<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:46:49"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565327" ref_strand="+" ref_description="SGN-U565327 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|15239023|ref|NP_199671.1| (e_value=2e-74) chromosome condensation protein [Arabidopsis thaliana]; (*ATH) AT5G48600.1 (e_value=1e-76)  Symbol: None | structural maintenance of chromosomes (SMC) family protein, similar to SP:P50532 Chromosome assembly protein XCAP-C {Xenopus laevis}; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal doma... ; (*SWP) sp|Q9FJL0|SMC4_ARATH (e_value=1e-75) Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana GN=SMC4; ">
      <seq>cggccggcacatctatccgtgctgctagcgtttcaccagaggctatatctgctgctgaaaatgaactttcacagatcgccggaaacttggataatgtacgccaaagaattactgatgctgtgaagtgttaccaggcctcaaagaaggctctttctcttggcgagatggaattagccaaatgcaaaaaagagattgatagcctgaagtcccaatgcgatgatctaaaaaagcaactggattccttgagaagtgcatcaaaacccagtaaggatgaagttaatagattgaaggaactcaagaaaatcatttcggctgaaaaaaaagaaatggacaggcttacacagggttcaaaacagctgaaagagaaggcttcaaaacttcaaaataaaatagagaatgcaggtggcgagcaattgaaaaatcagaaggcaaaggttactaaaatacaatctgatattgataaaaagagcacagagatcaaccgtcgtaaggttcagattgaaacaggacagaaaatgattaaaaaactgacaaaggggattgaggaatcaaacaaagagaaggaaaatcttcttgctgagaaggagaagttactttccatcttcaaagaggtcgaacagaaagcttttactgttcaagaggactataaaaagatacaggagctcattgatcagcacaaaggtattctgattgatgctaaaaatgaatatgaaaatttgaagaagactatggatgagatgcggtcatcagaggtagatgctgaatacaagttacaagatatgaagaaggtttataaagatttggaactcaaagggaaaggatacaagaaaaaactcgatgatttgcatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="1909" stop="3846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2204" g_stop="2394" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2395" i_stop="2511" i_length="117">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2512" g_stop="2688" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="368" r_length="177" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.413" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2798" g_stop="2881" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="452" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2959" g_stop="3168" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="662" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3284" g_stop="3373" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="752" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3374" i_stop="3446" i_length="73">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.786" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3447" g_stop="3546" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="753" r_stop="852" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U565327" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2204" e_stop="2394"/>
          <exon e_start="2512" e_stop="2688"/>
          <exon e_start="2798" e_stop="2881"/>
          <exon e_start="2959" e_stop="3168"/>
          <exon e_start="3284" e_stop="3373"/>
          <exon e_start="3447" e_stop="3546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGGCACATCTATCCGTGCTGCTAGCGTTTCACCAGAGGCTATATCTGCTGCTGAAAATGAACTTTCACAGATCGCCGGAAACTTGGATAATGTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCTCTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAGGTCTGACATTCATGTTTTATTGATGTTATTTGCAATTCTTTTCTATGACTATTTTTAATCTCTTTTAACGCTTGTCTTGCACCATGAGAGCTAAATGCTTTTTTGGTTTCTGTACAGATTGATAGCCTGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAGGTGATCACATGTCTAGCAGTTTATCCTTTTCTTAAGACCATTTTATTATTAAGTTCAAGAGAAGCTAGCTCCAAAGGCTGTTTCAAAATCCAGTGTTTTATGTCTTCAGGCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGTAAGTGGAAAACTGACGCTTGTGCATGCTAAGTTTATGTGCTTTACTGTTAACACACTTTTTTTGCTCCACCGTAGGATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAGGTTTGTACCATTATTTCATGTTAAGATGTGCATCATATGATTGTGCAAGTTGCTTCAATTGTTTCGGCAAATTTCTTTTTTTTTTTCTAATGTTTTTGTGTTAATGATTTTTTAGCTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTTCTATGGCACTCATTTGACATTTTTTCTTCCTTCCATTTATATATGTAATCTAATGCAAGTGGAGCTGCAGGTAGATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAGGATACAAGAAAAAACTCGATGATTTGCATACTG</genome_strand>
        <mrna_strand>CGGCCGGCACATCTATCCGTGCTGCTAGCGTTTCACCAGAGGCTATATCTGCTGCTGAAAATGAACTTTCACAGATCGCCGGAAACTTGGATAATGTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAAAGAAGGCTCTTTCTCTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAG.....................................................................................................................ATTGATAGCCTGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAAAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAAAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAG.............................................................................................................GCTTCAAAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCT.............................................................................GATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAG...................................................................................................................CTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAG.........................................................................GTAGATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAGGATACAAGAAAAAACTCGATGATTTGCATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565834" ref_strand="+" ref_description="SGN-U565834 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157332894|emb|CAO15461.1| (e_value=2e-116) unnamed; (*ATH) AT5G48600.1 (e_value=2e-116)  Symbol: None | structural maintenance of chromosomes (SMC) family protein, similar to SP:P50532 Chromosome assembly protein XCAP-C {Xenopus laevis}; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal doma... ; (*SWP) sp|Q9FJL0|SMC4_ARATH (e_value=2e-115) Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana GN=SMC4; ">
      <seq>cttcaggcaactctaagtgatgttactcttggtcaaacttgtgatcttaagacagctcttgagacagtttcacttctagagtctcaactcaaagagatgaacccaaatcttgactcgatttctgagtatcggaaaaaagtatctgtgtacaatgaaagagttcaagagcttaattctgttactttagagcgtgatgatattaaaaaacaatatgatgagtggagaaagagaaggttggatgagttcatggagggctttaataccatatctttgaaacttaaagaaatgtatcagatgatcacccttggaggcgacgcagaactggaattggtggattctcttgatccgttttctgaaggtgttgttttcagtgttagacctccaaagaagagctggaagaatattgctaacttatcaggtggtgaaaagaccctcagctcattggctcttgtttttgcactccaccactataaacccactccactttatgtgatggatgagattgatgctgctttagattttaagaatgtctcgatcgttgggcattatgtgaaggacagaactaaagatgcacagttcataatcataagccttagaaacaatatgtttgagctagcagatcggctagttggtatctacaaaacagataactgcaccaagagcattactatcaatcctggaagctttgtagtttctcaaaaagctgcttgaggctgttccagaatttctgatcactttcttttatcttccctgtgctgacaagaatctggttgattaacaccttaagctaacatggtgagttctgtattttgttggaagtcattgtaatatgtatagttcatctaatgagttacggaatacttacagatatgataaatgaaagtttgtgtttgtagttaatggctactttctattagaatatatttttaaacacattggggacagtcaaatttttgatgttgcacaacactaatgggagtatttctgagtgtcacgatttcaattttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="3445" stop="6253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3745" g_stop="3869" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3870" i_stop="3955" i_length="86">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.851" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3956" g_stop="4063" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="233" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4131" g_stop="4191" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="294" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4975" g_stop="5109" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="429" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5198" g_stop="5285" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="517" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5377" g_stop="5449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="590" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="5533" g_stop="5953" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="1011" r_length="421" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U565834" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1011</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3745" e_stop="3869"/>
          <exon e_start="3956" e_stop="4063"/>
          <exon e_start="4131" e_stop="4191"/>
          <exon e_start="4975" e_stop="5109"/>
          <exon e_start="5198" e_stop="5285"/>
          <exon e_start="5377" e_stop="5449"/>
          <exon e_start="5533" e_stop="5953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCAGGCAACTCTAAGTGATGTTACTCTTGGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAGAGATGAACCCAAATCTTGACTCGATTTCTGAGTAAGCTCTTGTACTCATTTATAGAGAAGCTTGTAGCATGACTATGTTTCTTGATATTAATTGCTAATAGTCTCTACTGTCACTAGGTATCGGAAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAGGTAAGTTTCGTCCATCCTACAACCTAGATTTCTCTCTTCCATATGCCAGCTCACAACATCTCTGTAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAGGTATTCAGCTCATTTTTTGACTTGTTTTTTATATGAAAGCTTTCCCCATATAATACTAGAGTTGAATTTCATCTGGATCAGTGATTATGCCATTTATAATTTTAGGTGTAGAGGAGTGAAGTGTGCTTTAGCAAAGATAGTAGGGTATATATTTTGTTTTCTTTTTTTTGTCTCCCACTGAGTTCTGAACTTGAGATCTTAGGGCTCAACCACTTTATGGACCACTAGGCCACACCCTTGGGTGTGATTGTTTCCTGTTCTTAATCCTGTAGTTGCATGTATCAGGTATTCAGCTCCTTTTTGACTTGTTTTCTTATATTAAAGTTTTTCCCATCTAGTACTCGAGTTTAATTTCTTCTGGGTAAGTGATTATGTCACTTTATATTGTACATCATCCTGATTGTTTTCCTTTTATTAATCCTGTAGTCGGGCATCTTCTTCTTATTTCTTGTCATGTCTGATTTGGTTTTTTGCTCATATTTCTGGTGCATGGACTGCTTTGTTTAAAAATTGGGATTATGTTGTGTGCCAAAAAAGATATTTTCACTTCAAATTTCTTTCCATGTTATGAAAAAGCAAATATGTTGATGGTTATCCTTCTGGGTTTTGGGGACTCTTTTAGTTCATGATATACAACCGGTTAACCATTTATAAGTAAAAGAACGTTTTAAATAAAATAGCAAATTGTTATTAAAAAAATAAAAAAGCAAATTGTAAAGTTATTACCTGCATGAAATATACCCCTTTATTAATAGTGTATTACTTCTTTTGGTAATCTCCCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGGTGAGTGTCAAGAGTGGCTATATGTTTGTATGTTACTGAAAACATTATATCAAAGCAATCCGGTCTCTAATAGCAATGTTAATTTCAGACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAGGTATGTTCTTTTTCTGCTTATTACATTTGGCTAACAAAGATCAAGCTCCCAATATTTCATGCTTTCTTTGTGGTTTCCTTGTATGTCACAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAGGTACTGCATTGGCGTATGTCCGATTCAAAGAAACAAGCACTAAGAAGCTATAGTTATCTAATTTTTGTTTTAATGATATGCAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAAATTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTT</genome_strand>
        <mrna_strand>CTTCAGGCAACTCTAAGTGATGTTACTCTTGGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAGAGATGAACCCAAATCTTGACTCGATTTCTGA......................................................................................GTATCGGAAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAG...................................................................GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG........................................................................................ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAG...........................................................................................ATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG...................................................................................CCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAATTTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575014" ref_strand="+" ref_description="SGN-U575014 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345696|emb|CAO14994.1| (e_value=5e-101) unnamed; (*ATH) AT5G39785.1 (e_value=3e-36) | Symbol: None | expressed protein | chr5:15946416-15949502 FORWARD | Aliases: AT5G39780; ">
