcaccaaacagcgctagtgctaatgcacctgctgccgcacccacaaccccatcatcctctccaaaggcaagtaccccatcatcatcatctccatcatcatcaccatccccatcatcatcagcatcatctcctaaatcttcaaattccggttctgtttcttcttcctcttctccaacttcaactgccgaaactccggaagtagaacccgcatcaccaccatctcccgacagcgaaactactaccgctaccgctcccgccacttctacacctgctgaggcacccgccgccgacgccagtggcgcagctacattgaaggctgtctcctctgtttttgctgctgcagtcgctgccgcattcttcttctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="100385" stop="99252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100085" g_stop="99552" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E363151" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100085" e_stop="99552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCAT---CAT-C-CA--CA--CCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTTCTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAAT</genome_strand>
        <mrna_strand>TTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGGATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCCCCATCCACATCAGCAACAACCCCCGCAACATCACCATCCACATCAGCAACATCCCCTGCATCATCACCATCCACATCCACTCCAGCAGCAGCTTCACCAAACAGCGCTAGTGCTAATGCACCTGCTGCCGCACCCACAACCCCATCATCCTCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCA---TCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCCTCTTCTCCAACTTCAACTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTACTACCGCTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCTGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422695" ref_strand="+" ref_description="SGN-E422695 [STM-40-H16]">
      <seq>aacttaaattggttttttattaagaaaatttttccgtaacttctttttgacctattactatcggttcttcagagttcagatcattgtcgataataacaacaacaagttatcgatccgttcttcagagttcagataattgtaaataacagcaacaactagctatagatgtggaagagatttctcaagagttcttcagaattgccctaaaagcttctaagatgatggcttatctatgttagactgcaacactttcacaaagcctgaccaataaatcccaaacatacatctctactcgggatgaaaaaaggttcattattcctaaaacatgatttagcaatcgaaattgagctatattttcaacccaaaatggtgatggacatgggaaaaaggactatctttcagtcagaaacaattaacattacgctggaaagggacatcaaatttcacctatgcctttgtcttcctcctcaagcgcttccttagcttcttcaacttgtgcttattcatcttcttcttcctctttttcttcacactatccgcccatatcttcagtgaatcttcttctacgacgacgcatccatcattctcagatttaattaccccaatttgagaaatgggggtttaggaaaagcccgaaagagaaacttggataaaccagcgagcaaggggaaacattctgatttgaatcctctgtttcgcgttggagacaaaaggggtatttgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="105024" stop="106229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105245" g_stop="105929" g_length="685"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="727" r_length="688" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E422695" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105245" e_stop="105929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTTTTACCTATTATTATCAGTTCTTCAGTGTTCAGATCATTGTAGATAATAACAACAAGAAGCTATCGATCCGTGTTCTTCAGAGTTCAGATAATTGTAAATAACAGCAACAACTATCTATAGATGTGGAAGA-ATTTCTCAAAAGTTCTTCAGAATTGCTCTAAAAGCTTCTAAGATGATGGCTTATCTATGTTAGACTGCAACAGTTACACAAAGCCTGACCAATAAATCCCAAACATACATCTCTACTCGGGA-GGAAAAAGGTTCATTATTCCTAAAACATGATTTAGCAATCGAAATTGAGCAATATTTTCAACTCAAAATGGCGA-GGACATGGGAAAAAGGACTATCTTTCAGTCAGAAACAATTAACATTATGCCGGAAAGGGACATCAAATTTCACCTATGCCTTTGTCTTCCTCCTCAAGCGCTTCCTCAGCTTCTTCAACTTGTGCTTGTTCATCTTCCTCTTCCTCTTTTTCTTCACACTATCCGCCCATATCTTAAGTGAATCTTCTCCTACGACGACGCCTCCATCATTCTCAGATTTAACTACCCCAATTTGAGAAAT-GGGGTTTAGGAAAACACCGAAAGGGAAACTTGGATAAACCAGTGGGCAAGGGGAAACCTTCTGATTTGGATCCTCTGTTTCGCGTTGGAGACAAAA-GGGTATTTGATTTC</genome_strand>
        <mrna_strand>CTTCTTTTTGACCTATTACTATCGGTTCTTCAGAGTTCAGATCATTGTCGATAATAACAACAACAAGTTATCGATCC--GTTCTTCAGAGTTCAGATAATTGTAAATAACAGCAACAACTAGCTATAGATGTGGAAGAGATTTCTCAAGAGTTCTTCAGAATTGCCCTAAAAGCTTCTAAGATGATGGCTTATCTATGTTAGACTGCAACACTTTCACAAAGCCTGACCAATAAATCCCAAACATACATCTCTACTCGGGATGAAAAAAGGTTCATTATTCCTAAAACATGATTTAGCAATCGAAATTGAGCTATATTTTCAACCCAAAATGGTGATGGACATGGGAAAAAGGACTATCTTTCAGTCAGAAACAATTAACATTACGCTGGAAAGGGACATCAAATTTCACCTATGCCTTTGTCTTCCTCCTCAAGCGCTTCCTTAGCTTCTTCAACTTGTGCTTATTCATCTTCTTCTTCCTCTTTTTCTTCACACTATCCGCCCATATCTTCAGTGAATCTTCTTCTACGACGACGCATCCATCATTCTCAGATTTAATTACCCCAATTTGAGAAATGGGGGTTTAGGAAAAGCCCGAAAGAGAAACTTGGATAAACCAGCGAGCAAGGGGAAACATTCTGATTTGAATCCTCTGTTTCGCGTTGGAGACAAAAGGGGTATTTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422694" ref_strand="+" ref_description="SGN-E422694 [STM-40-H16]">
      <seq>tcggaaagctctgaagaaccaatttcaatctgccacaacaagattcatcactaaccttaataaatccgaaccggcaatcctcagttctacccctcctcagccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggattcaaatcagaatgtttccccttgctcgctggtttatccaagtttctctttcgggcttttcctaaaccccatttctcaaattggggtaattaaatctgagaatgatggatgcgtcgtcgtagaagaagattcactgaagatatgggcggatagtgtgaagaaaaagaggaagaagaagatgaataagcacaagttgaagaagctaaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccagcgtaatgttaattgtttctgactgaaagatagtcctttttcccatgtccatcaccattttgggttgaaaatatagctcaatttcgattgctaaatcatgttttaggaataatgaaccttttttcatcccgagtagagatgtatgttttgggatttattggtcaggctttgtgaaagtgttgcagtctaacatagataagccatcatcttagaagcttttagggcaattctgaagaactcttgagaaatctcttcacatctatagctagttgttgctgttatttacaatatctgaactctgaagaaggatcgattaacttgttgttgttattatcgacaatgatctgaactctgaagaaccgatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106363" stop="105025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106063" g_stop="105263" g_length="801"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="801" r_length="801" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E422694" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106063" e_stop="105263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCC-TCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACC-TTTTTCCTCCCGAGTAGAGATGTATG-TTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAAT-TCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGA-TAGCTTCTTGTTGTTATTATCTACAATGATCTGAACACTGAAGAACTGATAA</genome_strand>
        <mrna_strand>TCGGAAAGCTCTGAAGAACCAATTTCAATCTGCCACAACAAGATTCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCCCTCCTCAGCCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATTCAAATCAGAATGTTTCCCCTTGCTCGCTGGTTTATCCAAGTTTCTCTTTCGGGCTTTTCCTAAACCCCATTTCTCAAATTGGGGTAATTAAATCTGAGAATGATGGATGCGTCGTCGTAGAAGAAGATTCACTGAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAAGAAGATGAATAAGCACAAGTTGAAGAAGCTAAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCAGCGTAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCATCACCATTTTGGGTTGAAAATATAGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTTCATCCCGAGTAGAGATGTATGTTTTGGGATTTATTGGTCAGGCTTTGTGAAAGTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGGGCAATTCTGAAGAACTCTTGAGAAATCTCTT-CACATCTATAGCTAGTTGTTGCTGTTATTTACAA-TATCTGAACTCTGAAG-A-A-GGATCGATTAACTTGTTGTTGTTATTATCGACAATGATCTGAACTCTGAAGAACCGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357603" ref_strand="+" ref_description="SGN-E357603 [cTOS-24-A21]">
      <seq>ttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttgggatttattggtcaggctttgtgtaactgttgcagtctaacatagataagccatcatcttagaagcttttagagcaattctgaagaacttttgagaaattcttccacatctatagatagttgttgctgttatttacaattatctgaactctgaagaacacggatcgatagcttcttgttgttattatctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106243" stop="104989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105943" g_stop="105284" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E357603" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105943" e_stop="105284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCTACAATGATC</genome_strand>
        <mrna_strand>TTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611553" ref_strand="+" ref_description="SGN-E611553 [61306]">
      <seq>tggtggttcttgaattgttactccatatggcttcaattcttcggaaagctctgaagaaccaatttcaatctgccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacccctcctcagccaccaatcttggctcatccttcttgtagcagacggaatcaaatacccttttgtctccaacgcgaaacagaggattcaaatcagaatgtttccccttgctcactggtttacccaagtttctctttcgggcttttcctaaaccccatttctcaaattggggtaattaaatctgagaatgatggaggcgtcgtcgtagaagaagattcactgaagatatgggcggatagtgtgaagaaaaagaggaagaagaagatgaataagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccagcgtaatgttaattgtttctgactgaaagattgtcctttttcccatgtccatcaccattttgggttgaaaatatagctcaatttcgattgctaaatcatgttttaggaataatgaaccttttttcatcccgagtagagatgtatgtttgggatttattggtcaggctttgtggaagtgttgcagtctaacatcttagaagcttttaggaaaattctgaagaactcttgagaaatctcttccacatctatagctagttgttgctgttatttacagttatctgaactctgaagaacggatcgataacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106403" stop="105024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106103" g_stop="105308" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E611553" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106103" e_stop="105308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCC-TCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACC-TTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAAT-TCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTC</genome_strand>
        <mrna_strand>TGGTGGTTCTTGAATTGTTACTCCATATGGCTTCAATTCTTCGGAAAGCTCTGAAGAACCAATTTCAATCTGCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCCCTCCTCAGCCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGGAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATTCAAATCAGAATGTTTCCCCTTGCTCACTGGTTTACCCAAGTTTCTCTTTCGGGCTTTTCCTAAACCCCATTTCTCAAATTGGGGTAATTAAATCTGAGAATGATGGAGGCGTCGTCGTAGAAGAAGATTCACTGAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAAGAAGATGAATAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCAGCGTAATGTTAATTGTTTCTGACTGAAAGATTGTCCTTTTTCCCATGTCCATCACCATTTTGGGTTGAAAATATAGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTTCATCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGGAAGTGTTGCAG--T--C-----T-A---A-CATCTTAGAAGCTTTTAGGAAAATTCTGAAGAACTCTTGAGAAATCTCTTCCACATCTATAGCTAGTTGTTGCTGTTATTTACAGTTATCTGAACTCTGAAG-A-ACGGATCGATAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317790" ref_strand="+" ref_description="SGN-E317790 [cTOA-30-I20]">
      <seq>ttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttgggatttattggtcaggctttgtgtaactgttgcagtctaacatagataagccatcatcttagaagcttttagagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106406" stop="105106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106106" g_stop="105406" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="701" r_length="701" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E317790" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106106" e_stop="105406"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCA</genome_strand>
        <mrna_strand>TTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317961" ref_strand="+" ref_description="SGN-E317961 [cTOA-30-K18]">
      <seq>ttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttacgaataatgaacctttttcctcccgagtagagatgtatgtttgggatttattggtcacgctttgtgtaactgttgcagtctaacatagataaagcatcatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106406" stop="105122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106106" g_stop="105422" g_length="685"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="685" r_length="685" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E317961" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106106" e_stop="105422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTT</genome_strand>
        <mrna_strand>TTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTACGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCACGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAAGCATCATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447925" ref_strand="+" ref_description="SGN-E447925 [cSTS-4-O21]">
      <seq>cctcctcagccaccaatcttggcttcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacacaggattcaaatcagaatgtttccccttgctcgctggtttatccaagtttctctttcgggcttttcctaaaccccatttctcaaattggggtaattaaatctgagaatgatggatgcgtcgtcgtagaagaagattcactgaagatatgggcggatagtgtgaagaaaaagaggaagaagaagatgaataagcacaagttgaagaagctaaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccagcgtaatgttaattgtttctgactgaaagatagtcctttttcccatgtccatcaccattttgggttgaaaatatagctcaatttcgattgctaaatcatgttttaggaataatgaaccttttttcatcccgagtagagatgtatgtttgagatatattggtcacgctttgtgaaagtgttgcagtctaacatagataagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106271" stop="105131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105972" g_stop="105431" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E447925" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105972" e_stop="105431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTCAACCACCAATCTTGGC-TCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCC-TCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTT-TTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGC</genome_strand>
        <mrna_strand>CCTCCTCAGCCACCAATCTTGGCTTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACACAGGATTCAAATCAGAATGTTTCCCCTTGCTCGCTGGTTTATCCAAGTTTCTCTTTCGGGCTTTTCCTAAACCCCATTTCTCAAATTGGGGTAATTAAATCTGAGAATGATGGATGCGTCGTCGTAGAAGAAGATTCACTGAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAAGAAGATGAATAAGCACAAGTTGAAGAAGCTAAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCAGCGTAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCATCACCATTTTGGGTTGAAAATATAGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTTCATCCCGAGTAGAGATGTATGTTTGAGATATATTGGTCACGCTTTGTGAAAGTGTTGCAGTCTAACATAGATAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448854" ref_strand="+" ref_description="SGN-E448854 [cSTS-4-L17]">
      <seq>tcggaaagctctgaagaaccaatttcaatctgccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacccctcctcagccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggattcaaatcagaatgtttccccttgctcgctggtttatccaagtttctctttcgggcttttcctaaaccccatttctcaaattggggtaattaaatctgagaatgatggatgcgtcgtcgtagaagaagattcactgaagatatgggcggatagtgtgaagaaaaagaggaagaagaagatgaataagcacaagttgaagaagctaaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccagcgtaatgttaattgtttctgactgaaagatagtcctttttcccatgtccatcaccattttgggttgaaaatatagctcaatttcgattgctaaatcatgttttaggaataatgaaccttttttcatcccgagtagagatgtatgtttgggatttattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106363" stop="105171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106063" g_stop="105471" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E448854" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106063" e_stop="105471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCC-TCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACC-TTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGG</genome_strand>
        <mrna_strand>TCGGAAAGCTCTGAAGAACCAATTTCAATCTGCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCCCTCCTCAGCCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATTCAAATCAGAATGTTTCCCCTTGCTCGCTGGTTTATCCAAGTTTCTCTTTCGGGCTTTTCCTAAACCCCATTTCTCAAATTGGGGTAATTAAATCTGAGAATGATGGATGCGTCGTCGTAGAAGAAGATTCACTGAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAAGAAGATGAATAAGCACAAGTTGAAGAAGCTAAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCAGCGTAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCATCACCATTTTGGGTTGAAAATATAGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTTCATCCCGAGTAGAGATGTATGTTTGGGATTTATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573346" ref_strand="+" ref_description="SGN-E573346 [32642]">
      <seq>gttcgatcctgcatgggggcatatatttatttttgaaacttttacgtcttcctttttggcaaaaccctagcggatgcaattctctgttatttttcctttctctttttggtggttcttgaattgttactccaaatggcttcaattcttcggaaaggtctgaagaaccaatttcaatctgccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacccctcctcagccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggattcaaatcagaatgtttccccttgctcgctggtttatccaagtttctctttcgggcttttcctaaaccccatttctcaaattggggtaattaaatctgagaaggatggaggcgtcgtcgtagaagaagattcactgaagatatgggcagatagtgtgaagaaaaagaggaagaagaagatgaacaaacacaagttgaagaagctaaggaagcgcttgaggaggaagactcaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaatatagtccttttcccatgtccatcaacattttggggtttgaaaatattgctccaatttcgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106513" stop="105242"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106213" g_stop="105540" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E573346" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106213" e_stop="105540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGATCCTGCATGTGGGCAAATATTTATTTTTGAAACTTCGAAGTCTTCCTTTTTGGCAAAACCCTAACGGATGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGAC-AAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCC-TCGCCATTTT-GAG-TTGAAAATATTGCT-CAATTTCGATTG</genome_strand>
        <mrna_strand>GTTCGATCCTGCATGGGGGCATATATTTATTTTTGAAACTTTTACGTCTTCCTTTTTGGCAAAACCCTAGCGGATGCAATTCTCTGTTATT-TTTC---CTTTCTCTTTTTGGTGGTTCTTGAATTGTTACTCCAAATGGCTTCAATTCTTCGGAAAGGTCTGAAGAACCAATTTCAATCTGCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCCCTCCTCAGCCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATTCAAATCAGAATGTTTCCCCTTGCTCGCTGGTTTATCCAAGTTTCTCTTTCGGGCTTTTCCTAAACCCCATTTCTCAAATTGGGGTAATTAAATCTGAGAAGGATGGAGGCGTCGTCGTAGAAGAAGATTCACTGAAGATATGGGCAGATAGTGTGAAGAAAAAGAGGAAGAAGAAGATGAACAAACACAAGTTGAAGAAGCTAAGGAAGCGCTTGAGGAGGAAGACTCAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAATATAGTCC-TTTTCCCATGTCCATCAACATTTTGGGGTTTGAAAATATTGCTCCAATTTCGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214663" ref_strand="+" ref_description="SGN-E214663 [cLEC-79-M6]">
      <seq>tattctttctttctttctctttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgannattgatgtccctttccggcataatgttaattgtttctgactgaaagatagtccttttttccatgtcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106426" stop="105278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106126" g_stop="105578" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E214663" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106126" e_stop="105578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCT</genome_strand>
        <mrna_strand>TATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGANNATTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTTCCATGTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324226" ref_strand="+" ref_description="SGN-E324226 [cTOC-4-G5]">
      <seq>gttattctttctttctttctctttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106428" stop="105409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106128" g_stop="105709" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E324226" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106128" e_stop="105709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATG</genome_strand>
        <mrna_strand>GTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E621866" ref_strand="+" ref_description="SGN-E621866 [72227]">
      <seq>ttttttaacacaatataaacccaggtttactacaaattgaattaattacaatgtatgaatacaaattattcatgcactggttaaaattctataagctataactgcgtaaaaaggatcagatgaagctgataacaacccaatcaactgcgttattttactcagaggtgatttattttcttgatcatcattacttggtaatttacgaatcacttctggctctgtaaatcccttaatacattgaaaatattgtaccacaagttgcactcttccgtaccctgntactggtccctccaggcactaattgctttatcatagaacaatctgttactgaaacttacaataaacactcctccaggtcttaaatcgaaatacttccggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="106471" stop="107455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106768" g_stop="107155" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E621866" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E621866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106768" e_stop="107155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGTTACACAATAATATACCCAGGTTTACTACAAATTGAATTTAATTACAATGTATGAATACAAATTTATTCATGCACTGGTTTAAAGTTTCTGTAAGCTATAACTGCGTAAAAAGGATCCGATGAAGCTGATAACAACCCAATCAACTGCATTATTTTACTGAGAGGTGATTTATTTTGTTGATCATCATTAGTTGGTAATTTACGAATCACTTGTGGCTCTGTAAATCCCTTAATACATTGAAAATATTGTACCACAAGTTGCACTCTCCCGTATCCTG-TACT-GTCCCTCCAGGCACTAATTGCTTTATCGTAGAACAATCTGTTACTGAAACTTACAATAAACACTCCTCCAGGTCTTAGAATTCGAAATACTTCCGCGAAAA</genome_strand>
        <mrna_strand>TTTTTTAACACAAT-ATAAACCCAGGTTTACTACAAATTGAA-TTAATTACAATGTATGAATACAAA-TTATTCATGCACTGG-TTAAA-ATTCTATAAGCTATAACTGCGTAAAAAGGATCAGATGAAGCTGATAACAACCCAATCAACTGCGTTATTTTACTCAGAGGTGATTTATTTTCTTGATCATCATTACTTGGTAATTTACGAATCACTTCTGGCTCTGTAAATCCCTTAATACATTGAAAATATTGTACCACAAGTTGCACTCTTCCGTACCCTGNTACTGGTCCCTCCAGGCACTAATTGCTTTATCATAGAACAATCTGTTACTGAAACTTACAATAAACACTCCTCCAGGTCTTA-AA-TCGAAATACTTCCG-GAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339914" ref_strand="+" ref_description="SGN-E339914 [cTOF-3-L15]">
      <seq>ccaagacatggaaatccccaaacttacacttgtttcctcttccatccaaaaccaaaacacagccctcaataataataactccaaaagcctataataatgaagataacaattcaacagcaggaaaaatcaaacgaatggtacttactcaacaaggaagaaccaaactaaacattttaccagacaaggaattttatgcctatccaagattcgtcacacacgtcgatgatcgtttcatttccaatttaaccgatctttacaggaaatgtttgaaacctgaatttgaaattcttgaccttatgagctcatgggtcagtcatttaccacaagaagtgaagtacaaaaaggtggttggtcatggacttaatgcccaagagctagcaaaaaatcccaaattggattatttctttgtgagggatttgaatgaagatgagaaatttgagtttgaaaattgtagttttgatgctgttttatgcactgtcagtgtgcagtatcttcaacagcctgagaaggttttcgcggaagtatttcgaattctaagacctggaggagtgtttattgtaagtttcagtaacagattgttctacgataaagcaattagtgcctggagggacagtacaggatacggggagagtgcaacttgtggtacaatattttcaatgtattaagggatttacagagccacaagtgattcgtaaattaccaactaatgatgatcaacanaataaatcacctctcagtaaaataatgcagttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="108228" stop="106611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107928" g_stop="107670" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107601" g_stop="107352" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="509" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107351" i_stop="107157" i_length="195">
            <donor d_prob="0.626" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107156" g_stop="106911" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="756" r_length="247" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E339914" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107928" e_stop="107670"/>
          <exon e_start="107601" e_stop="107352"/>
          <exon e_start="107156" e_stop="106911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAGTGATAAGGTTATATTATTAACTAAATTTTGCATTAAGAACACAATGTTTAGTTTCTATTTTGATCATTGTGTTACTAATACAATGTTATTAAATTTCAGGTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATAC-GGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAAATAATGCAGTTGATT</genome_strand>
        <mrna_strand>CCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG....................................................................GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG...................................................................................................................................................................................................GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACANAATAAATCACCTCTCAGTAAAATAATGCAGTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341643" ref_strand="+" ref_description="SGN-E341643 [cTOE-23-H15]">
      <seq>atgatcgtttcatttccaatttaaccgatctttacaggaaatgtttgaaacctgaatttgaaattcttgaccttatgagctcatgggtcagtcatttaccacaagaagtgaagtacaaaaaggtggttggtcatggacttaatgcccaagagctagcaaaaaatcccaaattggattatttctttgtgagggatttgaatgaagatgagaaatttgagtttgaaaattgtagttttgatgctgttttatgcactgtcagtgtgcagtatcttcaacagcctgagaaggtaacttaattagatgataaagagaatcaagtgtcaccacaaccacataaacattgttgcaaaaatgtgtggttggttataagccaaacaatataatgataaggttttcgcggaagtatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="108006" stop="106840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107706" g_stop="107670" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68">
            <donor d_prob="0.940" d_score="0.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107601" g_stop="107249" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="390" r_length="353" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107248" i_stop="107157" i_length="92">
            <donor d_prob="0.506" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107156" g_stop="107140" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="407" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E341643" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107706" e_stop="107670"/>
          <exon e_start="107601" e_stop="107249"/>
          <exon e_start="107156" e_stop="107140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAGTGATAAGGTTATATTATTAACTAAATTTTGCATTAAGAACACAATGTTTAGTTTCTATTTTGATCATTGTGTTACTAATACAATGTTATTAAATTTCAGGTTTTCGCGGAAGTATT</genome_strand>
        <mrna_strand>ATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG....................................................................GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAATGATAAG............................................................................................GTTTTCGCGGAAGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211724" ref_strand="+" ref_description="SGN-E211724 [cLEC-66-G23]">
      <seq>ttgattctctttatcatctaattaagttaccttctcaggctgttgaagatactgcacactgacagtgcataaaacagcatcaaaactacaattttcaaactcaaatttctcatcttcattcaaatccctcacaaagaaataatccaatttgggattttttgctagctcttgggcattaagtccatgaccaaccacctttttgtacttcacttcttgtggtaaatgactgacccatgagctcataaggtcaagaatttcaaattcaggtttcaaacatttcctataaaaacagcgcaggggagtcaaattaatcaataacatatttgaacttaattttgacaccgttacctgtaaagatcggttaaattggaaatgaaacgatcatcgacgtgtgtgacgaatcttggataggcataaaattccttgtctggtaaaatgtttagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="107022" stop="108068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107322" g_stop="107768" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E211724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107322" e_stop="107768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTG</genome_strand>
        <mrna_strand>TTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206647" ref_strand="+" ref_description="SGN-E206647 [cLEC-31-B12]">
      <seq>ttgattctctttatcatctaattaagttaccttctcaggctgttgaagatactgcacactgacagtgcataaaacagcatcaaaactacaattttcaaactcaaatttctcatcttcattcaaatccctcacaaagaaataatccaatttgggattttttgctagctcttgggcattaagtccatgaccaaccacctttttgtacttcacttcttgtggtaaatgactgacccatgagctcataaggtcaagaatttcaaattcaggtttcaaacatttcctataaaaacagcgcaggggagtcaaattaatcaataacatatttgaacttaattttgacaccgttacctgtaaagatcggttaaattggaaatgaaacgatcatcgacgtgtgtgacgaatcttggataggcataaaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="+" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="107022" stop="108043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107322" g_stop="107743" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="+" ref_id="SGN-E206647" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107322" e_stop="107743"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTC</genome_strand>
        <mrna_strand>TTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346102" ref_strand="+" ref_description="SGN-E346102 [cTOF-34-E1]">
      <seq>ccatcccaagacatggaaatccccaaacttacacttgtttcctcttccatccaaaaccaaaacacagccctcaataataataactccaaaagcctataataatgaagataacaattcaacagcaggaaaaatcaaacgaatggtacttactcaacaaggaagaaccaaactaaacattttaccagacaaggaattttatgcctatccaagattcgtcacacacgtcgatgatcgtttcatttccaatttaaccgatctttacaggtaacggtgtcaaaattaagttcaaatatgttattgattaatttgactcccctgcgctgtttttataggaaatgtttgaaacctgaatttgaaattcttgaccttatgagctcatgggtcagtcatttaccacaagaagtgaagtacaaaaaggtggttggtcatggacttaatgcccaagagctagcaaaaaatcccaaattggattatttctttgtgagggatttgaatgaagatgagaaatttgagtttgaaattgtagttttgatgctgttttatgcactgtcagtgtgcagtatcttcaacagcctgagaagggtacttattagatgataaagagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0072B02-y76xp/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0072B02.3" temp_strand="-" temp_description="C02HBa0072B02.3  AC215376.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0072B02 sequenced_by:kribb upload_account_name:korea">
        <position start="108233" stop="107026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107933" g_stop="107326" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0072B02.3" gen_strand="-" ref_id="SGN-E346102" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0072B02.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107933" e_stop="107326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAA</genome_strand>
        <mrna_strand>CCATCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTG-AAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGGTACTT-ATTAGATGATAAAGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>264</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1403" PGL_stop="2857"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1403" e_stop="1609"/>
            <exon e_start="1957" e_stop="2014"/>
            <exon e_start="2204" e_stop="2343"/>
            <exon e_start="2588" e_stop="2857"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.914" e_score="0.966"/>
          <exon-intron don_prob="0.976" acc_prob="0.993" e_score="0.983"/>
          <exon-intron don_prob="0.999" acc_prob="0.978" e_score="0.964"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="1403" e_stop="1609" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.914">
            <gDNA_intron_boundary i_start="1610" i_stop="1956" i_length="347"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="1957" e_stop="2014" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2015" i_stop="2203" i_length="189"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="2204" e_stop="2343" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.978">
            <gDNA_intron_boundary i_start="2344" i_stop="2587" i_length="244"/>
          </intron>
          <exon e_serial="4" e_score="0.970">
            <gDNA_exon_boundary e_start="2588" e_stop="2857" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1403" stop="1609"/>
              <exon start="1957" stop="2014"/>
              <exon start="2204" stop="2343"/>
              <exon start="2588" stop="2857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1403" stop="1609"/>
              <exon start="1957" stop="2014"/>
              <exon start="2204" stop="2343"/>
              <exon start="2588" stop="2829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459260" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG : GTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAG : GTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAG : TTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGAT</gDNA_template>
            <first_frame> A  L  S  M  F  G  P  A  T  Y  L  I  C  S  C  T  F  L  P  H  F  S  T  S  S  S  S  H  K  F  H  L  C  L  N  N  L  L  L  M  C  K  W  S  G  G  C  A  D  I  S  L  P  V  V  V  L  R  *  C  I  F  T  C  I  H  Q  E  T  :  V  A  N  T  G  T  *  L  F  S  S  F  H  C  L  P  V  I  Q   : G  S  Q  D  R  E  I  Q  S  I  V  *  Y  D  T  C  L  F  D  P  N  V  L  R  S  S  S  I  G  S  S  F  A  G  H  F  S  C  C  V  L  P  Q  F  P  V  Q  :  F  F  D  G  F  I  S  Q  P  Y  P  D  *  G  V  H  R  I  W  E  Q  T  S  E  W  I  E  A  V  H  T  R  A  *  W  *  N  Q  H  A  C  S  S  E  G  E  *  F  Q  *  S  G  L  S  K  K  L  W  *  H  P  I  R  D  L  Q  S  S  A  W  L  A  C  I  T  L  A  C  N  A  D  V  C  P  F  I  Y  C  V  D </first_frame>
            <second_frame>  P  F  L  C  L  A  L  L  P  I  L  F  A  L  V  L  S  C  L  I  S  L  P  L  P  P  A  I  S  F  I  S  V  S  T  I  C  Y  L  C  A  N  G  V  V  A  V  L  I  S  A  S  Q  L  L  F  Y  V  S  A  S  L  H  V  F  I  K  K  R :   S  Q  T  R  E  H  N  F  S  P  L  F  T  A  F  L  S  S  K  :  V  V  R  I  V  R  F  N  P  L  F  D  M  T  L  V  S  L  T  L  M  C  F  A  H  P  A  L  G  L  L  L  L  V  I  S  H  A  V  C  S  H  N  S  L  S  S :   F  L  M  A  S  F  H  S  R  T  Q  T  K  E  F  I  E  S  G  N  R  R  Q  S  G  S  K  Q  S  I  P  E  H  D  G  E  I  N  T  H  V  P  Q  K  E  S  N  S  S  S  L  D  S  V  K  S  Y  G  D  T  Q  L  E  I  F  N  H  R  H  G  L  L  V  L  H  L  L  A  M  L  M  F  V  P  S  F  I  A  W   </second_frame>
            <third_frame>   P  F  Y  V  W  P  C  Y  L  S  Y  L  L  L  Y  F  P  A  S  F  L  Y  L  F  L  Q  P  *  V  S  S  L  S  Q  Q  S  V  T  Y  V  Q  M  E  W  W  L  C  *  Y  Q  P  P  S  C  C  S  T  L  V  H  L  Y  M  Y  S  S  R  N   : G  R  K  H  G  N  I  T  F  L  L  F  S  L  P  S  C  H  P  R :   *  S  G  S  *  D  S  I  H  C  L  I  *  H  L  S  L  *  P  *  C  A  S  L  I  Q  H  W  V  F  F  C  W  S  F  L  M  L  C  A  P  T  I  P  C  P   : V  F  *  W  L  H  F  T  A  V  P  R  L  R  S  S  *  N  L  G  T  D  V  R  V  D  R  S  S  P  Y  P  S  M  M  V  K  S  T  R  M  F  L  R  R  R  V  I  P  V  V  W  T  Q  *  K  A  M  V  T  P  N  *  R  S  S  I  I  G  M  A  C  L  Y  Y  T  C  L  Q  C  *  C  L  S  L  H  L  L  R  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1404" stop="1609"/>
                    <exon start="1957" stop="2014"/>
                    <exon start="2204" stop="2343"/>
                    <exon start="2588" stop="2855"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFLCLALLPILFALVLSCLISLPLPPAISFISVSTICYLCANGVVAVLISASQLLFYVSASLHVFIKKRSQTREHNFSPLFTAFLSSKVVRIVRFNPLFDMTLVSLTLMCFAHPALGLLLLVISHAVCSHNSLSSFLMASFHSRTQTKEFIESGNRRQSGSKQSIPEHDGEINTHVPQKESNSSSLDSVKSYGDTQLEIFNHRHGLLVLHLLAMLMFVPSFIAW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3235" PGL_stop="3618"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3235" e_stop="3618"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="3235" e_stop="3618" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3235" stop="3618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3235" stop="3618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3235" stop="3618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</gDNA_template>
            <first_frame> A  I  F  L  L  D  T  F  P  I  F  V  A  *  P  W  L  L  T  *  H  F  I  P  W  P  P  L  G  L  Y  H  V  L  L  G  S  *  R  R  E  V  G  K  R  G  K  C  T  I  T  V  G  N  T  L  I  N  T  K  V  K  I  L  P  L  Y  D  S  A  T  F  R  M  V  L  Q  *  M  F  *  L  T  C  L  N  L  F  D  V  *  F  S  F  S  E  E  *  N  I  S  L  C  M  A  L  I  L  Q  V  I  Q  S  L  Y  L  S  Q  K  F  V  Y  G  L  S  T  *  T </first_frame>
            <second_frame>  L  S  S  C  W  I  L  F  L  Y  L  W  L  S  L  G  S  L  H  N  I  L  S  H  G  R  H  W  V  Y  I  M  C  F  *  D  H  R  E  E  K  *  G  K  G  G  N  V  P  S  P  *  E  T  L  S  *  T  L  K  *  K  Y  S  H  Y  T  I  V  P  H  S  E  W  F  C  N  R  C  S  S  *  H  A  S  I  C  L  M  C  N  F  H  F  Q  R  S  R  I  S  A  C  V  W  L  *  F  Y  K  *  F  N  H  Y  I  C  R  K  N  L  F  M  V  F  Q  L  K   </second_frame>
            <third_frame>   Y  L  L  A  G  Y  F  S  Y  I  C  G  L  A  L  A  P  Y  I  T  F  Y  P  M  A  A  I  G  F  I  S  C  A  F  R  I  I  E  K  R  S  R  E  K  G  E  M  Y  H  H  R  R  K  H  S  H  K  H  *  S  E  N  T  P  T  I  R  *  C  H  I  Q  N  G  S  A  I  D  V  L  V  D  M  P  Q  F  V  *  C  V  I  F  I  F  R  G  V  E  Y  Q  L  V  Y  G  F  N  S  T  S  D  S  I  I  I  F  V  A  K  I  C  L  W  S  F  N  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="4055" PGL_stop="5648"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4055" e_stop="4240"/>
            <exon e_start="4405" e_stop="4487"/>
            <exon e_start="4559" e_stop="4788"/>
            <exon e_start="4909" e_stop="4958"/>
            <exon e_start="5063" e_stop="5137"/>
            <exon e_start="5447" e_stop="5648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.997" e_score="0.984"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="4055" e_stop="4240" e_length="186"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.997">
            <gDNA_intron_boundary i_start="4241" i_stop="4404" i_length="164"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4405" e_stop="4487" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4488" i_stop="4558" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4559" e_stop="4788" e_length="230"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.999">
            <gDNA_intron_boundary i_start="4789" i_stop="4908" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4909" e_stop="4958" e_length="50"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4959" i_stop="5062" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5063" e_stop="5137" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.961">
            <gDNA_intron_boundary i_start="5138" i_stop="5446" i_length="309"/>
          </intron>
          <exon e_serial="6" e_score="0.980">
            <gDNA_exon_boundary e_start="5447" e_stop="5648" e_length="202"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4055" stop="4240"/>
              <exon start="4405" stop="4487"/>
              <exon start="4559" stop="4788"/>
              <exon start="4909" stop="4958"/>
              <exon start="5063" stop="5137"/>
              <exon start="5447" stop="5648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730854" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG : GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG : AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT : ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG : TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG : CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACGTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</gDNA_template>
            <first_frame> W  R  *  *  S  R  R  V  A  E  P  Q  V  P  V  G  G  S  Y  G  W  L  G  *  R  G  S  S  H  G  Q  S  C  C  R  R  H  T  *  S  P  F  *  A  K  E  T  F  *  F  A  A  F  Q  D  S  P  N  K  F  *  K  :  E  K  K  G  S  E  K  E  P  C  V  H  N  C  N  C  S  *  S  G  R  P  R  H  C  K  A  R :   K  R  E  K  G  G  R  I  E  I  R  R  E  R  R  *  G  I  G  R  T  G  L  F  C  C  Y  I  F  Y  *  E  D  R  T  K  I  H  *  E  S  R  H  E  R  S  *  S  I  R  G  T  G  V  F  C  F  F  F  F  C  S  I  S  L  H  *  S  T  S  *  R  A  F  L  C   : Y  L  F  G  D  L  F  *  T  E  Y  H  S  L  W  S  Q  :  F  L  *  E  V  F  A  I  C  C  *  *  M  W  K  E  M  S  Q  V  Q  A  A  Y  Q  :  Q  W  *  I  M  H  C  K  Y  S  T  L  E  Y  N  S  T  V  V  S  Q  R  S  R  N  K  K  S  S  C  *  F  E  *  *  R  S  *  T  S  K  S  S  K  S  C  C  Y  S  F  *  Q  Q  N  D  K  S  P  A  T  *  Q  S  R  I  W  S  </first_frame>
            <second_frame>  G  D  D  K  V  E  G  L  L  S  P  K  F  R  S  V  A  A  M  A  G  W  D  E  E  A  L  L  M  A  S  L  V  V  E  D  T  P  D  R  L  S  K  Q  K  K  R  S  D  L  L  H  F  K  T  P  P  T  N  S  R  R :   K  R  R  A  Q  K  R  S  P  A  S  I  T  A  T  V  L  D  L  E  D  Q  D  T  A  K  Q   : E  S  E  K  K  E  A  E  L  K  L  D  E  K  G  D  E  A  L  E  E  Q  G  C  S  V  A  T  S  S  T  K  K  I  E  P  K  S  I  E  K  A  D  T  K  E  A  E  A  S  E  E  Q  G  C  S  V  S  S  S  S  A  A  F  P  S  I  D  L  L  R  E  E  L  S  C  A  :  I  C  L  E  I  C  F  E  P  S  T  T  P  C  G  H  S :   F  C  K  K  C  L  R  S  A  A  D  K  C  G  K  K  C  P  K  C  R  Q  L  I  S :   N  G  R  S  C  T  V  N  T  V  L  W  N  T  I  Q  L  L  F  P  K  E  V  E  T  R  K  A  A  A  D  L  S  S  R  E  A  K  R  Q  S  P  V  R  A  V  A  T  H  S  N  S  R  T  T  R  V  L  L  L  N  S  P  E  S  G  P </second_frame>
            <third_frame>   E  M  I  K  S  K  G  C  *  A  P  S  S  G  R  W  Q  L  W  L  V  G  M  K  R  L  F  S  W  P  V  L  L  S  K  T  H  L  I  A  F  L  S  K  R  N  V  L  I  C  C  I  S  R  L  P  Q  Q  I  L  E   : G  K  E  G  L  R  K  G  A  L  R  P  *  L  Q  L  F  L  I  W  K  T  K  T  L  Q  S  K  :  K  A  R  K  R  R  Q  N  *  N  *  T  R  K  E  M  R  H  W  K  N  R  V  V  L  L  L  H  L  L  L  R  R  *  N  Q  N  P  L  R  K  Q  T  R  K  K  L  K  H  Q  R  N  R  G  V  L  F  L  L  L  L  Q  H  F  P  P  L  I  Y  F  V  K  S  F  L  V  L :   F  V  W  R  S  V  L  N  R  V  P  L  L  V  V  T   : V  F  V  R  S  V  C  D  L  L  L  I  N  V  E  R  N  V  P  S  A  G  S  L  S   : A  M  V  D  H  A  L  *  I  Q  Y  F  G  I  Q  F  N  C  C  F  P  K  K  *  K  Q  E  K  Q  L  L  I  *  V  V  E  K  L  N  V  K  V  Q  *  E  L  L  L  L  I  L  T  A  E  R  Q  E  S  C  Y  L  T  V  Q  N  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4056" stop="4240"/>
                    <exon start="4405" stop="4487"/>
                    <exon start="4559" stop="4788"/>
                    <exon start="4909" stop="4958"/>
                    <exon start="5063" stop="5137"/>
                    <exon start="5447" stop="5648"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDDKVEGLLSPKFRSVAAMAGWDEEALLMASLVVEDTPDRLSKQKKRSDLLHFKTPPTNSRRKRRAQKRSPASITATVLDLEDQDTAKQESEKKEAELKLDEKGDEALEEQGCSVATSSTKKIEPKSIEKADTKEAEASEEQGCSVSSSSAAFPSIDLLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVETRKAAADLSSREAKRQSPVRAVATHSNSRTTRVLLLNSPESGP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="6488" PGL_stop="7006"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6488" e_stop="7006"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="6488" e_stop="7006" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6488" stop="7006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420335" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATACATTGAACATTCAACTTCCATTTTCATATTACCTTTGTGTTGTGACGTAAATTGATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAAACTGATATGAAATAATTTCATGTTGCGGCGTCATGTCAGTGATTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTCTGCTACTCGATCTTTTAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACGGCTCGTGTCCCTAAACCAGGGGCACGATCCCTGGACCCAACATTTCTCTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACAAGCACATTTCTATCCATATTGGCATATCTAAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAATGCT</gDNA_template>
            <first_frame> R  Y  I  E  H  S  T  S  I  F  I  L  P  L  C  C  D  V  N  *  C  T  K  R  I  Y  G  L  F  H  V  Q  I  K  *  Q  K  K  L  D  P  Q  S  Q  K  L  I  *  N  N  F  M  L  R  R  H  V  S  D  F  C  Q  G  N  L  P  V  F  G  S  V  N  I  S  A  T  R  S  F  R  P  V  S  V  T  S  Q  N  R  L  D  Q  S  G  G  S  T  A  R  V  P  K  P  G  A  R  S  L  D  P  T  F  L  C  C  C  Q  S  E  T  *  V  A  T  L  L  *  N  F  S  L  K  T  S  Q  T  *  Y  L  *  W  L  I  T  S  T  F  L  S  I  L  A  Y  L  N  S  D  F  K  *  K  W  *  T  T  L  I  N  V  E  F  N  A </first_frame>
            <second_frame>  D  T  L  N  I  Q  L  P  F  S  Y  Y  L  C  V  V  T  *  I  D  V  Q  K  E  Y  M  D  Y  F  M  Y  K  *  N  S  K  R  N  *  I  L  K  V  K  N  *  Y  E  I  I  S  C  C  G  V  M  S  V  I  F  A  R  V  T  C  Q  C  L  G  R  *  T  S  L  L  L  D  L  L  G  Q  C  Q  *  L  H  K  I  D  *  T  N  L  V  V  Q  R  L  V  S  L  N  Q  G  H  D  P  W  T  Q  H  F  S  V  V  A  N  Q  K  H  K  *  P  P  S  C  R  T  S  P  *  R  H  P  K  L  D  T  C  N  G  *  S  Q  A  H  F  Y  P  Y  W  H  I  *  T  Q  T  L  N  E  N  G  E  P  H  *  L  M  L  N  S  M   </second_frame>
            <third_frame>   I  H  *  T  F  N  F  H  F  H  I  T  F  V  L  *  R  K  L  M  Y  K  K  N  I  W  T  I  S  C  T  N  K  I  A  K  E  I  R  S  S  K  S  K  T  D  M  K  *  F  H  V  A  A  S  C  Q  *  F  L  P  G  *  L  A  S  V  W  V  G  E  H  L  C  Y  S  I  F  *  A  S  V  S  N  F  T  K  S  T  R  P  I  W  W  F  N  G  S  C  P  *  T  R  G  T  I  P  G  P  N  I  S  L  L  L  P  I  R  N  I  S  S  H  P  P  V  E  L  L  L  E  D  I  P  N  L  I  L  V  M  V  N  H  K  H  I  S  I  H  I  G  I  S  K  L  R  L  *  M  K  M  V  N  H  I  D  *  C  *  I  Q  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6632" stop="6850"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNFMLRRHVSDFCQGNLPVFGSVNISATRSFRPVSVTSQNRLDQSGGSTARVPKPGARSLDPTFLCCCQSET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="7462" PGL_stop="6880"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7462" e_stop="6880"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="7462" e_stop="6880" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7462" stop="6880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTCATTTATGATAATAACAGCTTGGACGATATTGATGATGTCATTAAGCTATTATCGAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTGTGTGAATGGGTTGGTTTTATGGATGTGGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAAGGAGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCATGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCATAAGAGTATTGTGAAACCTGAAGCATTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCCAATATGGATAGAAATGTGCTTGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</gDNA_template>
            <first_frame> H  N  V  K  K  P  G  Q  L  L  E  R  V  D  H  V  P  Y  *  N  R  S  T  A  L  V  H  L  *  *  *  Q  L  G  R  Y  *  *  C  H  *  A  I  I  E  H  K  C  D  T  T  C  L  A  L  D  Q  D  S  R  G  R  F  C  S  L  C  I  T  S  *  R  C  V  *  M  G  W  F  Y  G  C  G  *  V  L  P  L  A  Y  W  Y  V  T  A  *  H  I  K  K  P  I  K  E  *  *  *  S  C  *  V  A  G  V  M  S  *  F  W  T  I  W  S  Q  T  C  P  D  T  R  G  H  H  G  V  Q  L  Q  D  D  C  T  *  E  A  *  E  Y  C  E  T  *  S  I  E  F  N  I  N  Q  C  G  S  P  F  S  F  K  V  *  V  *  I  C  Q  Y  G  *  K  C  A  C  D  *  P  L  Q  V  S  S  L  G  C  L  </first_frame>
            <second_frame>  T  M  L  R  N  Q  A  S  F  L  K  E  W  I  M  Y  H  T  R  I  G  V  Q  R  W  F  I  Y  D  N  N  S  L  D  D  I  D  D  V  I  K  L  L  S  N  I  N  V  T  R  H  V  W  P  W  I  K  T  Q  E  A  G  F  A  H  C  A  L  R  A  R  D  V  C  E  W  V  G  F  M  D  V  D  E  F  F  H  L  P  T  G  M  S  L  L  D  I  L  R  N  Q  S  R  S  N  S  K  V  A  E  L  R  V  S  C  H  N  F  G  P  S  G  L  K  H  V  P  T  Q  G  V  T  M  G  Y  N  C  R  M  I  A  P  E  R  H  K  S  I  V  K  P  E  A  L  N  S  T  L  I  N  V  V  H  H  F  H  L  K  S  E  F  R  Y  A  N  M  D  R  N  V  L  V  I  N  H  Y  K  Y  Q  V  W  D  V  F </second_frame>
            <third_frame>   Q  C  *  E  T  R  P  A  S  *  K  S  G  S  C  T  I  L  E  S  E  Y  S  V  G  S  F  M  I  I  T  A  W  T  I  L  M  M  S  L  S  Y  Y  R  T  *  M  *  H  D  M  F  G  L  G  S  R  L  K  R  Q  V  L  L  I  V  H  Y  E  L  E  M  C  V  N  G  L  V  L  W  M  W  M  S  S  S  T  C  L  L  V  C  H  C  L  T  Y  *  E  T  N  Q  G  V  I  V  K  L  L  S  C  G  C  H  V  I  I  L  D  H  L  V  S  N  M  S  R  H  K  G  S  P  W  G  T  I  A  G  *  L  H  L  R  G  I  R  V  L  *  N  L  K  H  *  I  Q  H  *  S  M  W  F  T  I  F  I  *  S  L  S  L  D  M  P  I  W  I  E  M  C  L  *  L  T  I  T  S  I  K  F  G  M  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7461" stop="6880"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMLRNQASFLKEWIMYHTRIGVQRWFIYDNNSLDDIDDVIKLLSNINVTRHVWPWIKTQEAGFAHCALRARDVCEWVGFMDVDEFFHLPTGMSLLDILRNQSRSNSKVAELRVSCHNFGPSGLKHVPTQGVTMGYNCRMIAPERHKSIVKPEALNSTLINVVHHFHLKSEFRYANMDRNVLVINHYKYQVWDVF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="8325" PGL_stop="7511"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8325" e_stop="8266"/>
            <exon e_start="8141" e_stop="7511"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8325" e_stop="8266" e_length="60"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="8265" i_stop="8142" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="8141" e_stop="7511" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8325" stop="8266"/>
              <exon start="8141" stop="7511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710437" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG : GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCG</gDNA_template>
            <first_frame> L  S  S  G  V  S  S  A  L  L  P  S  L  S  L  L  Y  Y  F  K  :  G  F  I  N  G  G  R  R  Q  P  Q  P  *  P  L  L  S  Q  L  Y  K  P  S  N  S  R  T  R  Q  L  F  S  *  N  T  L  L  Q  L  P  Y  S  Q  N  M  T  Y  T  A  S  T  L  I  L  T  L  L  N  L  L  N  Q  L  K  T  M  N  Y  W  P  N  S  S  F  D  V  P  W  L  S  H  V  E  S  *  R  H  F  S  S  S  L  P  V  T  P  S  P  L  D  H  H  V  G  G  I  R  W  P  M  R  P  *  S  I  A  I  T  R  P  *  C  L  L  K  G  L  I  F  V  V  E  D  N  R  T  L  Q  N  S  S  V  F  M  V  G  M  L  R  I  P  N  L  C  Y  N  Q  M  L  Y  P  L  L  K  K  L  F  D  V  I  P  Q  *  A  Y  *  I  I  Q  R  G  L  L  V  L  V  T  C  P  L  R  F  L  L  E  W  L  V  R  N  L  *  T  L  *  R  V  L  N  A  </first_frame>
            <second_frame>  F  L  L  V  Y  P  L  L  C  C  L  H  F  L  F  S  T  I  S  R :   V  S  S  M  A  A  G  D  N  H  S  P  N  R  C  *  A  N  Y  T  N  R  R  I  P  G  R  D  S  C  F  P  K  I  P  S  F  N  S  L  I  H  K  T  *  P  I  L  P  L  P  *  S  *  L  F  S  T  S  *  I  S  *  K  R  *  I  I  G  P  T  A  R  S  M  S  P  G  *  A  T  W  S  P  D  V  T  F  R  Q  V  Y  R  L  H  P  L  H  W  T  I  T  S  V  E  F  V  G  L  *  G  H  D  R  S  R  *  H  D  H  S  V  C  *  R  V  *  S  S  W  W  K  T  I  A  R  F  K  I  Q  V  C  L  W  L  G  C  *  E  S  Q  T  C  V  T  I  R  C  C  I  H  C  S  R  S  C  S  M  *  Y  P  S  E  H  T  E  *  S  R  E  V  Y  W  Y  *  *  H  A  H  *  G  F  C  *  N  G  W  *  G  T  F  R  L  Y  S  E  S  *  T  P </second_frame>
            <third_frame>   F  F  W  C  I  L  C  F  A  A  F  T  F  S  S  L  L  F  Q   : G  F  H  Q  W  R  P  A  T  T  T  A  L  T  A  V  K  P  I  I  Q  T  V  E  F  P  D  E  T  V  V  F  L  K  Y  P  P  S  T  P  L  F  T  K  H  D  L  Y  C  L  Y  L  D  P  N  S  S  Q  P  P  E  S  V  E  N  D  E  L  L  A  Q  Q  L  V  R  C  P  L  V  K  P  R  G  V  L  T  S  L  F  V  K  S  T  G  Y  T  L  S  I  G  P  S  R  R  W  N  S  L  A  Y  E  A  M  I  D  R  D  N  T  T  I  V  F  V  K  G  F  N  L  R  G  G  R  Q  S  H  A  S  K  F  K  C  V  Y  G  W  D  V  K  N  P  K  L  V  L  Q  S  D  V  V  S  I  A  Q  E  V  V  R  C  N  T  P  V  S  I  L  N  N  P  E  R  F  I  G  T  S  N  M  P  I  K  V  S  V  R  M  V  G  K  E  P  L  D  S  I  A  S  P  K  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8323" stop="8266"/>
                    <exon start="8141" stop="7513"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFWCILCFAAFTFSSLLFQGFHQWRPATTTALTAVKPIIQTVEFPDETVVFLKYPPSTPLFTKHDLYCLYLDPNSSQPPESVENDELLAQQLVRCPLVKPRGVLTSLFVKSTGYTLSIGPSRRWNSLAYEAMIDRDNTTIVFVKGFNLRGGRQSHASKFKCVYGWDVKNPKLVLQSDVVSIAQEVVRCNTPVSILNNPERFIGTSNMPIKVSVRMVGKEPLDSIASPKR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="19313" PGL_stop="21816"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19345" e_stop="19425"/>
            <exon e_start="20843" e_stop="20950"/>
            <exon e_start="21111" e_stop="21175"/>
            <exon e_start="21262" e_stop="21732"/>
            <exon e_start="21796" e_stop="21816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.667" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="0.857"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19345" e_stop="19425" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.971">
            <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20843" e_stop="20950" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21111" e_stop="21175" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.667">
            <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21262" e_stop="21732" e_length="471"/>
          </exon>
          <intron i_serial="4" don_prob="0.951" acc_prob="0.962">
            <gDNA_intron_boundary i_start="21733" i_stop="21795" i_length="63"/>
          </intron>
          <exon e_serial="5" e_score="0.857">
            <gDNA_exon_boundary e_start="21796" e_stop="21816" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19345" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21732"/>
              <exon start="21796" stop="21802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19345" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19347" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21732"/>
              <exon start="21796" stop="21816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19348" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19360" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19367" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19367" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20853" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21732"/>
              <exon start="21796" stop="21802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20859" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418848" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21122" stop="21175"/>
              <exon start="21262" stop="21732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344223" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT : GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG : GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG : GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA : AAAAAAGAGGAATCATGATAG</gDNA_template>
            <first_frame> I  R  R  G  V  R  S  I  Y  T  T  V  D  S  P  R  L  T  R  F  A  L  Q  P  P  K  F  :  V  E  V  E  F  E  N  G  S  L  Y  K  L  S  A  E  Y  L  R  I  Y  S  P  A  V  D  S  K  I  R  S  I  C  G  E  K  :  V  I  S  G  R  R  H  V  G  I  M  S  A  E  P  I  G  N  Y  G  V  R :   L  L  F  D  D  L  H  K  T  G  I  F  T  W  D  Y  F  Y  H  L  G  S  N  K  F  A  L  M  R  N  Y  I  R  T  L  K  K  H  G  L  S  R  D  P  P  R  R  R  *  P  *  D  V  P  M  R  R  L  I  H  T  I  *  A  G  N  I  L  L  I  Y  A  Q  S  E  I  V  T  *  N  C  T  V  A  N  I  L  K  T  S  S  *  Y  V  I  I  C  S  G  I  F  V  V  C  Y  F  L  D  L  E  I  D  M  *  Y  K  R  G  H  *  F  L  R  N  I  K  E  P  L  R  L  *  F  R  F  G  K  H  V  G  V  A  E  Q  H  A  *  L  N  E  R  N  S  K  R  *  K :   K  K  R  N  H  D   </first_frame>
            <second_frame>  S  G  E  V  F  E  A  Y  T  P  Q  *  I  L  H  A  S  P  D  L  L  F  N  L  L  N  L :   W  R  W  S  L  K  T  V  V  C  I  S  C  Q  L  S  I  *  E  Y  T  A  P  L  L  I  V  R  S  D  R  F  A  V  R  R :   S  Y  L  V  G  V  M  S  E  L  C  L  Q  N  L  L  E  I  M  E  *   : G  Y  Y  L  M  T  C  I  R  L  E  S  L  H  G  T  T  S  T  I  L  E  V  T  N  L  P  S  *  E  I  T  S  E  L  *  R  N  M  D  *  A  A  I  H  L  D  E  D  D  L  K  T  C  P  *  E  G  *  S  T  L  F  K  L  E  T  S  S  L  Y  M  L  R  V  K  L  *  H  K  T  V  L  L  Q  I  F  *  R  L  A  L  D  M  L  S  Y  V  Q  G  Y  L  W  C  A  I  F  *  I  *  R  L  T  C  D  T  K  E  V  I  S  F  *  G  T  L  R  N  L  F  V  C  N  L  D  L  G  S  M  L  V  L  Q  N  N  M  L  D  *  M  K  G  T  V  N  V  E   : K  K  R  G  I  M  I  </second_frame>
            <third_frame>   Q  E  R  C  S  K  H  I  H  H  S  R  F  S  T  P  H  Q  I  C  S  S  T  S  *  I   : C  G  G  G  V  *  K  R  *  S  V  *  V  V  S  *  V  F  E  N  I  Q  P  R  C  *  *  *  D  Q  I  D  L  R  *  E   : G  H  I  W  *  A  S  C  R  N  Y  V  C  R  T  Y  W  K  L  W  S  E  :  V  I  I  *  *  L  A  *  D  W  N  L  Y  M  G  L  L  L  P  S  W  K  *  Q  I  C  P  H  E  K  L  H  Q  N  S  E  E  T  W  T  K  P  R  S  T  *  T  K  M  T  L  R  R  A  H  E  K  A  D  P  H  Y  L  S  W  K  H  P  P  Y  I  C  S  E  *  N  C  D  I  K  L  Y  C  C  K  Y  S  K  D  *  L  L  I  C  Y  H  M  F  R  D  I  C  G  V  L  F  S  R  S  R  D  *  H  V  I  Q  K  R  S  L  V  S  K  E  H  *  G  T  S  S  F  V  I  *  I  W  E  A  C  W  C  C  R  T  T  C  L  I  E  *  K  E  Q  *  T  L  K  :  K  K  E  E  S  *  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19345" stop="19425"/>
                    <exon start="20843" stop="20950"/>
                    <exon start="21111" stop="21175"/>
                    <exon start="21262" stop="21409"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIRSICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFALMRNYIRTLKKHGLSRDPPRRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19313" e_stop="19425"/>
            <exon e_start="20843" e_stop="20950"/>
            <exon e_start="21111" e_stop="21175"/>
            <exon e_start="21262" e_stop="21736"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.971" e_score="0.982"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.667" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="19313" e_stop="19425" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.971">
            <gDNA_intron_boundary i_start="19426" i_stop="20842" i_length="1417"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20843" e_stop="20950" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="20951" i_stop="21110" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21111" e_stop="21175" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.667">
            <gDNA_intron_boundary i_start="21176" i_stop="21261" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21262" e_stop="21736" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19313" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19345" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19348" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19360" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19367" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19367" stop="19425"/>
              <exon start="20843" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20859" stop="20950"/>
              <exon start="21111" stop="21175"/>
              <exon start="21262" stop="21719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418848" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21122" stop="21175"/>
              <exon start="21262" stop="21732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344223" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT : GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG : GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG : GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</gDNA_template>
            <first_frame> *  G  D  S  T  Y  G  K  *  M  *  S  G  E  V  F  E  A  Y  T  P  Q  *  I  L  H  A  S  P  D  L  L  F  N  L  L  N  L :   W  R  W  S  L  K  T  V  V  C  I  S  C  Q  L  S  I  *  E  Y  T  A  P  L  L  I  V  R  S  D  R  F  A  V  R  R :   S  Y  L  V  G  V  M  S  E  L  C  L  Q  N  L  L  E  I  M  E  *   : G  Y  Y  L  M  T  C  I  R  L  E  S  L  H  G  T  T  S  T  I  L  E  V  T  N  L  P  S  *  E  I  T  S  E  L  *  R  N  M  D  *  A  A  I  H  L  D  E  D  D  L  K  T  C  P  *  E  G  *  S  T  L  F  K  L  E  T  S  S  L  Y  M  L  R  V  K  L  *  H  K  T  V  L  L  Q  I  F  *  R  L  A  L  D  M  L  S  Y  V  Q  G  Y  L  W  C  A  I  F  *  I  *  R  L  T  C  D  T  K  E  V  I  S  F  *  G  T  L  R  N  L  F  V  C  N  L  D  L  G  S  M  L  V  L  Q  N  N  M  L  D  *  M  K  G  T  V  N  V  E  S   </first_frame>
            <second_frame>  R  E  I  R  L  T  E  N  E  C  D  Q  E  R  C  S  K  H  I  H  H  S  R  F  S  T  P  H  Q  I  C  S  S  T  S  *  I   : C  G  G  G  V  *  K  R  *  S  V  *  V  V  S  *  V  F  E  N  I  Q  P  R  C  *  *  *  D  Q  I  D  L  R  *  E   : G  H  I  W  *  A  S  C  R  N  Y  V  C  R  T  Y  W  K  L  W  S  E  :  V  I  I  *  *  L  A  *  D  W  N  L  Y  M  G  L  L  L  P  S  W  K  *  Q  I  C  P  H  E  K  L  H  Q  N  S  E  E  T  W  T  K  P  R  S  T  *  T  K  M  T  L  R  R  A  H  E  K  A  D  P  H  Y  L  S  W  K  H  P  P  Y  I  C  S  E  *  N  C  D  I  K  L  Y  C  C  K  Y  S  K  D  *  L  L  I  C  Y  H  M  F  R  D  I  C  G  V  L  F  S  R  S  R  D  *  H  V  I  Q  K  R  S  L  V  S  K  E  H  *  G  T  S  S  F  V  I  *  I  W  E  A  C  W  C  C  R  T  T  C  L  I  E  *  K  E  Q  *  T  L  K  V  </second_frame>
            <third_frame>   G  R  F  D  L  R  K  M  N  V  I  R  R  G  V  R  S  I  Y  T  T  V  D  S  P  R  L  T  R  F  A  L  Q  P  P  K  F  :  V  E  V  E  F  E  N  G  S  L  Y  K  L  S  A  E  Y  L  R  I  Y  S  P  A  V  D  S  K  I  R  S  I  C  G  E  K  :  V  I  S  G  R  R  H  V  G  I  M  S  A  E  P  I  G  N  Y  G  V  R :   L  L  F  D  D  L  H  K  T  G  I  F  T  W  D  Y  F  Y  H  L  G  S  N  K  F  A  L  M  R  N  Y  I  R  T  L  K  K  H  G  L  S  R  D  P  P  R  R  R  *  P  *  D  V  P  M  R  R  L  I  H  T  I  *  A  G  N  I  L  L  I  Y  A  Q  S  E  I  V  T  *  N  C  T  V  A  N  I  L  K  T  S  S  *  Y  V  I  I  C  S  G  I  F  V  V  C  Y  F  L  D  L  E  I  D  M  *  Y  K  R  G  H  *  F  L  R  N  I  K  E  P  L  R  L  *  F  R  F  G  K  H  V  G  V  A  E  Q  H  A  *  L  N  E  R  N  S  K  R  *  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19315" stop="19425"/>
                    <exon start="20843" stop="20950"/>
                    <exon start="21111" stop="21175"/>
                    <exon start="21262" stop="21409"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRFDLRKMNVIRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIRSICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFALMRNYIRTLKKHGLSRDPPRRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="23316" PGL_stop="24239"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23316" e_stop="23606"/>
            <exon e_start="23703" e_stop="24239"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23316" e_stop="23606" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.972">
            <gDNA_intron_boundary i_start="23607" i_stop="23702" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="23703" e_stop="24239" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23316" stop="23606"/>
              <exon start="23703" stop="23915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313252" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23316" stop="23606"/>
              <exon start="23703" stop="23883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23385" stop="23606"/>
              <exon start="23703" stop="24239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23385" stop="23606"/>
              <exon start="23703" stop="24230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23458" stop="23606"/>
              <exon start="23703" stop="23798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23477" stop="23606"/>
              <exon start="23703" stop="24188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23537" stop="23606"/>
              <exon start="23703" stop="24144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312915" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG : GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG</gDNA_template>
            <first_frame> K  H  L  A  *  I  *  K  N  D  T  F  S  F  F  L  L  Y  E  W  P  F  L  N  N  V  Y  R  F  F  Y  I  *  I  S  N  L  N  A  E  I  Q  K  Q  R  D  R  *  E  P  *  K  I  I  F  K  *  R  H  N  N  Y  S  V  D  F  F  R  F  H  S  R  L  M  M  E  D  S  A  C  L  I  H  A  F  S  Y  A  S  A  I  P  N  E  I  K  Q  :  G  N  P  V  H  A  L  G  E  S  I  S  F  G  R  F  V  S  E  S  L  D  W  E  K  W  S  T  F  S  H  K  R  Y  V  E  E  A  E  R  Y  A  K  P  G  S  V  A  Q  K  K  A  F  F  E  A  H  Y  K  K  I  A  A  Q  K  A  A  A  L  L  E  Q  A  N  Q  Q  N  P  D  S  E  I  T  K  N  S  A  P  D  S  T  S  L  V  K  P  H  V  E  A  N  Q  E  E  V  H  E  N  P  D  A  L  T  T  D  S  M  V  K  A  S  V  S  V  A  D  V  E  E  I  E  S  E  S  P  V  E  G  P  G  T  P  E  A  T  E  K  E  P  S  N  H  I  E  N  G  E  T  Q  E  T  V  S  E  I  S  E  T  S  H  T  E  K  P  L  L  K  T  K </first_frame>
            <second_frame>  S  T  W  P  K  F  K  K  M  T  P  L  A  S  S  Y  S  M  S  G  L  S  *  T  T  C  I  A  F  F  T  F  E  F  Q  I  *  M  L  R  S  K  N  R  E  T  D  K  S  H  K  K  S  F  L  S  N  G  T  I  I  I  L  L  I  F  S  G  S  I  A  D  *  *  W  K  I  Q  L  V  L  Y  M  L  S  L  M  L  L  L  Y  P  M  K  *  N  R :   E  T  L  C  M  H  L  G  S  Q  F  L  L  G  D  L  C  L  S  L  *  I  G  K  N  G  Q  L  F  L  I  K  D  M  *  R  R  L  R  G  M  L  S  Q  V  L  L  P  K  K  K  L  S  L  K  P  I  T  R  K  L  L  P  K  R  L  Q  L  C  L  N  K  P  I  N  K  T  P  I  L  K  L  P  R  I  Q  P  L  I  L  L  H  L  *  N  L  M  *  K  L  I  K  K  R  F  M  R  T  L  M  L  *  Q  Q  I  P  W  L  R  L  L  F  Q  L  L  M  W  R  R  *  R  A  S  P  Q  W  R  V  Q  V  L  L  K  L  Q  R  K  N  H  Q  T  T  L  R  M  V  K  P  K  K  Q  F  L  R  L  V  K  H  L  I  L  R  S  L  C  *  R  L   </second_frame>