      <seq>gtgcagaggaagaagtagatttgttatacaagaagtatgctgaaagaatgagctggtttgatgttctcaatcatgaaaggctatgtgccttaaatgcagtattgaggaagcacttgtcaagtccaaattcatttgagtatgaaatggagcctacagttggtttgcctgtccaatatagttcattgaacaaaatggatagaaaaagacttgtgaggaacttagagagtgatttggagttggtttatgtggcacaatcatgtttatcatgggaagcacttcatcatcagtataaaaaagtaaaggctctttgtggttcaacttcaaaaaatggggtcttttatggtaatgtagcagcaagatttcagaaattccaagtattgctagaaagatttgtggaagatgatagctgtggaggcaaaaggcatttgaattatgttcatacaagattttcccaaaagaatctcctccaagttccagagatttctggatacgtagaatcaaatgaaagagtggatggagaaataatgaagccaatagaagtgctaaaggccattgagaaatgcatatatgctttttggttttatgtaagaagagattgcaagaaaaagaagaattttttgtggagtcaatctcgtgttgaagaccccagagacatactgttcctgcctgacttgactaggaaacttcaaatgaaagagttatggatgaaggatgtgaaaggtaagagaaaatgttggcttagaagagcaaaaaagggtgaacaagaagagttgaacaaaatagagttagtgttgacattgatagagatgaagctggtatcaaggattctccatatgtccattatttctacatctcatttcaaatggtgccaacaaaagctagataatatagagttcaaaaatggtcacattttaaggagcccaactatcctaccgctgtttccatcttgattagatcacatcaaattttctttttatttagaaaattagattgtatatagttaagcatacttgttcttcttctacaaagagtgcacgcatgtcatgtaaatctattacaattagcttcttcttttgggatagccatatcaatgacaaaaataaattttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="8004" stop="11212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8304" g_stop="8396" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8397" i_stop="8729" i_length="333">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.735" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8730" g_stop="9122" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="486" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10169" g_stop="10374" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="692" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10375" i_stop="10493" i_length="119">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10494" g_stop="10912" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="1111" r_length="419" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U575014" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1111</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8304" e_stop="8396"/>
          <exon e_start="8730" e_stop="9122"/>
          <exon e_start="10169" e_stop="10374"/>
          <exon e_start="10494" e_stop="10912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAAGTGAGTTTCTCCTTTTGCCCAAGTACTTTTTCTTATGCTATAACCTGTTGTTTTGGCTAACTTTTGCACAACTCGACTATTTGACAGATATAGATTAACACTATATATTGGGAAGTTGGAAGGAAATGACCTAGCCTTTTTTTTTCCGCTATGGGATACTGAATCCTGGTCTGTCATATGCATGACTTTTTCAGAGTTAATTATAGACCAGTAGGCCACATCTGGGGACTAGATACAAATTTTTTTTTCATATAAATATGAGTTTTCTTGATATTATAGTATGCTTAAGTAATCCTTCACAATTTTATTAATTGTTGGTTATATATTAATTAGATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTGGTAATCTTTTGTCTCTTAAACATTTTTTTTGAAAAGTTCAACTTCTATAGATTAACCGCGTAAAAGAATTGTTACATTTCCAACAACATATATAGTAAAATTGCTATTGTCTGAAAAAGATTGTTTCTCTAAACCCCCGGCTCATGACGTAACACATAATTGTTACATTTTCAAGTCACCTAAACTAAATATCAATTTCAAGCTCTCATTCATAAGTAAAAAAAATTAGTAACTTTAAAAATGATAAATTACCTGCTAAATATATTAAGTGTTGTTGTATACTTTCAATATTTATAAATTAGGGGTTGAGCTGAAAGATCCAACCTTTCAGTTTGTATTTAATAATCAACTAGATGTATATATAAGTAACTAAATCCAAAATCTAGTTACTAATTCTTGATGTCGCTATTCTTAAATTTAATATAGACCCTCTAATTTTGACTTGCATGGCAAGTTGATATTCATTAGTACGTCGCTTATCTAGTTCTTACGTGTAACGACTAGATCTCCATTTCTTGTAGGAGTATTAATTAACACATTGATAAAGAACTTCTTTCATTAACAAAAATAATTACTACTTATATGTAAAAACAATTTGAGCTTATACGAATTAAATAGTATTTTATTTTGGGGACATGCAATTTCGGTAATTACAAAAATTAGTATTAAGAAGATCTCAGTCGCCATTGGTTTATTCTGCTGCTAAAAGGGGAGAAATTAAAACTAATCACACTCCCCCACCTAATACTACCTAAATTGTTTATTTCGTACGTTGCCTTCCTATATACCCAAGAAATTACTACTTAATTATCGTCAAGTATTTTATAAGAGCTCTCTTATTCTAACATCTTAAGATTACTAGTCCTACACGTTACTAATGAAAAATATTATTAGTGTTAGAAAAAAGATAAAAGAAAAGAATTCTTTTAAGGATATTTAAGACCATATGCAATAATATTTTTACGTAATATATACATTTTATTCAAAACTGAACAAGTTATATGTCGATTTTGAAATTCAGAATTCATAAATTTAAAATTTTGTAGGATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATGGTACGCCTCTCTCTTTCTATAATATTTTTAATAACATAAGTCATTTTCTGATGTAATTGGTTTTTAAACATTTTGTAACTGAAGATGATTTTTTGTTGTTGTTGTTGGTTACGGTGAAGAAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGT</genome_strand>
        <mrna_strand>GTGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAA.............................................................................................................................................................................................................................................................................................................................................ATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATG.......................................................................................................................AAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567954" ref_strand="+" ref_description="SGN-U567954 Tomato 200607#2 [32 ESTs aligned] (*GB) gi|57015403|sp|Q43847|SSY2_SOLTU (e_value=0) Granule-bound; (*ATH) AT3G01180.1 (e_value=0) | Symbol: None | glycogen synthase, putative, similar to glycogen synthase Q43847 from (Solanum tuberosum) | chr3:62252-65852 REVERSE | Aliases: T4P13.13, T4P13_13; (*SWP) sp|Q43847|SSY2_SOLTU (e_value=0) Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2; ">
      <seq>tttctggtttccactcagacgctgagctttccattctcggtgaatctaatcctcacagggatcccttcttcggggacccattttgcatcaaacgatttcaacattgacctccattgtcgttacttgttggtttttcttttcacaatcgaatacccctaattctctgtactagtctctattcaattgggttttctatacttgtcaactgggtcgtcttctatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaagtcaaaagggacctggccgatgaaagggcacccccactttcaagatcatccatcacagccagtagccagacttcctctactgtaagttccaaaagaatattgaatgtccctccagaaactccgaagttcagtcaagagacacttttgaatgtgaattcgcgtaaaagtttagtcgatgttcctggaaagaagatccagtcttatatgccttcattatgtaaagaatcctcagcacaatcccttgtggaaaagaggaatgaaaatcttgaaggatcaagtgctgaggcaaacgaagagactgaagatcttgtgaatatagatgagaaacctcctccattggccggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattaccgaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttcatggtcaggatgtagaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagccatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaagcgcatggttttattttgcaaagcagcgattgaggttccttggcatgttccatgtggtggggtctgctatggagatggaaacttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaaattgtatgacccagtaggaggtgagcatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagtcatggatattcatgggaactcaagacttccgaaggtggttggggattgcatcagataattaatgagaacgattggaaattacggggtattgtgaatgggattgatacaaaagagtggaaccctgagttggacgttcacttacagtcagatggttacgtgaactactccttggacacactgcagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgattggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacgagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccacctcaatttttgtttagatgtattctctctcaataataaaattgaccgactcatctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15419" stop="22472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15719" g_stop="16260" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17404" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="1167" r_length="625" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1168" r_stop="1232" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1233" r_stop="1310" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1311" r_stop="1421" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19277" g_stop="19321" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1422" r_stop="1466" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19589" g_stop="19762" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1467" r_stop="1640" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20908" g_stop="22172" g_length="1265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1641" r_stop="2905" r_length="1265" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U567954" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2905</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15719" e_stop="16260"/>
          <exon e_start="16780" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
          <exon e_start="19277" e_stop="19321"/>
          <exon e_start="19589" e_stop="19762"/>
          <exon e_start="20908" e_stop="22172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTGGTTTCTACTCAGACGCTGAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTGGTAAATCCCGGCGCTCACTTTTCTTCTGAATTTTTAGTTTCATTTTGATCCTGGAATTTCAAACTCCTTGATTTACATTGAAATCTATTAATGAGTCCTCTGTATAATTGCCTGACATAATGTTTTCCCTTGTCACAAAATCTGGGCCTTATGGGATTGGGATGTCTTAGATGATTTTGTCTTCACTTTTCCTTTCTCTTTCTGGGTGGGGAGTTTAAGAGAGAGAGGTTTAAAATGATTTTCTGTACAAACAAGAAGACTGTGATAACGATCCCTTTGGTGAGCTCTGGTATTGACTTTGAGCTACCTTCTTTGCATTGTACATCATTCATTGATGTATCAGTCTTGAAGCTTTATTTGAATTGTTTATCCCCTTCTCATAAATAGTTTTGGCGGTACCTATCTGGCTGTTTTTAACTTCTTTTTTTCTCTTCCTGTTGCAGGATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAGGTATGATTTCTGATGTTTCAGGAACCTTGCACTAATTATTGACCAATTGCTCCCTACACTATCTGTCTACGATACGCCACAGTGGCCAGAAAAAAGACTCTGCAAACCTTAAATCAATCTTTGTAACCAACACTGTAAAATAAACCTAGCCATTCTATTTGGGCATGATTATCCATGTTTACTTCATACCTGCACACCCTGTTGTAACATTTTGCCCACTACTATTGCATTGATTTCAAAATACATTTTACTGATTCACAATTTCAGGTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAA</genome_strand>
        <mrna_strand>TTTCTGGTTTCCACTCAGACGCTGAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG.......................................................................................................GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG...........................................................................................................................................................................................................................................................................GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585839" ref_strand="+" ref_description="SGN-U585839 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345699|emb|CAO14997.1| (e_value=2e-69) unnamed; (*ATH) AT3G28970.1 (e_value=4e-55) | Symbol: None | expressed protein, contains Pfam domain PF03556: Domain of unknown function (DUF298) | chr3:10989024-10991122 REVERSE | Aliases: K5K13.10; (*SWP) sp|Q9VUQ8|DCN1L_DROME (e_value=2e-18) DCN1-like protein OS=Drosophila melanogaster GN=CG7427; ">
      <seq>ggaagcgaaggatgacggtgtcacttgggacaaaaaatattactagtatcagaatattccggtaacgttgcagataaattgtgccccaattcaaaagaagcaaaatcaatcgataactggaaagaaagctctgtgttgctatctttgaattagggttctatattacgaaccctaaaattccagttcgttcctaattcttgtagccatggactctcccgctgcaaatcacttggatatattcgatatctacggccgatactgtgatatcatgtcaggggcatatgctaccaggaacctagtagatgaattgcagaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagtttgcatataaggcatgtatttgggcgactatctttgaagaagtgtacaagcttaagttgcggttgaatttggaggcagacttctctgagttctcgcgtttctatgattttgtcttcttcgttttcagagaaaatggacaaaagaacatcactataagtaaagctgttactggttggaaaatagttttagctggaaggtttcggctacttgatcactggtgcgactttgttgagaaaaaacagcgatataatatatctgaggatacttggcagcaagttttggccttcagtcgtgctgtgcatgaaaatcttgaaggatatgatcgggaaggagcttggcctgttttgattgatgattttgttgagcacatgtacagggttggaggagttgatactatttctaactcattttgttgtagctgtggtaattcgggagcccagccatttgaggattcttaccctggattgataaattttcctggtatgaagaggaaatcttgtggcaatttacaaagagtagaagaatcatctcatggagatccaggcatggatgtgattgtcaattcgaagaggaggcacgttaattttggcaaccaaaatgttgactggacagaaaaccagtcacatggttactcggaaatggttaaagcaaatagcccattaaatcattttgcatctccctgcgctgttgaaggttgtttgtccaagggttttgcgggactgttgtcaggcccttcatgtttgcagtttgataaagaaaggagaacttcctatacataagaaggtttttgatcttgttcattactgcaatatatcagaaagtggcattttttatttcctgaagtagaactggggatatgtaggtttgacatgaggaagtattttttatttttgaaaaaaattaaattcgaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29941" stop="24389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29642" g_stop="29380" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28891" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="392" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28292" g_stop="28241" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="444" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146">
            <donor d_prob="0.377" d_score="1.00"/>