            <third_frame>   A  L  G  L  N  L  K  K  *  H  L  *  L  L  L  T  L  *  V  A  F  L  K  Q  R  V  S  L  F  L  H  L  N  F  K  F  K  C  *  D  P  K  T  E  R  Q  I  R  A  I  K  N  H  F  *  V  T  A  Q  *  L  F  C  *  F  F  Q  V  P  *  Q  T  D  D  G  R  F  S  L  S  Y  T  C  F  L  L  C  F  C  Y  T  Q  *  N  K  T   : G  K  P  C  A  C  T  W  G  V  N  F  F  W  E  I  C  V  *  V  F  R  L  G  K  M  V  N  F  F  S  *  K  I  C  R  G  G  *  E  V  C  *  A  R  F  C  C  P  K  K  S  F  L  *  S  P  L  Q  E  N  C  C  P  K  G  C  S  F  A  *  T  S  Q  S  T  K  P  R  F  *  N  Y  Q  E  F  S  P  *  F  Y  F  T  C  E  T  S  C  R  S  *  S  R  R  G  S  *  E  P  *  C  F  N  N  R  F  H  G  *  G  F  C  F  S  C  *  C  G  G  D  R  E  R  V  P  S  G  G  S  R  Y  S  *  S  Y  R  E  R  T  I  K  P  H  *  E  W  *  N  P  R  N  S  F  *  D  *  *  N  I  S  Y  *  E  A  F  A  E  D  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23487" stop="23606"/>
                    <exon start="23703" stop="24239"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHNNYSVDFFRFHSRLMMEDSACLIHAFSYASAIPNEIKQGNPVHALGESISFGRFVSESLDWEKWSTFSHKRYVEEAERYAKPGSVAQKKAFFEAHYKKIAAQKAAALLEQANQQNPDSEITKNSAPDSTSLVKPHVEANQEEVHENPDALTTDSMVKASVSVADVEEIESESPVEGPGTPEATEKEPSNHIENGETQETVSEISETSHTEKPLLKTK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="24792" PGL_stop="27134"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24892" e_stop="24998"/>
            <exon e_start="25088" e_stop="25146"/>
            <exon e_start="25738" e_stop="25837"/>
            <exon e_start="25928" e_stop="25990"/>
            <exon e_start="26479" e_stop="26589"/>
            <exon e_start="26777" e_stop="27098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.455" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24892" e_stop="24998" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25088" e_stop="25146" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.891">
            <gDNA_intron_boundary i_start="25147" i_stop="25737" i_length="591"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25738" e_stop="25837" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="25928" e_stop="25990" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.455">
            <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26479" e_stop="26589" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="26777" e_stop="27098" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24892" stop="24998"/>
              <exon start="25088" stop="25146"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="27044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24892" stop="24998"/>
              <exon start="25088" stop="25146"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25090" stop="25146"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="27098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25808" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="26967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG : GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG : TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG : AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG : GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG : ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAC</gDNA_template>
            <first_frame> T  R  Y  L  L  H  L  P  S  S  R  R  K  V  Q  R  L  L  P  L  L  A  R  H  L  S  I  V  Q  L  H  L  R  L  L  W :   Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E   : V  P  S  L  S  Q  P  T  E  T  N  Y  N  H  Q  L  Y  P  L  L  S  H  *  E  Q  K  K  E  L  H  E  G  N  R :   S  L  K  K  N  S  M  R  R  R  K  R  R  F  N  N  K  Q  H  *  R :   R  K  Q  E  R  N  L  G  N  L  D  K  A  F  A  S  K  L  V  P  C  L  I  S  T  R  K  Q  K  Q  Q  K  I  M  Q  K  R :   S  Q  *  H  K  L  H  C  P  N  V  E  E  C  H  I  P  A  Q  S  K  A  *  S  R  *  K  M  T  L  A  R  I  Q  E  R  R  L  A  E  K  T  H  K  S  I  T  P  C  K  E  *  C  L  I  R  M  C  F  N  W  V  F  L  P  R  E  C  F  G  G  V  S  F  L  N  M  I  *  G  E  A  T  P  K  S  C  I  K  S  Y  P  D  V  K  L  F  *  P  Q  S  F  T  F  Y  I  N </first_frame>
            <second_frame>  Q  D  T  S  S  T  S  L  P  Q  E  G  K  F  K  G  C  S  R  Y  *  Q  G  I  *  A  L  C  N  S  T  *  D  S  Y   : G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  :  F  Q  V  F  H  S  L  P  K  Q  I  T  I  T  N  F  I  H  S  F  L  T  E  N  R  R  K  S  C  T  K  E  T   : E  A  *  R  K  I  Q  C  E  G  G  K  E  G  S  T  T  N  N  I  K   : G  E  S  R  N  G  T  *  E  T  W  T  K  L  L  L  Q  S  S  S  P  A  *  F  L  Q  G  N  R  N  S  K  R  S  C  K  K   : D  P  S  N  T  S  S  I  A  Q  T  W  K  N  A  I  S  Q  L  K  A  R  L  S  L  D  E  K  *  L  L  Q  E  S  K  K  E  D  *  L  K  K  L  T  N  P  S  L  L  A  K  S  S  V  L  L  E  C  V  S  I  G  Y  F  F  Q  E  N  V  L  E  V  C  L  S  L  I  *  F  K  E  K  Q  L  Q  N  L  V  *  K  A  I  Q  T  *  N  Y  F  N  H  N  H  L  P  F  I  L   </second_frame>
            <third_frame>   K  I  P  P  P  P  P  F  L  K  K  E  S  S  K  V  A  P  A  T  S  K  A  S  K  H  C  A  T  P  L  K  T  P  M  :  A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  S :   S  K  S  F  T  A  Y  R  N  K  L  Q  S  P  T  L  S  T  P  F  S  L  R  T  E  E  R  A  A  R  R  K  Q  :  K  L  E  E  K  F  N  A  K  E  E  K  K  V  Q  Q  Q  T  T  L  K  :  E  K  A  G  T  E  L  R  K  L  G  Q  S  F  C  F  K  A  R  P  L  P  D  F  Y  K  E  T  E  T  A  K  D  H  A  K  K  :  I  P  V  T  Q  A  P  L  P  K  R  G  R  M  P  Y  P  S  S  K  Q  G  L  V  S  M  K  N  D  S  C  K  N  P  R  K  K  T  S  *  K  N  S  Q  I  H  H  S  L  Q  R  V  V  S  Y  *  N  V  F  Q  L  G  I  S  S  K  R  M  F  W  R  C  V  F  P  *  Y  D  L  R  R  S  N  S  K  I  L  Y  K  K  L  S  R  R  K  I  I  L  T  T  I  I  Y  L  L  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24894" stop="24998"/>
                    <exon start="25088" stop="25146"/>
                    <exon start="25738" stop="25837"/>
                    <exon start="25928" stop="25990"/>
                    <exon start="26479" stop="26589"/>
                    <exon start="26777" stop="26896"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIPPPPPFLKKESSKVAPATSKASKHCATPLKTPMATSNGASNHPMTTPSSESRSSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAGTELRKLGQSFCFKARPLPDFYKETETAKDHAKKIPVTQAPLPKRGRMPYPSSKQGLVSMKNDSCKNPRKKTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24792" e_stop="24998"/>
            <exon e_start="25088" e_stop="25146"/>
            <exon e_start="25270" e_stop="25344"/>
            <exon e_start="25738" e_stop="25837"/>
            <exon e_start="25928" e_stop="25990"/>
            <exon e_start="26479" e_stop="26589"/>
            <exon e_start="26777" e_stop="27134"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.932"/>
          <exon-intron don_prob="0.999" acc_prob="0.979" e_score="0.983"/>
          <exon-intron don_prob="0.868" acc_prob="0.891" e_score="0.980"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.455" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="24792" e_stop="24998" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24999" i_stop="25087" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="25088" e_stop="25146" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.979">
            <gDNA_intron_boundary i_start="25147" i_stop="25269" i_length="123"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="25270" e_stop="25344" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.868" acc_prob="0.891">
            <gDNA_intron_boundary i_start="25345" i_stop="25737" i_length="393"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="25738" e_stop="25837" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="25838" i_stop="25927" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25928" e_stop="25990" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.455">
            <gDNA_intron_boundary i_start="25991" i_stop="26478" i_length="488"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26479" e_stop="26589" e_length="111"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="26590" i_stop="26776" i_length="187"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="26777" e_stop="27134" e_length="358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24792" stop="24998"/>
              <exon start="25088" stop="25146"/>
              <exon start="25270" stop="25344"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25294" stop="25344"/>
              <exon start="25738" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="27134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314407" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25808" stop="25837"/>
              <exon start="25928" stop="25990"/>
              <exon start="26479" stop="26589"/>
              <exon start="26777" stop="26967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAATCACAACTAATACTAACTTGGACTTGATGAATGAAATGAGATCAACCCCAAAATCTTTGAGCAAGTTGATCAACTTTACTCCTGCCAAAGAGCCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG : GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG : GATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGT : TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG : AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG : GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG : ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATT</gDNA_template>
            <first_frame> P  I  T  T  N  T  N  L  D  L  M  N  E  M  R  S  T  P  K  S  L  S  K  L  I  N  F  T  P  A  K  E  P  H  K  I  P  P  P  P  P  F  L  K  K  E  S  S  K  V  A  P  A  T  S  K  A  S  K  H  C  A  T  P  L  K  T  P  M  :  A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  R :   I  K  T  P  I  H  P  T  A  S  G  S  I  T  A  G  P  K  W  N  I  L  S  S  V :   S  K  S  F  T  A  Y  R  N  K  L  Q  S  P  T  L  S  T  P  F  S  L  R  T  E  E  R  A  A  R  R  K  Q  :  K  L  E  E  K  F  N  A  K  E  E  K  K  V  Q  Q  Q  T  T  L  K  :  E  K  A  G  T  E  L  R  K  L  G  Q  S  F  C  F  K  A  R  P  L  P  D  F  Y  K  E  T  E  T  A  K  D  H  A  K  K  :  I  P  V  T  Q  A  P  L  P  K  R  G  R  M  P  Y  P  S  S  K  Q  G  L  V  S  M  K  N  D  S  C  K  N  P  R  K  K  T  S  *  K  N  S  Q  I  H  H  S  L  Q  R  V  V  S  Y  *  N  V  F  Q  L  G  I  S  S  K  R  M  F  W  R  C  V  F  P  *  Y  D  L  R  R  S  N  S  K  I  L  Y  K  K  L  S  R  R  K  I  I  L  T  T  I  I  Y  L  L  Y  *  R  S  Q  V  N  I  V  L  I  H  S  N  </first_frame>
            <second_frame>  Q  S  Q  L  I  L  T  W  T  *  *  M  K  *  D  Q  P  Q  N  L  *  A  S  *  S  T  L  L  L  P  K  S  H  T  R  Y  L  L  H  L  P  S  S  R  R  K  V  Q  R  L  L  P  L  L  A  R  H  L  S  I  V  Q  L  H  L  R  L  L  W :   Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E   : G  L  K  H  R  F  I  P  Q  L  Q  E  V  *  Q  Q  G  L  N  G  T  F  C  L  L   : F  P  S  L  S  Q  P  T  E  T  N  Y  N  H  Q  L  Y  P  L  L  S  H  *  E  Q  K  K  E  L  H  E  G  N  R :   S  L  K  K  N  S  M  R  R  R  K  R  R  F  N  N  K  Q  H  *  R :   R  K  Q  E  R  N  L  G  N  L  D  K  A  F  A  S  K  L  V  P  C  L  I  S  T  R  K  Q  K  Q  Q  K  I  M  Q  K  R :   S  Q  *  H  K  L  H  C  P  N  V  E  E  C  H  I  P  A  Q  S  K  A  *  S  R  *  K  M  T  L  A  R  I  Q  E  R  R  L  A  E  K  T  H  K  S  I  T  P  C  K  E  *  C  L  I  R  M  C  F  N  W  V  F  L  P  R  E  C  F  G  G  V  S  F  L  N  M  I  *  G  E  A  T  P  K  S  C  I  K  S  Y  P  D  V  K  L  F  *  P  Q  S  F  T  F  Y  I  N  V  L  K  S  I  L  S  S  Y  I  Q  I </second_frame>
            <third_frame>   N  H  N  *  Y  *  L  G  L  D  E  *  N  E  I  N  P  K  I  F  E  Q  V  D  Q  L  Y  S  C  Q  R  A  T  Q  D  T  S  S  T  S  L  P  Q  E  G  K  F  K  G  C  S  R  Y  *  Q  G  I  *  A  L  C  N  S  T  *  D  S  Y   : G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  :  D  *  N  T  D  S  S  H  S  F  R  K  Y  N  S  R  A  *  M  E  H  F  V  F  C  :  F  Q  V  F  H  S  L  P  K  Q  I  T  I  T  N  F  I  H  S  F  L  T  E  N  R  R  K  S  C  T  K  E  T   : E  A  *  R  K  I  Q  C  E  G  G  K  E  G  S  T  T  N  N  I  K   : G  E  S  R  N  G  T  *  E  T  W  T  K  L  L  L  Q  S  S  S  P  A  *  F  L  Q  G  N  R  N  S  K  R  S  C  K  K   : D  P  S  N  T  S  S  I  A  Q  T  W  K  N  A  I  S  Q  L  K  A  R  L  S  L  D  E  K  *  L  L  Q  E  S  K  K  E  D  *  L  K  K  L  T  N  P  S  L  L  A  K  S  S  V  L  L  E  C  V  S  I  G  Y  F  F  Q  E  N  V  L  E  V  C  L  S  L  I  *  F  K  E  K  Q  L  Q  N  L  V  *  K  A  I  Q  T  *  N  Y  F  N  H  N  H  L  P  F  I  L  T  F  S  S  Q  Y  C  P  H  T  F  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24792" stop="24998"/>
                    <exon start="25088" stop="25146"/>
                    <exon start="25270" stop="25344"/>
                    <exon start="25738" stop="25837"/>
                    <exon start="25928" stop="25990"/>
                    <exon start="26479" stop="26589"/>
                    <exon start="26777" stop="26896"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PITTNTNLDLMNEMRSTPKSLSKLINFTPAKEPHKIPPPPPFLKKESSKVAPATSKASKHCATPLKTPMATSNGASNHPMTTPSSESRRIKTPIHPTASGSITAGPKWNILSSVSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAGTELRKLGQSFCFKARPLPDFYKETETAKDHAKKIPVTQAPLPKRGRMPYPSSKQGLVSMKNDSCKNPRKKTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="25086" e_stop="25752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="25086" e_stop="25752" e_length="667"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25086" stop="25752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560409" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCAC</gDNA_template>
            <first_frame> R  Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E  G  I  F  P  Y  I  V  *  L  E  L  L  A  S  I  S  L  I  P  L  I  H  G  S  L  V  F  S  H  L  P  H  S  N  S  C  I  F  V  F  T  G  L  K  H  R  F  I  P  Q  L  Q  E  V  *  Q  Q  G  L  N  G  T  F  C  L  L  C  K  C  L  L  H  D  D  L  R  F  *  H  N  H  L  Y  I  *  M  N  S  S  R  V  F  S  L  Y  V  *  K  L  L  V  E  G  S  S  *  V  *  P  G  S  V  I  T  Q  N  R  Y  L  L  V  D  T  V  *  A  L  F  Q  D  Q  E  T  F  *  R  E  S  E  R  Q  L  F  L  L  E  F  S  Y  L  P  H  T  *  V  C  W  C  V  M  C  Q  T  I  M  N  Q  D  S  D  N  L  L  S  A  S  I  *  L  *  S  I  *  L  P  H  W  I  S  L  T  F  V  V  P  C  S  V  P  S  L  S  </first_frame>
            <second_frame>  G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  V  Y  F  P  I  L  S  N  *  N  C  *  Q  A  F  H  *  F  H  *  Y  M  V  L  W  F  F  P  T  F  P  T  R  I  L  V  S  S  Y  L  Q  D  *  N  T  D  S  S  H  S  F  R  K  Y  N  S  R  A  *  M  E  H  F  V  F  C  V  S  A  Y  Y  M  M  T  L  D  S  S  I  I  I  Y  T  F  E  *  I  V  V  E  C  F  R  F  T  F  K  N  C  W  L  K  V  Q  A  K  C  N  Q  A  L  S  *  L  K  I  G  I  F  *  W  I  Q  F  E  H  F  S  R  T  R  K  P  F  K  E  N  L  R  D  S  C  F  Y  L  N  L  V  I  F  H  T  H  K  Y  V  G  V  *  C  V  K  L  S  *  T  R  T  V  I  I  F  F  L  Q  V  F  D  Y  R  V  Y  N  C  L  I  G  Y  R  L  P  L  L  F  L  V  Q  F  Q  V  F  H </second_frame>
            <third_frame>   A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  R  Y  I  S  L  Y  C  L  I  R  I  V  S  K  H  F  I  D  S  I  N  T  W  F  F  G  F  F  P  P  S  P  L  E  F  L  Y  L  R  I  Y  R  I  K  T  P  I  H  P  T  A  S  G  S  I  T  A  G  P  K  W  N  I  L  S  S  V  *  V  P  I  T  *  *  P  *  I  L  A  *  S  F  I  H  L  N  E  *  *  *  S  V  F  A  L  R  L  K  T  A  G  *  R  F  K  L  S  V  T  R  L  C  H  N  S  K  *  V  S  F  S  G  Y  S  L  S  T  F  P  G  P  G  N  L  L  K  R  I  *  E  T  V  V  S  T  *  I  *  L  S  S  T  H  I  S  M  L  V  C  D  V  S  N  Y  H  E  P  G  Q  *  *  S  S  F  C  K  Y  L  I  I  E  Y  I  I  A  S  L  D  I  A  Y  L  C  C  S  L  F  S  S  K  S  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25088" stop="25348"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATSNGASNHPMTTPSSESRRYISLYCLIRIVSKHFIDSINTWFFGFFPPSPLEFLYLRIYRIKTPIHPTASGSITAGPKWNILSSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="28275" PGL_stop="27527"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28275" e_stop="27527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="28275" e_stop="27527" e_length="749"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28275" stop="27662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28257" stop="27673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28237" stop="27527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28237" stop="27534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28236" stop="27777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308829" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGACATTGCAT</gDNA_template>
            <first_frame> F  *  I  N  H  F  L  N  F  L  F  V  E  K  K  F  H  F  I  L  Q  K  *  G  E  K  V  A  N  T  V  W  S  V  L  T  Q  F  Y  P  L  H  G  T  Q  D  P  S  P  G  T  *  T  S  P  I  H  H  Q  P  L  G  F  S  Q  R  S  Q  L  S  P  V  T  I  P  S  S  P  A  S  A  V  D  P  G  A  P  A  A  M  F  I  Q  L  Q  N  P  R  T  K  L  R  A  H  K  S  *  R  D  A  A  T  S  F  R  W  L  L  G  E  L  W  M  L  G  L  G  S  I  F  Q  G  F  Q  L  L  E  F  W  I  I  W  I  A  I  L  L  I  T  W  I  M  K  F  T  M  M  K  I  T  V  T  E  I  R  N  *  *  L  T  P  M  G  L  Q  R  S  A  L  R  L  K  I  T  M  K  K  K  *  V  S  A  R  W  D  L  C  G  K  M  L  K  K  M  K  I  G  V  L  W  K  E  S  N  S  V  P  S  N  C  I  C  V  N  L  L  N  K  N  C  Y  I  S  V  I  V  F  T  V  K  *  I  G  T  F  R  *  H  C   </first_frame>
            <second_frame>  S  K  S  I  I  F  *  I  F  Y  S  *  R  K  S  F  I  L  F  F  K  N  E  E  R  R  S  P  T  R  Y  G  P  Y  L  P  N  F  T  L  S  M  E  P  K  T  R  A  Q  V  H  E  Q  V  Q  F  T  T  N  R  W  A  F  R  K  G  P  N  *  A  Q  *  P  F  Q  V  H  R  Q  V  R  *  T  Q  V  H  Q  L  P  C  S  S  S  C  K  I  Q  G  Q  N  *  G  H  T  K  V  K  G  M  R  R  R  R  F  V  G  Y  L  E  S  C  G  C  *  A  W  V  Q  F  F  R  V  F  S  Y  W  N  F  G  S  F  G  *  R  F  F  L  L  H  G  S  *  N  L  L  *  *  R  L  R  L  R  R  S  G  I  S  S  *  L  R  W  V  S  S  D  R  R  *  D  *  R  *  R  *  R  K  N  E  F  L  R  G  G  I  C  V  G  R  C  *  R  R  *  R  L  V  C  C  G  R  N  L  I  Q  F  L  P  T  V  F  V  L  T  C  *  T  K  I  V  T  F  L  *  L  Y  L  L  S  N  K  L  E  H  F  D  D  I  A  </second_frame>
            <third_frame>   L  N  Q  S  F  F  E  F  F  I  R  R  E  K  V  S  F  Y  S  S  K  M  R  R  E  G  R  Q  H  G  M  V  R  T  Y  P  I  L  P  S  P  W  N  P  R  P  E  P  R  Y  M  N  K  S  N  S  P  P  T  A  G  L  F  A  K  V  P  T  K  P  S  N  H  S  K  F  T  G  K  C  G  R  P  R  C  T  S  C  H  V  H  P  A  A  K  S  K  D  K  T  K  G  T  Q  K  L  K  G  C  G  D  V  V  S  L  V  T  W  R  V  V  D  A  R  P  G  F  N  F  S  G  F  S  A  T  G  I  L  D  H  L  D  S  D  S  S  Y  Y  M  D  H  E  I  Y  Y  D  E  D  Y  G  Y  G  D  Q  E  L  V  V  D  S  D  G  S  P  A  I  G  V  E  I  E  D  N  D  E  E  K  M  S  F  C  E  V  G  F  V  W  E  D  V  E  E  D  E  D  W  C  V  V  E  G  I  *  F  S  S  F  Q  L  Y  L  C  *  P  V  E  Q  K  L  L  H  F  C  N  C  I  Y  C  Q  I  N  W  N  I  S  M  T  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28273" stop="27635"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNQSFFEFFIRREKVSFYSSKMRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCGRPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVSLVTWRVVDARPGFNFSGFSATGILDHLDSDSSYYMDHEIYYDEDYGYGDQELVVDSDGSPAIGVEIEDNDEEKMSFCEVGFVWEDVEEDEDWCVVEGI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="27557" PGL_stop="28186"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27557" e_stop="28186"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="27557" e_stop="28186" e_length="630"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27557" stop="28186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430842" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGACAGTAAATACAATTACAGAAATGTAACAATTTTTGTTCAACAGGTTAACACAAATACAGTTGGAAGGAACTGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATCTTCCCACACAAATCCCACCTCGCAGAAACTCATTTTTTCTTCATCGTTATCTTCAATCTCAACGCCGATCGCTGGAGACCCATCGGAGTCAACTACTAATTCCTGATCTCCGTAACCGTAATCTTCATCATAGTAAATTTCATGATCCATGTAATAAGAAGAATCGCTATCCAAATGATCCAAAATTCCAGTAGCTGAAAACCCTGAAAAATTGAACCCAGGCCTAGCATCCACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGCATCCCTTTAACTTTTGTGTGCCCTTAGTTTTGTCCTTGGATTTTGCAGCTGGATGAACATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</gDNA_template>
            <first_frame> L  T  V  N  T  I  T  E  M  *  Q  F  L  F  N  R  L  T  Q  I  Q  L  E  G  T  E  L  D  S  F  H  N  T  P  I  F  I  F  F  N  I  F  P  H  K  S  H  L  A  E  T  H  F  F  F  I  V  I  F  N  L  N  A  D  R  W  R  P  I  G  V  N  Y  *  F  L  I  S  V  T  V  I  F  I  I  V  N  F  M  I  H  V  I  R  R  I  A  I  Q  M  I  Q  N  S  S  S  *  K  P  *  K  I  E  P  R  P  S  I  H  N  S  P  S  N  Q  R  N  D  V  A  A  S  L  *  L  L  C  A  L  S  F  V  L  G  F  C  S  W  M  N  M  A  A  G  A  P  G  S  T  A  L  A  G  E  L  G  M  V  T  G  L  S  W  D  L  C  E  K  P  S  G  W  W  *  I  G  L  V  H  V  P  G  L  G  S  W  V  P  W  R  G  *  N  W  V  S  T  D  H  T </first_frame>
            <second_frame>  *  Q  *  I  Q  L  Q  K  C  N  N  F  C  S  T  G  *  H  K  Y  S  W  K  E  L  N  *  I  P  S  T  T  H  Q  S  S  S  S  S  T  S  S  H  T  N  P  T  S  Q  K  L  I  F  S  S  S  L  S  S  I  S  T  P  I  A  G  D  P  S  E  S  T  T  N  S  *  S  P  *  P  *  S  S  S  *  *  I  S  *  S  M  *  *  E  E  S  L  S  K  *  S  K  I  P  V  A  E  N  P  E  K  L  N  P  G  L  A  S  T  T  L  Q  V  T  N  E  T  T  S  P  H  P  F  N  F  C  V  P  L  V  L  S  L  D  F  A  A  G  *  T  W  Q  L  V  H  L  G  L  P  H  L  P  V  N  L  E  W  L  L  G  L  V  G  T  F  A  K  S  P  A  V  G  G  E  L  D  L  F  M  Y  L  G  S  G  L  G  F  H  G  E  G  K  I  G  *  V  R  T  I   </second_frame>
            <third_frame>   D  S  K  Y  N  Y  R  N  V  T  I  F  V  Q  Q  V  N  T  N  T  V  G  R  N  *  I  R  F  L  P  Q  H  T  N  L  H  L  L  Q  H  L  P  T  Q  I  P  P  R  R  N  S  F  F  L  H  R  Y  L  Q  S  Q  R  R  S  L  E  T  H  R  S  Q  L  L  I  P  D  L  R  N  R  N  L  H  H  S  K  F  H  D  P  C  N  K  K  N  R  Y  P  N  D  P  K  F  Q  *  L  K  T  L  K  N  *  T  Q  A  *  H  P  Q  L  S  K  *  P  T  K  R  R  R  R  I  P  L  T  F  V  C  P  *  F  C  P  W  I  L  Q  L  D  E  H  G  S  W  C  T  W  V  Y  R  T  C  R  *  T  W  N  G  Y  W  A  *  L  G  P  L  R  K  A  Q  R  L  V  V  N  W  T  C  S  C  T  W  A  R  V  L  G  S  M  E  R  V  K  L  G  K  Y  G  P  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27634" stop="27873"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRFLPQHTNLHLLQHLPTQIPPRRNSFFLHRYLQSQRRSLETHRSQLLIPDLRNRNLHHSKFHDPCNKKNRYPNDPKFQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="42038" PGL_stop="41133"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42038" e_stop="41889"/>
            <exon e_start="41814" e_stop="41682"/>
            <exon e_start="41601" e_stop="41512"/>
            <exon e_start="41428" e_stop="41304"/>
            <exon e_start="41154" e_stop="41133"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.911" e_score="1.000"/>
          <exon-intron don_prob="0.594" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.700" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="0.992"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="42038" e_stop="41889" e_length="150"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.911">
            <gDNA_intron_boundary i_start="41888" i_stop="41815" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41814" e_stop="41682" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.594" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41681" i_stop="41602" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41601" e_stop="41512" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.938" acc_prob="0.700">
            <gDNA_intron_boundary i_start="41511" i_stop="41429" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="41428" e_stop="41304" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41303" i_stop="41155" i_length="149"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41154" e_stop="41133" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42038" stop="41889"/>
              <exon start="41814" stop="41682"/>
              <exon start="41601" stop="41512"/>
              <exon start="41428" stop="41376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42036" stop="41889"/>
              <exon start="41814" stop="41682"/>
              <exon start="41601" stop="41512"/>
              <exon start="41428" stop="41304"/>
              <exon start="41154" stop="41133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42036" stop="41889"/>
              <exon start="41814" stop="41682"/>
              <exon start="41601" stop="41512"/>
              <exon start="41428" stop="41384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274737" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTTTTGTCTTCAATCTAGTTTGTTAATTAATGGCTTCTTGGAATTCCGTTCCACTGGAAGTGTTGTATAATGTTTTGGGATGGATTGCGTTTGTGTCATGGTCTATTAGCTTTTATCCTCAGGTCATTTTGAATTTTCGTCGGAAAAG : TGTGGTGGGATTGAATTTTGATTTCGTGGTGTTGAATTTGACAAAGCACTCGTCTTATCTCATCTACAATGCTTCCATGTTCTTCAGTTGTGCTGTTCAAAGGCAATATCATAATCGATATGGCAAAAATGAG : ATGATACCTGTAGCTGCCAATGATGTGGCTTTCTCTACTCATGCTCTTCTTTTAACAGCCTTTACCTTGTTTCAGATCTCTATCTATGAT : CGTGGAAATCAGAAGGTATCGAAAATTGCTATAGCAATTGTTTCTGTTGCTTGGTTAAGTGTTGCAGTTTGTGTGTTTGTGGCTATCCCTAAGCATTCCTGGCTATGGCTAGTGTCCTGTTTCAA : CGGATTGCAGGTTGCTATGACA</gDNA_template>
            <first_frame> D  F  C  L  Q  S  S  L  L  I  N  G  F  L  E  F  R  S  T  G  S  V  V  *  C  F  G  M  D  C  V  C  V  M  V  Y  *  L  L  S  S  G  H  F  E  F  S  S  E  K  :  C  G  G  I  E  F  *  F  R  G  V  E  F  D  K  A  L  V  L  S  H  L  Q  C  F  H  V  L  Q  L  C  C  S  K  A  I  S  *  S  I  W  Q  K  *   : D  D  T  C  S  C  Q  *  C  G  F  L  Y  S  C  S  S  F  N  S  L  Y  L  V  S  D  L  Y  L  *   : S  W  K  S  E  G  I  E  N  C  Y  S  N  C  F  C  C  L  V  K  C  C  S  L  C  V  C  G  Y  P  *  A  F  L  A  M  A  S  V  L  F  Q  :  R  I  A  G  C  Y  D  </first_frame>
            <second_frame>  I  F  V  F  N  L  V  C  *  L  M  A  S  W  N  S  V  P  L  E  V  L  Y  N  V  L  G  W  I  A  F  V  S  W  S  I  S  F  Y  P  Q  V  I  L  N  F  R  R  K  S :   V  V  G  L  N  F  D  F  V  V  L  N  L  T  K  H  S  S  Y  L  I  Y  N  A  S  M  F  F  S  C  A  V  Q  R  Q  Y  H  N  R  Y  G  K  N  E  :  M  I  P  V  A  A  N  D  V  A  F  S  T  H  A  L  L  L  T  A  F  T  L  F  Q  I  S  I  Y  D  :  R  G  N  Q  K  V  S  K  I  A  I  A  I  V  S  V  A  W  L  S  V  A  V  C  V  F  V  A  I  P  K  H  S  W  L  W  L  V  S  C  F  N :   G  L  Q  V  A  M  T </second_frame>
            <third_frame>   F  L  S  S  I  *  F  V  N  *  W  L  L  G  I  P  F  H  W  K  C  C  I  M  F  W  D  G  L  R  L  C  H  G  L  L  A  F  I  L  R  S  F  *  I  F  V  G  K   : V  W  W  D  *  I  L  I  S  W  C  *  I  *  Q  S  T  R  L  I  S  S  T  M  L  P  C  S  S  V  V  L  F  K  G  N  I  I  I  D  M  A  K  M  R :   *  Y  L  *  L  P  M  M  W  L  S  L  L  M  L  F  F  *  Q  P  L  P  C  F  R  S  L  S  M  I :   V  E  I  R  R  Y  R  K  L  L  *  Q  L  F  L  L  L  G  *  V  L  Q  F  V  C  L  W  L  S  L  S  I  P  G  Y  G  *  C  P  V  S   : T  D  C  R  L  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42010" stop="41889"/>
                    <exon start="41814" stop="41682"/>
                    <exon start="41601" stop="41512"/>
                    <exon start="41428" stop="41304"/>
                    <exon start="41154" stop="41133"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMASWNSVPLEVLYNVLGWIAFVSWSISFYPQVILNFRRKSVVGLNFDFVVLNLTKHSSYLIYNASMFFSCAVQRQYHNRYGKNEMIPVAANDVAFSTHALLLTAFTLFQISIYDRGNQKVSKIAIAIVSVAWLSVAVCVFVAIPKHSWLWLVSCFNGLQVAMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="46450" PGL_stop="50182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46450" e_stop="46954"/>
            <exon e_start="47113" e_stop="47287"/>
            <exon e_start="49092" e_stop="49369"/>
            <exon e_start="49541" e_stop="49905"/>
            <exon e_start="50151" e_stop="50182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.990"/>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.562"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="46450" e_stop="46954" e_length="505"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47113" e_stop="47287" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49092" e_stop="49369" e_length="278"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="49541" e_stop="49905" e_length="365"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49906" i_stop="50150" i_length="245"/>
          </intron>
          <exon e_serial="5" e_score="0.562">
            <gDNA_exon_boundary e_start="50151" e_stop="50182" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46450" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46457" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46481" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46482" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46488" stop="46954"/>
              <exon start="47113" stop="47162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46500" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46507" stop="46954"/>
              <exon start="47113" stop="47220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46764" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="49614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47172" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="49872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49170" stop="49369"/>
              <exon start="49541" stop="49905"/>
              <exon start="50151" stop="50182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243897" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49333" stop="49369"/>
              <exon start="49541" stop="49834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG : AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG : GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTAC : TCACCTAATGAGAAAAAAATTAATACTATTTG</gDNA_template>
            <first_frame> A  N  S  T  S  S  A  A  S  I  V  F  S  P  S  Y  G  G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : G  S  R  W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  * :   A  S  S  R  E  N  *  S  P  S  *  V  G  R  V  R  I  R  L  Q  T  H  C  T  H  Q  F  F  W  W  Q  A  R  *  W  S  C  *  C  H  R  K  R  S  Q  E  N  R  *  L  *  I  G  N  H  *  C  N  C  F  S  C  T  F  F  S  H  C  T  W  N  F  P  W  *  I  G  D  *  G  S  Y  *  V  N  *  A  *  G  R  F  A   : G  *  Q  L  G  S  C  *  R  W  S  *  C  *  Y  C  R  F  K  S  S  D  C  V  C  C  G  V  P  W  T  Y  K  E  C  I  N  F  G  N  I  L  V  S  L  T  F  S  *  G  H  Q  R  G  E  V  N  M  L  G  K  L  Y  *  A  Y  C  F  H  K  N  G  R  *  L  L  Q  I  T  C  *  *  G  I  M  N  I  F  F  *  I  R  M  H  F  F  E  L  G  L  P  I  N  F  D  S  L  L  M  Y  V  V  N  E  E  S  K  S  S  I  F  Y  :  S  P  N  E  K  K  I  N  T  I   </first_frame>
            <second_frame>  Q  I  Q  R  L  Q  L  H  P  S  S  S  L  Q  A  M  A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  E  A  D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L   : E  R  Q  V  E  K  I  D  P  L  L  K  W  V  E  S  E  F  G  F  K  P  T  V  H  T  S  F  F  G  G  K  Q  D  D  G  L  V  S  A  I  G  S  V  L  K  K  T  D  D  C  E  L  A  T  I  D  A  I  A  S  A  A  H  S  L  V  I  A  L  G  I  F  R  G  R  L  G  I  E  E  A  I  E  L  I  R  L  E  E  D  L  Q  :  V  D  N  W  G  L  V  E  G  G  H  D  V  D  I  A  D  L  R  V  Q  I  A  S  A  V  V  F  L  G  L  T  R  S  V  *  I  L  V  I  F  *  *  V  L  P  S  V  E  V  T  N  E  V  K  S  I  C  W  V  S  C  I  K  L  I  A  F  T  R  T  G  D  D  C  C  K  *  P  A  D  E  E  *  *  T  Y  F  S  E  F  E  C  T  S  L  N  L  D  Y  P  S  I  L  I  V  Y  *  C  M  L  *  M  K  R  A  N  Q  V  S  F  T :   H  L  M  R  K  K  L  I  L  F  </second_frame>
            <third_frame>   K  F  N  V  F  S  C  I  H  R  L  L  S  K  L  W  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   K  Q  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  :  S  V  K  *  R  K  L  I  P  F  L  S  G  *  S  Q  N  S  A  S  N  P  L  Y  T  P  V  F  L  V  A  S  K  M  M  V  L  L  V  P  S  E  A  F  S  R  K  Q  M  I  V  N  W  Q  P  L  M  Q  L  L  Q  L  H  I  L  *  S  L  H  L  E  F  S  V  V  D  W  G  L  R  K  L  L  S  *  L  G  L  R  K  I  C  R :   L  T  I  G  V  L  L  K  V  V  M  M  L  I  L  Q  I  *  E  F  R  L  R  L  L  W  C  S  L  D  L  Q  G  V  Y  K  F  W  *  Y  F  S  E  S  Y  L  Q  L  R  S  P  T  R  *  S  Q  Y  V  G  *  V  V  L  S  L  L  L  S  Q  E  R  E  M  I  A  A  N  N  L  L  M  R  N  N  E  H  I  F  L  N  S  N  A  L  L  *  T  W  T  T  H  Q  F  *  *  F  I  D  V  C  C  K  *  R  E  Q  I  K  Y  L  L   : L  T  *  *  E  K  N  *  Y  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46451" stop="46954"/>
                    <exon start="47113" stop="47287"/>
                    <exon start="49092" stop="49369"/>
                    <exon start="49541" stop="49648"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1062</number_coding_nucleotides>
                  <number_encoded_amino_acids>354</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIQRLQLHPSSSLQAMAAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQEADGIRPFTMPLMKLSCTALERVPLTRHKIIEYLMKKFPQDLVFCRAPGDNDLTSGVLERQVEKIDPLLKWVESEFGFKPTVHTSFFGGKQDDGLVSAIGSVLKKTDDCELATIDAIASAAHSLVIALGIFRGRLGIEEAIELIRLEEDLQVDNWGLVEGGHDVDIADLRVQIASAVVFLGLTRSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="46450" e_stop="46954"/>
            <exon e_start="47113" e_stop="47287"/>
            <exon e_start="49092" e_stop="49369"/>
            <exon e_start="49541" e_stop="49912"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.990"/>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="46450" e_stop="46954" e_length="505"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47113" e_stop="47287" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49092" e_stop="49369" e_length="278"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="49541" e_stop="49912" e_length="372"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46450" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46457" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46481" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46482" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46488" stop="46954"/>
              <exon start="47113" stop="47162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46500" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46507" stop="46954"/>
              <exon start="47113" stop="47220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46764" stop="46954"/>
              <exon start="47113" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="49614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47172" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="49872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49303" stop="49369"/>
              <exon start="49541" stop="49912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250944" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49333" stop="49369"/>
              <exon start="49541" stop="49834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAATTCAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG : AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG : GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTACATCTCTT</gDNA_template>
            <first_frame> A  N  S  T  S  S  A  A  S  I  V  F  S  P  S  Y  G  G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : G  S  R  W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  * :   A  S  S  R  E  N  *  S  P  S  *  V  G  R  V  R  I  R  L  Q  T  H  C  T  H  Q  F  F  W  W  Q  A  R  *  W  S  C  *  C  H  R  K  R  S  Q  E  N  R  *  L  *  I  G  N  H  *  C  N  C  F  S  C  T  F  F  S  H  C  T  W  N  F  P  W  *  I  G  D  *  G  S  Y  *  V  N  *  A  *  G  R  F  A   : G  *  Q  L  G  S  C  *  R  W  S  *  C  *  Y  C  R  F  K  S  S  D  C  V  C  C  G  V  P  W  T  Y  K  E  C  I  N  F  G  N  I  L  V  S  L  T  F  S  *  G  H  Q  R  G  E  V  N  M  L  G  K  L  Y  *  A  Y  C  F  H  K  N  G  R  *  L  L  Q  I  T  C  *  *  G  I  M  N  I  F  F  *  I  R  M  H  F  F  E  L  G  L  P  I  N  F  D  S  L  L  M  Y  V  V  N  E  E  S  K  S  S  I  F  Y  I  S  </first_frame>
            <second_frame>  Q  I  Q  R  L  Q  L  H  P  S  S  S  L  Q  A  M  A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  E  A  D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L   : E  R  Q  V  E  K  I  D  P  L  L  K  W  V  E  S  E  F  G  F  K  P  T  V  H  T  S  F  F  G  G  K  Q  D  D  G  L  V  S  A  I  G  S  V  L  K  K  T  D  D  C  E  L  A  T  I  D  A  I  A  S  A  A  H  S  L  V  I  A  L  G  I  F  R  G  R  L  G  I  E  E  A  I  E  L  I  R  L  E  E  D  L  Q  :  V  D  N  W  G  L  V  E  G  G  H  D  V  D  I  A  D  L  R  V  Q  I  A  S  A  V  V  F  L  G  L  T  R  S  V  *  I  L  V  I  F  *  *  V  L  P  S  V  E  V  T  N  E  V  K  S  I  C  W  V  S  C  I  K  L  I  A  F  T  R  T  G  D  D  C  C  K  *  P  A  D  E  E  *  *  T  Y  F  S  E  F  E  C  T  S  L  N  L  D  Y  P  S  I  L  I  V  Y  *  C  M  L  *  M  K  R  A  N  Q  V  S  F  T  S  L </second_frame>
            <third_frame>   K  F  N  V  F  S  C  I  H  R  L  L  S  K  L  W  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   K  Q  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  :  S  V  K  *  R  K  L  I  P  F  L  S  G  *  S  Q  N  S  A  S  N  P  L  Y  T  P  V  F  L  V  A  S  K  M  M  V  L  L  V  P  S  E  A  F  S  R  K  Q  M  I  V  N  W  Q  P  L  M  Q  L  L  Q  L  H  I  L  *  S  L  H  L  E  F  S  V  V  D  W  G  L  R  K  L  L  S  *  L  G  L  R  K  I  C  R :   L  T  I  G  V  L  L  K  V  V  M  M  L  I  L  Q  I  *  E  F  R  L  R  L  L  W  C  S  L  D  L  Q  G  V  Y  K  F  W  *  Y  F  S  E  S  Y  L  Q  L  R  S  P  T  R  *  S  Q  Y  V  G  *  V  V  L  S  L  L  L  S  Q  E  R  E  M  I  A  A  N  N  L  L  M  R  N  N  E  H  I  F  L  N  S  N  A  L  L  *  T  W  T  T  H  Q  F  *  *  F  I  D  V  C  C  K  *  R  E  Q  I  K  Y  L  L  H  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46451" stop="46954"/>
                    <exon start="47113" stop="47287"/>
                    <exon start="49092" stop="49369"/>
                    <exon start="49541" stop="49648"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1062</number_coding_nucleotides>
                  <number_encoded_amino_acids>354</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIQRLQLHPSSSLQAMAAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQEADGIRPFTMPLMKLSCTALERVPLTRHKIIEYLMKKFPQDLVFCRAPGDNDLTSGVLERQVEKIDPLLKWVESEFGFKPTVHTSFFGGKQDDGLVSAIGSVLKKTDDCELATIDAIASAAHSLVIALGIFRGRLGIEEAIELIRLEEDLQVDNWGLVEGGHDVDIADLRVQIASAVVFLGLTRSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="46457" e_stop="46954"/>
            <exon e_start="47113" e_stop="47413"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46457" e_stop="46954" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46955" i_stop="47112" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="47113" e_stop="47413" e_length="301"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46457" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46476" stop="46954"/>
              <exon start="47113" stop="47245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46481" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46482" stop="46954"/>
              <exon start="47113" stop="47218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46488" stop="46954"/>
              <exon start="47113" stop="47162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46504" stop="46954"/>
              <exon start="47113" stop="47413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46507" stop="46954"/>
              <exon start="47113" stop="47220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACGTCTTCAGCTGCATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : GAAGCAGATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATT</gDNA_template>
            <first_frame> Q  R  L  Q  L  H  P  S  S  S  L  Q  A  M  A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  E  A  D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L  G  M  L  F  C  *  V  *  F  F  L  Y  A  L  N  I  L  L  F  S  *  N  G  F  K  H  V  F  R  S  K  L  S  F  D  I  L  H  L  L  G  N  </first_frame>
            <second_frame>  N  V  F  S  C  I  H  R  L  L  S  K  L  W  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   K  Q  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  V  C  Y  F  A  K  C  N  S  F  Y  M  L  S  T  F  C  F  S  H  K  T  V  S  N  M  S  L  G  A  N  L  V  L  I  S  F  I  C  W  A  I </second_frame>
            <third_frame>   T  S  S  A  A  S  I  V  F  S  P  S  Y  G  G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : G  S  R  W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  W  Y  V  I  L  L  S  V  I  L  F  I  C  S  Q  H  F  A  F  L  I  K  R  F  Q  T  C  L  *  E  Q  T  *  F  *  Y  P  S  F  V  G  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46457" stop="46954"/>
                    <exon start="47113" stop="47304"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRLQLHPSSSLQAMAAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQEADGIRPFTMPLMKLSCTALERVPLTRHKIIEYLMKKFPQDLVFCRAPGDNDLTSGVLGMLFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="46499" e_stop="46954"/>
            <exon e_start="47120" e_stop="47287"/>
            <exon e_start="49092" e_stop="49369"/>
            <exon e_start="49541" e_stop="49905"/>
            <exon e_start="50151" e_stop="50182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.704" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="0.993"/>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.562"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46499" e_stop="46954" e_length="456"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.704">
            <gDNA_intron_boundary i_start="46955" i_stop="47119" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="47120" e_stop="47287" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="47288" i_stop="49091" i_length="1804"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49092" e_stop="49369" e_length="278"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="49370" i_stop="49540" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="49541" e_stop="49905" e_length="365"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49906" i_stop="50150" i_length="245"/>
          </intron>
          <exon e_serial="5" e_score="0.562">
            <gDNA_exon_boundary e_start="50151" e_stop="50182" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46499" stop="46954"/>
              <exon start="47120" stop="47271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47172" stop="47287"/>
              <exon start="49092" stop="49369"/>
              <exon start="49541" stop="49872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49170" stop="49369"/>
              <exon start="49541" stop="49905"/>
              <exon start="50151" stop="50182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243897" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49333" stop="49369"/>
              <exon start="49541" stop="49834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : ATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTG : AGCGTCAAGTAGAGAAAATTGATCCCCTTCTTAAGTGGGTAGAGTCAGAATTCGGCTTCAAACCCACTGTACACACCAGTTTTTTTGGTGGCAAGCAAGATGATGGTCTTGTTAGTGCCATCGGAAGCGTTCTCAAGAAAACAGATGATTGTGAATTGGCAACCATTGATGCAATTGCTTCAGCTGCACATTCTTTAGTCATTGCACTTGGAATTTTCCGTGGTAGATTGGGGATTGAGGAAGCTATTGAGTTAATTAGGCTTGAGGAAGATTTGCAG : GTTGACAATTGGGGTCTTGTTGAAGGTGGTCATGATGTTGATATTGCAGATTTAAGAGTTCAGATTGCGTCTGCTGTGGTGTTCCTTGGACTTACAAGGAGTGTATAAATTTTGGTAATATTTTAGTGAGTCTTACCTTCAGTTGAGGTCACCAACGAGGTGAAGTCAATATGTTGGGTAAGTTGTATTAAGCTTATTGCTTTCACAAGAACGGGAGATGATTGCTGCAAATAACCTGCTGATGAGGAATAATGAACATATTTTTCTGAATTCGAATGCACTTCTTTGAACTTGGACTACCCATCAATTTTGATAGTTTATTGATGTATGTTGTAAATGAAGAGAGCAAATCAAGTATCTTTTAC : TCACCTAATGAGAAAAAAATTAATACTATTTG</gDNA_template>
            <first_frame> A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  :  S  V  K  *  R  K  L  I  P  F  L  S  G  *  S  Q  N  S  A  S  N  P  L  Y  T  P  V  F  L  V  A  S  K  M  M  V  L  L  V  P  S  E  A  F  S  R  K  Q  M  I  V  N  W  Q  P  L  M  Q  L  L  Q  L  H  I  L  *  S  L  H  L  E  F  S  V  V  D  W  G  L  R  K  L  L  S  *  L  G  L  R  K  I  C  R :   L  T  I  G  V  L  L  K  V  V  M  M  L  I  L  Q  I  *  E  F  R  L  R  L  L  W  C  S  L  D  L  Q  G  V  Y  K  F  W  *  Y  F  S  E  S  Y  L  Q  L  R  S  P  T  R  *  S  Q  Y  V  G  *  V  V  L  S  L  L  L  S  Q  E  R  E  M  I  A  A  N  N  L  L  M  R  N  N  E  H  I  F  L  N  S  N  A  L  L  *  T  W  T  T  H  Q  F  *  *  F  I  D  V  C  C  K  *  R  E  Q  I  K  Y  L  L   : L  T  *  *  E  K  N  *  Y  Y  L </first_frame>
            <second_frame>  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  * :   A  S  S  R  E  N  *  S  P  S  *  V  G  R  V  R  I  R  L  Q  T  H  C  T  H  Q  F  F  W  W  Q  A  R  *  W  S  C  *  C  H  R  K  R  S  Q  E  N  R  *  L  *  I  G  N  H  *  C  N  C  F  S  C  T  F  F  S  H  C  T  W  N  F  P  W  *  I  G  D  *  G  S  Y  *  V  N  *  A  *  G  R  F  A   : G  *  Q  L  G  S  C  *  R  W  S  *  C  *  Y  C  R  F  K  S  S  D  C  V  C  C  G  V  P  W  T  Y  K  E  C  I  N  F  G  N  I  L  V  S  L  T  F  S  *  G  H  Q  R  G  E  V  N  M  L  G  K  L  Y  *  A  Y  C  F  H  K  N  G  R  *  L  L  Q  I  T  C  *  *  G  I  M  N  I  F  F  *  I  R  M  H  F  F  E  L  G  L  P  I  N  F  D  S  L  L  M  Y  V  V  N  E  E  S  K  S  S  I  F  Y  :  S  P  N  E  K  K  I  N  T  I   </second_frame>
            <third_frame>   G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L   : E  R  Q  V  E  K  I  D  P  L  L  K  W  V  E  S  E  F  G  F  K  P  T  V  H  T  S  F  F  G  G  K  Q  D  D  G  L  V  S  A  I  G  S  V  L  K  K  T  D  D  C  E  L  A  T  I  D  A  I  A  S  A  A  H  S  L  V  I  A  L  G  I  F  R  G  R  L  G  I  E  E  A  I  E  L  I  R  L  E  E  D  L  Q  :  V  D  N  W  G  L  V  E  G  G  H  D  V  D  I  A  D  L  R  V  Q  I  A  S  A  V  V  F  L  G  L  T  R  S  V  *  I  L  V  I  F  *  *  V  L  P  S  V  E  V  T  N  E  V  K  S  I  C  W  V  S  C  I  K  L  I  A  F  T  R  T  G  D  D  C  C  K  *  P  A  D  E  E  *  *  T  Y  F  S  E  F  E  C  T  S  L  N  L  D  Y  P  S  I  L  I  V  Y  *  C  M  L  *  M  K  R  A  N  Q  V  S  F  T :   H  L  M  R  K  K  L  I  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46942" stop="46954"/>
                    <exon start="47120" stop="47287"/>
                    <exon start="49092" stop="49369"/>
                    <exon start="49541" stop="49648"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGIPDGIRPFTMPLMKLSCTALERVPLTRHKIIEYLMKKFPQDLVFCRAPGDNDLTSGVLERQVEKIDPLLKWVESEFGFKPTVHTSFFGGKQDDGLVSAIGSVLKKTDDCELATIDAIASAAHSLVIALGIFRGRLGIEEAIELIRLEEDLQVDNWGLVEGGHDVDIADLRVQIASAVVFLGLTRSV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46499" stop="46954"/>
                    <exon start="47120" stop="47149"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQMGSGPLLCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="46473" e_stop="46954"/>
            <exon e_start="47120" e_stop="47465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.704" e_score="1.000"/>
          <exon-only e_score="0.954"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46473" e_stop="46954" e_length="482"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.704">
            <gDNA_intron_boundary i_start="46955" i_stop="47119" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="0.954">
            <gDNA_exon_boundary e_start="47120" e_stop="47465" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46473" stop="46954"/>
              <exon start="47120" stop="47465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46499" stop="46954"/>
              <exon start="47120" stop="47271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316141" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCATCGTCTTCTCTCCAAGCTATGGCGGCTGAAATCGTGAGAAGAAGTCTTAAAGCATCAAACTTTTCCCTTCTAAGAAACCTAACCTCTTTGCATACTCGCTGTTTCAGTAACTTGGCTGAATCTGTACAACCGGAATCTGATGTCCCATCTTCCTCATTCACTTTCTCTGAGAATTCGGGCGATGCAGACTCGAATTATCAGAGAAAATCAGCAATCGATGAAAATATCTTCATTAAGGGTCCAAAGAAGGCTTCTTCGTCAAAAGAGGCGGATTCTGTGACGATGCCTATGTCTTTCATGACTGGATCAATTGTGGGAAAGAGGTTTTATCAGAAAGTGACGACTAGAGAAGCTGAAGATGGAAATGGTTGGAGTGTTATGCTTGATTACCGTACGCTTAAAACCCCTTCTAAGCGCCCTCTCAAATGCCCCACTCTCGCTCTTGCTAAGGCTATTGCTGCTGAATGGGAATACCAG : ATGGGATCAGGCCCTTTACTATGCCATTAATGAAACTATCATGTACTGCACTAGAAAGAGTTCCACTGACGCGTCATAAGATAATTGAATATTTGATGAAGAAATTCCCTCAAGATTTAGTATTCTGTCGTGCTCCAGGGGATAATGATCTGACAAGCGGAGTTCTTGGTATGTTATTTTGCTAAGTGTAATTCTTTTTATATGCTCTCAACATTTTGCTTTTCTCATAAAACGGTTTCAAACATGTCTTTAGGAGCAAACTTAGTTTTGATATCCTTCATTTGTTGGGCAATTTATGGTGAACAGGCTTGTTTTTACCAAGTGGCAAAAAGTAGTGGTCTGATAT</gDNA_template>
            <first_frame> I  H  R  L  L  S  K  L  W  R  L  K  S  *  E  E  V  L  K  H  Q  T  F  P  F  *  E  T  *  P  L  C  I  L  A  V  S  V  T  W  L  N  L  Y  N  R  N  L  M  S  H  L  P  H  S  L  S  L  R  I  R  A  M  Q  T  R  I  I  R  E  N  Q  Q  S  M  K  I  S  S  L  R  V  Q  R  R  L  L  R  Q  K  R  R  I  L  *  R  C  L  C  L  S  *  L  D  Q  L  W  E  R  G  F  I  R  K  *  R  L  E  K  L  K  M  E  M  V  G  V  L  C  L  I  T  V  R  L  K  P  L  L  S  A  L  S  N  A  P  L  S  L  L  L  R  L  L  L  L  N  G  N  T  R :   W  D  Q  A  L  Y  Y  A  I  N  E  T  I  M  Y  C  T  R  K  S  S  T  D  A  S  *  D  N  *  I  F  D  E  E  I  P  S  R  F  S  I  L  S  C  S  R  G  *  *  S  D  K  R  S  S  W  Y  V  I  L  L  S  V  I  L  F  I  C  S  Q  H  F  A  F  L  I  K  R  F  Q  T  C  L  *  E  Q  T  *  F  *  Y  P  S  F  V  G  Q  F  M  V  N  R  L  V  F  T  K  W  Q  K  V  V  V  *  Y </first_frame>
            <second_frame>  S  I  V  F  S  P  S  Y  G  G  *  N  R  E  K  K  S  *  S  I  K  L  F  P  S  K  K  P  N  L  F  A  Y  S  L  F  Q  *  L  G  *  I  C  T  T  G  I  *  C  P  I  F  L  I  H  F  L  *  E  F  G  R  C  R  L  E  L  S  E  K  I  S  N  R  *  K  Y  L  H  *  G  S  K  E  G  F  F  V  K  R  G  G  F  C  D  D  A  Y  V  F  H  D  W  I  N  C  G  K  E  V  L  S  E  S  D  D  *  R  S  *  R  W  K  W  L  E  C  Y  A  *  L  P  Y  A  *  N  P  F  *  A  P  S  Q  M  P  H  S  R  S  C  *  G  Y  C  C  *  M  G  I  P   : D  G  I  R  P  F  T  M  P  L  M  K  L  S  C  T  A  L  E  R  V  P  L  T  R  H  K  I  I  E  Y  L  M  K  K  F  P  Q  D  L  V  F  C  R  A  P  G  D  N  D  L  T  S  G  V  L  G  M  L  F  C  *  V  *  F  F  L  Y  A  L  N  I  L  L  F  S  *  N  G  F  K  H  V  F  R  S  K  L  S  F  D  I  L  H  L  L  G  N  L  W  *  T  G  L  F  L  P  S  G  K  K  *  W  S  D   </second_frame>
            <third_frame>   P  S  S  S  L  Q  A  M  A  A  E  I  V  R  R  S  L  K  A  S  N  F  S  L  L  R  N  L  T  S  L  H  T  R  C  F  S  N  L  A  E  S  V  Q  P  E  S  D  V  P  S  S  S  F  T  F  S  E  N  S  G  D  A  D  S  N  Y  Q  R  K  S  A  I  D  E  N  I  F  I  K  G  P  K  K  A  S  S  S  K  E  A  D  S  V  T  M  P  M  S  F  M  T  G  S  I  V  G  K  R  F  Y  Q  K  V  T  T  R  E  A  E  D  G  N  G  W  S  V  M  L  D  Y  R  T  L  K  T  P  S  K  R  P  L  K  C  P  T  L  A  L  A  K  A  I  A  A  E  W  E  Y  Q  :  M  G  S  G  P  L  L  C  H  *  *  N  Y  H  V  L  H  *  K  E  F  H  *  R  V  I  R  *  L  N  I  *  *  R  N  S  L  K  I  *  Y  S  V  V  L  Q  G  I  M  I  *  Q  A  E  F  L  V  C  Y  F  A  K  C  N  S  F  Y  M  L  S  T  F  C  F  S  H  K  T  V  S  N  M  S  L  G  A  N  L  V  L  I  S  F  I  C  W  A  I  Y  G  E  Q  A  C  F  Y  Q  V  A  K  S  S  G  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46475" stop="46954"/>
                    <exon start="47120" stop="47149"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSSSLQAMAAEIVRRSLKASNFSLLRNLTSLHTRCFSNLAESVQPESDVPSSSFTFSENSGDADSNYQRKSAIDENIFIKGPKKASSSKEADSVTMPMSFMTGSIVGKRFYQKVTTREAEDGNGWSVMLDYRTLKTPSKRPLKCPTLALAKAIAAEWEYQMGSGPLLCH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47273" stop="47464"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QAEFLVCYFAKCNSFYMLSTFCFSHKTVSNMSLGANLVLISFICWAIYGEQACFYQVAKSSGLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="50330" PGL_stop="49817"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50330" e_stop="50197"/>
            <exon e_start="50111" e_stop="49817"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50330" e_stop="50197" e_length="134"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.973">
            <gDNA_intron_boundary i_start="50196" i_stop="50112" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="0.976">
            <gDNA_exon_boundary e_start="50111" e_stop="49817" e_length="295"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50330" stop="50197"/>
              <exon start="50111" stop="49817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320448" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGTTGTTAGTAGTAGTTAGCTTTCTAGTTTCTATGGTGATTATTATTAGTACAATTGTTGGAACAAGCACTCGTCTGCCCTTTCTCATAGACTCTAAGACTGTGGAGCCATCTCAATACTTCACAGTAACAG : GGTGTAACAACGACTGTGATATAGCCTGTTGCTATTGTGATGTTACAAAACAACCACCTCTCTGCGTTCAGTGCTGCCGTGAAGAGCGTTGAGCCAAAAACGATAGAAGAAATATATTGGTCAACGAGGGGAACCAACTCTCCTTTAATTATGTTTTTAAATAAGAGATGTTTTTAAATAAGAGACTTAGATTGCATATAAGAGATGTAAAAGATACTTGATTTGCTCTCTTCATTTACAACATACATCAATAAACTATCAAAATTGATGGGTAGTCCAAGTTCAAAGAAGTGCA</gDNA_template>
            <first_frame> E  V  V  S  S  S  *  L  S  S  F  Y  G  D  Y  Y  *  Y  N  C  W  N  K  H  S  S  A  L  S  H  R  L  *  D  C  G  A  I  S  I  L  H  S  N  R :   V  *  Q  R  L  *  Y  S  L  L  L  L  *  C  Y  K  T  T  T  S  L  R  S  V  L  P  *  R  A  L  S  Q  K  R  *  K  K  Y  I  G  Q  R  G  E  P  T  L  L  *  L  C  F  *  I  R  D  V  F  K  *  E  T  *  I  A  Y  K  R  C  K  R  Y  L  I  C  S  L  H  L  Q  H  T  S  I  N  Y  Q  N  *  W  V  V  Q  V  Q  R  S  A </first_frame>
            <second_frame>  K  L  L  V  V  V  S  F  L  V  S  M  V  I  I  I  S  T  I  V  G  T  S  T  R  L  P  F  L  I  D  S  K  T  V  E  P  S  Q  Y  F  T  V  T   : G  C  N  N  D  C  D  I  A  C  C  Y  C  D  V  T  K  Q  P  P  L  C  V  Q  C  C  R  E  E  R  *  A  K  N  D  R  R  N  I  L  V  N  E  G  N  Q  L  S  F  N  Y  V  F  K  *  E  M  F  L  N  K  R  L  R  L  H  I  R  D  V  K  D  T  *  F  A  L  F  I  Y  N  I  H  Q  *  T  I  K  I  D  G  *  S  K  F  K  E  V   </second_frame>
            <third_frame>   S  C  *  *  *  L  A  F  *  F  L  W  *  L  L  L  V  Q  L  L  E  Q  A  L  V  C  P  F  S  *  T  L  R  L  W  S  H  L  N  T  S  Q  *  Q  :  G  V  T  T  T  V  I  *  P  V  A  I  V  M  L  Q  N  N  H  L  S  A  F  S  A  A  V  K  S  V  E  P  K  T  I  E  E  I  Y  W  S  T  R  G  T  N  S  P  L  I  M  F  L  N  K  R  C  F  *  I  R  D  L  D  C  I  *  E  M  *  K  I  L  D  L  L  S  S  F  T  T  Y  I  N  K  L  S  K  L  M  G  S  P  S  S  K  K  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50329" stop="50197"/>
                    <exon start="50111" stop="50020"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLVVVSFLVSMVIIISTIVGTSTRLPFLIDSKTVEPSQYFTVTGCNNDCDIACCYCDVTKQPPLCVQCCREER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="54396" PGL_stop="50695"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54396" e_stop="53334"/>
            <exon e_start="51221" e_stop="50695"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54396" e_stop="53334" e_length="1063"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="53333" i_stop="51222" i_length="2112"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="51221" e_stop="50695" e_length="527"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54396" stop="53835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54047" stop="53479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54043" stop="53334"/>
              <exon start="51221" stop="51065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556175" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54036" stop="53334"/>
              <exon start="51221" stop="50992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54030" stop="53334"/>
              <exon start="51221" stop="51093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719602" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54030" stop="53334"/>
              <exon start="51221" stop="51121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54021" stop="53334"/>
              <exon start="51221" stop="51067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54020" stop="53334"/>
              <exon start="51221" stop="50931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54020" stop="53334"/>
              <exon start="51221" stop="51084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54019" stop="53334"/>
              <exon start="51221" stop="51019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54019" stop="53553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54018" stop="53457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54018" stop="53527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54015" stop="53334"/>
              <exon start="51221" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54015" stop="53334"/>
              <exon start="51221" stop="51016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54015" stop="53334"/>
              <exon start="51221" stop="51018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54014" stop="53602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54014" stop="53713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54012" stop="53334"/>
              <exon start="51221" stop="51144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54011" stop="53416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54011" stop="53643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54010" stop="53334"/>
              <exon start="51221" stop="50981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54010" stop="53512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54010" stop="53555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54008" stop="53334"/>
              <exon start="51221" stop="51130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54008" stop="53522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207779" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54008" stop="53553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54002" stop="53334"/>
              <exon start="51221" stop="51122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54001" stop="53521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54000" stop="53334"/>
              <exon start="51221" stop="50909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54000" stop="53334"/>
              <exon start="51221" stop="51083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53999" stop="53334"/>
              <exon start="51221" stop="50996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53999" stop="53334"/>
              <exon start="51221" stop="51018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53334"/>
              <exon start="51221" stop="50877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53334"/>
              <exon start="51221" stop="51130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53993" stop="53415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53990" stop="53455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53988" stop="53334"/>
              <exon start="51221" stop="51109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53985" stop="53517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53983" stop="53334"/>
              <exon start="51221" stop="51079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53982" stop="53385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53982" stop="53398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441130" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53976" stop="53334"/>
              <exon start="51221" stop="50964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53976" stop="53334"/>
              <exon start="51221" stop="51129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53976" stop="53334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53975" stop="53398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53969" stop="53611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53944" stop="53334"/>
              <exon start="51221" stop="50965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53874" stop="53669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53859" stop="53386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53847" stop="53334"/>
              <exon start="51221" stop="51117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53805" stop="53334"/>
              <exon start="51221" stop="51071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53795" stop="53334"/>
              <exon start="51221" stop="51176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53724" stop="53334"/>
              <exon start="51221" stop="51008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53506" stop="53334"/>
              <exon start="51221" stop="50776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53502" stop="53334"/>
              <exon start="51221" stop="50695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53466" stop="53334"/>
              <exon start="51221" stop="51197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53421" stop="53334"/>
              <exon start="51221" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53419" stop="53334"/>
              <exon start="51221" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51221" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51217" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224626" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51102" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220142" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG : ATGGATCATGGATAGCCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAAGTACATTGCTCCATAATGCCATTAAGGCAGTTTGTGTTTCCTCATAAGTTTTTTTAGCTAATGTGTGTTATTTGAAGGAGTGATTATTTGTTATTCCCTTTGTATGTTGCTTCTCAGCAACATACAGATCTGTGTGGTGTTTAATGATACTCGAGTTTCTTTGAGTCAATTAGTTT</gDNA_template>