            <acceptor a_prob="0.793" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28094" g_stop="28019" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="520" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.687" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27905" g_stop="27823" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="603" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27822" i_stop="26881" i_length="942">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26880" g_stop="26784" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="700" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26783" i_stop="25976" i_length="808">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25975" g_stop="25930" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="746" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25929" i_stop="25306" i_length="624">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.777" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="25305" g_stop="25220" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="832" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="25219" i_stop="25141" i_length="79">
            <donor d_prob="0.596" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="25140" g_stop="24689" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="833" r_stop="1284" r_length="452" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U585839" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29642" e_stop="29380"/>
          <exon e_start="29019" e_stop="28891"/>
          <exon e_start="28292" e_stop="28241"/>
          <exon e_start="28094" e_stop="28019"/>
          <exon e_start="27905" e_stop="27823"/>
          <exon e_start="26880" e_stop="26784"/>
          <exon e_start="25975" e_stop="25930"/>
          <exon e_start="25305" e_stop="25220"/>
          <exon e_start="25140" e_stop="24689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGCGAAGGATGACGGTGTCACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAGGTTTGTTGATTGGATGATGTTATGATGGCTGGATTTTATTTAGTGTGAAACTATCCACATCCATCTCTCTTAGAGTTGGCCTTTTAATACAATACAAAGTATTTCAATCATCAAAAAAGGAACTTACATTGTATTTCCTTTTGTAGGCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCAGTAAGTTGATTACCTTGTAGATGATTTTGCAGCAGTGTGCTCATTCTTTGTAAAGCATTCATAGTGCAGTTAGTTTGTTTTTTTTAACTTATGTTGAGTTTAAAATATTTCAGCTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAGGTAAGTGTCAGTGACTCTTATTGATTGATTTGTTGTCATGTGTTCAAACTTCAAATTGCATTTTTCATCTGTTTGTATGTGTTAAGAATTATCGAATTTTAAGACTGAATAAATTCATCAATTACAGAGGATCCATGTGCTTGTAACTTTGCTTCGTTAAGGTTATTTGAGTAGACAATTAAGTCTACTTTATTAAGTTTGTCTTAAGGGTCAATAGAATACAAACAATAAGGTTTTGTCAGCTGATGAATAGACGTCGAATATCGTGGGATGTCATGTCATTAGCACCTATGTTAGTTATAGGCTTATGTAAGGAAGAAACAGGAGAAGACATGGCTGTTTATTGAGGAACGTCCTCGCACTTGTAGTTTCTTCTTTGACCCATGAAATTCTTGTTTGTGTAACACTTTAGGAGTTATTAGTACAGAATCCTATTTTTTTTCTTGTACTGCTTGTATGCATGAGATTTTCATAGCAGCAACGCAATAATTAAGCTTTAGTTCCAAACATGTGAGGTGCATCATGAAATTGACTAGTTTTTGGTTGGCTGGTTGCCTGCTGCAACTCCCCTCCATTTATCCAACTTTAGAACCGGCAATGTGAGCAATCTTTACCAGCTGGAGTTATACATGCGATTTTCCCATTATTAAAAAAATTTTGCAAAAGAAAAAAAAGTTTTTCCATCTGGTAGATTTTCTTCTTTTTGTTCTTTCTGATTGTGGTTGTTTTAGCTGTCTTGTGTTTTTGGTTTGGGCATTGAGACTTTCAGTTGTAGCTGGATTGTGGCAGCCAATGCATTATTTAGGCTTATATTTGTCAACTTAAATCCATGGTGGTACCTTACTTTACAAAGACTGATATTCTACTTTATGGTTGGGTGACTGCTGAATGTTGGTAACTTGCAATTTTCCTATAGTGATTATTGTTTACTGAAATCTCCAGAAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAGGTATTAAATTTACGCTATTTAGCTTTCAATCATCACCATCCAGGACATGTCAATGTCACCCTAAAATCATACTTAATAGAGACGTATTGTAGTTTGGTTCCTGAATTTGGTATTTTATATTTCTTCTATTTAAGAAGTATCCTTTTTTTTCAATTCCAGCTAGTTGGTATCATCAATGCATCCTTTGCTTCTGTGATGTTCTATTTATGCTATTATCAGAGATTTTAACGAAAGTTATTTGCAAGACAATAGCTGCAAAATGTGGGTTCTTAGTTTGAAAGAAAGGTAGTTAAAAGTTACTCAATCTTGTGGTAATCTGATCATCAAAGTTTAATTTGAAAGTTTGATTTGTGTATTGAATTGGTAAGATCATGCAAAGCATAGTTAGTGATGCAAAAACATCACTTCATTGTTTAACTGAGTCTGAATTTTGTATGAAGAGTCTTATAGAATTTTATTATTTGATTGAAATGTGTCAAACTTTTTGAGAAGTCCTAAGATTGAAAGACTATCATATAAAAATACTGTAGGAAGGAGAAACATTTTTCAGGTCCCAGAAGTAGAAGGTTAATTTTGTTTTCCGCTGCCACAATTATTTTCTGTTTTGCCTTGTCGTTCTTTTATCTTGAGTAATTAGTCCTTTACGATATATAATATTGGAATGAATTTGCACTTCTTTGGTATTGTGGAAAGATGATTATGTTTAGAATAGCTGCTTCCATTTTTCATATTTTGTGTTTCGATCTTACTAATCCCACCGGCCCACTCCTTTAATCATTATGTTTTTTTGTGGTGATGTTCTCTGCAGGAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAGGTGGCTACTAACCAATTTTTCTCGTGGAAATTAATTCCAATGTGTTTCTGCTTCTTTCATCTAGATTATATTGGTCATGTTAAGAAATATTTACTTGGAACGGTAATGGGTTTTCTTCCCTTTTCTCCACTTTTGCGGCACAAAGAGGTTAGAGACCATGTCTGGCATGTGTATCTTAGAGATGTAATTACCCTCTATTGCTTATGCTTAGAGAAGATAAGCTTGGTATGATATGATTCAGGAGATTGATCCTCATCATTCACTTGTATCATTTAAGATATTCATCTTATTGGATGAAATAAGTTCCGGGGACTAACTCGGGTGATTGATGTATAGAACTTTGTGGACTTGGTGTCTGTCTTGGACGGTCATGGTTGTGTAGTTCATGGCCTACACAATTTGTGGTTGGTTCCTTCCATGGAATTTTATTACATGGTCTATTTTTCTCTTACATGAAGGATGTGTCTAAATTTAGATTCCGATTCAGACTGCAGCATAAACTAAAAGGGAAATCTTGGCCTTGCTTTAGCTAGCATTCCGTAACGGTCTATGCACTTTTGAATGCCAAGCAATTTGCACTGCATTTTTTAAGACTAGATTTGACGAGGCAGATTTGTTATGCAGGGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTGGTAATTGCGGCTAAAGATACTGTCTTGGTTCACACTGAATTATCTATACTATTATTACTTATCTGTGTTCTTGGTGCAGGATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTCTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTG</genome_strand>
        <mrna_strand>GGAAGCGAAGGATGACGGTGTCACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAG..................................................................................................................................................GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCA.................................................................................................................CTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTG...............................................................................GATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTTTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567069" ref_strand="+" ref_description="SGN-U567069 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|15144515|gb|AAK84482.1| (e_value=2e-130) unknown [Lycopersicon esculentum]; (*ATH) AT5G33303.1 (e_value=4e-77) | Symbol: None | expressed protein | chr5:12587406-12588456 FORWARD | Aliases: None; ">
      <seq>gaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaaagataaaagacgatacactaatcgtcaaggtggtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="66187" stop="67593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66495" g_stop="67293" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="822" r_length="800" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U567069" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66495" e_stop="67293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTTTCATAATTT-CATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCGCTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCAAAAACTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATATGATATTGCAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGTTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAAAGATAAAAGACGATACACTAATCGTCAAGGTGGTGG</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAAAGATAAAAGACGATACACTAATCGTCAAGGTGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589180" ref_strand="+" ref_description="SGN-U589180 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147822235|emb|CAN66208.1| (e_value=9e-35) hypothetical; ">
      <seq>gtacgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="67488" stop="68637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67792" g_stop="68337" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="574" r_length="551" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U589180" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67792" e_stop="68337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAAATGTATGTCTTCTTGATAGTGCTACAACACATACAATATTAAAAGAAAAGAAATG-----CTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589179" ref_strand="+" ref_description="SGN-U589179 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147777887|emb|CAN77974.1| (e_value=4e-34) hypothetical; ">
      <seq>ggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatgacccggttggggccatcctggattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="67630" stop="68594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67913" g_stop="68294" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U589179" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67913" e_stop="68294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGA-CCGGTTGGG-CCATCCTGGATTTA</genome_strand>
        <mrna_strand>GGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCCGGTTGGGGCCATCCTGGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599384" ref_strand="+" ref_description="SGN-U599384 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15144516|gb|AAK84483.1| (e_value=7e-14) putative copia-like polyprotein [Lycopersicon esculentum]; ">
      <seq>ggcaagatttgctgattgtcattttgatgaatcagtatacccaacattagggggagaacataagtcattgggaaaagagatagattggaattcatcatctctatctcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="68797" stop="69505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69097" g_stop="69206" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U599384" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>110</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69097" e_stop="69206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATACCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATC</genome_strand>
        <mrna_strand>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATACCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600220" ref_strand="+" ref_description="SGN-U600220 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15144516|gb|AAK84483.1| (e_value=1e-14) putative copia-like polyprotein [Lycopersicon esculentum]; ">
      <seq>tcgaacaaaccaatgtgagcaagaagttcaaagaataatttatttgcagaacattgcaaatcaactaccagatgcatttactaatcttccaaggattactaaatcgcatattccagctgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="68914" stop="69636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69214" g_stop="69336" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U600220" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>123</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69214" e_stop="69336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAGAACATTGCAAATCAGCTACCAGATGCATTTACGAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</genome_strand>
        <mrna_strand>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAGAACATTGCAAATCAACTACCAGATGCATTTACTAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586539" ref_strand="-" ref_description="SGN-U586539 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|147822235|emb|CAN66208.1| (e_value=0) hypothetical; (*ATH) AT4G23160.1 (e_value=3e-64) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=3e-87) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>ccaaaaaaaaaaaaaatattaaaaaatatatcatttcaaagtgtgtgtttatatgtttcatatagtggctatttatagccatacattaatgcatacaaggtcattagtgatgtcatattccacatgacactacaattattttacactacaattattttacaacactcccccttggatatctatgtaaaagaaagtacatagatatacataatacgctttatttgctgcctcattaaaaaccttaccaggaaaacccaacttgggacaaaaccatagttaaggaaaagagtacaacgcgtatttcactccccctgatgaaaactttacttgatatcttggagacggcgcattccaatcttgtatctcaacttctcaaacgttgatgttggcaatgcctttgtgaataaatcagcaagattatcacttgaacgaatttgttgaacttctatctcaccattttgttgaagatcatgcgtgaaaaagaactttggtgagatatgctttgtccggtctcctttgatgtatcctcctttcaattgagctatacatgcagcattatcttcgtacattgtggttggtatattctttttcaaagaaaaaccacacatttcctcaatatgatgggtcattgatctcaaccagacgcactctcgacttgcttcatggatggctattatttctgcatgatttgaagaagtggctaccaacgtttgcttcattgatcgccaagatattgccgtgtctccacatgtaaacaaatagcctgtttgtgatcgggctttatgcggatctgataaataccctgcatctgcgtaaccaatcagttctgatttggattcattggaatagaataaacccatgtccatggtccctcgaagatatcgaagtatgtgtttaacaccattccaatgtctttttgttggggaggaactgaatcttgccagtagacttactgcaaaacagatatctggtcgagtattgttagcaaggtacattagtgccccgatcgcactaagataaggagtttcatcaccaagaagctcttcatcattctcttgaggtcgaaatggatctgtattgatgtcaagcgatcttaccaccattggagtactcaatggatgtgagttatccatgtaaaaacgctttagtatcttttctgtgtacgttgattgatgaacaagtattccatttgacaaattctcaatctgtaggccaagacaaaattttgtcttgccgagatctttcatttcaaattcttttttcagacactcaatagcttctaaaagctctttaccagtgccaatgatgttcaaatcatcaacatacacagctattattacaaattcagaccccgaccgtttaataaaaatgcagggacaaatcgggtcatttttgtaccctttctttaacaaatattcactcagacgattgtaccacatccttcctgattgtttcaatccatacagagatttctgaagttttattgaacaagtttctcttgaatctttgtatgcttcaggaactttgaatgcttcaggaattttcatgaaaatgttgtggtccaatgagccatatagataggctgtgacaacgtccattagacgcatttcaagtttttcatgaactgccaaatttatgagatatctgaaggtgattgcatctaccactggagaatatgtctccatataatcaatgccaggtctttgagaaaaaccttgagcaacgagtcgggccttatatctcatgacttcatctttctcatttcttttccgtacaaaaacccatttgtaccccactggcttgataccttcaggtgttcggattatcggtccaaaaacttcacgtatttctagtgaagccaattcagcttgaattgcatccttccattttggccaatcatttctctgtctacattcgtgaacagattttggctcaaaatcttcatattgttgcattatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="71810" stop="69347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71523" g_stop="71481" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="185" r_length="43" r_score="0.767"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71480" i_stop="71422" i_length="59">