            <first_frame> N  N  T  T  P  K  I  L  F  M  Y  F  S  K  N  D  A  E  K  S  E  K  R  L  I  Q  D  A  S  Q  P  R  Y  L  E  I  I  *  R  L  Q  I  R  H  V  I  N  I  R  H  R  S  Q  L  I  H  G  K  A  Y  *  S  T  K  Q  *  I  Q  P  Q  I  F  F  T  C  T  E  L  P  L  P  H  P  P  I  L  K  H  K  T  T  Q  C  R  F  L  L  H  A  Y  F  R  H  L  I  P  I  F  F  F  N  I  K  S  P  S  I  G  F  L  *  *  Q  P  I  Q  S  L  R  F  W  Y  S  F  I  L  Q  W  R  L  V  *  S  D  E  R  F  L  G  F  S  H  Q  H  R  R  R  G  Y  S  S  P  E  L  T  L  P  T  P  K  H  R  R  *  N  L  S  L  I  S  N  H  F  K  F  T  D  G  L  Q  T  T  Q  G  N  L  S  S  K  N  T  K  S  I  *  R  N  A  D  L  W  F  *  M  R  *  S  K  S  R  M  K  L  T  L  H  L  P  S  G  D  P  V  E  K  G  S  V  V  H  V  L  *  T  S  T  D  V  M  D  S  L  V  *  P  R  S  R  R  I  L  N  R  R  L  R  R  C  H  I  C  L  S  L  R  I  W  W  W  I  *  L  I  S  I  I  S  T  S  L  L  S  L  G  L  R  G  R  H  L  H  Q  R  L  G  R  R  Y  H  R  A  R  A  I  G  L  S  W  M  G  C  T  N  V  F  Y  V  L  A  V  A  H  H  V  L  A  T  G  G  I  L  S  L  I  L  V  P  L  H  S  S  M  P  T   : D  G  S  W  I  A  V  M  N  I  L  R  S  A  W  M  Q  L  M  T  N  S  S  F  I  A  A  I  L  F  *  I  V  L  V  L  A  Q  R  D  *  I  P  G  S  I  F  R  T  S  R  S  W  R  W  H  L  E  P  A  V  *  C  V  P  I  F  S  A  K  I  D  F  E  G  L  V  G  G  C  V  P  K  *  C  M  H  R  L  *  F  T  L  *  D  L  F  N  T  *  I  *  D  E  R  C  I  S  L  K  Y  N  T  V  S  I  S  S  T  L  L  H  N  A  I  K  A  V  C  V  S  S  *  V  F  L  A  N  V  C  Y  L  K  E  *  L  F  V  I  P  F  V  C  C  F  S  A  T  Y  R  S  V  W  C  L  M  I  L  E  F  L  *  V  N  *  F </first_frame>
            <second_frame>  I  T  Q  H  R  R  Y  Y  L  C  I  S  V  K  T  M  L  K  K  A  K  S  D  *  S  R  T  R  A  N  H  V  T  *  K  *  S  N  D  Y  K  S  D  T  S  S  I  F  D  T  D  P  N  S  F  T  A  K  L  I  S  R  R  N  N  K  Y  N  L  K  Y  F  S  H  V  P  N  Y  P  F  H  I  H  P  F  S  N  T  K  P  P  N  V  G  F  F  Y  M  P  I  S  V  I  *  Y  Q  Y  F  S  L  I  *  N  P  P  L  L  A  F  S  S  S  N  L  S  N  H  S  V  F  G  I  H  S  F  F  N  G  D  *  F  N  P  T  S  D  F  *  G  S  V  I  S  T  G  G  E  A  T  R  R  Q  S  S  R  F  R  L  P  S  T  E  G  R  I  *  A  *  S  Q  I  I  S  N  L  P  M  D  S  R  Q  P  R  E  T  *  A  Q  R  I  Q  N  R  S  E  G  M  R  T  Y  G  F  R  C  A  N  Q  N  Q  E  *  N  *  P  Y  T  Y  L  Q  E  I  L  *  R  R  D  L  W  F  M  C  Y  E  H  R  R  M  *  W  T  R  L  F  D  Q  D  L  V  G  F  *  I  D  D  Y  A  V  A  T  Y  V  C  H  *  G  S  G  G  G  Y  D  *  F  L  *  S  V  Q  V  Y  *  A  L  A  *  E  E  D  T  C  T  N  A  W  E  G  D  T  T  E  Q  E  R  *  G  *  V  G  W  D  V  R  M  Y  S  M  C  L  L  *  H  I  M  S  *  L  L  V  E  S  *  V  L  S  W  S  R  C  T  P  P  C  Q  P  :  M  D  H  G  *  P  *  *  I  Y  S  G  A  P  G  C  S  *  *  R  I  Q  A  L  S  L  P  Y  Y  S  E  L  F  S  C  L  P  K  G  I  K  S  R  E  A  Y  S  E  H  Q  E  A  G  D  G  T  L  S  L  Q  C  S  V  F  Q  S  F  L  L  R  L  I  L  K  D  *  *  E  V  V  S  Q  N  N  V  C  T  D  C  N  L  L  S  E  I  F  L  I  L  E  F  E  M  K  G  A  S  L  *  N  I  I  Q  Y  Q  F  Q  V  H  C  S  I  M  P  L  R  Q  F  V  F  P  H  K  F  F  *  L  M  C  V  I  *  R  S  D  Y  L  L  F  P  L  Y  V  A  S  Q  Q  H  T  D  L  C  G  V  *  *  Y  S  S  F  F  E  S  I  S   </second_frame>
            <third_frame>   *  H  N  T  E  D  I  I  Y  V  F  Q  *  K  R  C  *  K  K  R  K  A  I  D  P  G  R  E  P  T  T  L  L  R  N  N  L  T  I  T  N  P  T  R  H  Q  Y  S  T  Q  I  P  T  H  S  R  Q  S  L  L  V  D  E  T  I  N  T  T  S  N  I  F  H  M  Y  R  T  T  P  S  T  S  T  H  S  Q  T  Q  N  H  P  M  S  V  S  F  T  C  L  F  P  S  F  N  T  N  I  F  L  *  Y  K  I  P  L  Y  W  L  S  L  V  A  T  Y  P  I  T  P  F  L  V  F  I  H  S  S  M  A  T  S  L  I  R  R  A  I  S  R  V  Q  S  S  A  P  A  A  R  L  L  V  A  R  A  H  A  S  D  S  Q  A  Q  K  V  E  S  K  P  N  L  K  S  F  Q  I  Y  R  W  T  P  D  N  P  G  K  P  E  L  K  E  Y  K  I  D  L  K  E  C  G  P  M  V  L  D  A  L  I  K  I  K  N  E  I  D  P  T  L  T  F  R  R  S  C  R  E  G  I  C  G  S  C  A  M  N  I  D  G  C  N  G  L  A  C  L  T  K  I  S  S  D  S  E  S  T  I  T  P  L  P  H  M  F  V  I  K  D  L  V  V  D  M  T  N  F  Y  N  Q  Y  K  S  I  E  P  W  L  K  R  K  T  P  A  P  T  P  G  K  E  I  P  Q  S  K  S  D  R  A  K  L  D  G  M  Y  E  C  I  L  C  A  C  C  S  T  S  C  P  S  Y  W  W  N  P  E  S  Y  L  G  P  A  A  L  L  H  A  N  R :   W  I  M  D  S  R  D  E  Y  T  Q  E  R  L  D  A  V  N  D  E  F  K  L  Y  R  C  H  T  I  L  N  C  S  R  A  C  P  K  G  L  N  P  G  K  H  I  Q  N  I  K  K  L  E  M  A  P  *  A  C  S  V  V  C  S  N  L  F  C  *  D  *  F  *  R  T  S  R  R  L  C  P  K  I  M  Y  A  Q  I  V  I  Y  S  L  R  S  F  *  Y  L  N  L  R  *  K  V  H  L  S  E  I  *  Y  S  I  N  F  K  Y  I  A  P  *  C  H  *  G  S  L  C  F  L  I  S  F  F  S  *  C  V  L  F  E  G  V  I  I  C  Y  S  L  C  M  L  L  L  S  N  I  Q  I  C  V  V  F  N  D  T  R  V  S  L  S  Q  L  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54064" stop="53334"/>
                    <exon start="51221" stop="51050"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YKIPLYWLSLVATYPITPFLVFIHSSMATSLIRRAISRVQSSAPAARLLVARAHASDSQAQKVESKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTQERLDAVNDEFKLYRCHTILNCSRACPKGLNPGKHIQNIKKLEMAP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54343" stop="54065"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKRKAIDPGREPTTLLRNNLTITNPTRHQYSTQIPTHSRQSLLVDETINTTSNIFHMYRTTPSTSTHSQTQNHPMSVSFTCLFPSFNTNIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="54396" e_stop="53334"/>
            <exon e_start="53184" e_stop="53169"/>
            <exon e_start="53089" e_stop="53085"/>
            <exon e_start="51206" e_stop="50871"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.582" e_score="0.977"/>
          <exon-intron don_prob="0.564" acc_prob="0.880" e_score="0.500"/>
          <exon-intron don_prob="0.000" acc_prob="0.910" e_score="0.800"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="54396" e_stop="53334" e_length="1063"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.582">
            <gDNA_intron_boundary i_start="53333" i_stop="53185" i_length="149"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="53184" e_stop="53169" e_length="16"/>
          </exon>
          <intron i_serial="2" don_prob="0.564" acc_prob="0.880">
            <gDNA_intron_boundary i_start="53168" i_stop="53090" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.800">
            <gDNA_exon_boundary e_start="53089" e_stop="53085" e_length="5"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.910">
            <gDNA_intron_boundary i_start="53084" i_stop="51207" i_length="1878"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="51206" e_stop="50871" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54396" stop="53835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54047" stop="53479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54019" stop="53553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54018" stop="53457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54018" stop="53527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54014" stop="53602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54014" stop="53713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54011" stop="53416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54011" stop="53643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54010" stop="53512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54010" stop="53555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54008" stop="53522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207779" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54008" stop="53553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54001" stop="53521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53998" stop="53582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53993" stop="53415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53990" stop="53455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53985" stop="53517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53982" stop="53385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53982" stop="53398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441130" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53976" stop="53334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53975" stop="53398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53969" stop="53611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53874" stop="53669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53859" stop="53386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53677" stop="53334"/>
              <exon start="53184" stop="53169"/>
              <exon start="53089" stop="53085"/>
              <exon start="51206" stop="50927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250384" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51102" stop="50871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220142" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAACACAACACCGAAGATATTATTTATGTATTTCAGTAAAAACGATGCTGAAAAAAGCGAAAAGCGATTGATCCAGGACGCGAGCCAACCACGTTACTTAGAAATAATCTAACGATTACAAATCCGACACGTCATCAATATTCGACACAGATCCCAACTCATTCACGGCAAAGCTTATTAGTCGACGAAACAATAAATACAACCTCAAATATTTTTCACATGTACCGAACTACCCCTTCCACATCCACCCATTCTCAAACACAAAACCACCCAATGTCGGTTTCTTTTACATGCCTATTTCCGTCATTTAATACCAATATTTTTCTTTAATATAAAATCCCCCTCTATTGGCTTTCTCTAGTAGCAACCTATCCAATCACTCCGTTTTTGGTATTCATTCATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCTTCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCTCAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCAGGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCTGAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCCTTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTATTCTATGTGCTTGCTGTAGCACATCATGTCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCCGCTGCACTCCTCCATGCCAACCG : CTGTGTTGGTGGGGAG : GTTGG : CCGTGATGAATATACTCAGGAGCGCCTGGATGCAGTTAATGACGAATTCAAGCTTTATCGCTGCCATACTATTCTGAATTGTTCTCGTGCTTGCCCAAAGGGATTAAATCCCGGGAAGCATATTCAGAACATCAAGAAGCTGGAGATGGCACCTTGAGCCTGCAGTGTAGTGTGTTCCAATCTTTTCTGCTAAGATTGATTTTGAAGGACTAGTAGGAGGTTGTGTCCCAAAATAATGTATGCACAGATTGTAATTTACTCTCTGAGATCTTTTTAATACTTGAATTTGAGATGAAAGGTGCATCTCTCTGAAATATAATACAGTATCAATTTCAA</gDNA_template>
            <first_frame> N  N  T  T  P  K  I  L  F  M  Y  F  S  K  N  D  A  E  K  S  E  K  R  L  I  Q  D  A  S  Q  P  R  Y  L  E  I  I  *  R  L  Q  I  R  H  V  I  N  I  R  H  R  S  Q  L  I  H  G  K  A  Y  *  S  T  K  Q  *  I  Q  P  Q  I  F  F  T  C  T  E  L  P  L  P  H  P  P  I  L  K  H  K  T  T  Q  C  R  F  L  L  H  A  Y  F  R  H  L  I  P  I  F  F  F  N  I  K  S  P  S  I  G  F  L  *  *  Q  P  I  Q  S  L  R  F  W  Y  S  F  I  L  Q  W  R  L  V  *  S  D  E  R  F  L  G  F  S  H  Q  H  R  R  R  G  Y  S  S  P  E  L  T  L  P  T  P  K  H  R  R  *  N  L  S  L  I  S  N  H  F  K  F  T  D  G  L  Q  T  T  Q  G  N  L  S  S  K  N  T  K  S  I  *  R  N  A  D  L  W  F  *  M  R  *  S  K  S  R  M  K  L  T  L  H  L  P  S  G  D  P  V  E  K  G  S  V  V  H  V  L  *  T  S  T  D  V  M  D  S  L  V  *  P  R  S  R  R  I  L  N  R  R  L  R  R  C  H  I  C  L  S  L  R  I  W  W  W  I  *  L  I  S  I  I  S  T  S  L  L  S  L  G  L  R  G  R  H  L  H  Q  R  L  G  R  R  Y  H  R  A  R  A  I  G  L  S  W  M  G  C  T  N  V  F  Y  V  L  A  V  A  H  H  V  L  A  T  G  G  I  L  S  L  I  L  V  P  L  H  S  S  M  P  T   : A  V  L  V  G  R :   L   : A  V  M  N  I  L  R  S  A  W  M  Q  L  M  T  N  S  S  F  I  A  A  I  L  F  *  I  V  L  V  L  A  Q  R  D  *  I  P  G  S  I  F  R  T  S  R  S  W  R  W  H  L  E  P  A  V  *  C  V  P  I  F  S  A  K  I  D  F  E  G  L  V  G  G  C  V  P  K  *  C  M  H  R  L  *  F  T  L  *  D  L  F  N  T  *  I  *  D  E  R  C  I  S  L  K  Y  N  T  V  S  I  S  </first_frame>
            <second_frame>  I  T  Q  H  R  R  Y  Y  L  C  I  S  V  K  T  M  L  K  K  A  K  S  D  *  S  R  T  R  A  N  H  V  T  *  K  *  S  N  D  Y  K  S  D  T  S  S  I  F  D  T  D  P  N  S  F  T  A  K  L  I  S  R  R  N  N  K  Y  N  L  K  Y  F  S  H  V  P  N  Y  P  F  H  I  H  P  F  S  N  T  K  P  P  N  V  G  F  F  Y  M  P  I  S  V  I  *  Y  Q  Y  F  S  L  I  *  N  P  P  L  L  A  F  S  S  S  N  L  S  N  H  S  V  F  G  I  H  S  F  F  N  G  D  *  F  N  P  T  S  D  F  *  G  S  V  I  S  T  G  G  E  A  T  R  R  Q  S  S  R  F  R  L  P  S  T  E  G  R  I  *  A  *  S  Q  I  I  S  N  L  P  M  D  S  R  Q  P  R  E  T  *  A  Q  R  I  Q  N  R  S  E  G  M  R  T  Y  G  F  R  C  A  N  Q  N  Q  E  *  N  *  P  Y  T  Y  L  Q  E  I  L  *  R  R  D  L  W  F  M  C  Y  E  H  R  R  M  *  W  T  R  L  F  D  Q  D  L  V  G  F  *  I  D  D  Y  A  V  A  T  Y  V  C  H  *  G  S  G  G  G  Y  D  *  F  L  *  S  V  Q  V  Y  *  A  L  A  *  E  E  D  T  C  T  N  A  W  E  G  D  T  T  E  Q  E  R  *  G  *  V  G  W  D  V  R  M  Y  S  M  C  L  L  *  H  I  M  S  *  L  L  V  E  S  *  V  L  S  W  S  R  C  T  P  P  C  Q  P  :  L  C  W  W  G   : G  W  :  P  *  *  I  Y  S  G  A  P  G  C  S  *  *  R  I  Q  A  L  S  L  P  Y  Y  S  E  L  F  S  C  L  P  K  G  I  K  S  R  E  A  Y  S  E  H  Q  E  A  G  D  G  T  L  S  L  Q  C  S  V  F  Q  S  F  L  L  R  L  I  L  K  D  *  *  E  V  V  S  Q  N  N  V  C  T  D  C  N  L  L  S  E  I  F  L  I  L  E  F  E  M  K  G  A  S  L  *  N  I  I  Q  Y  Q  F  Q </second_frame>
            <third_frame>   *  H  N  T  E  D  I  I  Y  V  F  Q  *  K  R  C  *  K  K  R  K  A  I  D  P  G  R  E  P  T  T  L  L  R  N  N  L  T  I  T  N  P  T  R  H  Q  Y  S  T  Q  I  P  T  H  S  R  Q  S  L  L  V  D  E  T  I  N  T  T  S  N  I  F  H  M  Y  R  T  T  P  S  T  S  T  H  S  Q  T  Q  N  H  P  M  S  V  S  F  T  C  L  F  P  S  F  N  T  N  I  F  L  *  Y  K  I  P  L  Y  W  L  S  L  V  A  T  Y  P  I  T  P  F  L  V  F  I  H  S  S  M  A  T  S  L  I  R  R  A  I  S  R  V  Q  S  S  A  P  A  A  R  L  L  V  A  R  A  H  A  S  D  S  Q  A  Q  K  V  E  S  K  P  N  L  K  S  F  Q  I  Y  R  W  T  P  D  N  P  G  K  P  E  L  K  E  Y  K  I  D  L  K  E  C  G  P  M  V  L  D  A  L  I  K  I  K  N  E  I  D  P  T  L  T  F  R  R  S  C  R  E  G  I  C  G  S  C  A  M  N  I  D  G  C  N  G  L  A  C  L  T  K  I  S  S  D  S  E  S  T  I  T  P  L  P  H  M  F  V  I  K  D  L  V  V  D  M  T  N  F  Y  N  Q  Y  K  S  I  E  P  W  L  K  R  K  T  P  A  P  T  P  G  K  E  I  P  Q  S  K  S  D  R  A  K  L  D  G  M  Y  E  C  I  L  C  A  C  C  S  T  S  C  P  S  Y  W  W  N  P  E  S  Y  L  G  P  A  A  L  L  H  A  N  R :   C  V  G  G  E  :  V  G :   R  D  E  Y  T  Q  E  R  L  D  A  V  N  D  E  F  K  L  Y  R  C  H  T  I  L  N  C  S  R  A  C  P  K  G  L  N  P  G  K  H  I  Q  N  I  K  K  L  E  M  A  P  *  A  C  S  V  V  C  S  N  L  F  C  *  D  *  F  *  R  T  S  R  R  L  C  P  K  I  M  Y  A  Q  I  V  I  Y  S  L  R  S  F  *  Y  L  N  L  R  *  K  V  H  L  S  E  I  *  Y  S  I  N  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54064" stop="53334"/>
                    <exon start="53184" stop="53169"/>
                    <exon start="53089" stop="53085"/>
                    <exon start="51206" stop="51050"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>906</number_coding_nucleotides>
                  <number_encoded_amino_acids>302</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YKIPLYWLSLVATYPITPFLVFIHSSMATSLIRRAISRVQSSAPAARLLVARAHASDSQAQKVESKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRCVGGEVGRDEYTQERLDAVNDEFKLYRCHTILNCSRACPKGLNPGKHIQNIKKLEMAP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54343" stop="54065"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKRKAIDPGREPTTLLRNNLTITNPTRHQYSTQIPTHSRQSLLVDETINTTSNIFHMYRTTPSTSTHSQTQNHPMSVSFTCLFPSFNTNIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="50851" PGL_stop="51221"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50851" e_stop="51221"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="50851" e_stop="51221" e_length="371"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50851" stop="51221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412855" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCATTATGGAGCAATGTACTTGAAATTGATACTGTATTATATTTCAGAGAGATGCACCTTTCATCTCAAATTCAAGTATTAAAAAGATCTCAGAGAGTAAATTACAATCTGTGCATACATTATTTTGGGACACAACCTCCTACTAGTCCTTCAAAATCAATCTTAGCAGAAAAGATTGGAACACACTACACTGCAGGCTCAAGGTGCCATCTCCAGCTTCTTGATGTTCTGAATATGCTTCCCGGGATTTAATCCCTTTGGGCAAGCACGAGAACAATTCAGAATAGTATGGCAGCGATAAAGCTTGAATTCGTCATTAACTGCATCCAGGCGCTCCTGAGTATATTCATCACGGCTATCCATGATCCAT</gDNA_template>
            <first_frame> G  I  M  E  Q  C  T  *  N  *  Y  C  I  I  F  Q  R  D  A  P  F  I  S  N  S  S  I  K  K  I  S  E  S  K  L  Q  S  V  H  T  L  F  W  D  T  T  S  Y  *  S  F  K  I  N  L  S  R  K  D  W  N  T  L  H  C  R  L  K  V  P  S  P  A  S  *  C  S  E  Y  A  S  R  D  L  I  P  L  G  K  H  E  N  N  S  E  *  Y  G  S  D  K  A  *  I  R  H  *  L  H  P  G  A  P  E  Y  I  H  H  G  Y  P  *  S   </first_frame>
            <second_frame>  A  L  W  S  N  V  L  E  I  D  T  V  L  Y  F  R  E  M  H  L  S  S  Q  I  Q  V  L  K  R  S  Q  R  V  N  Y  N  L  C  I  H  Y  F  G  T  Q  P  P  T  S  P  S  K  S  I  L  A  E  K  I  G  T  H  Y  T  A  G  S  R  C  H  L  Q  L  L  D  V  L  N  M  L  P  G  I  *  S  L  W  A  S  T  R  T  I  Q  N  S  M  A  A  I  K  L  E  F  V  I  N  C  I  Q  A  L  L  S  I  F  I  T  A  I  H  D  P  </second_frame>
            <third_frame>   H  Y  G  A  M  Y  L  K  L  I  L  Y  Y  I  S  E  R  C  T  F  H  L  K  F  K  Y  *  K  D  L  R  E  *  I  T  I  C  A  Y  I  I  L  G  H  N  L  L  L  V  L  Q  N  Q  S  *  Q  K  R  L  E  H  T  T  L  Q  A  Q  G  A  I  S  S  F  L  M  F  *  I  C  F  P  G  F  N  P  F  G  Q  A  R  E  Q  F  R  I  V  W  Q  R  *  S  L  N  S  S  L  T  A  S  R  R  S  *  V  Y  S  S  R  L  S  M  I  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50852" stop="51103"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALWSNVLEIDTVLYFREMHLSSQIQVLKRSQRVNYNLCIHYFGTQPPTSPSKSILAEKIGTHYTAGSRCHLQLLDVLNMLPGI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="57092" PGL_stop="55530"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57092" e_stop="57032"/>
            <exon e_start="56521" e_stop="56330"/>
            <exon e_start="55789" e_stop="55530"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57092" e_stop="57032" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.969">
            <gDNA_intron_boundary i_start="57031" i_stop="56522" i_length="510"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56521" e_stop="56330" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="56329" i_stop="55790" i_length="540"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="55789" e_stop="55530" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57092" stop="57032"/>
              <exon start="56521" stop="56330"/>
              <exon start="55789" stop="55629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364011" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57080" stop="57032"/>
              <exon start="56521" stop="56330"/>
              <exon start="55789" stop="55530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57080" stop="57032"/>
              <exon start="56521" stop="56330"/>
              <exon start="55789" stop="55530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57079" stop="57032"/>
              <exon start="56521" stop="56330"/>
              <exon start="55789" stop="55763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTCTCTTCTTCTTCCTTTCATCAATTAATTACACCAAAAATATCATATTCATGAATTCC : CAAGAGAAAGGTCGGCCATTGCCGAAATTCGGGGAGTGGGATGTAAATAATCCAGCCTCTGCAGATGGATTCACTGTCATATTTGCTAAGGCTAGAGATGACAAGAAGGCTAATAGCAGTGCAGCACCAACACAAACGCCCAGAAATGACTATGCATATGGACAACCGAACCCTTATCAGCAAGAAACCAGG : AAAAGAAGGTTTTGCTGTTTCTGAAAGCAGGATGTTTCGGTGGCTGTGAATTATGAGACTTTAAGGCCATCGGGAATTGCAGTTCAAGTCTGCCAAGTGGGAGAATGAGTGCTGCACCTTCTGTTTGTATTTTACTCTATTGATTATTTGTTGCATATAAGGTTTTCTTCAACTCTCTCTACTCTCTACTCCCCAATATATGTATGTATGTATTCAGGGGAATCGTCGACCAACACACGCTAATGTATTCTACTTGAAAA</gDNA_template>
            <first_frame> F  S  L  L  L  P  F  I  N  *  L  H  Q  K  Y  H  I  H  E  F   : P  R  E  R  S  A  I  A  E  I  R  G  V  G  C  K  *  S  S  L  C  R  W  I  H  C  H  I  C  *  G  *  R  *  Q  E  G  *  *  Q  C  S  T  N  T  N  A  Q  K  *  L  C  I  W  T  T  E  P  L  S  A  R  N  Q   : E  K  K  V  L  L  F  L  K  A  G  C  F  G  G  C  E  L  *  D  F  K  A  I  G  N  C  S  S  S  L  P  S  G  R  M  S  A  A  P  S  V  C  I  L  L  Y  *  L  F  V  A  Y  K  V  F  F  N  S  L  Y  S  L  L  P  N  I  C  M  Y  V  F  R  G  I  V  D  Q  H  T  L  M  Y  S  T  *  K </first_frame>
            <second_frame>  S  L  F  F  F  L  S  S  I  N  Y  T  K  N  I  I  F  M  N  S  :  Q  E  K  G  R  P  L  P  K  F  G  E  W  D  V  N  N  P  A  S  A  D  G  F  T  V  I  F  A  K  A  R  D  D  K  K  A  N  S  S  A  A  P  T  Q  T  P  R  N  D  Y  A  Y  G  Q  P  N  P  Y  Q  Q  E  T  R  :  K  R  R  F  C  C  F  *  K  Q  D  V  S  V  A  V  N  Y  E  T  L  R  P  S  G  I  A  V  Q  V  C  Q  V  G  E  *  V  L  H  L  L  F  V  F  Y  S  I  D  Y  L  L  H  I  R  F  S  S  T  L  S  T  L  Y  S  P  I  Y  V  C  M  Y  S  G  E  S  S  T  N  T  R  *  C  I  L  L  E   </second_frame>
            <third_frame>   L  S  S  S  S  F  H  Q  L  I  T  P  K  I  S  Y  S  *  I  P :   K  R  K  V  G  H  C  R  N  S  G  S  G  M  *  I  I  Q  P  L  Q  M  D  S  L  S  Y  L  L  R  L  E  M  T  R  R  L  I  A  V  Q  H  Q  H  K  R  P  E  M  T  M  H  M  D  N  R  T  L  I  S  K  K  P  G :   K  E  G  F  A  V  S  E  S  R  M  F  R  W  L  *  I  M  R  L  *  G  H  R  E  L  Q  F  K  S  A  K  W  E  N  E  C  C  T  F  C  L  Y  F  T  L  L  I  I  C  C  I  *  G  F  L  Q  L  S  L  L  S  T  P  Q  Y  M  Y  V  C  I  Q  G  N  R  R  P  T  H  A  N  V  F  Y  L  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57091" stop="57032"/>
                    <exon start="56521" stop="56330"/>
                    <exon start="55789" stop="55766"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFFFLSSINYTKNIIFMNSQEKGRPLPKFGEWDVNNPASADGFTVIFAKARDDKKANSSAAPTQTPRNDYAYGQPNPYQQETRKRRFCCF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56475" stop="56330"/>
                    <exon start="55789" stop="55741"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIQPLQMDSLSYLLRLEMTRRLIAVQHQHKRPEMTMHMDNRTLISKKPGKEGFAVSESRMFRWL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="62371" PGL_stop="64940"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62371" e_stop="63152"/>
            <exon e_start="63710" e_stop="63779"/>
            <exon e_start="64417" e_stop="64940"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62371" e_stop="63152" e_length="782"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="63153" i_stop="63709" i_length="557"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63710" e_stop="63779" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.979">
            <gDNA_intron_boundary i_start="63780" i_stop="64416" i_length="637"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="64417" e_stop="64940" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62371" stop="62869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62376" stop="62911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62381" stop="62874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62384" stop="62869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62396" stop="62966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62396" stop="62868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62449" stop="62979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62483" stop="63011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265604" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62497" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62497" stop="63152"/>
              <exon start="63710" stop="63774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62506" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62517" stop="62980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62522" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="63152"/>
              <exon start="63710" stop="63742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="63152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="63020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="62990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="62978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62523" stop="62916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62537" stop="62865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62559" stop="63064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62560" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62599" stop="63058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62633" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62633" stop="63152"/>
              <exon start="63710" stop="63779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62633" stop="62999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62633" stop="62931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62633" stop="62851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62777" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62777" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62799" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62820" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606390" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62831" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62862" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62862" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62990" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63060" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63115" stop="63152"/>
              <exon start="63710" stop="63779"/>
              <exon start="64417" stop="64892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310743" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAGCTGTGCTGTGCCCATACAAGTGAATTAATAGACTGCTCCAAACCCATCGCGTGTAACACTCCAAGATTCAATCTTTAGATCTATACGCTTCTTTATTTATATATAAAATTATCGTGTTCTCTTGTTTCTGCCACTCAAACATGGAGTCTTGCATCTACCATCAGCTCAAATCCCAGCCTGTATGGCTTCTTTTGCTTCTTTCTTTAGGTTTCTTGAAAGTCTTGTGCTTTTCAGTCATCTTTCTCAAATGGGTCTATGTCAATTTCCTCAGACCTGCTAAGAATCTTAAGAAATATGGGTCATGGGCACTTGTTACTGGACCTACAGATGGTATTGGGAAGGGCTTTGCTTTTGAATTAGCTCGAAAAGGGCTTAATCTAGTTCTTGTGGGTCGTAACCCTGATAAACTTAAGGATGTTTCTGAATCGATTAAAGCTAAATATGGACAGACCCAGATCAAAACAGTCGTCGTTGATTTCTCTGGTGATTTGGATGAAGGGGTTAAGAAGATTAAGGAGACAATTGAAGGATTGGATATTGGGGTTTTGATTAATAATGTTGGGGTTTCGTATCCTTATGCTAGATTTTTCCATGAAGTGGATGATAAGCTGTTGGCAGATTTGATTAAAGTTAATGTGGAAGGGACTACAAAGGTTACTCAAGCTGTTTTGCCTGGTATGATTCAGAGGAAAAGAGGAGCAATTGTTAATATTGGTTCTGGTGCGGCTATTGTTATCCCCTCTGATCCTCTGTATGCTGTTTATGCCGCAACTAAAGC : ATACATTGACCAGTTCTCCAGATGCCTCTATGTAGAGTACAAGAAGAGTGGGATTGATGTGCAATGCCAG : GTGCCGTTATATGTGGCAACAAAAATGGCGTCGATCAAAAGATCTTCATTTTTTGTTCCCTCGACTGATGGTTATGCTCGGGCTGCCCTGCGATGGATTGGTCATGAGCCAAGGTGCACACCTTACTGGCCCCATTCTCTTCTGTGGGGTGTTCTATGTTCATTGCCAGAGTCGATGGTTGATGCTTGGCGTCTGAACTTCTGCATTGGAATTCGAAGGAGAGGGCAGCTGAAGGATTCCAGGAAGAAAGAATAGAAAGCATCTGCTTTACCTCATTCCATATCTTAAAAGTTTGATTAGTAGACAATTAATTTCCGTCTCTATTTCCAATTGGGTAATGCTAGTTACTGTAATGCAACTAGAAGCTTGATTCTGTTCTTACTCATTAAACAAGGCCTAGTGTTATTTTTGCAATTTTAGTTGTAGGCTGATCGAATCAAGAGCGTTCTAAAAGAAATTCCAACTCTTAAGATACTGTTTGTATTTATTCTTTGAGTTTGATGTTGCAGAATGAATTTTCTGTA</gDNA_template>
            <first_frame> P  A  V  L  C  P  Y  K  *  I  N  R  L  L  Q  T  H  R  V  *  H  S  K  I  Q  S  L  D  L  Y  A  S  L  F  I  Y  K  I  I  V  F  S  C  F  C  H  S  N  M  E  S  C  I  Y  H  Q  L  K  S  Q  P  V  W  L  L  L  L  L  S  L  G  F  L  K  V  L  C  F  S  V  I  F  L  K  W  V  Y  V  N  F  L  R  P  A  K  N  L  K  K  Y  G  S  W  A  L  V  T  G  P  T  D  G  I  G  K  G  F  A  F  E  L  A  R  K  G  L  N  L  V  L  V  G  R  N  P  D  K  L  K  D  V  S  E  S  I  K  A  K  Y  G  Q  T  Q  I  K  T  V  V  V  D  F  S  G  D  L  D  E  G  V  K  K  I  K  E  T  I  E  G  L  D  I  G  V  L  I  N  N  V  G  V  S  Y  P  Y  A  R  F  F  H  E  V  D  D  K  L  L  A  D  L  I  K  V  N  V  E  G  T  T  K  V  T  Q  A  V  L  P  G  M  I  Q  R  K  R  G  A  I  V  N  I  G  S  G  A  A  I  V  I  P  S  D  P  L  Y  A  V  Y  A  A  T  K  A :   Y  I  D  Q  F  S  R  C  L  Y  V  E  Y  K  K  S  G  I  D  V  Q  C  Q  :  V  P  L  Y  V  A  T  K  M  A  S  I  K  R  S  S  F  F  V  P  S  T  D  G  Y  A  R  A  A  L  R  W  I  G  H  E  P  R  C  T  P  Y  W  P  H  S  L  L  W  G  V  L  C  S  L  P  E  S  M  V  D  A  W  R  L  N  F  C  I  G  I  R  R  R  G  Q  L  K  D  S  R  K  K  E  *  K  A  S  A  L  P  H  S  I  S  *  K  F  D  *  *  T  I  N  F  R  L  Y  F  Q  L  G  N  A  S  Y  C  N  A  T  R  S  L  I  L  F  L  L  I  K  Q  G  L  V  L  F  L  Q  F  *  L  *  A  D  R  I  K  S  V  L  K  E  I  P  T  L  K  I  L  F  V  F  I  L  *  V  *  C  C  R  M  N  F  L   </first_frame>
            <second_frame>  Q  L  C  C  A  H  T  S  E  L  I  D  C  S  K  P  I  A  C  N  T  P  R  F  N  L  *  I  Y  T  L  L  Y  L  Y  I  K  L  S  C  S  L  V  S  A  T  Q  T  W  S  L  A  S  T  I  S  S  N  P  S  L  Y  G  F  F  C  F  F  L  *  V  S  *  K  S  C  A  F  Q  S  S  F  S  N  G  S  M  S  I  S  S  D  L  L  R  I  L  R  N  M  G  H  G  H  L  L  L  D  L  Q  M  V  L  G  R  A  L  L  L  N  *  L  E  K  G  L  I  *  F  L  W  V  V  T  L  I  N  L  R  M  F  L  N  R  L  K  L  N  M  D  R  P  R  S  K  Q  S  S  L  I  S  L  V  I  W  M  K  G  L  R  R  L  R  R  Q  L  K  D  W  I  L  G  F  *  L  I  M  L  G  F  R  I  L  M  L  D  F  S  M  K  W  M  I  S  C  W  Q  I  *  L  K  L  M  W  K  G  L  Q  R  L  L  K  L  F  C  L  V  *  F  R  G  K  E  E  Q  L  L  I  L  V  L  V  R  L  L  L  S  P  L  I  L  C  M  L  F  M  P  Q  L  K   : H  T  L  T  S  S  P  D  A  S  M  *  S  T  R  R  V  G  L  M  C  N  A  R :   C  R  Y  M  W  Q  Q  K  W  R  R  S  K  D  L  H  F  L  F  P  R  L  M  V  M  L  G  L  P  C  D  G  L  V  M  S  Q  G  A  H  L  T  G  P  I  L  F  C  G  V  F  Y  V  H  C  Q  S  R  W  L  M  L  G  V  *  T  S  A  L  E  F  E  G  E  G  S  *  R  I  P  G  R  K  N  R  K  H  L  L  Y  L  I  P  Y  L  K  S  L  I  S  R  Q  L  I  S  V  S  I  S  N  W  V  M  L  V  T  V  M  Q  L  E  A  *  F  C  S  Y  S  L  N  K  A  *  C  Y  F  C  N  F  S  C  R  L  I  E  S  R  A  F  *  K  K  F  Q  L  L  R  Y  C  L  Y  L  F  F  E  F  D  V  A  E  *  I  F  C  </second_frame>
            <third_frame>   S  C  A  V  P  I  Q  V  N  *  *  T  A  P  N  P  S  R  V  T  L  Q  D  S  I  F  R  S  I  R  F  F  I  Y  I  *  N  Y  R  V  L  L  F  L  P  L  K  H  G  V  L  H  L  P  S  A  Q  I  P  A  C  M  A  S  F  A  S  F  F  R  F  L  E  S  L  V  L  F  S  H  L  S  Q  M  G  L  C  Q  F  P  Q  T  C  *  E  S  *  E  I  W  V  M  G  T  C  Y  W  T  Y  R  W  Y  W  E  G  L  C  F  *  I  S  S  K  R  A  *  S  S  S  C  G  S  *  P  *  *  T  *  G  C  F  *  I  D  *  S  *  I  W  T  D  P  D  Q  N  S  R  R  *  F  L  W  *  F  G  *  R  G  *  E  D  *  G  D  N  *  R  I  G  Y  W  G  F  D  *  *  C  W  G  F  V  S  L  C  *  I  F  P  *  S  G  *  *  A  V  G  R  F  D  *  S  *  C  G  R  D  Y  K  G  Y  S  S  C  F  A  W  Y  D  S  E  E  K  R  S  N  C  *  Y  W  F  W  C  G  Y  C  Y  P  L  *  S  S  V  C  C  L  C  R  N  *  S  :  I  H  *  P  V  L  Q  M  P  L  C  R  V  Q  E  E  W  D  *  C  A  M  P   : G  A  V  I  C  G  N  K  N  G  V  D  Q  K  I  F  I  F  C  S  L  D  *  W  L  C  S  G  C  P  A  M  D  W  S  *  A  K  V  H  T  L  L  A  P  F  S  S  V  G  C  S  M  F  I  A  R  V  D  G  *  C  L  A  S  E  L  L  H  W  N  S  K  E  R  A  A  E  G  F  Q  E  E  R  I  E  S  I  C  F  T  S  F  H  I  L  K  V  *  L  V  D  N  *  F  P  S  L  F  P  I  G  *  C  *  L  L  *  C  N  *  K  L  D  S  V  L  T  H  *  T  R  P  S  V  I  F  A  I  L  V  V  G  *  S  N  Q  E  R  S  K  R  N  S  N  S  *  D  T  V  C  I  Y  S  L  S  L  M  L  Q  N  E  F  S  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62431" stop="63152"/>
                    <exon start="63710" stop="63779"/>
                    <exon start="64417" stop="64671"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSKIQSLDLYASLFIYKIIVFSCFCHSNMESCIYHQLKSQPVWLLLLLSLGFLKVLCFSVIFLKWVYVNFLRPAKNLKKYGSWALVTGPTDGIGKGFAFELARKGLNLVLVGRNPDKLKDVSESIKAKYGQTQIKTVVVDFSGDLDEGVKKIKETIEGLDIGVLINNVGVSYPYARFFHEVDDKLLADLIKVNVEGTTKVTQAVLPGMIQRKRGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDGYARAALRWIGHEPRCTPYWPHSLLWGVLCSLPESMVDAWRLNFCIGIRRRGQLKDSRKKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="62885" PGL_stop="62529"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62885" e_stop="62529"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="62885" e_stop="62529" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62885" stop="62529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62837" stop="62529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277239" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTTCTTAACCCCTTCATCCAAATCACCAGAGAAATCAACGACGACTGTTTTGATCTGGGTCTGTCCATATTTAGCTTTAATCGATTCAGAAACATCCTTAAGTTTATCAGGGTTACGACCCACAAGAACTAGATTAAGCCCTTTTCGAGCTAATTCAAAAGCAAAGCCCTTCCCAATACCATCTGTAGGTCCAGTAACAAGTGCCCATGACCCATATTTCTTAAGATTCTTAGCAGGTCTGAGGAAATTGACATAGACCCATTTGAGAAAGATGACTGAAAAGCACAAGACTTTCAAGAAACCTAAAGAAAGAAGCAAAAGAAGCCATACAGGCTGGGATTTGAGCTGATGGTAG</gDNA_template>
            <first_frame> I  F  L  T  P  S  S  K  S  P  E  K  S  T  T  T  V  L  I  W  V  C  P  Y  L  A  L  I  D  S  E  T  S  L  S  L  S  G  L  R  P  T  R  T  R  L  S  P  F  R  A  N  S  K  A  K  P  F  P  I  P  S  V  G  P  V  T  S  A  H  D  P  Y  F  L  R  F  L  A  G  L  R  K  L  T  *  T  H  L  R  K  M  T  E  K  H  K  T  F  K  K  P  K  E  R  S  K  R  S  H  T  G  W  D  L  S  *  W  * </first_frame>
            <second_frame>  S  S  *  P  L  H  P  N  H  Q  R  N  Q  R  R  L  F  *  S  G  S  V  H  I  *  L  *  S  I  Q  K  H  P  *  V  Y  Q  G  Y  D  P  Q  E  L  D  *  A  L  F  E  L  I  Q  K  Q  S  P  S  Q  Y  H  L  *  V  Q  *  Q  V  P  M  T  H  I  S  *  D  S  *  Q  V  *  G  N  *  H  R  P  I  *  E  R  *  L  K  S  T  R  L  S  R  N  L  K  K  E  A  K  E  A  I  Q  A  G  I  *  A  D  G   </second_frame>
            <third_frame>   L  L  N  P  F  I  Q  I  T  R  E  I  N  D  D  C  F  D  L  G  L  S  I  F  S  F  N  R  F  R  N  I  L  K  F  I  R  V  T  T  H  K  N  *  I  K  P  F  S  S  *  F  K  S  K  A  L  P  N  T  I  C  R  S  S  N  K  C  P  *  P  I  F  L  K  I  L  S  R  S  E  E  I  D  I  D  P  F  E  K  D  D  *  K  A  Q  D  F  Q  E  T  *  R  K  K  Q  K  K  P  Y  R  L  G  F  E  L  M  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62885" stop="62628"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLTPSSKSPEKSTTTVLIWVCPYLALIDSETSLSLSGLRPTRTRLSPFRANSKAKPFPIPSVGPVTSAHDPYFLRFLAGLRKLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="69372" PGL_stop="65138"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69282" e_stop="69072"/>
            <exon e_start="68804" e_stop="68696"/>
            <exon e_start="68616" e_stop="68424"/>
            <exon e_start="68329" e_stop="68193"/>
            <exon e_start="67047" e_stop="66759"/>
            <exon e_start="66650" e_stop="66544"/>
            <exon e_start="66435" e_stop="66300"/>
            <exon e_start="66205" e_stop="66007"/>
            <exon e_start="65920" e_stop="65677"/>
            <exon e_start="65591" e_stop="65138"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.959" e_score="0.953"/>
          <exon-intron don_prob="0.841" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.859" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.556" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.699" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.757" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="69282" e_stop="69072" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.959">
            <gDNA_intron_boundary i_start="69071" i_stop="68805" i_length="267"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68804" e_stop="68696" e_length="109"/>
          </exon>
          <intron i_serial="2" don_prob="0.841" acc_prob="0.973">
            <gDNA_intron_boundary i_start="68695" i_stop="68617" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68616" e_stop="68424" e_length="193"/>
          </exon>
          <intron i_serial="3" don_prob="0.924" acc_prob="0.989">
            <gDNA_intron_boundary i_start="68423" i_stop="68330" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68329" e_stop="68193" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.859" acc_prob="0.990">
            <gDNA_intron_boundary i_start="68192" i_stop="67048" i_length="1145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67047" e_stop="66759" e_length="289"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.556">
            <gDNA_intron_boundary i_start="66758" i_stop="66651" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66650" e_stop="66544" e_length="107"/>
          </exon>
          <intron i_serial="6" don_prob="0.887" acc_prob="0.999">
            <gDNA_intron_boundary i_start="66543" i_stop="66436" i_length="108"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="66435" e_stop="66300" e_length="136"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.699">
            <gDNA_intron_boundary i_start="66299" i_stop="66206" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="66205" e_stop="66007" e_length="199"/>
          </exon>
          <intron i_serial="8" don_prob="0.802" acc_prob="0.985">
            <gDNA_intron_boundary i_start="66006" i_stop="65921" i_length="86"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="65920" e_stop="65677" e_length="244"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.757">
            <gDNA_intron_boundary i_start="65676" i_stop="65592" i_length="85"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="65591" e_stop="65138" e_length="454"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69282" stop="69072"/>
              <exon start="68804" stop="68696"/>
              <exon start="68616" stop="68424"/>
              <exon start="68329" stop="68316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69205" stop="69072"/>
              <exon start="68804" stop="68696"/>
              <exon start="68616" stop="68424"/>
              <exon start="68329" stop="68193"/>
              <exon start="67047" stop="66856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346921" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69079" stop="69072"/>
              <exon start="68804" stop="68696"/>
              <exon start="68616" stop="68424"/>
              <exon start="68329" stop="68193"/>
              <exon start="67047" stop="66811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68598" stop="68424"/>
              <exon start="68329" stop="68202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68537" stop="68424"/>
              <exon start="68329" stop="68193"/>
              <exon start="67047" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322276" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68254" stop="68193"/>
              <exon start="67047" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68229" stop="68193"/>
              <exon start="67047" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66984" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66983" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66979" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66884" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66790" stop="66759"/>
              <exon start="66650" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66631" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66617" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66594" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66578" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66557" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66554" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66553" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66551" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66551" stop="66544"/>
              <exon start="66435" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66423" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66345" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66338" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66337" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66314" stop="66300"/>
              <exon start="66205" stop="66007"/>
              <exon start="65920" stop="65711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66063" stop="66007"/>
              <exon start="65920" stop="65677"/>
              <exon start="65591" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65881" stop="65677"/>
              <exon start="65591" stop="65155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65881" stop="65677"/>
              <exon start="65591" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65880" stop="65677"/>
              <exon start="65591" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65710" stop="65677"/>
              <exon start="65591" stop="65138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65591" stop="65317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65591" stop="65317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436032" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65541" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65495" stop="65155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65495" stop="65156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65458" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAG : GTGTCATTGTGTTCCCTATCGTCCTTATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTCTATACATTTTACTGTATATGGAG : CACAAAGCAACTAGGTCCAGCTTTAAAATTTTTAGTAGGCATATGTGCCCTTGTTATTTTATATTTATGGCCCTTCATTGGAATTGCAACTAGCATTATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCAGTGGATGGAAGGGCGACTAATGCCTTCTATCACAGTATATAT : GATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAG : GGTGCTTTATATTCCTTTGGCGCTATTAGCTGTGGAACTAGGACTCGTGGTTGATATGCCAATGATCATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTGTAAAGGGGTGGCGTCGTTTATTTCAAGATTGTATAGGCCGAGAAGGGCCTTTTCTAGAGTCAATCTGTGTACCATTTGCTGGCCTTGCTATCTTACTCTGGCCATTGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCAAGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAG : GAGTGTTCTCTTTGGGCAGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGATGAATATAGCAATGATGTGCTAGACATGCCAGAAGGGTCCTGCTTTCCTAG : GCCTCAGTACAGAAAGAAGACTGCATCAAGTACCAACTCCCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAGAAATCCACCATCTAGTACAAACGCCATCAATGTCCCCATACTCGAGTTGAAGCCCCTCGAG : CTTCTTGATGGCTTATTCAAGGGCTGTCAACGTCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACATTCTGCTAAAGCCAACAGTGCTGGTATTTTGTTAA : ATGATGACACCACTGAAATAACTAGCACAAACAGGCCTAGAGATACCTTCGCGGAGTGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGGAAATCTTTCTGACAGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCAGAGAGGTTGAGGGACCTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGTTTGAGGCGTTAGCTCGAAG : GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCCTCTGAACTTAGATAAAA</gDNA_template>
            <first_frame> Q  N  P  R  F  F  G  C  I  F  Q  D  *  L  I  C  E  K  G  L  Y  L  V  S  D  C  V  K  I  E  W  F  L  I  *  R  S  I  R  M  E  P  P  R  G  V  F  D  S  V  W  N  F  I  R  F  L  P  Y  F  I  S  L  L  I  L  G  V  L  K   : G  V  I  V  F  P  I  V  L  I  I  L  T  V  G  N  C  S  L  I  L  G  L  W  P  V  H  L  F  Y  T  F  Y  C  I  W  S :   T  K  Q  L  G  P  A  L  K  F  L  V  G  I  C  A  L  V  I  L  Y  L  W  P  F  I  G  I  A  T  S  I  I  G  G  A  A  Y  G  F  L  S  P  V  F  A  T  F  Q  A  V  D  G  R  A  T  N  A  F  Y  H  S  I  Y  :  D  G  T  W  D  T  V  K  G  S  L  T  I  V  R  D  L  K  D  V  L  Y  H  S  Y  F  S  I  M  D  D  F  R  L  Q  E  P  P  D  G  K  C  Y  E  I  R :   V  L  Y  I  P  L  A  L  L  A  V  E  L  G  L  V  V  D  M  P  M  I  M  L  I  A  A  C  K  F  P  Y  M  L  V  K  G  W  R  R  L  F  Q  D  C  I  G  R  E  G  P  F  L  E  S  I  C  V  P  F  A  G  L  A  I  L  L  W  P  L  A  V  I  A  A  F  F  G  S  I  L  A  S  V  P  L  G  A  Y  A  G  V  V  V  Y  Q  :  E  C  S  L  W  A  G  L  C  Y  I  V  A  S  L  S  I  Y  D  E  Y  S  N  D  V  L  D  M  P  E  G  S  C  F  P  R :   P  Q  Y  R  K  K  T  A  S  S  T  N  S  R  A  D  S  L  S  R  P  D  S  F  R  N  P  P  S  S  T  N  A  I  N  V  P  I  L  E  L  K  P  L  E  :  L  L  D  G  L  F  K  G  C  Q  R  H  G  E  I  M  V  S  Q  G  V  I  T  Q  K  D  I  E  D  A  K  S  S  K  D  S  G  Q  V  I  S  I  G  L  P  A  Y  C  I  L  Q  T  L  I  H  S  A  K  A  N  S  A  G  I  L  L   : N  D  D  T  T  E  I  T  S  T  N  R  P  R  D  T  F  A  E  W  F  F  N  P  L  L  I  I  K  D  Q  I  K  A  G  N  L  S  D  S  D  E  E  Y  L  G  K  L  V  L  L  S  G  D  P  E  R  L  R  D  L  N  I  G  S  P  P  E  S  E  L  R  R  A  E  F  E  A  L  A  R  R :   L  R  G  I  T  K  S  I  S  R  F  P  T  F  K  R  R  F  E  S  S  I  K  V  I  L  E  E  L  A  K  K  N  G  D  S  R  K  S  E  D  A  G  R  T  P  R  S  K  S  M  F  V  R  M  F  S  E  K  S  F  K  N  R  N  G  K  S  D  Q  E  A  Q  L  V  D  T  D  R  D  V  E  I  Q  *  *  D  P  H  E  F  Y  P  L  A  C  F  A  *  S  V  C  A  L  S  V  N  R  F  R  L  K  T  I  L  K  A  F  I  S  S  S  C  *  *  *  I  L  Y  F  L  D  K  V  Y  E  Y  V  H  Q  F  I  K  Y  F  L  *  T  *  I  K </first_frame>
            <second_frame>  K  I  R  D  F  L  V  A  F  S  K  I  N  *  F  V  K  R  G  C  T  L  L  V  I  V  *  R  S  S  G  S  *  F  S  E  A  *  E  W  N  L  Q  G  G  F  L  I  R  C  G  T  S  F  V  S  Y  L  T  S  L  A  C  L  F  W  V  S  *  K  :  V  S  L  C  S  L  S  S  L  L  Y  S  L  S  E  T  V  P  L  F  W  V  F  G  Q  C  T  C  S  I  H  F  T  V  Y  G   : A  Q  S  N  *  V  Q  L  *  N  F  *  *  A  Y  V  P  L  L  F  Y  I  Y  G  P  S  L  E  L  Q  L  A  L  L  A  G  L  L  M  A  S  F  H  Q  C  L  P  L  S  K  Q  W  M  E  G  R  L  M  P  S  I  T  V  Y  M :   M  G  P  G  T  Q  *  K  E  A  *  P  L  L  G  I  *  R  M  S  Y  T  I  P  I  S  Q  S  W  M  I  S  D  F  K  N  L  L  M  E  N  A  T  R  S   : G  C  F  I  F  L  W  R  Y  *  L  W  N  *  D  S  W  L  I  C  Q  *  S  C  *  L  L  L  A  N  S  L  T  C  L  *  R  G  G  V  V  Y  F  K  I  V  *  A  E  K  G  L  F  *  S  Q  S  V  Y  H  L  L  A  L  L  S  Y  S  G  H  W  L  L  L  L  H  S  L  D  Q  Y  *  Q  V  S  L  *  A  L  M  Q  E  *  L  Y  I  R :   S  V  L  F  G  Q  G  F  A  I  S  L  L  P  C  P  Y  M  M  N  I  A  M  M  C  *  T  C  Q  K  G  P  A  F  L   : G  L  S  T  E  R  R  L  H  Q  V  P  T  P  V  Q  I  L  Y  Q  G  L  I  L  S  E  I  H  H  L  V  Q  T  P  S  M  S  P  Y  S  S  *  S  P  S  S :   F  L  M  A  Y  S  R  A  V  N  V  M  A  K  S  W  Y  L  K  E  *  L  H  K  K  T  L  K  M  P  N  L  V  K  T  V  V  K  S  L  A  L  V  C  L  P  I  A  S  F  R  P  L  Y  I  L  L  K  P  T  V  L  V  F  C  *  :  M  M  T  P  L  K  *  L  A  Q  T  G  L  E  I  P  S  R  S  G  F  S  I  H  S  *  S  S  K  T  R  S  K  P  E  I  F  L  T  A  T  R  S  T  L  A  N  W  F  C  *  V  V  I  Q  R  G  *  G  T  *  I  L  D  H  H  L  N  L  N  *  G  E  L  S  L  R  R  *  L  E   : G  Y  E  A  S  P  N  L  Y  Q  D  F  Q  H  S  S  A  A  L  R  V  A  S  R  L  S  *  K  N  W  P  R  R  M  V  I  V  E  N  Q  K  M  L  E  E  L  P  G  Q  K  A  C  L  F  V  C  L  A  R  N  L  S  R  I  E  M  A  R  V  I  K  R  L  N  W  *  I  L  I  E  M  L  K  F  N  D  K  I  R  M  N  S  I  H  *  H  A  L  L  N  L  S  V  H  F  Q  S  T  G  L  D  *  R  L  F  *  K  L  L  L  V  L  P  A  S  N  E  F  Y  I  S  W  T  K  F  M  N  M  C  I  S  S  S  N  I  S  S  E  L  R  *   </second_frame>
            <third_frame>   K  S  E  I  F  W  L  H  F  P  R  L  I  D  L  *  K  G  V  V  P  C  *  *  L  C  K  D  R  V  V  L  D  L  A  K  H  K  N  G  T  S  K  G  G  F  *  F  G  V  E  L  H  S  F  L  T  L  L  H  *  P  A  Y  F  G  C  L  E  R :   C  H  C  V  P  Y  R  P  Y  Y  T  H  C  R  K  L  F  P  Y  F  G  S  L  A  S  A  P  V  L  Y  I  L  L  Y  M  E  :  H  K  A  T  R  S  S  F  K  I  F  S  R  H  M  C  P  C  Y  F  I  F  M  A  L  H  W  N  C  N  *  H  Y  W  R  G  C  L  W  L  P  F  T  S  V  C  H  F  P  S  S  G  W  K  G  D  *  C  L  L  S  Q  Y  I   : *  W  D  L  G  H  S  E  R  K  L  D  H  C  *  G  F  E  G  C  L  I  P  F  L  F  L  N  H  G  *  F  P  T  S  R  T  S  *  W  K  M  L  R  D  Q  :  G  A  L  Y  S  F  G  A  I  S  C  G  T  R  T  R  G  *  Y  A  N  D  H  A  N  C  C  L  Q  I  P  L  H  A  C  K  G  V  A  S  F  I  S  R  L  Y  R  P  R  R  A  F  S  R  V  N  L  C  T  I  C  W  P  C  Y  L  T  L  A  I  G  C  Y  C  C  I  L  W  I  N  I  S  K  C  P  S  R  R  L  C  R  S  S  C  I  S   : G  V  F  S  L  G  R  A  L  L  Y  R  C  F  L  V  H  I  *  *  I  *  Q  *  C  A  R  H  A  R  R  V  L  L  S  *  :  A  S  V  Q  K  E  D  C  I  K  Y  Q  L  P  C  R  F  F  I  K  A  *  F  F  Q  K  S  T  I  *  Y  K  R  H  Q  C  P  H  T  R  V  E  A  P  R   : A  S  *  W  L  I  Q  G  L  S  T  S  W  R  N  H  G  I  S  R  S  N  Y  T  K  R  H  *  R  C  Q  I  *  *  R  Q  W  S  S  H  *  H  W  F  A  C  L  L  H  P  S  D  P  Y  T  F  C  *  S  Q  Q  C  W  Y  F  V  K :   *  *  H  H  *  N  N  *  H  K  Q  A  *  R  Y  L  R  G  V  V  F  Q  S  T  L  D  H  Q  R  P  D  Q  S  R  K  S  F  *  Q  R  R  G  V  P  W  Q  I  G  F  V  E  W  *  S  R  E  V  E  G  P  K  Y  W  I  T  T  *  I  *  T  E  A  S  *  V  *  G  V  S  S  K  :  A  T  R  H  H  Q  I  Y  I  K  I  S  N  I  Q  A  P  L  *  E  *  H  Q  G  Y  L  R  R  T  G  Q  E  E  W  *  *  *  K  I  R  R  C  W  K  N  S  Q  V  K  K  H  V  C  S  Y  V  *  R  E  I  F  Q  E  *  K  W  Q  E  *  S  R  G  S  T  G  R  Y  *  *  R  C  *  N  S  M  I  R  S  A  *  I  L  S  T  S  M  L  C  L  I  C  L  C  T  F  S  Q  Q  V  *  I  E  D  Y  F  E  S  F  Y  *  F  F  L  L  V  M  N  F  I  F  L  G  Q  S  L  *  I  C  A  S  V  H  Q  I  F  P  L  N  L  D  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69177" stop="69072"/>
                    <exon start="68804" stop="68696"/>
                    <exon start="68616" stop="68424"/>
                    <exon start="68329" stop="68193"/>
                    <exon start="67047" stop="66759"/>
                    <exon start="66650" stop="66544"/>
                    <exon start="66435" stop="66300"/>
                    <exon start="66205" stop="66007"/>
                    <exon start="65920" stop="65677"/>
                    <exon start="65591" stop="65336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1773</number_coding_nucleotides>
                  <number_encoded_amino_acids>591</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSIRMEPPRGVFDSVWNFIRFLPYFISLLILGVLKGVIVFPIVLIILTVGNCSLILGLWPVHLFYTFYCIWSTKQLGPALKFLVGICALVILYLWPFIGIATSIIGGAAYGFLSPVFATFQAVDGRATNAFYHSIYDGTWDTVKGSLTIVRDLKDVLYHSYFSIMDDFRLQEPPDGKCYEIRVLYIPLALLAVELGLVVDMPMIMLIAACKFPYMLVKGWRRLFQDCIGREGPFLESICVPFAGLAILLWPLAVIAAFFGSILASVPLGAYAGVVVYQECSLWAGLCYIVASLSIYDEYSNDVLDMPEGSCFPRPQYRKKTASSTNSRADSLSRPDSFRNPPSSTNAINVPILELKPLELLDGLFKGCQRHGEIMVSQGVITQKDIEDAKSSKDSGQVISIGLPAYCILQTLIHSAKANSAGILLNDDTTEITSTNRPRDTFAEWFFNPLLIIKDQIKAGNLSDSDEEYLGKLVLLSGDPERLRDLNIGSPPESELRRAEFEALARRLRGITKSISRFPTFKRRFESSIKVILEELAKKNGDSRKSEDAGRTPRSKSMFVRMFSEKSFKNRNGKSDQEAQLVDTDRDVEIQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="65687" e_stop="65685"/>
            <exon e_start="65591" e_stop="65155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.757" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65687" e_stop="65685" e_length="3"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.757">
            <gDNA_intron_boundary i_start="65684" i_stop="65592" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="65591" e_stop="65155" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65687" stop="65685"/>
              <exon start="65591" stop="65317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65591" stop="65317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65591" stop="65317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436032" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65541" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65495" stop="65155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303629" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65495" stop="65156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65458" stop="65163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTA : GCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGCTTTGAGAGTAGCATCAAGGTTATCTTAGAAGAACTGGCCAAGAAGAATGGTGATAGTAGAAAATCAGAAGATGCTGGAAGAACTCCCAGGTCAAAAAGCATGTTTGTTCGTATGTTTAGCGAGAAATCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTAGATACTGATAGAGATGTTGAAATTCAATGATAAGATCCGCATGAATTCTATCCACTAGCATGCTTTGCTTAATCTGTCTGTGCACTTTCAGTCAACAGGTTTAGATTGAAGACTATTTTGAAAGCTTTTATTAGTTCTTCCTGCTAGTAATGAATTTTATATTTCTTGGACAAAGTTTATGAATATGTGCATCAGTTCATCAAATATTTCC</gDNA_template>
            <first_frame> L  :  A  T  R  H  H  Q  I  Y  I  K  I  S  N  I  Q  A  P  L  *  E  *  H  Q  G  Y  L  R  R  T  G  Q  E  E  W  *  *  *  K  I  R  R  C  W  K  N  S  Q  V  K  K  H  V  C  S  Y  V  *  R  E  I  F  Q  E  *  K  W  Q  E  *  S  R  G  S  T  G  R  Y  *  *  R  C  *  N  S  M  I  R  S  A  *  I  L  S  T  S  M  L  C  L  I  C  L  C  T  F  S  Q  Q  V  *  I  E  D  Y  F  E  S  F  Y  *  F  F  L  L  V  M  N  F  I  F  L  G  Q  S  L  *  I  C  A  S  V  H  Q  I  F   </first_frame>
            <second_frame>  * :   L  R  G  I  T  K  S  I  S  R  F  P  T  F  K  R  R  F  E  S  S  I  K  V  I  L  E  E  L  A  K  K  N  G  D  S  R  K  S  E  D  A  G  R  T  P  R  S  K  S  M  F  V  R  M  F  S  E  K  S  F  K  N  R  N  G  K  S  D  Q  E  A  Q  L  V  D  T  D  R  D  V  E  I  Q  *  *  D  P  H  E  F  Y  P  L  A  C  F  A  *  S  V  C  A  L  S  V  N  R  F  R  L  K  T  I  L  K  A  F  I  S  S  S  C  *  *  *  I  L  Y  F  L  D  K  V  Y  E  Y  V  H  Q  F  I  K  Y  F  </second_frame>
            <third_frame>    : S  Y  E  A  S  P  N  L  Y  Q  D  F  Q  H  S  S  A  A  L  R  V  A  S  R  L  S  *  K  N  W  P  R  R  M  V  I  V  E  N  Q  K  M  L  E  E  L  P  G  Q  K  A  C  L  F  V  C  L  A  R  N  L  S  R  I  E  M  A  R  V  I  K  R  L  N  W  *  I  L  I  E  M  L  K  F  N  D  K  I  R  M  N  S  I  H  *  H  A  L  L  N  L  S  V  H  F  Q  S  T  G  L  D  *  R  L  F  *  K  L  L  L  V  L  P  A  S  N  E  F  Y  I  S  W  T  K  F  M  N  M  C  I  S  S  S  N  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65590" stop="65336"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRGITKSISRFPTFKRRFESSIKVILEELAKKNGDSRKSEDAGRTPRSKSMFVRMFSEKSFKNRNGKSDQEAQLVDTDRDVEIQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="68331" e_stop="67496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="68331" e_stop="67496" e_length="836"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68331" stop="67496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739219" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGATGGGACCTGGGACACAGTGAAAGGAAGCTTGACCATTGTTAGGGATTTGAAGGATGTCTTATACCATTCCTATTTCTCAATCATGGATGATTTCCGACTTCAAGAACCTCCTGATGGAAAATGCTACGAGATCAGGTTTTGTTGAATCGTCTATCTCAAAGTTCTTTTTCCCGTCTTTGTCCAATTTGAAATTTGATAGTTTTCTCTATAGTTCCATACCTTATATCTTTCATTATCAGAGAGTCTCAGATAACTAGTTAGTATGTCAATTCAGTTAATGAATTGTATCTTTTATTGGAAATATACAACAAAGCAGCTTGCCGTTGTTTGCTAATTACATGCTCTACTTTTACATCTCTGTCAGTTGAAACCTACACCTCAAAGCTTTCTTGACAACTCCTACCATATGTGATGACAGGGTAGAGATGGTGGTGTAATTTTAGCTACAGAAGCTTGCACGACAGATGAGAGAATATCTCGTATGATGGTTAACCTAAAAGAAAAACATGAACGGAGAATCTGAATGTCCCCTATTTTCCTAGAATATTTCATCTATTTTAACTTCCGTTTCAGAAGAATTTTCAAAACTCCAGCTTTCCCTGTAGGTTTGATCTATTTTTGTATTAGTTCATTCCAAAAATATATATCCCGGTGACTAAATGGCAAACTATACAAAAAGAAATATAAGAAGTATATACTTACTGTTCATAGCATCTTTACATCTTCCACATATATTTTGCTTATAACACTTTACACTGTCAAGATTTTTCTGAATATCAGTGAAGCGTCAAGTTAGTTCATGCAAAATCTTAAAACACTTATTTAGTTTCTC</gDNA_template>
            <first_frame> R  M  G  P  G  T  Q  *  K  E  A  *  P  L  L  G  I  *  R  M  S  Y  T  I  P  I  S  Q  S  W  M  I  S  D  F  K  N  L  L  M  E  N  A  T  R  S  G  F  V  E  S  S  I  S  K  F  F  F  P  S  L  S  N  L  K  F  D  S  F  L  Y  S  S  I  P  Y  I  F  H  Y  Q  R  V  S  D  N  *  L  V  C  Q  F  S  *  *  I  V  S  F  I  G  N  I  Q  Q  S  S  L  P  L  F  A  N  Y  M  L  Y  F  Y  I  S  V  S  *  N  L  H  L  K  A  F  L  T  T  P  T  I  C  D  D  R  V  E  M  V  V  *  F  *  L  Q  K  L  A  R  Q  M  R  E  Y  L  V  *  W  L  T  *  K  K  N  M  N  G  E  S  E  C  P  L  F  S  *  N  I  S  S  I  L  T  S  V  S  E  E  F  S  K  L  Q  L  S  L  *  V  *  S  I  F  V  L  V  H  S  K  N  I  Y  P  G  D  *  M  A  N  Y  T  K  R  N  I  R  S  I  Y  L  L  F  I  A  S  L  H  L  P  H  I  F  C  L  *  H  F  T  L  S  R  F  F  *  I  S  V  K  R  Q  V  S  S  C  K  I  L  K  H  L  F  S  F   </first_frame>
            <second_frame>  G  W  D  L  G  H  S  E  R  K  L  D  H  C  *  G  F  E  G  C  L  I  P  F  L  F  L  N  H  G  *  F  P  T  S  R  T  S  *  W  K  M  L  R  D  Q  V  L  L  N  R  L  S  Q  S  S  F  S  R  L  C  P  I  *  N  L  I  V  F  S  I  V  P  Y  L  I  S  F  I  I  R  E  S  Q  I  T  S  *  Y  V  N  S  V  N  E  L  Y  L  L  L  E  I  Y  N  K  A  A  C  R  C  L  L  I  T  C  S  T  F  T  S  L  S  V  E  T  Y  T  S  K  L  S  *  Q  L  L  P  Y  V  M  T  G  *  R  W  W  C  N  F  S  Y  R  S  L  H  D  R  *  E  N  I  S  Y  D  G  *  P  K  R  K  T  *  T  E  N  L  N  V  P  Y  F  P  R  I  F  H  L  F  *  L  P  F  Q  K  N  F  Q  N  S  S  F  P  C  R  F  D  L  F  L  Y  *  F  I  P  K  I  Y  I  P  V  T  K  W  Q  T  I  Q  K  E  I  *  E  V  Y  T  Y  C  S  *  H  L  Y  I  F  H  I  Y  F  A  Y  N  T  L  H  C  Q  D  F  S  E  Y  Q  *  S  V  K  L  V  H  A  K  S  *  N  T  Y  L  V  S  </second_frame>
            <third_frame>   D  G  T  W  D  T  V  K  G  S  L  T  I  V  R  D  L  K  D  V  L  Y  H  S  Y  F  S  I  M  D  D  F  R  L  Q  E  P  P  D  G  K  C  Y  E  I  R  F  C  *  I  V  Y  L  K  V  L  F  P  V  F  V  Q  F  E  I  *  *  F  S  L  *  F  H  T  L  Y  L  S  L  S  E  S  L  R  *  L  V  S  M  S  I  Q  L  M  N  C  I  F  Y  W  K  Y  T  T  K  Q  L  A  V  V  C  *  L  H  A  L  L  L  H  L  C  Q  L  K  P  T  P  Q  S  F  L  D  N  S  Y  H  M  *  *  Q  G  R  D  G  G  V  I  L  A  T  E  A  C  T  T  D  E  R  I  S  R  M  M  V  N  L  K  E  K  H  E  R  R  I  *  M  S  P  I  F  L  E  Y  F  I  Y  F  N  F  R  F  R  R  I  F  K  T  P  A  F  P  V  G  L  I  Y  F  C  I  S  S  F  Q  K  Y  I  S  R  *  L  N  G  K  L  Y  K  K  K  Y  K  K  Y  I  L  T  V  H  S  I  F  T  S  S  T  Y  I  L  L  I  T  L  Y  T  V  K  I  F  L  N  I  S  E  A  S  S  *  F  M  Q  N  L  K  T  L  I  *  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68277" stop="68071"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMSYTIPISQSWMISDFKNLLMENATRSGFVESSISKFFFPSLSNLKFDSFLYSSIPYIFHYQRVSDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="69372" e_stop="68813"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="69372" e_stop="68813" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69372" stop="68813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298281" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGTTCTAATATCCTCAAAACCCACATCCACATCTTCATCTATGTTTCCATTTTACGTACTGACTACGGAAAGACTCAGTTCTTTTCAGCAAAATCCGAGATTTTTTGGTTGCATTTTCCAAGATTAATTGATTTGTGAAAAGGGGTTGTACCTTGTTAGTGATTGTGTAAAGATCGAGTGGTTCTTGATTTAGCGAAGCATAAGAATGGAACCTCCAAGGGGGGTTTTTGATTCGGTGTGGAACTTCATTCGTTTCTTACCTTACTTCATTAGCCTGCTTATTTTGGGTGTCTTGAAAGGTTCTTTTCTTCTTCTTCAATTACACTCATGTCACTGTTGTCTCTTCTTTCCTTTTTTTCAATTAGCATACTTTTTTCATTTTTCTTGTTTTTCATCTCTGTTGCTTTAAAATGATTTTACTTGAGCTGAGAAACAACCTCTCTATCTCCCAAGGTAGGGGTAAGGTCTATACTTACCAGATCCCACTCACCAGGTAAGTTGTTGTTGTTTTACTGTTCCAAAGCTAGTCATAGAAATGACTGGTTTGTGCTACTTACT</gDNA_template>
            <first_frame> F  V  L  I  S  S  K  P  T  S  T  S  S  S  M  F  P  F  Y  V  L  T  T  E  R  L  S  S  F  Q  Q  N  P  R  F  F  G  C  I  F  Q  D  *  L  I  C  E  K  G  L  Y  L  V  S  D  C  V  K  I  E  W  F  L  I  *  R  S  I  R  M  E  P  P  R  G  V  F  D  S  V  W  N  F  I  R  F  L  P  Y  F  I  S  L  L  I  L  G  V  L  K  G  S  F  L  L  L  Q  L  H  S  C  H  C  C  L  F  F  P  F  F  Q  L  A  Y  F  F  H  F  S  C  F  S  S  L  L  L  *  N  D  F  T  *  A  E  K  Q  P  L  Y  L  P  R  *  G  *  G  L  Y  L  P  D  P  T  H  Q  V  S  C  C  C  F  T  V  P  K  L  V  I  E  M  T  G  L  C  Y  L   </first_frame>
            <second_frame>  L  F  *  Y  P  Q  N  P  H  P  H  L  H  L  C  F  H  F  T  Y  *  L  R  K  D  S  V  L  F  S  K  I  R  D  F  L  V  A  F  S  K  I  N  *  F  V  K  R  G  C  T  L  L  V  I  V  *  R  S  S  G  S  *  F  S  E  A  *  E  W  N  L  Q  G  G  F  L  I  R  C  G  T  S  F  V  S  Y  L  T  S  L  A  C  L  F  W  V  S  *  K  V  L  F  F  F  F  N  Y  T  H  V  T  V  V  S  S  F  L  F  F  N  *  H  T  F  F  I  F  L  V  F  H  L  C  C  F  K  M  I  L  L  E  L  R  N  N  L  S  I  S  Q  G  R  G  K  V  Y  T  Y  Q  I  P  L  T  R  *  V  V  V  V  L  L  F  Q  S  *  S  *  K  *  L  V  C  A  T  Y  </second_frame>
            <third_frame>   C  S  N  I  L  K  T  H  I  H  I  F  I  Y  V  S  I  L  R  T  D  Y  G  K  T  Q  F  F  S  A  K  S  E  I  F  W  L  H  F  P  R  L  I  D  L  *  K  G  V  V  P  C  *  *  L  C  K  D  R  V  V  L  D  L  A  K  H  K  N  G  T  S  K  G  G  F  *  F  G  V  E  L  H  S  F  L  T  L  L  H  *  P  A  Y  F  G  C  L  E  R  F  F  S  S  S  S  I  T  L  M  S  L  L  S  L  L  S  F  F  S  I  S  I  L  F  S  F  F  L  F  F  I  S  V  A  L  K  *  F  Y  L  S  *  E  T  T  S  L  S  P  K  V  G  V  R  S  I  L  T  R  S  H  S  P  G  K  L  L  L  F  Y  C  S  K  A  S  H  R  N  D  W  F  V  L  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="20" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69177" stop="68962"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSIRMEPPRGVFDSVWNFIRFLPYFISLLILGVLKGSFLLLQLHSCHCCLFFPFFQLAYFFHFSCFSSLLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="72988" PGL_stop="71704"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72988" e_stop="71704"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72988" e_stop="71704" e_length="1285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72988" stop="72285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72988" stop="72508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72843" stop="72157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72378" stop="71797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72322" stop="71704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369433" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTGCTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATGATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAAAGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTAAGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCCGATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAAGGAACATGATAAGCACAACTTTATATTGCTAGTGTGTGTAAGTATACAACTCATTGTCTATATGTTGTGCTGTTTTCAACAAAGAGTGTATGCTTCCTCTTGCGTAAAGCTACATTAGTTGATTGACTTTAGATGCAAAATCAGGCTTATCCCAATTACCTTTTCACCTCTATCCTGGATTCAAGCATTCATCTTTTCTCTTGCACTTTCAATATATAAACCGCCCCATCATATTATTATCAATTTATACAATATGCCTCCCTTTAATTTGCGAATCAAATACAGTCATGCCTCCGAGAGTGTTCGTTCAAAACTCAACCTTGACAGAAAACACTAGTTGATTCTTTCCCTTTGTCCTAGCTTTAGTGGATATAGTTTATTCATACTTATTGCTGGCGTGAGATGGCATGTACCAACTCTGCTAATTTTGTTCCCTTTGTACTGAAAAAGTTGAAACCCTTCCTTTTGTACTGAAAAAGTTGAAACCCTTTAGAGTTGTTTCCATAGAATTTCAGGCTGACAGGTAATTTGAGGAAGCATATTAATATTCTTCTTGTACAACTACCAAAAAGCTTGCTAGAATCAATTCCTTGACATATGTTTGATGTAAGTATTTATTGAACTAAATTTTTTTGTC</gDNA_template>