            <donor d_prob="0.000" d_score="0.77"/>
            <acceptor a_prob="0.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71421" g_stop="69647" g_length="1775"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="1961" r_length="1776" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U586539" ref_strand="-">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>1818</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586539" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71523" e_stop="71481"/>
          <exon e_start="71421" e_stop="69647"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTCAATGGATTTATAACACTCCCCCTTGGATGTCCATAGATTATGTGCCTCGTTAAAACCTTACTAGGAAAAATCCAGTGGGAAAAAGCCTAGTGAAGGAAAAAGAGTACACATATCT-CATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTCTGAATATGATGGGTCATTGATCTCAACCAGACACACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGAGCTTTATGTGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAACATATCTAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCAAGTATTGTTAGCAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGCCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGACAAAATTTTGTCTTGCCGAGATATTTCATTTCAAATTCTTTTTGCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTGCCAATGATGTTCAAATCATCAACATACACAACTATTATTACAAATTCAGACCCCGACCGTTTAATGAAAATACAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTTAGACGATTGTACCACATCCTTCCTGATTGTTTCAATCCATACAGAGACTTCAAAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGCTTCAGGCACTTTGAATGCTTCAGGAATTTTCATGAAAATATTATGGTCCAATGAGCCATATAGATAGGCCGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTTCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTCGTACAAAAATCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATTATTTCTCTGTTTACATTCGCGAACAGATTTTGGCTCAAAATCTTCATCTTGTTGCATTACTTC</genome_strand>
        <mrna_strand>ACACTACAATTATTTTACAACACTCCCCCTTGGATATCTATGT...........................................................AAAAGAAAGTACATAGATATACATAATACGCTTTATTTGCTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCACTCCCCCTGATGAAAACTTTACTTGATATCTTGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAACGTTGATGTTGGCAATGCCTTTGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTCCTCAATATGATGGGTCATTGATCTCAACCAGACGCACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAACGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGGGCTTTATGCGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAGCAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGGCCAAGACAAAATTTTGTCTTGCCGAGATCTTTCATTTCAAATTCTTTTTTCAGACACTCAATAGCTTCTAAAAGCTCTTTACCAGTGCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCGACCGTTTAATAAAAATGCAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAGACGATTGTACCACATCCTTCCTGATTGTTTCAATCCATACAGAGATTTCTGAAGTTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGCTTCAGGAACTTTGAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAAATTTATGAGATATCTGAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCATCTTTCTCATTTCTTTTCCGTACAAAAACCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATCGGTCCAAAAACTTCACGTATTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAATCTTCATATTGTTGCATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581279" ref_strand="+" ref_description="SGN-U581279 Tomato 200607#2 [47 ESTs aligned] (*GB) gi|4138916|gb|AAD13633.1| (e_value=8e-132) expansin precursor [Lycopersicon esculentum]; (*ATH) AT1G26770.2 (e_value=4e-103) |; (*SWP) sp|Q9LDR9|EXP10_ARATH (e_value=4e-102) Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10; ">
      <seq>aactataccctcgttcctcaagcaaacacatagaaactttatttttttgtgagtcattttccctagttgttcaatatcttcatttcctaactataccctcgttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctatttttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttactataataataaaaggaaactccaagttgtactaggtgcaatgtcttataaagagcattctctaccttaccatttcttaatgatgtcttcttgtaaatatgagagtttttactataaaaaaaaaaaaaaaaaactcgagactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76507" stop="74324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76222" g_stop="76160" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="136" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="268" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="557" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="74625" g_length="831"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="1387" r_length="830" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1388" polyA_stop="1402"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U581279" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1315</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76222" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="74625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</genome_strand>
        <mrna_strand>ATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTA-TTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTGTAAATATGAGAGTTTTTACTATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590324" ref_strand="+" ref_description="SGN-U590324 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>agtacaacttggagtttccttttattattatagtaacattttcttacaaattaatagctagagacaattggtacatacatactcaccataattagtgcttagctcttttgcagtaaaaaaaaaaaatagatatttttcttctatgcacacaataccgtaaatgctatttatactattaaattgagcagtaaaagctcacaactgccgccccctaaacgttaataaccacccaaaaaagagtaggccaaatcaattctttttacttccacaattgaatgaccaattttacaatggacaaaaagtgccaaactgcgcttttccccaaatattttggtgagtaaaaccctcttttttaaggcaaaactcttaaaataagtgtagtaggaggtaatatactttgaaaattctgatttttttttcgtaaacgagaagttgcgttttagaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="74411" stop="75457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74711" g_stop="75157" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U590324" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74711" e_stop="75157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTACAACTTGGAGTTTCCTTTTATTATTATAGTAACATTTTCTTACAAACAAATAGCTAGAGACAATTGGTACATACATACTCACCATAATTAGTGCTTAGCTCTTTTGCAGTAAAAAAAAAAAATAGATATTTTTCTTCTATGCACACAATACCGTAAATGCTATTTATACTATTAAATTGAGCAGTAAAAGCTCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAGAGTAGGCCAAATCAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTTCCCCAAATATTTTGGTGAGTAAAACCCTCAAATTTAAGGCAAAACTCTTAGAATAA-TATATTAGCAAGTAGTATACTTTGAAAATTCTGATTTTTTTTTCTTAAAGAATATGTTGCGTTTTAACGGAA</genome_strand>
        <mrna_strand>AGTACAACTTGGAGTTTCCTTTTATTATTATAGTAACATTTTCTTACAAATTAATAGCTAGAGACAATTGGTACATACATACTCACCATAATTAGTGCTTAGCTCTTTTGCAGTAAAAAAAAAAAATAGATATTTTTCTTCTATGCACACAATACCGTAAATGCTATTTATACTATTAAATTGAGCAGTAAAAGCTCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAGAGTAGGCCAAATCAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTTCCCCAAATATTTTGGTGAGTAAAACCCTCTTTTTTAAGGCAAAACTCTTAAAATAAGTGTAGTAGGAGGTAATATACTTTGAAAATTCTGATTTTTTTTTCGTAAACGAGAAGTTGCGTTTTAGAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589988" ref_strand="+" ref_description="SGN-U589988 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|4138916|gb|AAD13633.1| (e_value=3e-68) expansin precursor [Lycopersicon esculentum]; (*ATH) AT1G26770.2 (e_value=3e-57) |; (*SWP) sp|Q9LDR9|EXP10_ARATH (e_value=2e-56) Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10; ">
      <seq>gcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtctataatttggggccaaaattggcagaatagcgcttagcttagcggccaaatcttgtcctttaacgtcactacgggcaatggtcgcactgttgttttcatacaaagccgctcctaaatgggggggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76024" stop="74896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75724" g_stop="75574" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="75196" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="412" r_length="261" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U589988" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75724" e_stop="75574"/>
          <exon e_start="75455" e_stop="75196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTG-TTTCATACAATGCAGCTCCTA</genome_strand>
        <mrna_strand>GCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCTATAATTTGGGGCCAAAATTGGCAGAATAGCGCTTAGCTTAGCGGCCAAATCTTGTCCTTTAACGTCACTACGGGCAATGGTCGCACTGTTGTTTTCATACAAAGCCGCTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566813" ref_strand="+" ref_description="SGN-U566813 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|81076794|gb|ABB55397.1| (e_value=0) polypyrimidine; (*ATH) AT3G01150.1 (e_value=6e-124)  Symbol: None | polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative, similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Sus scrofa} SP:Q29... ; (*SWP) sp|Q9MAC5|PTBP1_ARATH (e_value=6e-123) Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana GN=PTB; ">
      <seq>gatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttgatggtcattatttaagatcttttgttggagacattctggatatgtaatcatgtcggtcataaacctttctatggcttgcatatacaggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccggcagctaaaacacagatgtgtttgtcatggcctcgtaggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtccttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaatggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgcaaaggacgctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactctcgtcatactgatctgaatgtacaggtatagatatgtgcttttgagttggtttcgaagggaaaaaagatgtcccaataaataaagagtcgacaccatattttaagattctattactgaaagtatgcttcttgacacttgttgcttcctgcatctttttcatttgacctcttagcttgaattaattattcaattgtgtctaatcaggcatacagtgataaaagtagagactacacagttccagaatcaagtttgcttgcgatgcaacaagcatctgcagtccatgccgcaccagctgtttggcataatcctcagtctggtccagtgcagtcatcagctggctatgccgctactggtgctgttcctggccaagcaccaccacctgcatggaatccaaatttgcagggtggaggatcaacctttccatcggctcctaccggatatccaggtcattcatatgctccaccagcttatgcaactggagtacatcctattggatcgtcacagcagaccaatcacattgctactggtagtcaaccttttactgtaagtcagccttttcatccatcaaccatgccgcctggaggtgttcctcctcctgggcatgcaccttatcatggttaataggctcccatggggacattgaagctgttattaatttacgctggcttaggttcttgttcagtgtcggcgtgggcttgtgatgtcatctgtataccttcagattctcttctttcctgaaactcactcttgaattttagtttttggccttcttgatgaactgagctaatgtttaatctgagtgtggattaaaatcatctgtataatgagctgcttagtaacaacggtttttcttattgacatattagtattgttactctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90449" stop="81732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90150" g_stop="90124" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="237" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89322" i_stop="88844" i_length="479">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88843" g_stop="88757" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="324" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88756" i_stop="88622" i_length="135">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="387" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="461" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="557" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87018" i_stop="86852" i_length="167">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86851" g_stop="86799" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="610" r_length="53" r_score="0.868"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="86798" i_stop="85640" i_length="1159">