            <first_frame> M  V  E  K  G  E  K  P  T  V  I  S  Y  G  A  L  L  S  A  L  E  K  G  K  L  Y  D  E  A  L  Q  V  W  K  H  M  I  K  V  G  I  E  P  N  L  Y  A  Y  T  I  M  A  S  I  Y  T  A  Q  G  K  F  N  I  V  D  S  I  I  K  E  M  V  T  T  G  V  E  P  T  V  V  T  F  N  A  I  I  S  G  C  A  R  N  G  M  E  S  V  A  Y  E  W  F  Q  R  M  K  T  Q  N  I  T  P  N  E  V  S  Y  E  V  L  I  E  A  L  A  N  D  G  K  P  R  L  A  Y  E  L  Y  V  R  A  L  T  E  G  L  S  L  S  T  K  A  Y  D  A  V  I  S  S  T  Q  A  Y  G  A  S  I  D  L  S  I  L  G  P  R  P  P  E  K  K  K  R  V  Q  I  R  K  S  L  S  E  F  C  H  I  A  D  V  P  R  R  S  R  P  F  D  R  E  E  I  F  T  A  Q  T  K  G  T  *  *  A  Q  L  Y  I  A  S  V  C  K  Y  T  T  H  C  L  Y  V  V  L  F  S  T  K  S  V  C  F  L  L  R  K  A  T  L  V  D  *  L  *  M  Q  N  Q  A  Y  P  N  Y  L  F  T  S  I  L  D  S  S  I  H  L  F  S  C  T  F  N  I  *  T  A  P  S  Y  Y  Y  Q  F  I  Q  Y  A  S  L  *  F  A  N  Q  I  Q  S  C  L  R  E  C  S  F  K  T  Q  P  *  Q  K  T  L  V  D  S  F  P  L  S  *  L  *  W  I  *  F  I  H  T  Y  C  W  R  E  M  A  C  T  N  S  A  N  F  V  P  F  V  L  K  K  L  K  P  F  L  L  Y  *  K  S  *  N  P  L  E  L  F  P  *  N  F  R  L  T  G  N  L  R  K  H  I  N  I  L  L  V  Q  L  P  K  S  L  L  E  S  I  P  *  H  M  F  D  V  S  I  Y  *  T  K  F  F  C  </first_frame>
            <second_frame>  W  *  R  K  V  K  N  L  Q  L  Y  P  M  E  R  C  S  V  L  *  K  K  A  S  S  M  M  K  L  F  R  F  G  N  I  *  S  K  W  G  S  S  Q  I  C  M  P  I  L  L  W  H  Q  F  T  L  L  K  G  N  L  T  *  L  I  L  S  S  R  R  W  L  L  L  E  L  S  L  Q  L  L  H  S  T  L  L  L  V  D  V  L  G  M  V  W  K  V  L  H  T  S  G  F  S  V  *  K  L  K  T  *  P  R  M  R  *  A  M  K  C  *  L  R  L  L  P  M  M  A  S  R  G  *  H  M  S  C  M  *  E  L  *  L  K  A  *  V  F  L  Q  R  L  M  M  Q  S  S  H  L  H  R  H  M  V  Q  V  L  I  *  A  F  L  A  P  A  H  Q  K  K  R  N  E  C  K  S  G  K  V  C  L  N  S  V  I  *  P  M  F  P  E  E  A  G  P  L  T  G  K  K  F  L  L  L  R  Q  K  E  H  D  K  H  N  F  I  L  L  V  C  V  S  I  Q  L  I  V  Y  M  L  C  C  F  Q  Q  R  V  Y  A  S  S  C  V  K  L  H  *  L  I  D  F  R  C  K  I  R  L  I  P  I  T  F  S  P  L  S  W  I  Q  A  F  I  F  S  L  A  L  S  I  Y  K  P  P  H  H  I  I  I  N  L  Y  N  M  P  P  F  N  L  R  I  K  Y  S  H  A  S  E  S  V  R  S  K  L  N  L  D  R  K  H  *  L  I  L  S  L  C  P  S  F  S  G  Y  S  L  F  I  L  I  A  G  V  R  W  H  V  P  T  L  L  I  L  F  P  L  Y  *  K  S  *  N  P  S  F  C  T  E  K  V  E  T  L  *  S  C  F  H  R  I  S  G  *  Q  V  I  *  G  S  I  L  I  F  F  L  Y  N  Y  Q  K  A  C  *  N  Q  F  L  D  I  C  L  M  *  V  F  I  E  L  N  F  F  V </second_frame>
            <third_frame>   G  R  E  R  *  K  T  Y  S  Y  I  L  W  S  V  A  Q  C  S  R  K  R  Q  A  L  *  *  S  S  S  G  L  E  T  Y  D  Q  S  G  D  R  A  K  F  V  C  L  Y  Y  Y  G  I  N  L  H  C  S  R  E  I  *  H  S  *  F  Y  H  Q  G  D  G  Y  Y  W  S  *  A  Y  S  C  Y  I  Q  R  Y  Y  *  W  M  C  S  E  W  Y  G  K  C  C  I  R  V  V  S  A  Y  E  N  S  K  H  N  P  E  *  G  K  L  *  S  A  N  *  G  S  C  Q  *  W  Q  A  E  A  S  I  *  V  V  C  E  S  S  N  *  R  P  E  S  F  Y  K  G  L  *  C  S  H  L  I  Y  T  G  I  W  C  K  Y  *  S  K  H  S  W  P  P  P  T  R  K  K  E  T  S  A  N  Q  E  K  F  V  *  I  L  S  Y  S  R  C  S  Q  K  K  Q  A  L  *  Q  G  R  N  F  Y  C  S  D  K  R  N  M  I  S  T  T  L  Y  C  *  C  V  *  V  Y  N  S  L  S  I  C  C  A  V  F  N  K  E  C  M  L  P  L  A  *  S  Y  I  S  *  L  T  L  D  A  K  S  G  L  S  Q  L  P  F  H  L  Y  P  G  F  K  H  S  S  F  L  L  H  F  Q  Y  I  N  R  P  I  I  L  L  S  I  Y  T  I  C  L  P  L  I  C  E  S  N  T  V  M  P  P  R  V  F  V  Q  N  S  T  L  T  E  N  T  S  *  F  F  P  F  V  L  A  L  V  D  I  V  Y  S  Y  L  L  L  A  *  D  G  M  Y  Q  L  C  *  F  C  S  L  C  T  E  K  V  E  T  L  P  F  V  L  K  K  L  K  P  F  R  V  V  S  I  E  F  Q  A  D  R  *  F  E  E  A  Y  *  Y  S  S  C  T  T  T  K  K  L  A  R  I  N  S  L  T  Y  V  *  C  K  Y  L  L  N  *  I  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72988" stop="72332"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MVEKGEKPTVISYGALLSALEKGKLYDEALQVWKHMIKVGIEPNLYAYTIMASIYTAQGKFNIVDSIIKEMVTTGVEPTVVTFNAIISGCARNGMESVAYEWFQRMKTQNITPNEVSYEVLIEALANDGKPRLAYELYVRALTEGLSLSTKAYDAVISSTQAYGASIDLSILGPRPPEKKKRVQIRKSLSEFCHIADVPRRSRPFDREEIFTAQTKGT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72222" stop="72004"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIDFRCKIRLIPITFSPLSWIQAFIFSLALSIYKPPHHIIINLYNMPPFNLRIKYSHASESVRSKLNLDRKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="74006" PGL_stop="73362"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74006" e_stop="73362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74006" e_stop="73362" e_length="645"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74006" stop="73362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74006" stop="73417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246809" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73955" stop="73738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGA</gDNA_template>
            <first_frame> L  L  I  Y  D  *  R  F  W  *  R  *  E  T  E  L  C  Y  G  T  C  R  V  V  K  E  E  E  G  Q  G  Q  Y  W  L  Y  *  L  K  C  V  H  L  *  Q  S  F  R  C  H  K  R  G  G  E  V  *  F  C  *  *  S  H  G  *  Y  G  F  R  R  S  A  A  *  C  C  D  V  Q  Y  F  N  E  N  L  Y  R  T  R  S  G  T  *  S  S  Q  T  F  Q  G  D  A  K  E  G  T  H  S  *  S  C  I  L  F  H  C  L  V  C  L  S  E  T  *  R  W  I  W  C  Y  N  F  L  C  R  D  T  R  E  I  S  K  W  *  N  R  K  Y  *  G  R  K  L  G  G  *  I  C  Q  A  *  E  F  H  S  S  N  L  L  P  G  D  A  A  V  A  G  K  G  *  K  C  K  H  Q  C  S  E  T  T  N  G  Y  G  *  G  *  A  P  T  K  S  C  R  I  *  T  S  G  V  G  L  Y  S  * </first_frame>
            <second_frame>  Y  S  S  M  I  R  G  F  G  K  D  K  K  L  N  S  A  M  A  L  V  E  W  L  R  R  R  R  G  K  D  N  I  G  S  I  S  L  N  V  F  I  Y  N  S  L  L  G  A  I  K  E  A  G  K  Y  D  F  V  D  K  V  M  D  D  M  V  S  E  G  V  Q  P  N  V  V  T  Y  N  T  L  M  R  T  Y  I  E  Q  G  R  E  L  E  A  L  K  L  F  R  E  M  P  K  K  G  L  T  P  S  P  A  S  Y  S  T  A  L  F  A  Y  R  R  L  E  D  G  F  G  A  I  T  F  F  V  E  T  R  E  R  Y  Q  N  G  E  I  G  N  I  E  E  E  N  W  E  D  E  F  A  K  L  E  N  F  I  V  R  I  C  Y  Q  V  M  R  Q  W  L  V  K  G  E  N  A  N  T  N  V  L  K  L  L  T  D  M  D  R  A  R  L  Q  L  S  R  A  E  Y  E  R  L  V  W  A  C  T  R   </second_frame>
            <third_frame>   T  H  L  *  L  E  V  L  V  K  I  R  N  *  T  L  L  W  H  L  S  S  G  *  G  G  G  G  A  R  T  I  L  A  L  L  A  *  M  C  S  F  I  T  V  F  *  V  P  *  K  R  R  G  S  M  I  L  L  I  K  S  W  M  I  W  F  Q  K  E  C  S  L  M  L  *  R  T  I  L  *  *  E  L  I  *  N  K  V  G  N  L  K  L  S  N  F  S  G  R  C  Q  R  R  D  S  L  L  V  L  H  P  I  P  L  P  C  L  L  I  G  D  L  K  M  D  L  V  L  *  L  S  L  S  R  H  E  R  D  I  K  M  V  K  *  E  I  L  R  K  K  T  G  R  M  N  L  P  S  L  R  I  S  *  F  E  F  A  T  R  *  C  G  S  G  W  *  R  V  K  M  Q  T  P  M  F  *  N  Y  *  R  I  W  I  G  L  G  S  N  *  V  V  Q  N  M  N  V  W  C  G  P  V  L  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74005" stop="73364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSSMIRGFGKDKKLNSAMALVEWLRRRRGKDNIGSISLNVFIYNSLLGAIKEAGKYDFVDKVMDDMVSEGVQPNVVTYNTLMRTYIEQGRELEALKLFREMPKKGLTPSPASYSTALFAYRRLEDGFGAITFFVETRERYQNGEIGNIEEENWEDEFAKLENFIVRICYQVMRQWLVKGENANTNVLKLLTDMDRARLQLSRAEYERLVWACTR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="82130" PGL_stop="83188"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82130" e_stop="82398"/>
            <exon e_start="82689" e_stop="83188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.703" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82130" e_stop="82398" e_length="269"/>
          </exon>
          <intron i_serial="1" don_prob="0.703" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82399" i_stop="82688" i_length="290"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82689" e_stop="83188" e_length="500"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82130" stop="82398"/>
              <exon start="82689" stop="83150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82134" stop="82398"/>
              <exon start="82689" stop="83188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82135" stop="82398"/>
              <exon start="82689" stop="83052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269176" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAACAACTTTTATATTTTTATAAGTAAACGAAAATGATCAAGTTGAGATGCAAAAAGTTCTTCAGAAGCAACTCAAAGGTTGCAAGTAGTAATGCCGTCGTAGCAGATACCAAATTAGGTGGTGAAATAAAATGGGAATTACGTCCAGGAGGTATGTTGGTACAAAAGAGAGAATGTGCAGAGAATGATGGAGATTCAATTATCACACTTAGAGTCTCTACTGTAACTCAATGGCATCACATTTCTATACAACCAACTTCATCTTTTG : GAGAATTAAAGATGGTATTGGCAATGGTAACTGGTTTAGAACCAAATGAGCAAAGACTATTATACAAAGGGAAAGAAAGAGAGGATTGTGAATACTTGCACATGGTGGGGGTGAAAGACAAAGACAAAGTGTTACTCTTTCAAGATCCATCTATCAAAGAGAGGAAACTTGCAACAAATGGACATGTCCAAGATATAGGATCCACTTACCACACCATTTGTGTCTAATGAGTAACATTATTAGTGTGTGCAATTTCTTGCCTTTTCTTTAAAAAACTAACCCCCTCATCCCCCTCCACTCCCCTCCTCATCAAGAAAATGAGTGATGATGGATCAAGATTGGTGATAAGTATATGCTCACCAACTTAGATCGACTAGATTATGTGGTTGTTTTTATGGTGTGTAATGCCAAATTTTAATTTTATATGCCCTGGTAGCATATATCAAAATTCAAAATTAATGTGTAATCTACTCCAGCATCTCGATTAGGTTATCGAGTTT</gDNA_template>
            <first_frame> L  T  T  F  I  F  L  *  V  N  E  N  D  Q  V  E  M  Q  K  V  L  Q  K  Q  L  K  G  C  K  *  *  C  R  R  S  R  Y  Q  I  R  W  *  N  K  M  G  I  T  S  R  R  Y  V  G  T  K  E  R  M  C  R  E  *  W  R  F  N  Y  H  T  *  S  L  Y  C  N  S  M  A  S  H  F  Y  T  T  N  F  I  F  W :   R  I  K  D  G  I  G  N  G  N  W  F  R  T  K  *  A  K  T  I  I  Q  R  E  R  K  R  G  L  *  I  L  A  H  G  G  G  E  R  Q  R  Q  S  V  T  L  S  R  S  I  Y  Q  R  E  E  T  C  N  K  W  T  C  P  R  Y  R  I  H  L  P  H  H  L  C  L  M  S  N  I  I  S  V  C  N  F  L  P  F  L  *  K  T  N  P  L  I  P  L  H  S  P  P  H  Q  E  N  E  *  *  W  I  K  I  G  D  K  Y  M  L  T  N  L  D  R  L  D  Y  V  V  V  F  M  V  C  N  A  K  F  *  F  Y  M  P  W  *  H  I  S  K  F  K  I  N  V  *  S  T  P  A  S  R  L  G  Y  R  V  </first_frame>
            <second_frame>  *  Q  L  L  Y  F  Y  K  *  T  K  M  I  K  L  R  C  K  K  F  F  R  S  N  S  K  V  A  S  S  N  A  V  V  A  D  T  K  L  G  G  E  I  K  W  E  L  R  P  G  G  M  L  V  Q  K  R  E  C  A  E  N  D  G  D  S  I  I  T  L  R  V  S  T  V  T  Q  W  H  H  I  S  I  Q  P  T  S  S  F   : G  E  L  K  M  V  L  A  M  V  T  G  L  E  P  N  E  Q  R  L  L  Y  K  G  K  E  R  E  D  C  E  Y  L  H  M  V  G  V  K  D  K  D  K  V  L  L  F  Q  D  P  S  I  K  E  R  K  L  A  T  N  G  H  V  Q  D  I  G  S  T  Y  H  T  I  C  V  *  *  V  T  L  L  V  C  A  I  S  C  L  F  F  K  K  L  T  P  S  S  P  S  T  P  L  L  I  K  K  M  S  D  D  G  S  R  L  V  I  S  I  C  S  P  T  *  I  D  *  I  M  W  L  F  L  W  C  V  M  P  N  F  N  F  I  C  P  G  S  I  Y  Q  N  S  K  L  M  C  N  L  L  Q  H  L  D  *  V  I  E  F </second_frame>
            <third_frame>   N  N  F  Y  I  F  I  S  K  R  K  *  S  S  *  D  A  K  S  S  S  E  A  T  Q  R  L  Q  V  V  M  P  S  *  Q  I  P  N  *  V  V  K  *  N  G  N  Y  V  Q  E  V  C  W  Y  K  R  E  N  V  Q  R  M  M  E  I  Q  L  S  H  L  E  S  L  L  *  L  N  G  I  T  F  L  Y  N  Q  L  H  L  L  :  E  N  *  R  W  Y  W  Q  W  *  L  V  *  N  Q  M  S  K  D  Y  Y  T  K  G  K  K  E  R  I  V  N  T  C  T  W  W  G  *  K  T  K  T  K  C  Y  S  F  K  I  H  L  S  K  R  G  N  L  Q  Q  M  D  M  S  K  I  *  D  P  L  T  T  P  F  V  S  N  E  *  H  Y  *  C  V  Q  F  L  A  F  S  L  K  N  *  P  P  H  P  P  P  L  P  S  S  S  R  K  *  V  M  M  D  Q  D  W  *  *  V  Y  A  H  Q  L  R  S  T  R  L  C  G  C  F  Y  G  V  *  C  Q  I  L  I  L  Y  A  L  V  A  Y  I  K  I  Q  N  *  C  V  I  Y  S  S  I  S  I  R  L  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82158" stop="82398"/>
                    <exon start="82689" stop="82915"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKMIKLRCKKFFRSNSKVASSNAVVADTKLGGEIKWELRPGGMLVQKRECAENDGDSIITLRVSTVTQWHHISIQPTSSFGELKMVLAMVTGLEPNEQRLLYKGKEREDCEYLHMVGVKDKDKVLLFQDPSIKERKLATNGHVQDIGSTYHTICV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="92058" PGL_stop="89379"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92058" e_stop="91561"/>
            <exon e_start="91444" e_stop="91132"/>
            <exon e_start="89437" e_stop="89379"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.952"/>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="92058" e_stop="91561" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91444" e_stop="91132" e_length="313"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="91131" i_stop="89438" i_length="1694"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89437" e_stop="89379" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92058" stop="91561"/>
              <exon start="91444" stop="91354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91931" stop="91561"/>
              <exon start="91444" stop="91328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91808" stop="91561"/>
              <exon start="91444" stop="91132"/>
              <exon start="89437" stop="89413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91804" stop="91561"/>
              <exon start="91444" stop="91132"/>
              <exon start="89437" stop="89379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91804" stop="91561"/>
              <exon start="91444" stop="91132"/>
              <exon start="89437" stop="89379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688182" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG : GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT : GGGCAACTGATGAGTAGCAGTTCAGTTGTGCATAGAGTGCCAGAAGTAATTGGAAATGA</gDNA_template>
            <first_frame> K  H  Y  T  F  *  V  L  F  F  K  K  K  K  K  T  L  I  E  *  I  D  Y  N  C  C  Y  Y  A  Y  V  R  C  R  M  P  V  K  E  W  *  I  E  K  P  K  Q  G  E  A  Q  K  T  K  V  P  E  P  K  C  G  A  I  R  E  K  T  P  E  V  R  *  *  D  G  F  I  I  Q  R  *  H  T  *  S  S  T  A  Q  S  V  P  T  A  P  R  K  F  I  R  *  *  R  Q  Y  *  Y  C  P  R  *  Q  R  S  S  L  L  C  W  R  *  K  Q  R  H  Y  T  Q  R  S  S  C  F  F  K  G  *  N  *  Q  Q  H  K  Y  *  R  S  Q  L  H  G  S  F  V  I  G  G  Q  P  H  I  C  R  H  L  Q  :  G  T  R  R  *  A  C  T  D  G  S  E  E  Q  R  E  G  K  Q  G  R  R  E  M  G  C  L  L  R  R  C  *  F  G  S  T  *  *  E  Y  E  E  G  *  R  S  K  *  L  S  V  E  Q  T  A  T  T  I  V  T  K  A  *  L  *  R  N  I  E  C  L  V  R  *  R  S  T  L  P  S  V  P  V  P  P  D  C  S  R  H  P  *  R  F  P  R  L  R  H  A  F  F  D  K   : W  A  T  D  E  *  Q  F  S  C  A  *  S  A  R  S  N  W  K  * </first_frame>
            <second_frame>  N  I  T  L  F  E  Y  Y  S  L  K  K  K  K  K  H  *  *  S  E  L  I  I  I  V  V  I  M  H  M  S  D  A  G  C  R  S  K  N  G  K  S  K  S  R  N  K  V  K  R  R  K  P  K  F  L  S  L  S  V  E  L  S  E  K  K  P  Q  K  S  D  D  R  M  V  S  S  S  N  G  S  T  H  D  H  Q  Q  L  N  L  F  P  L  H  P  E  N  L  L  D  D  K  D  S  T  S  T  A  Q  D  D  N  V  A  L  F  F  A  G  A  E  N  S  A  T  T  L  N  E  V  L  V  S  S  K  D  E  I  D  S  N  I  S  T  S  V  P  N  Y  M  A  V  S  S  S  E  A  S  L  T  F  A  D  T  Y  R :   G  Q  E  G  E  L  V  R  T  A  L  R  N  K  E  R  E  N  R  E  E  E  K  W  V  V  Y  S  D  V  V  D  L  D  Q  H  S  E  S  T  R  K  D  E  E  V  S  S  C  P  W  N  K  R  Q  Q  Q  L  S  L  K  L  D  Y  D  E  I  L  N  A  W  S  D  K  G  P  L  Y  L  Q  S  Q  S  P  Q  I  V  P  D  I  H  D  D  F  L  A  F  D  M  P  F  S  I  N  :  G  Q  L  M  S  S  S  S  V  V  H  R  V  P  E  V  I  G  N   </second_frame>
            <third_frame>   T  L  H  F  L  S  T  I  L  *  K  K  K  K  N  T  N  R  V  N  *  L  *  L  L  L  L  C  I  C  P  M  P  D  A  G  Q  R  M  V  N  R  K  A  E  T  R  *  S  A  E  N  Q  S  S  *  A  *  V  W  S  Y  Q  R  K  N  P  R  S  Q  M  I  G  W  F  H  H  P  T  V  A  H  M  I  I  N  S  S  I  C  S  H  C  T  Q  K  I  Y  *  M  I  K  T  V  L  V  L  P  K  M  T  T  *  L  S  S  L  L  A  L  K  T  A  P  L  H  S  T  K  F  L  F  L  Q  R  M  K  L  T  A  T  *  V  L  A  F  P  I  T  W  Q  F  R  H  R  R  P  A  S  H  L  P  T  L  T   : G  D  K  K  V  S  L  Y  G  R  L  *  G  T  K  R  G  K  T  G  K  K  R  N  G  L  F  T  Q  T  L  L  I  W  I  N  I  V  R  V  R  G  R  M  K  K  *  V  V  V  R  G  T  N  G  N  N  N  C  H  *  S  L  I  M  T  K  Y  *  M  L  G  P  I  K  V  H  F  T  F  S  P  S  P  P  R  L  F  Q  T  S  M  T  I  S  S  P  S  T  C  L  F  R  *  M :   G  N  *  *  V  A  V  Q  L  C  I  E  C  Q  K  *  L  E  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92003" stop="91561"/>
                    <exon start="91444" stop="91132"/>
                    <exon start="89437" stop="89381"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SELIIIVVIMHMSDAGCRSKNGKSKSRNKVKRRKPKFLSLSVELSEKKPQKSDDRMVSSSNGSTHDHQQLNLFPLHPENLLDDKDSTSTAQDDNVALFFAGAENSATTLNEVLVSSKDEIDSNISTSVPNYMAVSSSEASLTFADTYRGQEGELVRTALRNKERENREEEKWVVYSDVVDLDQHSESTRKDEEVSSCPWNKRQQQLSLKLDYDEILNAWSDKGPLYLQSQSPQIVPDIHDDFLAFDMPFSINGQLMSSSSVVHRVPEVIGN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92058" e_stop="91561"/>
            <exon e_start="91444" e_stop="90965"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.952"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="92058" e_stop="91561" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="91444" e_stop="90965" e_length="480"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92058" stop="91561"/>
              <exon start="91444" stop="91354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91931" stop="91561"/>
              <exon start="91444" stop="91328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91395" stop="90965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219362" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG : GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAATGTTAGTTTTTCTTACCTTACTTTTAAATTTATGTTATCAGGTCATTTAAACGATTTCTAATTTGCGGAAAGGATAACCTTTTAGAACCAAACATAATGTAATGTTGTAGCTATGTGATTTGATGAAATATTATTGATATTTCACTATCTAATACACCTACAGAAGAA</gDNA_template>
            <first_frame> K  H  Y  T  F  *  V  L  F  F  K  K  K  K  K  T  L  I  E  *  I  D  Y  N  C  C  Y  Y  A  Y  V  R  C  R  M  P  V  K  E  W  *  I  E  K  P  K  Q  G  E  A  Q  K  T  K  V  P  E  P  K  C  G  A  I  R  E  K  T  P  E  V  R  *  *  D  G  F  I  I  Q  R  *  H  T  *  S  S  T  A  Q  S  V  P  T  A  P  R  K  F  I  R  *  *  R  Q  Y  *  Y  C  P  R  *  Q  R  S  S  L  L  C  W  R  *  K  Q  R  H  Y  T  Q  R  S  S  C  F  F  K  G  *  N  *  Q  Q  H  K  Y  *  R  S  Q  L  H  G  S  F  V  I  G  G  Q  P  H  I  C  R  H  L  Q  :  G  T  R  R  *  A  C  T  D  G  S  E  E  Q  R  E  G  K  Q  G  R  R  E  M  G  C  L  L  R  R  C  *  F  G  S  T  *  *  E  Y  E  E  G  *  R  S  K  *  L  S  V  E  Q  T  A  T  T  I  V  T  K  A  *  L  *  R  N  I  E  C  L  V  R  *  R  S  T  L  P  S  V  P  V  P  P  D  C  S  R  H  P  *  R  F  P  R  L  R  H  A  F  F  D  K  C  *  F  F  L  P  Y  F  *  I  Y  V  I  R  S  F  K  R  F  L  I  C  G  K  D  N  L  L  E  P  N  I  M  *  C  C  S  Y  V  I  *  *  N  I  I  D  I  S  L  S  N  T  P  T  E  E </first_frame>
            <second_frame>  N  I  T  L  F  E  Y  Y  S  L  K  K  K  K  K  H  *  *  S  E  L  I  I  I  V  V  I  M  H  M  S  D  A  G  C  R  S  K  N  G  K  S  K  S  R  N  K  V  K  R  R  K  P  K  F  L  S  L  S  V  E  L  S  E  K  K  P  Q  K  S  D  D  R  M  V  S  S  S  N  G  S  T  H  D  H  Q  Q  L  N  L  F  P  L  H  P  E  N  L  L  D  D  K  D  S  T  S  T  A  Q  D  D  N  V  A  L  F  F  A  G  A  E  N  S  A  T  T  L  N  E  V  L  V  S  S  K  D  E  I  D  S  N  I  S  T  S  V  P  N  Y  M  A  V  S  S  S  E  A  S  L  T  F  A  D  T  Y  R :   G  Q  E  G  E  L  V  R  T  A  L  R  N  K  E  R  E  N  R  E  E  E  K  W  V  V  Y  S  D  V  V  D  L  D  Q  H  S  E  S  T  R  K  D  E  E  V  S  S  C  P  W  N  K  R  Q  Q  Q  L  S  L  K  L  D  Y  D  E  I  L  N  A  W  S  D  K  G  P  L  Y  L  Q  S  Q  S  P  Q  I  V  P  D  I  H  D  D  F  L  A  F  D  M  P  F  S  I  N  V  S  F  S  Y  L  T  F  K  F  M  L  S  G  H  L  N  D  F  *  F  A  E  R  I  T  F  *  N  Q  T  *  C  N  V  V  A  M  *  F  D  E  I  L  L  I  F  H  Y  L  I  H  L  Q  K   </second_frame>
            <third_frame>   T  L  H  F  L  S  T  I  L  *  K  K  K  K  N  T  N  R  V  N  *  L  *  L  L  L  L  C  I  C  P  M  P  D  A  G  Q  R  M  V  N  R  K  A  E  T  R  *  S  A  E  N  Q  S  S  *  A  *  V  W  S  Y  Q  R  K  N  P  R  S  Q  M  I  G  W  F  H  H  P  T  V  A  H  M  I  I  N  S  S  I  C  S  H  C  T  Q  K  I  Y  *  M  I  K  T  V  L  V  L  P  K  M  T  T  *  L  S  S  L  L  A  L  K  T  A  P  L  H  S  T  K  F  L  F  L  Q  R  M  K  L  T  A  T  *  V  L  A  F  P  I  T  W  Q  F  R  H  R  R  P  A  S  H  L  P  T  L  T   : G  D  K  K  V  S  L  Y  G  R  L  *  G  T  K  R  G  K  T  G  K  K  R  N  G  L  F  T  Q  T  L  L  I  W  I  N  I  V  R  V  R  G  R  M  K  K  *  V  V  V  R  G  T  N  G  N  N  N  C  H  *  S  L  I  M  T  K  Y  *  M  L  G  P  I  K  V  H  F  T  F  S  P  S  P  P  R  L  F  Q  T  S  M  T  I  S  S  P  S  T  C  L  F  R  *  M  L  V  F  L  T  L  L  L  N  L  C  Y  Q  V  I  *  T  I  S  N  L  R  K  G  *  P  F  R  T  K  H  N  V  M  L  *  L  C  D  L  M  K  Y  Y  *  Y  F  T  I  *  Y  T  Y  R  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="24" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92003" stop="91561"/>
                    <exon start="91444" stop="91072"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SELIIIVVIMHMSDAGCRSKNGKSKSRNKVKRRKPKFLSLSVELSEKKPQKSDDRMVSSSNGSTHDHQQLNLFPLHPENLLDDKDSTSTAQDDNVALFFAGAENSATTLNEVLVSSKDEIDSNISTSVPNYMAVSSSEASLTFADTYRGQEGELVRTALRNKERENREEEKWVVYSDVVDLDQHSESTRKDEEVSSCPWNKRQQQLSLKLDYDEILNAWSDKGPLYLQSQSPQIVPDIHDDFLAFDMPFSINVSFSYLTFKFMLSGHLNDF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="92058" e_stop="91561"/>
            <exon e_start="91444" e_stop="91132"/>
            <exon e_start="90865" e_stop="90858"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.952"/>
          <exon-intron don_prob="0.998" acc_prob="0.681" e_score="0.987"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="92058" e_stop="91561" e_length="498"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91560" i_stop="91445" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="91444" e_stop="91132" e_length="313"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.681">
            <gDNA_intron_boundary i_start="91131" i_stop="90866" i_length="266"/>
          </intron>
          <exon e_serial="3" e_score="0.750">
            <gDNA_exon_boundary e_start="90865" e_stop="90858" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92058" stop="91561"/>
              <exon start="91444" stop="91354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91931" stop="91561"/>
              <exon start="91444" stop="91132"/>
              <exon start="90865" stop="90858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91931" stop="91561"/>
              <exon start="91444" stop="91328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACATTACACTTTTTGAGTACTATTCTTTAAAAAAAAAAAAAAAACACTAATAGAGTGAATTGATTATAATTGTTGTTATTATGCATATGTCCGATGCCGGATGCCGGTCAAAGAATGGTAAATCGAAAAGCCGAAACAAGGTGAAGCGCAGAAAACCAAAGTTCCTGAGCCTAAGTGTGGAGCTATCAGAGAAAAAACCCCAGAAGTCAGATGATAGGATGGTTTCATCATCCAACGGTAGCACACATGATCATCAACAGCTCAATCTGTTCCCACTGCACCCAGAAAATTTATTAGATGATAAAGACAGTACTAGTACTGCCCAAGATGACAACGTAGCTCTCTTCTTTGCTGGCGCTGAAAACAGCGCCACTACACTCAACGAAGTTCTTGTTTCTTCAAAGGATGAAATTGACAGCAACATAAGTACTAGCGTTCCCAATTACATGGCAGTTTCGTCATCGGAGGCCAGCCTCACATTTGCCGACACTTACAG : GGGACAAGAAGGTGAGCTTGTACGGACGGCTCTGAGGAACAAAGAGAGGGAAAACAGGGAAGAAGAGAAATGGGTTGTTTACTCAGACGTTGTTGATTTGGATCAACATAGTGAGAGTACGAGGAAGGATGAAGAAGTAAGTAGTTGTCCGTGGAACAAACGGCAACAACAATTGTCACTAAAGCTTGATTATGACGAAATATTGAATGCTTGGTCCGATAAAGGTCCACTTTACCTTCAGTCCCAGTCCCCCCAGATTGTTCCAGACATCCATGACGATTTCCTCGCCTTCGACATGCCTTTTTCGATAAAT : GGTAAATG</gDNA_template>
            <first_frame> K  H  Y  T  F  *  V  L  F  F  K  K  K  K  K  T  L  I  E  *  I  D  Y  N  C  C  Y  Y  A  Y  V  R  C  R  M  P  V  K  E  W  *  I  E  K  P  K  Q  G  E  A  Q  K  T  K  V  P  E  P  K  C  G  A  I  R  E  K  T  P  E  V  R  *  *  D  G  F  I  I  Q  R  *  H  T  *  S  S  T  A  Q  S  V  P  T  A  P  R  K  F  I  R  *  *  R  Q  Y  *  Y  C  P  R  *  Q  R  S  S  L  L  C  W  R  *  K  Q  R  H  Y  T  Q  R  S  S  C  F  F  K  G  *  N  *  Q  Q  H  K  Y  *  R  S  Q  L  H  G  S  F  V  I  G  G  Q  P  H  I  C  R  H  L  Q  :  G  T  R  R  *  A  C  T  D  G  S  E  E  Q  R  E  G  K  Q  G  R  R  E  M  G  C  L  L  R  R  C  *  F  G  S  T  *  *  E  Y  E  E  G  *  R  S  K  *  L  S  V  E  Q  T  A  T  T  I  V  T  K  A  *  L  *  R  N  I  E  C  L  V  R  *  R  S  T  L  P  S  V  P  V  P  P  D  C  S  R  H  P  *  R  F  P  R  L  R  H  A  F  F  D  K   : W  *  M </first_frame>
            <second_frame>  N  I  T  L  F  E  Y  Y  S  L  K  K  K  K  K  H  *  *  S  E  L  I  I  I  V  V  I  M  H  M  S  D  A  G  C  R  S  K  N  G  K  S  K  S  R  N  K  V  K  R  R  K  P  K  F  L  S  L  S  V  E  L  S  E  K  K  P  Q  K  S  D  D  R  M  V  S  S  S  N  G  S  T  H  D  H  Q  Q  L  N  L  F  P  L  H  P  E  N  L  L  D  D  K  D  S  T  S  T  A  Q  D  D  N  V  A  L  F  F  A  G  A  E  N  S  A  T  T  L  N  E  V  L  V  S  S  K  D  E  I  D  S  N  I  S  T  S  V  P  N  Y  M  A  V  S  S  S  E  A  S  L  T  F  A  D  T  Y  R :   G  Q  E  G  E  L  V  R  T  A  L  R  N  K  E  R  E  N  R  E  E  E  K  W  V  V  Y  S  D  V  V  D  L  D  Q  H  S  E  S  T  R  K  D  E  E  V  S  S  C  P  W  N  K  R  Q  Q  Q  L  S  L  K  L  D  Y  D  E  I  L  N  A  W  S  D  K  G  P  L  Y  L  Q  S  Q  S  P  Q  I  V  P  D  I  H  D  D  F  L  A  F  D  M  P  F  S  I  N  :  G  K   </second_frame>
            <third_frame>   T  L  H  F  L  S  T  I  L  *  K  K  K  K  N  T  N  R  V  N  *  L  *  L  L  L  L  C  I  C  P  M  P  D  A  G  Q  R  M  V  N  R  K  A  E  T  R  *  S  A  E  N  Q  S  S  *  A  *  V  W  S  Y  Q  R  K  N  P  R  S  Q  M  I  G  W  F  H  H  P  T  V  A  H  M  I  I  N  S  S  I  C  S  H  C  T  Q  K  I  Y  *  M  I  K  T  V  L  V  L  P  K  M  T  T  *  L  S  S  L  L  A  L  K  T  A  P  L  H  S  T  K  F  L  F  L  Q  R  M  K  L  T  A  T  *  V  L  A  F  P  I  T  W  Q  F  R  H  R  R  P  A  S  H  L  P  T  L  T   : G  D  K  K  V  S  L  Y  G  R  L  *  G  T  K  R  G  K  T  G  K  K  R  N  G  L  F  T  Q  T  L  L  I  W  I  N  I  V  R  V  R  G  R  M  K  K  *  V  V  V  R  G  T  N  G  N  N  N  C  H  *  S  L  I  M  T  K  Y  *  M  L  G  P  I  K  V  H  F  T  F  S  P  S  P  P  R  L  F  Q  T  S  M  T  I  S  S  P  S  T  C  L  F  R  *  M :   V  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="24" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92003" stop="91561"/>
                    <exon start="91444" stop="91132"/>
                    <exon start="90865" stop="90860"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SELIIIVVIMHMSDAGCRSKNGKSKSRNKVKRRKPKFLSLSVELSEKKPQKSDDRMVSSSNGSTHDHQQLNLFPLHPENLLDDKDSTSTAQDDNVALFFAGAENSATTLNEVLVSSKDEIDSNISTSVPNYMAVSSSEASLTFADTYRGQEGELVRTALRNKERENREEEKWVVYSDVVDLDQHSESTRKDEEVSSCPWNKRQQQLSLKLDYDEILNAWSDKGPLYLQSQSPQIVPDIHDDFLAFDMPFSINGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="95959" PGL_stop="97978"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95959" e_stop="96111"/>
            <exon e_start="96193" e_stop="96557"/>
            <exon e_start="96633" e_stop="97153"/>
            <exon e_start="97490" e_stop="97978"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="95959" e_stop="96111" e_length="153"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96112" i_stop="96192" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96193" e_stop="96557" e_length="365"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96558" i_stop="96632" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96633" e_stop="97153" e_length="521"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="97154" i_stop="97489" i_length="336"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="97490" e_stop="97978" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95959" stop="96111"/>
              <exon start="96193" stop="96557"/>
              <exon start="96633" stop="97153"/>
              <exon start="97490" stop="97851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95983" stop="96111"/>
              <exon start="96193" stop="96554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95993" stop="96111"/>
              <exon start="96193" stop="96424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95993" stop="96111"/>
              <exon start="96193" stop="96371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394094" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95994" stop="96111"/>
              <exon start="96193" stop="96557"/>
              <exon start="96633" stop="96696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96011" stop="96111"/>
              <exon start="96193" stop="96557"/>
              <exon start="96633" stop="96896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96011" stop="96111"/>
              <exon start="96193" stop="96557"/>
              <exon start="96633" stop="96763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96900" stop="97153"/>
              <exon start="97490" stop="97940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425438" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97004" stop="97153"/>
              <exon start="97490" stop="97920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97004" stop="97153"/>
              <exon start="97490" stop="97540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97017" stop="97153"/>
              <exon start="97490" stop="97978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354365" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTACTCAACTCAACACAATATATTCTTTTCTACCCCCACACCATTAAAAATATGTCTACTCTTTTCTTCACATTTTCCCTCCTTCTTCTAGCACCACTACTCGTAATTAGTTCAATCCAAGATCCAGAACTTGTTGTACAAGACGTTCATAG : GAGCATCAATGCGTCATTGACGAGGAGGAATTTGGGCTATTTATCGTGCGGATCAGGGAATCCAATCGATGATTGCTGGCGATGCAACCCCAATTGGGAAAAAAATCGCCAGCGTTTAGCTGATTGCGCCATTGGGTTTGGAAAGAATGCTATCGGAGGAAAAAATGGCCGAATTTACGTGGTTACTGATTCAGGGAACGATGACCCCGTGAACCCTAAACCCGGAACCCTGAGACATGCTGTTATACAAGACGAGCCTTTATGGATTATTTTCAAAAGAGATATGGTCATTCAGCTCAAACAAGAGCTTGTCATGAACTCTTATAAGACCATAGATGGTCGTGGTGCGAGTGTTCACATTTCAG : GTGGTCCGTGCATTACAATCCACCATACCAGCAACATTATAATACACGGGATTAATATACACGATTGTAAACAGAGTGGTAACGGCAACATTAGGGACTCACCAAACCATTCCGGATGGTGGGATGTTTCTGATGGTGATGGTATTTCAATTTTTGGAGGGAAAAACATTTGGGTGGACCATTGTTCGTTGTCTAATTGCCACGACGGTTTAATTGATGCAATTCACGGATCTACAGCAATCACGATATCTAACAACTATTTCACTCATCATGACAAGGTGATGTTGTTGGGACATAGTGATTCTTTTACACAGGACAAAGGCATGCAAGTCACAGTTGCTTTTAATCATTTTGGTGAAGGGTTGGTGCAAAGAATGCCAAGGTGCAGACATGGTTACTTCCATGTGGTTAATAATGACTATACTCACTGGGAAATGTATGCCATTGGTGGTAGTGCTGCACCTACTATTAATAGCCAAGGAAACAGATTTCTTGCTCCCAATGAAAAATACCGCAAAGAG : GTGACAAAGCATGAGGATGCACCAGAAAGTCAGTGGAGAAGCTGGAACTGGAGATCAGAAGGTGATTTGATGTTAAATGGAGCGTATTTCAGGCAAACAGGGGCAGGTGCATCATCATCATCTACTTATGCCAGAGCTTCAAGCTTAAGCGCTAGGCCTTCTTCTTTAGTTGGATCAATTACCACAAATGCCGGTCCTGTTAACTGCAAAAAAGGCTCTCGCTGCTAGTAAATTTAAATCCAGTGGCTACTAAATTTATTTCAAAATGGAGAATGTACGATGACTAGTTGACGATAGTGAAAGAAGTAGTGTTTTAATTAAGCTGAAAATGGTGTACGGAAAATATATGGAGACCATTTCGCAAAACTTATATCTCATCGTTTTCTTTTTCTCAATTTTTCCATGAAAAACTATTACTACTAATTATTGTCATTTGAACGTTTGTTTCTTAATATAGTGACTATCTTGCGTTTTTCCTAATATGTTCCT</gDNA_template>
            <first_frame> F  T  Q  L  N  T  I  Y  S  F  L  P  P  H  H  *  K  Y  V  Y  S  F  L  H  I  F  P  P  S  S  S  T  T  T  R  N  *  F  N  P  R  S  R  T  C  C  T  R  R  S  *  :  E  H  Q  C  V  I  D  E  E  E  F  G  L  F  I  V  R  I  R  E  S  N  R  *  L  L  A  M  Q  P  Q  L  G  K  K  S  P  A  F  S  *  L  R  H  W  V  W  K  E  C  Y  R  R  K  K  W  P  N  L  R  G  Y  *  F  R  E  R  *  P  R  E  P  *  T  R  N  P  E  T  C  C  Y  T  R  R  A  F  M  D  Y  F  Q  K  R  Y  G  H  S  A  Q  T  R  A  C  H  E  L  L  *  D  H  R  W  S  W  C  E  C  S  H  F  R :   W  S  V  H  Y  N  P  P  Y  Q  Q  H  Y  N  T  R  D  *  Y  T  R  L  *  T  E  W  *  R  Q  H  *  G  L  T  K  P  F  R  M  V  G  C  F  *  W  *  W  Y  F  N  F  W  R  E  K  H  L  G  G  P  L  F  V  V  *  L  P  R  R  F  N  *  C  N  S  R  I  Y  S  N  H  D  I  *  Q  L  F  H  S  S  *  Q  G  D  V  V  G  T  *  *  F  F  Y  T  G  Q  R  H  A  S  H  S  C  F  *  S  F  W  *  R  V  G  A  K  N  A  K  V  Q  T  W  L  L  P  C  G  *  *  *  L  Y  S  L  G  N  V  C  H  W  W  *  C  C  T  Y  Y  *  *  P  R  K  Q  I  S  C  S  Q  *  K  I  P  Q  R   : G  D  K  A  *  G  C  T  R  K  S  V  E  K  L  E  L  E  I  R  R  *  F  D  V  K  W  S  V  F  Q  A  N  R  G  R  C  I  I  I  I  Y  L  C  Q  S  F  K  L  K  R  *  A  F  F  F  S  W  I  N  Y  H  K  C  R  S  C  *  L  Q  K  R  L  S  L  L  V  N  L  N  P  V  A  T  K  F  I  S  K  W  R  M  Y  D  D  *  L  T  I  V  K  E  V  V  F  *  L  S  *  K  W  C  T  E  N  I  W  R  P  F  R  K  T  Y  I  S  S  F  S  F  S  Q  F  F  H  E  K  L  L  L  L  I  I  V  I  *  T  F  V  S  *  Y  S  D  Y  L  A  F  F  L  I  C  S  </first_frame>
            <second_frame>  L  L  N  S  T  Q  Y  I  L  F  Y  P  H  T  I  K  N  M  S  T  L  F  F  T  F  S  L  L  L  L  A  P  L  L  V  I  S  S  I  Q  D  P  E  L  V  V  Q  D  V  H  R :   S  I  N  A  S  L  T  R  R  N  L  G  Y  L  S  C  G  S  G  N  P  I  D  D  C  W  R  C  N  P  N  W  E  K  N  R  Q  R  L  A  D  C  A  I  G  F  G  K  N  A  I  G  G  K  N  G  R  I  Y  V  V  T  D  S  G  N  D  D  P  V  N  P  K  P  G  T  L  R  H  A  V  I  Q  D  E  P  L  W  I  I  F  K  R  D  M  V  I  Q  L  K  Q  E  L  V  M  N  S  Y  K  T  I  D  G  R  G  A  S  V  H  I  S   : G  G  P  C  I  T  I  H  H  T  S  N  I  I  I  H  G  I  N  I  H  D  C  K  Q  S  G  N  G  N  I  R  D  S  P  N  H  S  G  W  W  D  V  S  D  G  D  G  I  S  I  F  G  G  K  N  I  W  V  D  H  C  S  L  S  N  C  H  D  G  L  I  D  A  I  H  G  S  T  A  I  T  I  S  N  N  Y  F  T  H  H  D  K  V  M  L  L  G  H  S  D  S  F  T  Q  D  K  G  M  Q  V  T  V  A  F  N  H  F  G  E  G  L  V  Q  R  M  P  R  C  R  H  G  Y  F  H  V  V  N  N  D  Y  T  H  W  E  M  Y  A  I  G  G  S  A  A  P  T  I  N  S  Q  G  N  R  F  L  A  P  N  E  K  Y  R  K  E  :  V  T  K  H  E  D  A  P  E  S  Q  W  R  S  W  N  W  R  S  E  G  D  L  M  L  N  G  A  Y  F  R  Q  T  G  A  G  A  S  S  S  S  T  Y  A  R  A  S  S  L  S  A  R  P  S  S  L  V  G  S  I  T  T  N  A  G  P  V  N  C  K  K  G  S  R  C  *  *  I  *  I  Q  W  L  L  N  L  F  Q  N  G  E  C  T  M  T  S  *  R  *  *  K  K  *  C  F  N  *  A  E  N  G  V  R  K  I  Y  G  D  H  F  A  K  L  I  S  H  R  F  L  F  L  N  F  S  M  K  N  Y  Y  Y  *  L  L  S  F  E  R  L  F  L  N  I  V  T  I  L  R  F  S  *  Y  V  P </second_frame>
            <third_frame>   Y  S  T  Q  H  N  I  F  F  S  T  P  T  P  L  K  I  C  L  L  F  S  S  H  F  P  S  F  F  *  H  H  Y  S  *  L  V  Q  S  K  I  Q  N  L  L  Y  K  T  F  I   : G  A  S  M  R  H  *  R  G  G  I  W  A  I  Y  R  A  D  Q  G  I  Q  S  M  I  A  G  D  A  T  P  I  G  K  K  I  A  S  V  *  L  I  A  P  L  G  L  E  R  M  L  S  E  E  K  M  A  E  F  T  W  L  L  I  Q  G  T  M  T  P  *  T  L  N  P  E  P  *  D  M  L  L  Y  K  T  S  L  Y  G  L  F  S  K  E  I  W  S  F  S  S  N  K  S  L  S  *  T  L  I  R  P  *  M  V  V  V  R  V  F  T  F  Q  :  V  V  R  A  L  Q  S  T  I  P  A  T  L  *  Y  T  G  L  I  Y  T  I  V  N  R  V  V  T  A  T  L  G  T  H  Q  T  I  P  D  G  G  M  F  L  M  V  M  V  F  Q  F  L  E  G  K  T  F  G  W  T  I  V  R  C  L  I  A  T  T  V  *  L  M  Q  F  T  D  L  Q  Q  S  R  Y  L  T  T  I  S  L  I  M  T  R  *  C  C  W  D  I  V  I  L  L  H  R  T  K  A  C  K  S  Q  L  L  L  I  I  L  V  K  G  W  C  K  E  C  Q  G  A  D  M  V  T  S  M  W  L  I  M  T  I  L  T  G  K  C  M  P  L  V  V  V  L  H  L  L  L  I  A  K  E  T  D  F  L  L  P  M  K  N  T  A  K  R :   *  Q  S  M  R  M  H  Q  K  V  S  G  E  A  G  T  G  D  Q  K  V  I  *  C  *  M  E  R  I  S  G  K  Q  G  Q  V  H  H  H  H  L  L  M  P  E  L  Q  A  *  A  L  G  L  L  L  *  L  D  Q  L  P  Q  M  P  V  L  L  T  A  K  K  A  L  A  A  S  K  F  K  S  S  G  Y  *  I  Y  F  K  M  E  N  V  R  *  L  V  D  D  S  E  R  S  S  V  L  I  K  L  K  M  V  Y  G  K  Y  M  E  T  I  S  Q  N  L  Y  L  I  V  F  F  F  S  I  F  P  *  K  T  I  T  T  N  Y  C  H  L  N  V  C  F  L  I  *  *  L  S  C  V  F  P  N  M  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95960" stop="96111"/>
                    <exon start="96193" stop="96557"/>
                    <exon start="96633" stop="97153"/>
                    <exon start="97490" stop="97717"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1263</number_coding_nucleotides>
                  <number_encoded_amino_acids>421</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLNSTQYILFYPHTIKNMSTLFFTFSLLLLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCWRCNPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="-" PGL_start="100159" PGL_stop="99522"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100159" e_stop="99522"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="100159" e_stop="99522" e_length="638"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100159" stop="99522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100085" stop="99552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACTTTTTCCATCAAAAAGAAGAAAAAAAAAATCTAAAAAATAAAAAATTAGTAAAAATGGCTCGTCAAGTTATTGTTTTGGCTCTGGTATTTGTTGCCATTGCTGTATTTGCTTCGGCAGATAATTCCCCAAGCAGTTCCCCTGCTGCATCACCATCCACATCAGCAACAACCCCTGCATCATCACCATCCACATCAGCAACATCCCCTGCATCATCATCCACACCAGCAGCAGCTTCACCAAACAGCGGTAGTGCTAATGCACCTGCTGCCGCACCATCATCCTCTGAATCATCTCCAAAGGCAAGTACCCCATCATCATCATCTCCATCATCATCGTCACCATCCCCATCATCATCAGCATCATCTCCTAAATCTTCAAATTCCGGTTCTGTTTCTTCTTCTTCTTCTCCAACTTCAAGTGCCGAAACTCCGGAAGTAGAACCCGCATCACCACCATCTCCCGACAGCGAAACTGCTACCACTACCGCTCCCGCCACTTCTACACCTGCTGAGGCACCCGCCGCCGACGCCAGTGGCGCAGCTACATTGAAGGCGGTCTCCTCTGTTTTTGCTGCTGCAGTCGCTGCCGCATTCTTCTTCTAATTGATTCATTAATCAATACTATTTTTTAAAA</gDNA_template>
            <first_frame> K  L  F  P  S  K  R  R  K  K  K  S  K  K  *  K  I  S  K  N  G  S  S  S  Y  C  F  G  S  G  I  C  C  H  C  C  I  C  F  G  R  *  F  P  K  Q  F  P  C  C  I  T  I  H  I  S  N  N  P  C  I  I  T  I  H  I  S  N  I  P  C  I  I  I  H  T  S  S  S  F  T  K  Q  R  *  C  *  C  T  C  C  R  T  I  I  L  *  I  I  S  K  G  K  Y  P  I  I  I  I  S  I  I  I  V  T  I  P  I  I  I  S  I  I  S  *  I  F  K  F  R  F  C  F  F  F  F  F  S  N  F  K  C  R  N  S  G  S  R  T  R  I  T  T  I  S  R  Q  R  N  C  Y  H  Y  R  S  R  H  F  Y  T  C  *  G  T  R  R  R  R  Q  W  R  S  Y  I  E  G  G  L  L  C  F  C  C  C  S  R  C  R  I  L  L  L  I  D  S  L  I  N  T  I  F  *   </first_frame>
            <second_frame>  N  F  F  H  Q  K  E  E  K  K  N  L  K  N  K  K  L  V  K  M  A  R  Q  V  I  V  L  A  L  V  F  V  A  I  A  V  F  A  S  A  D  N  S  P  S  S  S  P  A  A  S  P  S  T  S  A  T  T  P  A  S  S  P  S  T  S  A  T  S  P  A  S  S  S  T  P  A  A  A  S  P  N  S  G  S  A  N  A  P  A  A  A  P  S  S  S  E  S  S  P  K  A  S  T  P  S  S  S  S  P  S  S  S  S  P  S  P  S  S  S  A  S  S  P  K  S  S  N  S  G  S  V  S  S  S  S  S  P  T  S  S  A  E  T  P  E  V  E  P  A  S  P  P  S  P  D  S  E  T  A  T  T  T  A  P  A  T  S  T  P  A  E  A  P  A  A  D  A  S  G  A  A  T  L  K  A  V  S  S  V  F  A  A  A  V  A  A  A  F  F  F  *  L  I  H  *  S  I  L  F  F  K  </second_frame>
            <third_frame>   T  F  S  I  K  K  K  K  K  K  I  *  K  I  K  N  *  *  K  W  L  V  K  L  L  F  W  L  W  Y  L  L  P  L  L  Y  L  L  R  Q  I  I  P  Q  A  V  P  L  L  H  H  H  P  H  Q  Q  Q  P  L  H  H  H  H  P  H  Q  Q  H  P  L  H  H  H  P  H  Q  Q  Q  L  H  Q  T  A  V  V  L  M  H  L  L  P  H  H  H  P  L  N  H  L  Q  R  Q  V  P  H  H  H  H  L  H  H  H  R  H  H  P  H  H  H  Q  H  H  L  L  N  L  Q  I  P  V  L  F  L  L  L  L  L  Q  L  Q  V  P  K  L  R  K  *  N  P  H  H  H  H  L  P  T  A  K  L  L  P  L  P  L  P  P  L  L  H  L  L  R  H  P  P  P  T  P  V  A  Q  L  H  *  R  R  S  P  L  F  L  L  L  Q  S  L  P  H  S  S  S  N  *  F  I  N  Q  Y  Y  F  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100158" stop="99553"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFFHQKEEKKNLKNKKLVKMARQVIVLALVFVAIAVFASADNSPSSSPAASPSTSATTPASSPSTSATSPASSSTPAAASPNSGSANAPAAAPSSSESSPKASTPSSSSPSSSSPSPSSSASSPKSSNSGSVSSSSSPTSSAETPEVEPASPPSPDSETATTTAPATSTPAEAPAADASGAATLKAVSSVFAAAVAAAFFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="105245" PGL_stop="105929"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105245" e_stop="105929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="105245" e_stop="105929" e_length="685"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105245" stop="105929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422695" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTTTTTTACCTATTATTATCAGTTCTTCAGTGTTCAGATCATTGTAGATAATAACAACAAGAAGCTATCGATCCGTGTTCTTCAGAGTTCAGATAATTGTAAATAACAGCAACAACTATCTATAGATGTGGAAGAATTTCTCAAAAGTTCTTCAGAATTGCTCTAAAAGCTTCTAAGATGATGGCTTATCTATGTTAGACTGCAACAGTTACACAAAGCCTGACCAATAAATCCCAAACATACATCTCTACTCGGGAGGAAAAAGGTTCATTATTCCTAAAACATGATTTAGCAATCGAAATTGAGCAATATTTTCAACTCAAAATGGCGAGGACATGGGAAAAAGGACTATCTTTCAGTCAGAAACAATTAACATTATGCCGGAAAGGGACATCAAATTTCACCTATGCCTTTGTCTTCCTCCTCAAGCGCTTCCTCAGCTTCTTCAACTTGTGCTTGTTCATCTTCCTCTTCCTCTTTTTCTTCACACTATCCGCCCATATCTTAAGTGAATCTTCTCCTACGACGACGCCTCCATCATTCTCAGATTTAACTACCCCAATTTGAGAAATGGGGTTTAGGAAAACACCGAAAGGGAAACTTGGATAAACCAGTGGGCAAGGGGAAACCTTCTGATTTGGATCCTCTGTTTCGCGTTGGAGACAAAAGGGTATTTGATTTC</gDNA_template>
            <first_frame> L  L  F  Y  L  L  L  S  V  L  Q  C  S  D  H  C  R  *  *  Q  Q  E  A  I  D  P  C  S  S  E  F  R  *  L  *  I  T  A  T  T  I  Y  R  C  G  R  I  S  Q  K  F  F  R  I  A  L  K  A  S  K  M  M  A  Y  L  C  *  T  A  T  V  T  Q  S  L  T  N  K  S  Q  T  Y  I  S  T  R  E  E  K  G  S  L  F  L  K  H  D  L  A  I  E  I  E  Q  Y  F  Q  L  K  M  A  R  T  W  E  K  G  L  S  F  S  Q  K  Q  L  T  L  C  R  K  G  T  S  N  F  T  Y  A  F  V  F  L  L  K  R  F  L  S  F  F  N  L  C  L  F  I  F  L  F  L  F  F  F  T  L  S  A  H  I  L  S  E  S  S  P  T  T  T  P  P  S  F  S  D  L  T  T  P  I  *  E  M  G  F  R  K  T  P  K  G  K  L  G  *  T  S  G  Q  G  E  T  F  *  F  G  S  S  V  S  R  W  R  Q  K  G  I  *  F  </first_frame>
            <second_frame>  F  F  F  T  Y  Y  Y  Q  F  F  S  V  Q  I  I  V  D  N  N  N  K  K  L  S  I  R  V  L  Q  S  S  D  N  C  K  *  Q  Q  Q  L  S  I  D  V  E  E  F  L  K  S  S  S  E  L  L  *  K  L  L  R  *  W  L  I  Y  V  R  L  Q  Q  L  H  K  A  *  P  I  N  P  K  H  T  S  L  L  G  R  K  K  V  H  Y  S  *  N  M  I  *  Q  S  K  L  S  N  I  F  N  S  K  W  R  G  H  G  K  K  D  Y  L  S  V  R  N  N  *  H  Y  A  G  K  G  H  Q  I  S  P  M  P  L  S  S  S  S  S  A  S  S  A  S  S  T  C  A  C  S  S  S  S  S  S  F  S  S  H  Y  P  P  I  S  *  V  N  L  L  L  R  R  R  L  H  H  S  Q  I  *  L  P  Q  F  E  K  W  G  L  G  K  H  R  K  G  N  L  D  K  P  V  G  K  G  K  P  S  D  L  D  P  L  F  R  V  G  D  K  R  V  F  D  F </second_frame>
            <third_frame>   S  F  L  P  I  I  I  S  S  S  V  F  R  S  L  *  I  I  T  T  R  S  Y  R  S  V  F  F  R  V  Q  I  I  V  N  N  S  N  N  Y  L  *  M  W  K  N  F  S  K  V  L  Q  N  C  S  K  S  F  *  D  D  G  L  S  M  L  D  C  N  S  Y  T  K  P  D  Q  *  I  P  N  I  H  L  Y  S  G  G  K  R  F  I  I  P  K  T  *  F  S  N  R  N  *  A  I  F  S  T  Q  N  G  E  D  M  G  K  R  T  I  F  Q  S  E  T  I  N  I  M  P  E  R  D  I  K  F  H  L  C  L  C  L  P  P  Q  A  L  P  Q  L  L  Q  L  V  L  V  H  L  P  L  P  L  F  L  H  T  I  R  P  Y  L  K  *  I  F  S  Y  D  D  A  S  I  I  L  R  F  N  Y  P  N  L  R  N  G  V  *  E  N  T  E  R  E  T  W  I  N  Q  W  A  R  G  N  L  L  I  W  I  L  C  F  A  L  E  T  K  G  Y  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105446" stop="105814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TATVTQSLTNKSQTYISTREEKGSLFLKHDLAIEIEQYFQLKMARTWEKGLSFSQKQLTLCRKGTSNFTYAFVFLLKRFLSFFNLCLFIFLFLFFFTLSAHILSESSPTTTPPSFSDLTTPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="-" PGL_start="106213" PGL_stop="105263"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106213" e_stop="105263"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="106213" e_stop="105263" e_length="951"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106213" stop="105540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106128" stop="105709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106126" stop="105578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106106" stop="105406"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106106" stop="105422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106103" stop="105308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106063" stop="105263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106063" stop="105471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105972" stop="105431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447925" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105943" stop="105284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357603" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCGATCCTGCATGTGGGCAAATATTTATTTTTGAAACTTCGAAGTCTTCCTTTTTGGCAAAACCCTAACGGATGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCTACAATGATCTGAACACTGAAGAACTGATAA</gDNA_template>
            <first_frame> V  R  S  C  M  W  A  N  I  Y  F  *  N  F  E  V  F  L  F  G  K  T  L  T  D  A  I  L  C  Y  S  F  F  L  S  L  F  D  G  S  *  I  V  A  L  N  G  F  N  S  S  E  S  S  E  E  P  I  S  I  F  H  N  K  N  H  H  *  P  *  *  I  R  T  G  N  P  Q  F  Y  L  S  S  T  T  N  L  G  S  S  F  L  *  Q  T  K  S  N  T  L  L  S  P  T  R  N  R  G  S  K  S  E  G  F  P  L  P  T  G  L  S  K  F  P  F  R  C  F  P  K  P  H  F  S  N  W  G  S  *  I  *  E  *  W  R  R  R  R  R  R  R  F  T  *  D  M  G  G  *  C  E  E  K  E  E  E  E  D  E  Q  A  Q  V  E  E  A  E  E  A  L  E  E  E  D  K  G  I  G  E  I  *  C  P  F  P  A  *  C  *  L  F  L  T  E  R  *  S  F  F  P  C  P  R  H  F  E  L  K  I  L  L  N  F  D  C  *  I  M  F  *  E  *  *  T  F  F  L  P  S  R  D  V  C  L  G  F  I  G  Q  A  L  C  N  C  C  S  L  T  *  I  S  H  H  L  R  S  F  *  S  N  S  E  E  L  L  R  N  S  S  T  S  I  D  S  C  C  C  Y  L  Q  L  S  E  L  *  R  T  R  I  D  S  F  L  L  L  L  S  T  M  I  *  T  L  K  N  *  * </first_frame>
            <second_frame>  F  D  P  A  C  G  Q  I  F  I  F  E  T  S  K  S  S  F  L  A  K  P  *  R  M  Q  F  S  V  I  L  S  F  F  L  F  L  M  V  L  E  L  L  H  *  M  A  S  I  L  R  K  A  L  R  N  Q  F  Q  S  S  T  T  R  I  I  T  N  L  N  K  S  E  P  A  I  L  S  S  T  S  P  Q  P  P  I  L  A  H  P  S  C  S  R  R  N  Q  I  P  F  C  L  Q  R  E  T  E  D  P  N  Q  K  V  S  P  C  P  L  V  Y  P  S  F  P  F  G  V  F  L  N  P  I  S  Q  I  G  V  V  K  S  E  N  D  G  G  V  V  V  G  E  D  S  L  K  I  W  A  D  S  V  K  K  K  R  K  R  K  M  N  K  H  K  L  K  K  L  R  K  R  L  R  R  K  T  K  A  *  V  K  F  D  V  P  F  R  H  N  V  N  C  F  *  L  K  D  S  P  F  S  H  V  L  A  I  L  S  *  K  Y  C  S  I  S  I  A  K  S  C  F  R  N  N  E  P  F  S  S  R  V  E  M  Y  V  W  D  L  L  V  R  L  C  V  T  V  A  V  *  H  R  *  A  I  I  L  E  A  F  R  A  I  L  K  N  F  *  E  I  L  P  H  L  *  I  V  V  A  V  I  Y  N  Y  L  N  S  E  E  H  G  S  I  A  S  C  C  Y  Y  L  Q  *  S  E  H  *  R  T  D   </second_frame>
            <third_frame>   S  I  L  H  V  G  K  Y  L  F  L  K  L  R  S  L  P  F  W  Q  N  P  N  G  C  N  S  L  L  F  F  L  S  F  S  F  *  W  F  L  N  C  C  T  K  W  L  Q  F  F  G  K  L  *  G  T  N  F  N  L  P  Q  Q  E  S  S  L  T  L  I  N  P  N  R  Q  S  S  V  L  P  L  L  N  H  Q  S  W  L  I  L  L  V  A  D  E  I  K  Y  P  F  V  S  N  A  K  Q  R  I  Q  I  R  R  F  P  L  A  H  W  F  I  Q  V  S  L  S  V  F  S  *  T  P  F  L  K  L  G  *  L  N  L  R  M  M  E  A  S  S  *  E  K  I  H  L  R  Y  G  R  I  V  *  R  K  R  G  R  G  R  *  T  S  T  S  *  R  S  *  G  S  A  *  G  G  R  Q  R  H  R  *  N  L  M  S  L  S  G  I  M  L  I  V  S  D  *  K  I  V  L  F  P  M  S  S  P  F  *  V  E  N  I  A  Q  F  R  L  L  N  H  V  L  G  I  M  N  L  F  P  P  E  *  R  C  M  F  G  I  Y  W  S  G  F  V  *  L  L  Q  S  N  I  D  K  P  S  S  *  K  L  L  E  Q  F  *  R  T  F  E  K  F  F  H  I  Y  R  *  L  L  L  L  F  T  I  I  *  T  L  K  N  T  D  R  *  L  L  V  V  I  I  Y  N  D  L  N  T  E  E  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106077" stop="105652"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MASILRKALRNQFQSSTTRIITNLNKSEPAILSSTSPQPPILAHPSCSRRNQIPFCLQRETEDPNQKVSPCPLVYPSFPFGVFLNPISQIGVVKSENDGGVVVGEDSLKIWADSVKKKRKRKMNKHKLKKLRKRLRRKTKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="+" PGL_start="106768" PGL_stop="107155"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106768" e_stop="107155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="106768" e_stop="107155" e_length="388"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106768" stop="107155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E621866" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATGTTACACAATAATATACCCAGGTTTACTACAAATTGAATTTAATTACAATGTATGAATACAAATTTATTCATGCACTGGTTTAAAGTTTCTGTAAGCTATAACTGCGTAAAAAGGATCCGATGAAGCTGATAACAACCCAATCAACTGCATTATTTTACTGAGAGGTGATTTATTTTGTTGATCATCATTAGTTGGTAATTTACGAATCACTTGTGGCTCTGTAAATCCCTTAATACATTGAAAATATTGTACCACAAGTTGCACTCTCCCGTATCCTGTACTGTCCCTCCAGGCACTAATTGCTTTATCGTAGAACAATCTGTTACTGAAACTTACAATAAACACTCCTCCAGGTCTTAGAATTCGAAATACTTCCGCGAAAA</gDNA_template>
            <first_frame> K  C  Y  T  I  I  Y  P  G  L  L  Q  I  E  F  N  Y  N  V  *  I  Q  I  Y  S  C  T  G  L  K  F  L  *  A  I  T  A  *  K  G  S  D  E  A  D  N  N  P  I  N  C  I  I  L  L  R  G  D  L  F  C  *  S  S  L  V  G  N  L  R  I  T  C  G  S  V  N  P  L  I  H  *  K  Y  C  T  T  S  C  T  L  P  Y  P  V  L  S  L  Q  A  L  I  A  L  S  *  N  N  L  L  L  K  L  T  I  N  T  P  P  G  L  R  I  R  N  T  S  A  K  </first_frame>
            <second_frame>  N  V  T  Q  *  Y  T  Q  V  Y  Y  K  L  N  L  I  T  M  Y  E  Y  K  F  I  H  A  L  V  *  S  F  C  K  L  *  L  R  K  K  D  P  M  K  L  I  T  T  Q  S  T  A  L  F  Y  *  E  V  I  Y  F  V  D  H  H  *  L  V  I  Y  E  S  L  V  A  L  *  I  P  *  Y  I  E  N  I  V  P  Q  V  A  L  S  R  I  L  Y  C  P  S  R  H  *  L  L  Y  R  R  T  I  C  Y  *  N  L  Q  *  T  L  L  Q  V  L  E  F  E  I  L  P  R  K </second_frame>
            <third_frame>   M  L  H  N  N  I  P  R  F  T  T  N  *  I  *  L  Q  C  M  N  T  N  L  F  M  H  W  F  K  V  S  V  S  Y  N  C  V  K  R  I  R  *  S  *  *  Q  P  N  Q  L  H  Y  F  T  E  R  *  F  I  L  L  I  I  I  S  W  *  F  T  N  H  L  W  L  C  K  S  L  N  T  L  K  I  L  Y  H  K  L  H  S  P  V  S  C  T  V  P  P  G  T  N  C  F  I  V  E  Q  S  V  T  E  T  Y  N  K  H  S  S  R  S  *  N  S  K  Y  F  R  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="30" PGL_strand="-" PGL_start="107933" PGL_stop="106911"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107933" e_stop="107326"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="107933" e_stop="107326" e_length="608"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107933" stop="107326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAA</gDNA_template>
            <first_frame> P  S  Q  D  M  E  I  P  K  L  T  L  V  S  S  S  I  Q  N  Q  N  T  A  L  N  N  N  N  S  K  S  L  *  *  *  R  *  Q  F  N  S  R  K  N  Q  T  N  G  T  Y  S  T  R  K  N  Q  T  K  H  F  T  R  Q  G  I  L  C  L  S  K  I  R  H  T  R  R  *  S  F  H  F  Q  F  N  R  S  L  Q  V  T  V  S  K  L  S  S  N  M  L  L  I  N  L  T  P  L  R  C  F  Y  R  K  C  L  K  P  E  F  E  I  L  D  L  M  S  S  W  V  S  H  L  P  Q  E  V  K  Y  K  K  V  V  G  H  G  L  N  A  Q  E  L  A  K  N  P  K  L  D  Y  F  F  V  R  D  L  N  E  D  E  K  F  E  F  E  N  C  S  F  D  A  V  L  C  T  V  S  V  Q  Y  L  Q  Q  P  E  K  V  T  *  L  D  D  K  E   </first_frame>
            <second_frame>  H  P  K  T  W  K  S  P  N  L  H  L  F  P  L  P  S  K  T  K  T  Q  P  S  I  I  I  T  P  K  A  Y  N  N  E  D  N  N  S  T  A  G  K  I  K  R  M  V  L  T  Q  Q  G  R  T  K  L  N  I  L  P  D  K  E  F  Y  A  Y  P  R  F  V  T  H  V  D  D  R  F  I  S  N  L  T  D  L  Y  R  *  R  C  Q  N  *  V  Q  I  C  Y  *  L  I  *  L  P  C  A  V  F  I  G  N  V  *  N  L  N  L  K  F  L  T  L  *  A  H  G  S  V  I  Y  H  K  K  *  S  T  K  R  W  L  V  M  D  L  M  P  K  S  *  Q  K  I  P  N  W  I  I  S  L  *  G  I  *  M  K  M  R  N  L  S  L  K  I  V  V  L  M  L  F  Y  A  L  S  V  C  S  I  F  N  S  L  R  R  *  L  N  *  M  I  K  R  </second_frame>
            <third_frame>   I  P  R  H  G  N  P  Q  T  Y  T  C  F  L  F  H  P  K  P  K  H  S  P  Q  *  *  *  L  Q  K  P  I  I  M  K  I  T  I  Q  Q  Q  E  K  S  N  E  W  Y  L  L  N  K  E  E  P  N  *  T  F  Y  Q  T  R  N  F  M  P  I  Q  D  S  S  H  T  S  M  I  V  S  F  P  I  *  P  I  F  T  G  N  G  V  K  I  K  F  K  Y  V  I  D  *  F  D  S  P  A  L  F  L  *  E  M  F  E  T  *  I  *  N  S  *  P  Y  E  L  M  G  Q  S  F  T  T  R  S  E  V  Q  K  G  G  W  S  W  T  *  C  P  R  A  S  K  K  S  Q  I  G  L  F  L  C  E  G  F  E  *  R  *  E  I  *  V  *  K  L  *  F  *  C  C  F  M  H  C  Q  C  A  V  S  S  T  A  *  E  G  N  L  I  R  *  *  R  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107702" stop="107343"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFHFQFNRSLQVTVSKLSSNMLLINLTPLRCFYRKCLKPEFEILDLMSSWVSHLPQEVKYKKVVGHGLNAQELAKNPKLDYFFVRDLNEDEKFEFENCSFDAVLCTVSVQYLQQPEKVT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="107706" e_stop="107670"/>
            <exon e_start="107601" e_stop="107249"/>
            <exon e_start="107156" e_stop="107140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.506" acc_prob="0.999" e_score="0.997"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107706" e_stop="107670" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.845">
            <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="107601" e_stop="107249" e_length="353"/>
          </exon>
          <intron i_serial="2" don_prob="0.506" acc_prob="0.999">
            <gDNA_intron_boundary i_start="107248" i_stop="107157" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107156" e_stop="107140" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107706" stop="107670"/>
              <exon start="107601" stop="107249"/>
              <exon start="107156" stop="107140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341643" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG : GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAGTGATAAG : GTTTTCGCGGAAGTATT</gDNA_template>
            <first_frame> M  I  V  S  F  P  I  *  P  I  F  T   : G  N  V  *  N  L  N  L  K  F  L  T  L  *  A  H  G  S  V  I  Y  H  K  K  *  S  T  K  R  W  L  V  M  D  L  M  P  K  S  *  Q  K  I  P  N  W  I  I  S  L  *  G  I  *  M  K  M  R  N  L  S  L  K  I  V  V  L  M  L  F  Y  A  L  S  V  C  S  I  F  N  S  L  R  R  *  L  N  *  M  I  K  R  I  K  C  H  H  N  H  I  N  I  V  A  K  M  C  G  W  L  *  A  K  Q  Y  S  D  K  :  V  F  A  E  V   </first_frame>
            <second_frame>  *  S  F  H  F  Q  F  N  R  S  L  Q  :  E  M  F  E  T  *  I  *  N  S  *  P  Y  E  L  M  G  Q  S  F  T  T  R  S  E  V  Q  K  G  G  W  S  W  T  *  C  P  R  A  S  K  K  S  Q  I  G  L  F  L  C  E  G  F  E  *  R  *  E  I  *  V  *  K  L  *  F  *  C  C  F  M  H  C  Q  C  A  V  S  S  T  A  *  E  G  N  L  I  R  *  *  R  E  S  S  V  T  T  T  T  *  T  L  L  Q  K  C  V  V  G  Y  K  P  N  N  I  V  I  R :   F  S  R  K  Y  </second_frame>
            <third_frame>   D  R  F  I  S  N  L  T  D  L  Y  R :   K  C  L  K  P  E  F  E  I  L  D  L  M  S  S  W  V  S  H  L  P  Q  E  V  K  Y  K  K  V  V  G  H  G  L  N  A  Q  E  L  A  K  N  P  K  L  D  Y  F  F  V  R  D  L  N  E  D  E  K  F  E  F  E  N  C  S  F  D  A  V  L  C  T  V  S  V  Q  Y  L  Q  Q  P  E  K  V  T  *  L  D  D  K  E  N  Q  V  S  P  Q  P  H  K  H  C  C  K  N  V  W  L  V  I  S  Q  T  I  *  *  *   : G  F  R  G  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="30" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107704" stop="107670"/>
                    <exon start="107601" stop="107343"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRFISNLTDLYRKCLKPEFEILDLMSSWVSHLPQEVKYKKVVGHGLNAQELAKNPKLDYFFVRDLNEDEKFEFENCSFDAVLCTVSVQYLQQPEKVT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="107928" e_stop="107670"/>
            <exon e_start="107601" e_stop="107352"/>
            <exon e_start="107156" e_stop="106911"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.626" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107928" e_stop="107670" e_length="259"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.845">
            <gDNA_intron_boundary i_start="107669" i_stop="107602" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107601" e_stop="107352" e_length="250"/>
          </exon>
          <intron i_serial="2" don_prob="0.626" acc_prob="0.999">
            <gDNA_intron_boundary i_start="107351" i_stop="107157" i_length="195"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="107156" e_stop="106911" e_length="246"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107928" stop="107670"/>
              <exon start="107601" stop="107352"/>
              <exon start="107156" stop="106911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339914" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG : GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG : GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAAATAATGCAGTTGATT</gDNA_template>
            <first_frame> P  R  H  G  N  P  Q  T  Y  T  C  F  L  F  H  P  K  P  K  H  S  P  Q  *  *  *  L  Q  K  P  I  I  M  K  I  T  I  Q  Q  Q  E  K  S  N  E  W  Y  L  L  N  K  E  E  P  N  *  T  F  Y  Q  T  R  N  F  M  P  I  Q  D  S  S  H  T  S  M  I  V  S  F  P  I  *  P  I  F  T   : G  N  V  *  N  L  N  L  K  F  L  T  L  *  A  H  G  S  V  I  Y  H  K  K  *  S  T  K  R  W  L  V  M  D  L  M  P  K  S  *  Q  K  I  P  N  W  I  I  S  L  *  G  I  *  M  K  M  R  N  L  S  L  K  I  V  V  L  M  L  F  Y  A  L  S  V  C  S  I  F  N  S  L  R  R :   F  S  R  K  Y  F  E  F  *  D  L  E  E  C  L  L  *  V  S  V  T  D  C  S  T  I  K  Q  L  V  P  G  G  T  V  Q  D  T  G  E  C  N  L  W  Y  N  I  F  N  V  L  R  D  L  Q  S  H  K  *  F  V  N  Y  Q  L  M  M  I  N  K  I  N  H  L  S  V  K  *  C  S  *   </first_frame>
            <second_frame>  Q  D  M  E  I  P  K  L  T  L  V  S  S  S  I  Q  N  Q  N  T  A  L  N  N  N  N  S  K  S  L  *  *  *  R  *  Q  F  N  S  R  K  N  Q  T  N  G  T  Y  S  T  R  K  N  Q  T  K  H  F  T  R  Q  G  I  L  C  L  S  K  I  R  H  T  R  R  *  S  F  H  F  Q  F  N  R  S  L  Q  :  E  M  F  E  T  *  I  *  N  S  *  P  Y  E  L  M  G  Q  S  F  T  T  R  S  E  V  Q  K  G  G  W  S  W  T  *  C  P  R  A  S  K  K  S  Q  I  G  L  F  L  C  E  G  F  E  *  R  *  E  I  *  V  *  K  L  *  F  *  C  C  F  M  H  C  Q  C  A  V  S  S  T  A  *  E   : G  F  R  G  S  I  S  N  S  K  T  W  R  S  V  Y  C  K  F  Q  *  Q  I  V  L  R  *  S  N  *  C  L  E  G  Q  Y  R  I  R  E  S  A  T  C  G  T  I  F  S  M  Y  *  G  I  Y  R  A  T  S  D  S  *  I  T  N  *  *  *  S  T  K  *  I  T  S  Q  *  N  N  A  V  D  </second_frame>
            <third_frame>   K  T  W  K  S  P  N  L  H  L  F  P  L  P  S  K  T  K  T  Q  P  S  I  I  I  T  P  K  A  Y  N  N  E  D  N  N  S  T  A  G  K  I  K  R  M  V  L  T  Q  Q  G  R  T  K  L  N  I  L  P  D  K  E  F  Y  A  Y  P  R  F  V  T  H  V  D  D  R  F  I  S  N  L  T  D  L  Y  R :   K  C  L  K  P  E  F  E  I  L  D  L  M  S  S  W  V  S  H  L  P  Q  E  V  K  Y  K  K  V  V  G  H  G  L  N  A  Q  E  L  A  K  N  P  K  L  D  Y  F  F  V  R  D  L  N  E  D  E  K  F  E  F  E  N  C  S  F  D  A  V  L  C  T  V  S  V  Q  Y  L  Q  Q  P  E  K  :  V  F  A  E  V  F  R  I  L  R  P  G  G  V  F  I  V  S  F  S  N  R  L  F  Y  D  K  A  I  S  A  W  R  D  S  T  G  Y  G  R  V  Q  L  V  V  Q  Y  F  Q  C  I  K  G  F  T  E  P  Q  V  I  R  K  L  P  T  N  D  D  Q  Q  N  K  S  P  L  S  K  I  M  Q  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0072B02.3" strand="-"/>
                <serials PGL_serial="30" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107926" stop="107670"/>
                    <exon start="107601" stop="107352"/>
                    <exon start="107156" stop="106911"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>753</number_coding_nucleotides>
                  <number_encoded_amino_acids>251</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTWKSPNLHLFPLPSKTKTQPSIIITPKAYNNEDNNSTAGKIKRMVLTQQGRTKLNILPDKEFYAYPRFVTHVDDRFISNLTDLYRKCLKPEFEILDLMSSWVSHLPQEVKYKKVVGHGLNAQELAKNPKLDYFFVRDLNEDEKFEFENCSFDAVLCTVSVQYLQQPEKVFAEVFRILRPGGVFIVSFSNRLFYDKAISAWRDSTGYGRVQLVVQYFQCIKGFTEPQVIRKLPTNDDQQNKSPLSKIMQLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="31" PGL_strand="+" PGL_start="107322" PGL_stop="107768"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107322" e_stop="107768"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107322" e_stop="107768" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107322" stop="107768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107322" stop="107743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206647" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="31" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTG</gDNA_template>
            <first_frame> L  I  L  F  I  I  *  L  S  Y  L  L  R  L  L  K  I  L  H  T  D  S  A  *  N  S  I  K  T  T  I  F  K  L  K  F  L  I  F  I  Q  I  P  H  K  E  I  I  Q  F  G  I  F  C  *  L  L  G  I  K  S  M  T  N  H  L  F  V  L  H  F  L  W  *  M  T  D  P  *  A  H  K  V  K  N  F  K  F  R  F  Q  T  F  P  I  K  T  A  Q  G  S  Q  I  N  Q  *  H  I  *  T  *  F  *  H  R  Y  L  *  R  S  V  K  L  E  M  K  R  S  S  T  C  V  T  N  L  G  *  A  *  N  S  L  S  G  K  M  F  S  L </first_frame>
            <second_frame>  *  F  S  L  S  S  N  *  V  T  F  S  G  C  *  R  Y  C  T  L  T  V  H  K  T  A  S  K  L  Q  F  S  N  S  N  F  S  S  S  F  K  S  L  T  K  K  *  S  N  L  G  F  F  A  S  S  W  A  L  S  P  *  P  T  T  F  L  Y  F  T  S  C  G  K  *  L  T  H  E  L  I  R  S  R  I  S  N  S  G  F  K  H  F  L  *  K  Q  R  R  G  V  K  L  I  N  N  I  F  E  L  N  F  D  T  V  T  C  K  D  R  L  N  W  K  *  N  D  H  R  R  V  *  R  I  L  D  R  H  K  I  P  C  L  V  K  C  L  V   </second_frame>
            <third_frame>   D  S  L  Y  H  L  I  K  L  P  S  Q  A  V  E  D  T  A  H  *  Q  C  I  K  Q  H  Q  N  Y  N  F  Q  T  Q  I  S  H  L  H  S  N  P  S  Q  R  N  N  P  I  W  D  F  L  L  A  L  G  H  *  V  H  D  Q  P  P  F  C  T  S  L  L  V  V  N  D  *  P  M  S  S  *  G  Q  E  F  Q  I  Q  V  S  N  I  S  Y  K  N  S  A  G  E  S  N  *  S  I  T  Y  L  N  L  I  L  T  P  L  P  V  K  I  G  *  I  G  N  E  T  I  I  D  V  C  D  E  S  W  I  G  I  K  F  L  V  W  *  N  V  *  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0072B02.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 371 chains have been computed
$ 
$ memory statistics:
$ 684944 bytes spliced alignments in total
$ 264 spliced alignments have been stored
$ 2594 bytes was the average size of a spliced alignment
$ 47152 bytes predicted gene locations in total
$ 31 predicted gene locations have been stored
$ 1521 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 395 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 22:44:34
-->