            <donor d_prob="0.716" d_score="0.88"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="668" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="669" r_stop="773" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="85313" g_stop="85232" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="855" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="82999" g_stop="82032" g_length="968"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="1823" r_length="968" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U566813" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1823</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90150" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88843" e_stop="88757"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="86851" e_stop="86799"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85232"/>
          <exon e_start="82999" e_stop="82032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTGGTATGTATGGATTATGAATGTTGTTCTTTGGTAGTTTAATCAACTACCTGTGTATACTTGGTCTAGCCTTTAAAGTTTATTGTGGCTTTTTTAATTTCTTCATCTCTTCTTTTACTCTTTCCTCACCCCAATAAGAATTGAGTTACTTGAAAGAAAACAAGAAAATAATGTGGAAATAAAAATATGAAGGATAGAGATTTGCAAAATTTGAGAATAAAATTCCTAAACTTCAAAATGAAGTGCTAAGAAGTAAGGACCCCGAGGCTCTCTTAACCCATGCTTATCGATGTCTTTTTTTGTTTTTTTATGAGGTATGCCTATCAATGTGTTTATAGGCCATGTATTGCTAATACTATGGTTTGCTATGTATTAGTCATATACCTTATAATATTGAATATGGTAAAAATCCTACCAAACATAGGATTAAATAATATCATGATTAAATACACTATACATGTGTTGAATTCTCTAATACAAAATTCCGAATCACCCCTAGTTGGTCTTAATATTCAAAAAATAGCTGATTAAAGTTAATTCTTATACCAATATAGTCAATTCAAGAACTTAAATAACAGGGTAGATCTCGATTTCGAAGAATTAGAGATAAATAATTAGTATAAAACTAATTACCTTTCTACTTTACTTTAATAAAAATCCGAAGGTATCAAGTTAAGAATTAATCTTACATCCAAGAAGATGTTTCCCATAAGGTTGCAAGATCAATTCATAGTTACCTCACAACACACAAATGTGTAAAAAGAAGAAACATCTCTCAAATAATATTCTCAAAAGTATCAAATCCACTCTTTTATATAGGGGAAAACTATTCAAAATAATATGAGATCTAAATACTAAAACCTAACTATAGAAAACTTTGATCTCGGAAAGCACGCAAAATGATGCCGAACTTCTTTCCTAACGAAATAAGGAAAAAGTTGCCGAACTTTTAAACATATGGACATGACTTCTCCATCCATTTTTGACAAGGATTTAAGCTCACTTTTGGGCAGAATTTTCAGCCCTATGTGGGCTTGGTTGTAATTTTTTGGGCTCATATGGACCCTATTCTTCCTCGTCTTGGGCTTGGACTTGGATCTAGATCATGGAATATGTGTAGCACTTGGCCCATTCTTCTTCGCAATTCTTGGACTCATTCTTGTGCTCTTCTTCCACAATAAACATCTTGATTTTCATTGAGGTTCGTCAATCTTTAATGGAAGTATGCCACCATGGATGCTATCAAATCCTCTTTGATGGTTGTGGCCATTGGCTTGGTCTTGAGAAATATATGTGAGGGCAGTAAGGAGTTATACTTGAACAACTGGCTAGCTTCAGAGAATGATTCTATTAACATTCCCATATACAAATACACTGCAAACCTTCATCGTCCTGCATGGATGTACATGATCTATTTTGCATTAGAATCATTTATGTGAGTAACCGTATTTTCAATCACCTCATGTTTATTGTAGATCAGGTTTCCTGCAGAATGCACAACAGCCAACTTATACTGAATATGATTTTGGATGTGAGGATACTCTAAAGCCTTAAAAATCAGCCGGAACTGCCAGTAAATGGTCTCTATAAATGTGTTCAAGTATTTTCCAAGGAAATTTGTGCGTCGTCGTTTCAGTCTTCTAATGGATAATTTTATCCATGCACCCAAGGGTGTGGCACAACAGTCAATCTGGGTGAAAACTATGGGGGCCAAAGTTCAAATTATGATATAGACAAAAAGAAAATGCTTCACTAGATAATTTATTCTCTTCTGAGTTCTGCCTAAGCCTTGGTGGACAATATTACTCAATAATTGTATATTTGGGAGGTAATTGGTGCATATTTATATAATCAGAACCCATGATTTTTGACACAGTATATATATATGTAAAAATCTACTAAAATATTAACATATATTAAACCTGAACCCATGACTTTATTAATAGTACAATGAGTTCAATGCAAGGTTGAACCTAGTAAGTGTAAATCTTGGATCGCCTCTAGAAATAGTCGAGCTGCAAAATCTGACCCAAATACTACTGTTATCAGTTATATAGTTAGAAAGAAGAGTAGTGCACATTCTGCTATCTTACATTAGGCATTAACAGATGCGTTTGTAAACATATCTTTAAGTGCACATTCAACTATCGTTTTTCCTTTTTTTTCCATGTCATCCTTTTCAATGAAGTTGAACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCTTGAACTTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTT</genome_strand>
        <mrna_strand>GATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAG.......................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG.......................................................................................................................................................................GGACTACACAAACCCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG............................................................................................GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCCTGAAACTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566814" ref_strand="+" ref_description="SGN-U566814 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|81076794|gb|ABB55397.1| (e_value=8e-168) polypyrimidine; (*ATH) AT3G01150.1 (e_value=3e-140)  Symbol: None | polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative, similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Sus scrofa} SP:Q29... ; (*SWP) sp|Q9MAC5|PTBP1_ARATH (e_value=3e-139) Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana GN=PTB; ">
      <seq>gtgaagacttagagaaaaatgagacaagccatggagatgcagaattgtgccatccgtcgagtcccaaagaaaagaacaagttctcaaagtccgttaaaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcacctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtccttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaatggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90690" stop="82678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90390" g_stop="90124" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="322" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="532" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="595" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="669" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="765" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="823" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="824" r_stop="928" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="85313" g_stop="85232" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="929" r_stop="1010" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="82999" g_stop="82978" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1011" r_stop="1032" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U566814" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>977</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90390" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85232"/>
          <exon e_start="82999" e_stop="82978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTGGTATGTATGGATTATGAATGTTGTTCTTTGGTAGTTTAATCAACTACCTGTGTATACTTGGTCTAGCCTTTAAAGTTTATTGTGGCTTTTTTAATTTCTTCATCTCTTCTTTTACTCTTTCCTCACCCCAATAAGAATTGAGTTACTTGAAAGAAAACAAGAAAATAATGTGGAAATAAAAATATGAAGGATAGAGATTTGCAAAATTTGAGAATAAAATTCCTAAACTTCAAAATGAAGTGCTAAGAAGTAAGGACCCCGAGGCTCTCTTAACCCATGCTTATCGATGTCTTTTTTTGTTTTTTTATGAGGTATGCCTATCAATGTGTTTATAGGCCATGTATTGCTAATACTATGGTTTGCTATGTATTAGTCATATACCTTATAATATTGAATATGGTAAAAATCCTACCAAACATAGGATTAAATAATATCATGATTAAATACACTATACATGTGTTGAATTCTCTAATACAAAATTCCGAATCACCCCTAGTTGGTCTTAATATTCAAAAAATAGCTGATTAAAGTTAATTCTTATACCAATATAGTCAATTCAAGAACTTAAATAACAGGGTAGATCTCGATTTCGAAGAATTAGAGATAAATAATTAGTATAAAACTAATTACCTTTCTACTTTACTTTAATAAAAATCCGAAGGTATCAAGTTAAGAATTAATCTTACATCCAAGAAGATGTTTCCCATAAGGTTGCAAGATCAATTCATAGTTACCTCACAACACACAAATGTGTAAAAAGAAGAAACATCTCTCAAATAATATTCTCAAAAGTATCAAATCCACTCTTTTATATAGGGGAAAACTATTCAAAATAATATGAGATCTAAATACTAAAACCTAACTATAGAAAACTTTGATCTCGGAAAGCACGCAAAATGATGCCGAACTTCTTTCCTAACGAAATAAGGAAAAAGTTGCCGAACTTTTAAACATATGGACATGACTTCTCCATCCATTTTTGACAAGGATTTAAGCTCACTTTTGGGCAGAATTTTCAGCCCTATGTGGGCTTGGTTGTAATTTTTTGGGCTCATATGGACCCTATTCTTCCTCGTCTTGGGCTTGGACTTGGATCTAGATCATGGAATATGTGTAGCACTTGGCCCATTCTTCTTCGCAATTCTTGGACTCATTCTTGTGCTCTTCTTCCACAATAAACATCTTGATTTTCATTGAGGTTCGTCAATCTTTAATGGAAGTATGCCACCATGGATGCTATCAAATCCTCTTTGATGGTTGTGGCCATTGGCTTGGTCTTGAGAAATATATGTGAGGGCAGTAAGGAGTTATACTTGAACAACTGGCTAGCTTCAGAGAATGATTCTATTAACATTCCCATATACAAATACACTGCAAACCTTCATCGTCCTGCATGGATGTACATGATCTATTTTGCATTAGAATCATTTATGTGAGTAACCGTATTTTCAATCACCTCATGTTTATTGTAGATCAGGTTTCCTGCAGAATGCACAACAGCCAACTTATACTGAATATGATTTTGGATGTGAGGATACTCTAAAGCCTTAAAAATCAGCCGGAACTGCCAGTAAATGGTCTCTATAAATGTGTTCAAGTATTTTCCAAGGAAATTTGTGCGTCGTCGTTTCAGTCTTCTAATGGATAATTTTATCCATGCACCCAAGGGTGTGGCACAACAGTCAATCTGGGTGAAAACTATGGGGGCCAAAGTTCAAATTATGATATAGACAAAAAGAAAATGCTTCACTAGATAATTTATTCTCTTCTGAGTTCTGCCTAAGCCTTGGTGGACAATATTACTCAATAATTGTATATTTGGGAGGTAATTGGTGCATATTTATATAATCAGAACCCATGATTTTTGACACAGTATATATATATGTAAAAATCTACTAAAATATTAACATATATTAAACCTGAACCCATGACTTTATTAATAGTACAATGAGTTCAATGCAAGGTTGAACCTAGTAAGTGTAAATCTTGGATCGCCTCTAGAAATAGTCGAGCTGCAAAATCTGACCCAAATACTACTGTTATCAGTTATATAGTTAGAAAGAAGAGTAGTGCACATTCTGCTATCTTACATTAGGCATTAACAGATGCGTTTGTAAACATATCTTTAAGTGCACATTCAACTATCGTTTTTCCTTTTTTTTCCATGTCATCCTTTTCAATGAAGTTGAACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGC</genome_strand>
        <mrna_strand>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG............................................................................................GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAATTGCAGCTGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600193" ref_strand="+" ref_description="SGN-U600193 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345708|emb|CAO15006.1| (e_value=6e-27) unnamed; (*ATH) AT5G15270.2 (e_value=2e-20) | Symbol: None | KH domain-containing protein, various predicted proteins, Arabidopsis thaliana and Oryza sativa | chr5:4958340-4961066 FORWARD | Aliases: None; ">
      <seq>ttaatcaacaactgcagcaaaatatgtgctgtgtttgacggattggaatcgacagcttgtgtagatacattaccatttatccgcagagtattttgtaatggctggtcgaagaaatagctatgggaagcgctcccattctcagtctgattatgttgactatgggagaaataaaaggagaaatactggctctgataaggactctttctctatcggtcctgacgacacagtttaccggtacttatgcgatgaaaagaagattggaagtattatcggcaggggaagtgagattgttaagcgattaagggtggacactaaatctaaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="91701" stop="93147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92001" g_stop="92086" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92087" i_stop="92607" i_length="521">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92608" g_stop="92847" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="326" r_length="240" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-U600193" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92001" e_stop="92086"/>
          <exon e_start="92608" e_stop="92847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATCAACAACTGCAGCAAAATATGTGCTGTGTTTGACGGATTGGAATCGACAGCTTGTGTAGATACATTACCATTTATCCGCAGGTAATTGAATCCACAGTATTCATGTTTTGAATTTACAATTATACAGATAGCGCATTGAGAATTGACATTCATAGTATTGAATTTCAGATCTGTTGGAACCAGTATGTTGAATTTTGCAATTCTTATGCTATGAATTTATAGTGCATTTAATTGCAATAGACGATAATTTCATATAGATTCAATTTGTGTCCTTGTGGACCTGAATTCCCATTTCAGGTCTGCCACGATTTGTTATCCGTGCATGCATGTTTCTTTGTTCATGGAAATGTAGTGATTCATGTATAGTCAGGTTTATAGCAGGAAATCCTGTTAATCTGGAATTGATAACTCGAGGTGGCTATTGCTAGCTACATGTTTAGCATGTGACTGATATCAATGTAATTCAAGTTTGTTGAGTAAATATATCTTCAGATTCCGTCTCTGGCAATAAATTGTTGAAGATCAAATATTGTATAATTCTTTAGGGGCAACTTTGTAAACATAATCTTATGATTTTGTTGCAATCTTCGTATGATAAGCAGAGTATTTTGTAATGGCTGGTCGAAGAAATAGCTATGGGAAGCGCTCCCATTCTCAGTCTGATTATGTTGACTATGGGAGAAATAAAAGGAGAAATACTGGCTCTGATAAGGACTCTTTCTCTATCGGTCCTGACGACACAGTTTACCGGTACTTATGCGATGAAAAGAAGATTGGAAGTATTATCGGCAGGGGAAGTGAGATTGTTAAGCGATTAAGGGTGGACACTAAATCTAAAATCA</genome_strand>
        <mrna_strand>TTAATCAACAACTGCAGCAAAATATGTGCTGTGTTTGACGGATTGGAATCGACAGCTTGTGTAGATACATTACCATTTATCCGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTTTGTAATGGCTGGTCGAAGAAATAGCTATGGGAAGCGCTCCCATTCTCAGTCTGATTATGTTGACTATGGGAGAAATAAAAGGAGAAATACTGGCTCTGATAAGGACTCTTTCTCTATCGGTCCTGACGACACAGTTTACCGGTACTTATGCGATGAAAAGAAGATTGGAAGTATTATCGGCAGGGGAAGTGAGATTGTTAAGCGATTAAGGGTGGACACTAAATCTAAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562739" ref_strand="+" ref_description="SGN-U562739 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345711|emb|CAO15009.1| (e_value=5e-88) unnamed; (*ATH) AT5G15300.1 (e_value=1e-75) | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains INTERPRO:IPR002885 PPR repeats | chr5:4968166-4970037 REVERSE | Aliases: F8M21.190, F8M21_190; (*SWP) sp|Q9LN01|PPR21_ARATH (e_value=2e-51) Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12; ">
      <seq>caggcataagtgtggcagcattaggaaggcacttgaagtgtttcaaggcatgaaagagaaggacgtgtcgtcttggaacataattatattaggattagctttccatggtcattctgaagaatgtatctctctttttgaagatatgaggagaatgaagtatatccctaatgaaattacttttgttggtgtattagttgcttgtagtcacgctggtaaagttgatgatggccgagaatatttcagcatgatgagaactgactacaatattgagacaaacataaggcactatggttgtatggtggatatgctagcgcgtgcaggactattgaatgaagcgtttgagttcataaacacgatggacattaaacctaatgctattatatggagaacactgctaggagcttgtaaagttcattccaatgtcaagctgggaaggtatgcgaataagcagttgcttaaattgggaagggaagacagtggggactatgtcttgctgtctaatatctatgcatcgagggatgaatgggatggtgttgaaagggtgaggaagttgatggatgacaatggggtttggaaagaacctggttgtactttaattgaggctgatgattatgatctcaagaatttttatttcgattccaagtgtaaacactcttgagaataaagctagcaggcacaagcagagaagtgagcaaccaagcttaatgccaaacttggaagtgatcaatgatcagtttcttgaaagggccagagctgacaatatgatgagcagcaaaaacacaagaactccaatgaaggatccaaccaaagagccagatgcacgatcgcagaaagagttgtagtgctggcaaatagcaatccaattagcacgagcatttcccttgtgtgccaaatacactatggctgccgcagctgatgctccagatgttaaaaatgccatcatcaccgtatcaaagaagatcaacacaacccttgttattcttgcaccactcatcacaatgtgcaaaatggataggacaagagatacagcgaggtacgcgctaactatgccattagctaccacaaagaacctgtgaattttcataaacaataatgagtaacctggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="111898" stop="110095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111898" g_stop="111233" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="716" r_length="666" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111232" i_stop="110786" i_length="447">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110785" g_stop="110395" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="1107" r_length="391" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-U562739" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1057</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111898" e_stop="111233"/>
          <exon e_start="110785" e_stop="110395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGATGGTGTTGAAAGGGTGAGGAAGTTGATGGATGACAATGGGGTTTGGAAAGAACCTGGTTGTACTTTAATTGAGGCTGATGATTATGATCTCAAGAATTTTTATTTCGATTCCAAGTGTAAACACTCTTGAGAATAAAGCTAGCAGGCACAAGCAGAGAAGTGAGCAACCAAGCTTAATGCCAAACTTGGTAAGCGTGAAGGTCCATCCTCTTGGGAGGGTACAAAGACGATGTCTTTCATCCAACTCTTCCGTATATTCACATCATGAGCCACTGTAGTTCATTAGACGTGTAAATTGCAATTCGGATTTGTGGTCATTGTATGCCTCATTTAGACATTTTGTTGTAGTCTTCGTTGGTGCACACAACATTAATTTATATTTGCAGCACCAAATAAAATTTATAGCTTGATATATGGTCCTAAGCTTTATACAGAAACTTGGTGTACTTGTTGAGTTTCAGCAGGAAGACAGTTGTCAAAGTAATAACAGAACAAATGCAACATCAATTTTATTGATTGAGAGGAAGAATCACTAAAACAAACAGATTTAATAACAGCTTGAAGGAATAAATGGCAAGAATCATTCAAAAATTCTTGGAATATCAAATGATAAAACGCGTTCTTTCTTCACGCAGGAAGTGATCAATGATCAGTTTCTTGAAAGGGCCAGAGCTGACAATATGATGAGCAGCAAAAACACAAGAACTCCAATGAAGGATCCAACCAAAGAGCCAGATGCACGATCGCAGAAAGAGTTGTAGTGCTGGCAAATAGCAATCCAATTAGCACGAGCATTTCCCTTGTGTGCCAAATACACTATGGCTGCCGCAGCTGATGCTCCAGATGTTAAAAATGCCATCATCACCGTATCAAAGAAGATCAACACAACCCTTGTTATTCTTGCACCACTCATCACAATGTGCAAAATGGATAGGACAAGAGATACAGCGAGGTACGCGCTAACTATGCCATTAGCTACCACAAAGAACCTGTGAATTTTCATAAACAATAATGAGTAACCTGGTC</genome_strand>
        <mrna_strand>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGATGGTGTTGAAAGGGTGAGGAAGTTGATGGATGACAATGGGGTTTGGAAAGAACCTGGTTGTACTTTAATTGAGGCTGATGATTATGATCTCAAGAATTTTTATTTCGATTCCAAGTGTAAACACTCTTGAGAATAAAGCTAGCAGGCACAAGCAGAGAAGTGAGCAACCAAGCTTAATGCCAAACTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGATCAATGATCAGTTTCTTGAAAGGGCCAGAGCTGACAATATGATGAGCAGCAAAAACACAAGAACTCCAATGAAGGATCCAACCAAAGAGCCAGATGCACGATCGCAGAAAGAGTTGTAGTGCTGGCAAATAGCAATCCAATTAGCACGAGCATTTCCCTTGTGTGCCAAATACACTATGGCTGCCGCAGCTGATGCTCCAGATGTTAAAAATGCCATCATCACCGTATCAAAGAAGATCAACACAACCCTTGTTATTCTTGCACCACTCATCACAATGTGCAAAATGGATAGGACAAGAGATACAGCGAGGTACGCGCTAACTATGCCATTAGCTACCACAAAGAACCTGTGAATTTTCATAAACAATAATGAGTAACCTGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>18</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2204" PGL_stop="3546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2204" e_stop="2394"/>
            <exon e_start="2512" e_stop="2688"/>
            <exon e_start="2798" e_stop="2881"/>
            <exon e_start="2959" e_stop="3168"/>
            <exon e_start="3284" e_stop="3373"/>
            <exon e_start="3447" e_stop="3546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.976" e_score="0.969"/>
          <exon-intron don_prob="0.966" acc_prob="0.413" e_score="0.989"/>
          <exon-intron don_prob="0.821" acc_prob="0.999" e_score="0.988"/>
          <exon-intron don_prob="0.991" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.786" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="2204" e_stop="2394" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.976">
            <gDNA_intron_boundary i_start="2395" i_stop="2511" i_length="117"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="2512" e_stop="2688" e_length="177"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.413">
            <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="2798" e_stop="2881" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="0.821" acc_prob="0.999">
            <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2959" e_stop="3168" e_length="210"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.994">
            <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="3284" e_stop="3373" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.786">
            <gDNA_intron_boundary i_start="3374" i_stop="3446" i_length="73"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3447" e_stop="3546" e_length="100"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2204" stop="2394"/>
              <exon start="2512" stop="2688"/>
              <exon start="2798" stop="2881"/>
              <exon start="2959" stop="3168"/>
              <exon start="3284" stop="3373"/>
              <exon start="3447" stop="3546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565327" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATGGGCACATCTATCCGTGCTGCTAGCGTTTCACCAGAGGCTATATCTGCTGCTGAAAATGAACTTTCACAGATCGCCGGAAACTTGGATAATGTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCTCTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAG : ATTGATAGCCTGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAG : GCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCT : GATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAG : CTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAG : GTAGATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAGGATACAAGAAAAAACTCGATGATTTGCATACTG</gDNA_template>
            <first_frame> K  W  A  H  L  S  V  L  L  A  F  H  Q  R  L  Y  L  L  L  K  M  N  F  H  R  S  P  E  T  W  I  M  Y  A  K  E  L  L  M  L  *  S  V  T  R  P  Q  R  R  L  F  L  L  A  R  W  N  *  P  N  A  K  K  R :   L  I  A  *  S  P  N  A  M  I  *  K  S  N  W  I  P  *  E  V  H  Q  N  P  V  R  M  K  L  I  D  *  R  N  S  R  K  S  F  R  L  K  K  K  K  W  T  G  L  H  R  V  Q  N  S  *  K  R  R :   L  Q  N  F  K  I  K  *  R  M  Q  V  A  S  N  *  K  I  R  R  Q  R  L  L  K  Y  N  L :   I  L  I  K  R  A  Q  R  S  T  V  V  R  F  R  L  K  Q  D  R  K  *  L  K  N  *  Q  R  G  L  R  N  Q  T  K  R  R  K  I  F  L  L  R  R  R  S  Y  F  P  S  S  K  R  S  N  R  K  L  L  L  F  K  R  T  I  K  R  Y  R  S :   S  L  I  S  T  K  V  F  *  L  M  L  K  M  N  M  K  I  *  R  R  L  W  M  R  C  G  H  Q  R :   *  M  L  N  T  S  Y  K  I  *  R  R  F  I  K  I  W  N  S  K  G  K  D  T  R  K  N  S  M  I  C  I  L </first_frame>
            <second_frame>  N  G  H  I  Y  P  C  C  *  R  F  T  R  G  Y  I  C  C  *  K  *  T  F  T  D  R  R  K  L  G  *  C  T  P  K  N  Y  *  C  C  E  V  L  P  G  L  R  E  G  S  F  S  W  R  D  G  I  S  Q  M  Q  K  R   : D  *  *  P  E  V  P  M  R  *  S  K  K  A  T  G  F  L  E  K  C  I  R  T  Q  *  G  *  S  *  *  I  E  G  T  Q  E  N  H  F  G  *  R  K  R  N  G  Q  A  Y  T  G  F  K  T  A  E  R  E   : G  F  R  T  S  K  *  N  R  E  C  R  W  R  A  I  E  K  S  E  G  K  G  Y  *  N  T  I   : *  Y  *  *  K  E  H  R  D  Q  P  S  *  G  S  D  *  N  R  T  E  N  D  *  K  T  D  K  G  D  *  G  I  K  Q  R  E  G  K  S  S  C  *  E  G  E  V  T  F  H  L  Q  R  G  R  T  E  S  F  Y  C  S  R  G  L  *  K  D  T  G   : A  H  *  S  A  Q  R  Y  S  D  *  C  *  K  *  I  *  K  F  E  E  D  Y  G  *  D  A  V  I  R   : G  R  C  *  I  Q  V  T  R  Y  E  E  G  L  *  R  F  G  T  Q  R  E  R  I  Q  E  K  T  R  *  F  A  Y   </second_frame>
            <third_frame>   M  G  T  S  I  R  A  A  S  V  S  P  E  A  I  S  A  A  E  N  E  L  S  Q  I  A  G  N  L  D  N  V  R  Q  R  I  T  D  A  V  K  C  Y  Q  A  S  E  K  A  L  S  L  G  E  M  E  L  A  K  C  K  K  E  :  I  D  S  L  K  S  Q  C  D  D  L  K  K  Q  L  D  S  L  R  S  A  S  E  P  S  K  D  E  V  N  R  L  K  E  L  K  K  I  I  S  A  E  E  K  E  M  D  R  L  T  Q  G  S  K  Q  L  K  E  K  :  A  S  E  L  Q  N  K  I  E  N  A  G  G  E  Q  L  K  N  Q  K  A  K  V  T  K  I  Q  S  :  D  I  D  K  K  S  T  E  I  N  R  R  K  V  Q  I  E  T  G  Q  K  M  I  K  K  L  T  K  G  I  E  E  S  N  K  E  K  E  N  L  L  A  E  K  E  K  L  L  S  I  F  K  E  V  E  Q  K  A  F  T  V  Q  E  D  Y  K  K  I  Q  E  :  L  I  D  Q  H  K  G  I  L  I  D  A  K  N  E  Y  E  N  L  K  K  T  M  D  E  M  R  S  S  E  :  V  D  A  E  Y  K  L  Q  D  M  K  K  V  Y  K  D  L  E  L  K  G  K  G  Y  K  K  K  L  D  D  L  H  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2206" stop="2394"/>
                    <exon start="2512" stop="2688"/>
                    <exon start="2798" stop="2881"/>
                    <exon start="2959" stop="3168"/>
                    <exon start="3284" stop="3373"/>
                    <exon start="3447" stop="3545"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGTSIRAASVSPEAISAAENELSQIAGNLDNVRQRITDAVKCYQASEKALSLGEMELAKCKKEIDSLKSQCDDLKKQLDSLRSASEPSKDEVNRLKELKKIISAEEKEMDRLTQGSKQLKEKASELQNKIENAGGEQLKNQKAKVTKIQSDIDKKSTEINRRKVQIETGQKMIKKLTKGIEESNKEKENLLAEKEKLLSIFKEVEQKAFTVQEDYKKIQELIDQHKGILIDAKNEYENLKKTMDEMRSSEVDAEYKLQDMKKVYKDLELKGKGYKKKLDDLHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3745" PGL_stop="5953"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3745" e_stop="3869"/>
            <exon e_start="3956" e_stop="4063"/>
            <exon e_start="4131" e_stop="4191"/>
            <exon e_start="4975" e_stop="5109"/>
            <exon e_start="5198" e_stop="5285"/>
            <exon e_start="5377" e_stop="5449"/>
            <exon e_start="5533" e_stop="5953"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.851" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3745" e_stop="3869" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.851">
            <gDNA_intron_boundary i_start="3870" i_stop="3955" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3956" e_stop="4063" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4131" e_stop="4191" e_length="61"/>
          </exon>
          <intron i_serial="3" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4975" e_stop="5109" e_length="135"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5198" e_stop="5285" e_length="88"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5377" e_stop="5449" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="5533" e_stop="5953" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3745" stop="3869"/>
              <exon start="3956" stop="4063"/>
              <exon start="4131" stop="4191"/>
              <exon start="4975" stop="5109"/>
              <exon start="5198" stop="5285"/>
              <exon start="5377" stop="5449"/>
              <exon start="5533" stop="5953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565834" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCAGGCAACTCTAAGTGATGTTACTCTTGGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAGAGATGAACCCAAATCTTGACTCGATTTCTGA : GTATCGGAAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAG : GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAG : ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG : ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAG : ATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG : CCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAAATTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTT</gDNA_template>
            <first_frame> L  Q  A  T  L  S  D  V  T  L  G  Q  T  C  D  L  K  T  A  L  E  T  V  S  L  L  E  S  Q  L  K  E  M  N  P  N  L  D  S  I  S  E :   Y  R  K  K  V  S  V  Y  N  E  R  V  Q  E  L  N  S  V  T  L  E  R  D  D  I  K  K  Q  Y  D  E  W  R  K  R  R :   L  D  E  F  M  E  G  F  N  T  I  S  L  K  L  K  E  M  Y  Q  :  M  I  T  L  G  G  D  A  E  L  E  L  V  D  S  L  D  P  F  S  E  G  V  V  F  S  V  R  P  P  K  K  S  W  K  N  I  A  N  L  S  G  G  E  K  :  T  L  S  S  L  A  L  V  F  A  L  H  H  Y  K  P  T  P  L  Y  V  M  D  E  I  D  A  A  L   : D  F  K  N  V  S  I  V  G  H  Y  V  K  D  R  T  K  D  A  Q  F  I  I  I  S :   L  R  N  N  M  F  E  L  A  D  R  L  V  G  I  Y  K  T  D  N  C  T  K  S  I  T  I  N  P  G  S  F  V  V  S  Q  K  A  A  *  G  C  S  R  I  S  D  H  F  L  L  S  S  L  C  *  Q  E  S  G  *  L  T  P  *  A  N  M  V  S  S  V  F  C  W  K  S  L  *  Y  V  *  F  I  *  *  V  T  E  Y  L  Q  I  *  *  M  K  V  C  V  C  S  *  W  L  L  S  I  R  I  Y  F  *  T  H  W  G  Q  S  K  F  *  C  C  T  T  L  M  G  V  F  L  S  V  T  I  S  I  L  L </first_frame>
            <second_frame>  F  R  Q  L  *  V  M  L  L  L  V  K  L  V  I  L  R  Q  L  L  R  Q  F  H  F  *  S  L  N  S  K  R  *  T  Q  I  L  T  R  F  L   : S  I  G  K  K  Y  L  C  T  M  K  E  F  K  S  L  I  L  L  L  *  S  V  M  I  L  K  N  N  M  M  S  G  E  R  E   : G  W  M  S  S  W  R  A  L  I  P  Y  L  *  N  L  K  K  C  I  R :   *  S  P  L  E  A  T  Q  N  W  N  W  W  I  L  L  I  R  F  L  K  V  L  F  S  V  L  D  L  Q  R  R  A  G  R  I  L  L  T  Y  Q  V  V  K  R :   P  S  A  H  W  L  L  F  L  H  S  T  T  I  N  P  L  H  F  M  *  W  M  R  L  M  L  L  *  :  I  L  R  M  S  R  S  L  G  I  M  *  R  T  E  L  K  M  H  S  S  *  S  *   : A  L  E  T  I  C  L  S  *  Q  I  G  *  L  V  S  T  K  Q  I  T  A  P  R  A  L  L  S  I  L  E  A  L  *  F  L  K  K  L  L  E  A  V  P  E  F  L  I  T  F  F  Y  L  P  C  A  D  K  N  L  V  D  *  H  L  K  L  T  W  *  V  L  Y  F  V  G  S  H  C  N  M  Y  S  S  S  N  E  L  R  N  T  Y  R  Y  D  K  *  K  F  V  F  V  V  N  G  Y  F  L  L  E  Y  I  F  K  H  I  G  D  S  Q  N  F  D  V  A  Q  H  *  W  E  Y  F  *  V  S  R  F  Q  F  Y   </second_frame>
            <third_frame>   S  G  N  S  K  *  C  Y  S  W  S  N  L  *  S  *  D  S  S  *  D  S  F  T  S  R  V  S  T  Q  R  D  E  P  K  S  *  L  D  F  *  :  V  S  E  K  S  I  C  V  Q  *  K  S  S  R  A  *  F  C  Y  F  R  A  *  *  Y  *  K  T  I  *  *  V  E  K  E  K  :  V  G  *  V  H  G  G  L  *  Y  H  I  F  E  T  *  R  N  V  S   : D  D  H  P  W  R  R  R  R  T  G  I  G  G  F  S  *  S  V  F  *  R  C  C  F  Q  C  *  T  S  K  E  E  L  E  E  Y  C  *  L  I  R  W  *  K   : D  P  Q  L  I  G  S  C  F  C  T  P  P  L  *  T  H  S  T  L  C  D  G  *  D  *  C  C  F  R :   F  *  E  C  L  D  R  W  A  L  C  E  G  Q  N  *  R  C  T  V  H  N  H  K  :  P  *  K  Q  Y  V  *  A  S  R  S  A  S  W  Y  L  Q  N  R  *  L  H  Q  E  H  Y  Y  Q  S  W  K  L  C  S  F  S  K  S  C  L  R  L  F  Q  N  F  *  S  L  S  F  I  F  P  V  L  T  R  I  W  L  I  N  T  L  S  *  H  G  E  F  C  I  L  L  E  V  I  V  I  C  I  V  H  L  M  S  Y  G  I  L  T  D  M  I  N  E  S  L  C  L  *  L  M  A  T  F  Y  *  N  I  F  L  N  T  L  G  T  V  K  I  L  M  L  H  N  T  N  G  S  I  S  E  C  H  D  F  N  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3745" stop="3869"/>
                    <exon start="3956" stop="4063"/>
                    <exon start="4131" stop="4191"/>
                    <exon start="4975" stop="5109"/>
                    <exon start="5198" stop="5285"/>
                    <exon start="5377" stop="5449"/>
                    <exon start="5533" stop="5653"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQATLSDVTLGQTCDLKTALETVSLLESQLKEMNPNLDSISEYRKKVSVYNERVQELNSVTLERDDIKKQYDEWRKRRLDEFMEGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVSQKAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="8304" PGL_stop="10912"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8304" e_stop="8396"/>
            <exon e_start="8730" e_stop="9122"/>
            <exon e_start="10169" e_stop="10374"/>
            <exon e_start="10494" e_stop="10912"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.865" acc_prob="0.735" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.873" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8304" e_stop="8396" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.865" acc_prob="0.735">
            <gDNA_intron_boundary i_start="8397" i_stop="8729" i_length="333"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8730" e_stop="9122" e_length="393"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10169" e_stop="10374" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.873">
            <gDNA_intron_boundary i_start="10375" i_stop="10493" i_length="119"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10494" e_stop="10912" e_length="419"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8304" stop="8396"/>
              <exon start="8730" stop="9122"/>
              <exon start="10169" stop="10374"/>
              <exon start="10494" stop="10912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAA : ATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG : GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATG : AAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGT</gDNA_template>
            <first_frame> V  Q  R  K  K  *  I  C  Y  T  R  S  M  L  K  E  *  A  G  L  M  F  S  I  M  K  G  Y  V  P  *  :  M  Q  Y  *  G  S  T  C  Q  V  Q  I  H  L  S  M  K  W  S  L  Q  L  V  C  L  S  N  I  V  H  *  T  K  W  I  E  K  D  L  *  G  T  *  R  V  I  W  S  W  F  M  W  H  N  H  V  Y  H  G  K  H  F  I  I  S  I  K  K  *  R  L  F  V  V  Q  L  Q  K  M  G  S  F  M  V  M  *  Q  Q  D  F  R  N  S  K  Y  C  *  K  D  L  W  K  M  I  A  V  E  A  K  G  I  *  I  M  F  I  Q  D  F  P  K  R  I  S  S  K  F  Q  R  F  L  :  D  T  *  N  Q  M  K  E  W  M  E  K  *  *  S  Q  *  K  C  *  R  P  L  R  N  A  Y  M  L  F  G  F  M  *  E  E  I  A  R  K  R  R  I  F  C  G  V  N  L  V  L  K  T  P  E  T  Y  C  S  C  L  T  *  L  G  N  F  K  * :   K  S  Y  G  *  R  M  *  K  V  R  E  N  V  G  L  E  E  Q  K  R  V  N  K  K  S  *  T  K  *  S  *  C  *  H  *  *  R  *  S  W  Y  Q  G  F  S  I  C  P  L  F  L  H  L  I  S  N  G  A  N  K  S  *  I  I  *  S  S  K  M  V  T  F  *  G  A  Q  L  S  Y  R  C  F  H  L  D  *  I  T  S  N  F  L  F  I  *  K  I  R  L  Y  I  V  K  H  T  C  S  S  S  T  K  S  A  R  M  S  C  K  S  I  T  I  S  F  F  F  W  D  S  H  I  N  D  K  N  K  F  *  </first_frame>
            <second_frame>  C  R  G  R  S  R  F  V  I  Q  E  V  C  *  K  N  E  L  V  *  C  S  Q  S  *  K  A  M  C  L  K :   C  S  I  E  E  A  L  V  K  S  K  F  I  *  V  *  N  G  A  Y  S  W  F  A  C  P  I  *  F  I  E  Q  N  G  *  K  K  T  C  E  E  L  R  E  *  F  G  V  G  L  C  G  T  I  M  F  I  M  G  S  T  S  S  S  V  *  K  S  K  G  S  L  W  F  N  F  K  K  W  G  L  L  W  *  C  S  S  K  I  S  E  I  P  S  I  A  R  K  I  C  G  R  *  *  L  W  R  Q  K  A  F  E  L  C  S  Y  K  I  F  P  K  E  S  P  P  S  S  R  D  F  W :   I  R  R  I  K  *  K  S  G  W  R  N  N  E  A  N  R  S  A  K  G  H  *  E  M  H  I  C  F  L  V  L  C  K  K  R  L  Q  E  K  E  E  F  F  V  E  S  I  S  C  *  R  P  Q  R  H  T  V  P  A  *  L  D  *  E  T  S  N   : E  R  V  M  D  E  G  C  E  R  *  E  K  M  L  A  *  K  S  K  K  G  *  T  R  R  V  E  Q  N  R  V  S  V  D  I  D  R  D  E  A  G  I  K  D  S  P  Y  V  H  Y  F  Y  I  S  F  Q  M  V  P  T  K  A  R  *  Y  R  V  Q  K  W  S  H  F  K  E  P  N  Y  P  T  A  V  S  I  L  I  R  S  H  Q  I  F  F  L  F  R  K  L  D  C  I  *  L  S  I  L  V  L  L  L  Q  R  V  H  A  C  H  V  N  L  L  Q  L  A  S  S  F  G  I  A  I  S  M  T  K  I  N  F  S </second_frame>
            <third_frame>   A  E  E  E  V  D  L  L  Y  K  K  Y  A  E  R  M  S  W  F  D  V  L  N  H  E  R  L  C  A  L   : N  A  V  L  R  K  H  L  S  S  P  N  S  F  E  Y  E  M  E  P  T  V  G  L  P  V  Q  Y  S  S  L  N  K  M  D  R  K  R  L  V  R  N  L  E  S  D  L  E  L  V  Y  V  A  Q  S  C  L  S  W  E  A  L  H  H  Q  Y  K  K  V  K  A  L  C  G  S  T  S  K  N  G  V  F  Y  G  N  V  A  A  R  F  Q  K  F  Q  V  L  L  E  R  F  V  E  D  D  S  C  G  G  K  R  H  L  N  Y  V  H  T  R  F  S  Q  K  N  L  L  Q  V  P  E  I  S   : G  Y  V  E  S  N  E  R  V  D  G  E  I  M  K  P  I  E  V  L  K  A  I  E  K  C  I  Y  A  F  W  F  Y  V  R  R  D  C  K  K  K  K  N  F  L  W  S  Q  S  R  V  E  D  P  R  D  I  L  F  L  P  D  L  T  R  K  L  Q  M  :  K  E  L  W  M  K  D  V  K  G  K  R  K  C  W  L  R  R  A  K  K  G  E  Q  E  E  L  N  K  I  E  L  V  L  T  L  I  E  M  K  L  V  S  R  I  L  H  M  S  I  I  S  T  S  H  F  K  W  C  Q  Q  K  L  D  N  I  E  F  K  N  G  H  I  L  R  S  P  T  I  L  P  L  F  P  S  *  L  D  H  I  K  F  S  F  Y  L  E  N  *  I  V  Y  S  *  A  Y  L  F  F  F  Y  K  E  C  T  H  V  M  *  I  Y  Y  N  *  L  L  L  L  G  *  P  Y  Q  *  Q  K  *  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8306" stop="8396"/>
                    <exon start="8730" stop="9122"/>
                    <exon start="10169" stop="10374"/>
                    <exon start="10494" stop="10751"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEEEVDLLYKKYAERMSWFDVLNHERLCALNAVLRKHLSSPNSFEYEMEPTVGLPVQYSSLNKMDRKRLVRNLESDLELVYVAQSCLSWEALHHQYKKVKALCGSTSKNGVFYGNVAARFQKFQVLLERFVEDDSCGGKRHLNYVHTRFSQKNLLQVPEISGYVESNERVDGEIMKPIEVLKAIEKCIYAFWFYVRRDCKKKKNFLWSQSRVEDPRDILFLPDLTRKLQMKELWMKDVKGKRKCWLRRAKKGEQEELNKIELVLTLIEMKLVSRILHMSIISTSHFKWCQQKLDNIEFKNGHILRSPTILPLFPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="15719" PGL_stop="22172"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15719" e_stop="16260"/>
            <exon e_start="16780" e_stop="17404"/>
            <exon e_start="18076" e_stop="18140"/>
            <exon e_start="18542" e_stop="18619"/>
            <exon e_start="18723" e_stop="18833"/>
            <exon e_start="19277" e_stop="19321"/>
            <exon e_start="19589" e_stop="19762"/>
            <exon e_start="20908" e_stop="22172"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.863" acc_prob="0.912" e_score="0.998"/>
          <exon-intron don_prob="0.908" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="15719" e_stop="16260" e_length="542"/>
          </exon>
          <intron i_serial="1" don_prob="0.863" acc_prob="0.912">
            <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16780" e_stop="17404" e_length="625"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18076" e_stop="18140" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18542" e_stop="18619" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.855">
            <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18723" e_stop="18833" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.913" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19277" e_stop="19321" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.991">
            <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19589" e_stop="19762" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20908" e_stop="22172" e_length="1265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15719" stop="16260"/>
              <exon start="16780" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="22172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567954" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTGGTTTCTACTCAGACGCTGAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG : ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG : GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG : GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG : GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG : GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG : GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG : GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAA</gDNA_template>
            <first_frame> F  L  V  S  T  Q  T  L  S  F  P  F  S  V  N  L  I  L  T  G  I  P  S  S  G  T  H  F  A  S  N  D  F  N  I  D  L  H  C  R  Y  L  L  V  F  L  F  T  I  E  Y  P  *  F  S  V  L  V  S  I  Q  L  G  F  L  Y  L  S  T  G  S  S  S  I  S  T  R  S  L  W  F  L  K  S  W  V  P  V  I  P  V  N  F  I  F  L  *  W  K  I  P  L  F  F  I  L  E  I  N  S  T  P  A  Y  P  F  S  H  L  G  P  K  S  Y  L  E  F  M  A  P  V  E  S  K  C  G  G  S  S  A  L  K  Q  Q  V  K  I  L  G  K  L  Q  V  L  M  N  R  M  M  P  Y  R  L  Q  L  K  R  A  K  R  F  *  P  C  N  R  T  Y  F  N  R :   L  Q  K  E  E  K  *  S  L  Q  *  K  A  V  L  P  M  L  L  V  L  M  M  V  G  V  V  A  Y  Q  M  L  I  S  L  T  W  I  K  I  I  M  L  L  Y  L  V  L  L  L  L  Q  L  L  M  S  I  K  I  H  R  L  L  *  A  K  I  L  L  K  V  K  E  K  S  K  G  T  W  P  M  K  G  H  P  H  F  Q  D  H  P  S  Q  P  V  A  R  L  P  L  L  *  V  P  K  E  Y  *  M  S  L  Q  K  L  R  S  S  V  K  R  H  F  *  M  *  I  R  V  K  V  *  S  M  F  L  E  R  R  S  S  L  I  C  L  H  Y  V  K  N  P  Q  H  N  P  L  W  K  R  G  M  K  I  L  K  D  Q  V  L  R  Q  T  K  R  L  K  I  L  *  I  *  M  R  N  L  L  H  W  P  E  Q  M  L  *  T  L  F  W  W  L  Q  N  A  L  H  G  L  K  Q  :  V  G  L  E  M  L  L  E  H  Y  R  K  L  W  L  D  V  A  T  E  L  W :   L  W  H  L  V  M  T  T  I  L  N  L  K  I  L  V  *  E  K  F  I  K  F  M  V  R :   M  *  K  *  L  T  S  K  L  L  L  M  V  W  I  L  F  S  L  T  A  I  C  L  D  T  L  G  T  T  F  T  E  G  T  V  W :   I  F  *  S  A  W  F  Y  F  A  K  Q  R  L  R :   F  L  G  M  F  H  V  V  G  S  A  M  E  M  E  T  *  C  S  L  L  M  I  G  I  L  L  Y  C  Q  Y  I  *  K  L  I  I  V  T  M  E  L  *  T  I  Q  D  L  S  W  *  F  I  T  S  L  I  R :   V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S  N  N  Q  P  P  Q  F  L  F  R  C  I  L  S  Q  *  *  N  *  P  T  H  L  </first_frame>
            <second_frame>  F  W  F  L  L  R  R  *  A  F  H  S  R  *  I  *  S  S  Q  G  S  L  L  R  G  P  I  L  H  Q  T  I  S  T  L  T  S  I  V  V  T  C  W  F  F  F  S  Q  S  N  T  P  N  S  L  Y  *  S  L  F  N  W  V  F  Y  T  C  Q  L  G  R  L  L  F  P  L  G  H  S  G  S  *  N  L  G  F  L  L  S  L  *  T  S  S  F  C  N  G  K  F  H  C  S  S  Y  W  K  S  I  P  P  Q  L  T  L  F  L  I  *  A  Q  K  V  I  S  N  S  W  L  Q  *  R  A  N  V  E  D  Q  A  R  *  S  N  R  *  K  F  W  G  S  C  K  C  *  *  I  G  *  C  L  T  G  Y  N  *  K  E  Q  K  G  F  S  H  A  T  G  P  T  S  T   : D  C  R  K  K  K  S  S  L  F  N  K  K  Q  S  C  R  C  Y  W  Y  L  *  W  W  E  W  *  L  I  R  C  *  Y  P  *  R  G  *  R  L  *  C  Y  C  T  *  Y  C  C  Y  S  N  Y  *  C  R  *  K  Y  T  A  C  Y  K  P  R  F  C  *  K  *  K  R  S  Q  K  G  P  G  R  *  K  G  T  P  T  F  K  I  I  H  H  S  Q  *  P  D  F  L  Y  C  K  F  Q  K  N  I  E  C  P  S  R  N  S  E  V  Q  S  R  D  T  F  E  C  E  F  A  *  K  F  S  R  C  S  W  K  E  D  P  V  L  Y  A  F  I  M  *  R  I  L  S  T  I  P  C  G  K  E  E  *  K  S  *  R  I  K  C  *  G  K  R  R  D  *  R  S  C  E  Y  R  *  E  T  S  S  I  G  R  N  K  C  Y  E  H  Y  F  G  G  F  R  M  R  S  M  V  *  N  R :   W  A  W  R  C  C  W  S  I  T  E  S  F  G  S  T  W  P  Q  S  Y   : G  C  G  T  S  L  *  Q  L  S  *  T  S  R  F  W  C  K  K  N  L  *  S  S  W  S   : G  C  R  S  D  L  L  P  S  F  Y  *  W  C  G  F  C  F  H  *  Q  P  Y  V  *  T  H  W  E  Q  H  L  R  R  E  P  C   : G  Y  F  K  A  H  G  F  I  L  Q  S  S  D  *   : G  S  L  A  C  S  M  W  W  G  L  L  W  R  W  K  L  S  V  H  C  *  *  L  A  Y  C  F  I  A  S  I  S  E  S  L  L  S  *  Q  W  N  Y  E  L  Y  K  I  C  P  G  D  S  *  H  R  S  S   : G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  I  I  S  H  L  N  F  C  L  D  V  F  S  L  N  N  K  I  D  R  L  I  * </second_frame>
            <third_frame>   S  G  F  Y  S  D  A  E  L  S  I  L  G  E  S  N  P  H  R  D  P  F  F  G  D  P  F  C  I  K  R  F  Q  H  *  P  P  L  S  L  L  V  G  F  S  F  H  N  R  I  P  L  I  L  C  T  S  L  Y  S  I  G  F  S  I  L  V  N  W  V  V  F  Y  F  H  *  V  T  L  V  L  E  I  L  G  S  C  Y  P  C  E  L  H  L  S  V  M  E  N  S  I  V  L  H  T  G  N  Q  F  H  P  S  L  P  F  F  S  F  R  P  K  K  L  S  R  I  H  G  S  S  R  E  Q  M  W  R  I  K  R  V  K  A  T  G  E  N  S  G  E  A  A  S  A  D  E  S  D  D  A  L  Q  V  T  I  E  K  S  K  K  V  L  A  M  Q  Q  D  L  L  Q  Q  :  I  A  E  R  R  K  V  V  S  S  I  K  S  S  L  A  D  A  T  G  T  Y  D  G  G  S  G  S  L  S  D  V  D  I  P  D  V  D  K  D  Y  N  V  T  V  P  S  T  A  A  T  P  I  T  D  V  D  K  N  T  P  P  A  I  S  Q  D  F  V  E  S  K  R  E  V  K  R  D  L  A  D  E  R  A  P  P  L  S  R  S  S  I  T  A  S  S  Q  T  S  S  T  V  S  S  K  R  I  L  N  V  P  P  E  T  P  K  F  S  Q  E  T  L  L  N  V  N  S  R  K  S  L  V  D  V  P  G  K  K  I  Q  S  Y  M  P  S  L  C  K  E  S  S  A  Q  S  L  V  E  K  R  N  E  N  L  E  G  S  S  A  E  A  N  E  E  T  E  D  L  V  N  I  D  E  K  P  P  P  L  A  G  T  N  V  M  N  I  I  L  V  A  S  E  C  A  P  W  S  K  T   : G  G  L  G  D  V  A  G  A  L  P  K  A  L  A  R  R  G  H  R  V  M  :  V  V  A  P  R  Y  D  N  Y  P  E  P  Q  D  S  G  V  R  K  I  Y  K  V  H  G  Q  :  D  V  E  V  T  Y  F  Q  A  F  I  D  G  V  D  F  V  F  I  D  S  H  M  F  R  H  I  G  N  N  I  Y  G  G  N  R  V  :  D  I  L  K  R  M  V  L  F  C  K  A  A  I  E  :  V  P  W  H  V  P  C  G  G  V  C  Y  G  D  G  N  L  V  F  I  A  N  D  W  H  T  A  L  L  P  V  Y  L  K  A  Y  Y  R  D  N  G  I  M  N  Y  T  R  S  V  L  V  I  H  N  I  A  H  Q  :  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K  *  S  A  T  S  I  F  V  *  M  Y  S  L  S  I  I  K  L  T  D  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15949" stop="16260"/>
                    <exon start="16780" stop="17404"/>
                    <exon start="18076" stop="18140"/>
                    <exon start="18542" stop="18619"/>
                    <exon start="18723" stop="18833"/>
                    <exon start="19277" stop="19321"/>
                    <exon start="19589" stop="19762"/>
                    <exon start="20908" stop="21864"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2364</number_coding_nucleotides>
                  <number_encoded_amino_acids>788</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTLVLEILGSCYPCELHLSVMENSIVLHTGNQFHPSLPFFSFRPKKLSRIHGSSREQMWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLADATGTYDGGSGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREVKRDLADERAPPLSRSSITASSQTSSTVSSKRILNVPPETPKFSQETLLNVNSRKSLVDVPGKKIQSYMPSLCKESSAQSLVEKRNENLEGSSAEANEETEDLVNIDEKPPPLAGTNVMNIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVHGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="29642" PGL_stop="24689"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29642" e_stop="29380"/>
            <exon e_start="29019" e_stop="28891"/>
            <exon e_start="28292" e_stop="28241"/>
            <exon e_start="28094" e_stop="28019"/>
            <exon e_start="27905" e_stop="27823"/>
            <exon e_start="26880" e_stop="26784"/>
            <exon e_start="25975" e_stop="25930"/>
            <exon e_start="25305" e_stop="25220"/>
            <exon e_start="25140" e_stop="24689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.679" e_score="1.000"/>
          <exon-intron don_prob="0.377" acc_prob="0.793" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.687" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.809" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.859" acc_prob="0.777" e_score="1.000"/>
          <exon-intron don_prob="0.596" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="29642" e_stop="29380" e_length="263"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29019" e_stop="28891" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.679">
            <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28292" e_stop="28241" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.377" acc_prob="0.793">
            <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28094" e_stop="28019" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.806" acc_prob="0.687">
            <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27905" e_stop="27823" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.809">
            <gDNA_intron_boundary i_start="27822" i_stop="26881" i_length="942"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26880" e_stop="26784" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.985" acc_prob="0.984">
            <gDNA_intron_boundary i_start="26783" i_stop="25976" i_length="808"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25975" e_stop="25930" e_length="46"/>
          </exon>
          <intron i_serial="7" don_prob="0.859" acc_prob="0.777">
            <gDNA_intron_boundary i_start="25929" i_stop="25306" i_length="624"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="25305" e_stop="25220" e_length="86"/>
          </exon>
          <intron i_serial="8" don_prob="0.596" acc_prob="0.998">
            <gDNA_intron_boundary i_start="25219" i_stop="25141" i_length="79"/>
          </intron>
          <exon e_serial="9" e_score="0.998">
            <gDNA_exon_boundary e_start="25140" e_stop="24689" e_length="452"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29642" stop="29380"/>
              <exon start="29019" stop="28891"/>
              <exon start="28292" stop="28241"/>
              <exon start="28094" stop="28019"/>
              <exon start="27905" stop="27823"/>
              <exon start="26880" stop="26784"/>
              <exon start="25975" stop="25930"/>
              <exon start="25305" stop="25220"/>
              <exon start="25140" stop="24689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAGCGAAGGATGACGGTGTCACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG : ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG : GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAG : GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCA : CTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAG : AAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAG : GAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAG : GGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTG : GATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTCTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTG</gDNA_template>
            <first_frame> *  S  E  G  *  R  C  H  L  G  Q  K  I  L  L  V  S  E  Y  S  G  N  V  A  D  K  L  C  P  N  S  K  E  A  K  S  I  D  N  W  K  E  S  S  V  L  L  S  L  N  *  G  S  I  L  R  T  L  K  F  Q  F  V  P  N  S  C  S  H  G  L  S  R  C  K  S  L  G  Y  I  R  Y  L  R  P  I  L  * :   Y  H  V  R  G  I  C  Y  Q  E  P  S  R  *  I  A  E  S  Q  I  Y  K  R  G  I  E  P  A  Y  E  I  S  G  F  K  F  A  Y  K  A  C  I  W :   A  T  I  F  E  E  V  Y  K  L  K  L  R  L  N  L  E  :  A  D  F  S  E  F  S  R  F  Y  D  F  V  F  F  V  F  R  E  N  G  Q  K  N  I   : T  I  S  K  A  V  T  G  W  K  I  V  L  A  G  R  F  R  L  L  D  H  W  C  D  F  V  E  :  K  K  Q  R  Y  N  I  S  E  D  T  W  Q  Q  V  L  A  F  S  R  A  V  H  E  N  L  E  G  Y  D  R  E   : G  A  W  P  V  L  I  D  D  F  V  E  H  M  Y  R :   V  G  G  V  D  T  I  S  N  S  F  C  C  S  C  G  N  S  G  A  Q  P  F  E  D  S  Y  P   : G  L  I  N  F  P  G  M  K  R  K  S  C  G  N  L  Q  R  V  E  E  S  S  H  G  D  P  G  M  D  V  I  V  N  S  K  R  R  H  V  N  F  G  N  Q  N  V  D  W  T  E  N  Q  S  H  G  Y  S  E  M  V  K  A  N  S  P  L  N  H  S  A  S  P  C  A  V  E  G  C  L  S  K  G  F  A  G  L  L  S  G  P  S  C  L  Q  F  D  K  E  R  R  T  S  Y  T  *  E  G  F  *  S  C  S  L  L  Q  Y  I  R  K  W  H  F  L  F  P  E  V  E  L  G  I  C  R  F  D  M  R  K  Y  F  L  F  L  K  K  I  K  F  E  L </first_frame>
            <second_frame>  E  A  K  D  D  G  V  T  W  D  K  K  Y  Y  *  Y  Q  N  I  P  V  T  L  Q  I  N  C  A  P  I  Q  K  K  Q  N  Q  S  I  T  G  K  K  A  L  C  C  Y  L  *  I  R  V  L  Y  Y  E  P  *  N  S  S  S  F  L  I  L  V  A  M  D  S  P  A  A  N  H  L  D  I  F  D  I  Y  G  R  Y  C   : D  I  M  S  G  A  Y  A  T  R  N  L  V  D  E  L  Q  K  A  R  F  T  R  E  A  L  N  Q  L  M  K  L  V  D  S  S  L  H  I  R  H  V  F   : G  R  L  S  L  K  K  C  T  S  L  S  C  G  *  I  W  R :   Q  T  S  L  S  S  R  V  S  M  I  L  S  S  S  F  S  E  K  M  D  K  R  T  S  :  L  *  V  K  L  L  L  V  G  K  *  F  *  L  E  G  F  G  Y  L  I  T  G  A  T  L  L  R :   K  N  S  D  I  I  Y  L  R  I  L  G  S  K  F  W  P  S  V  V  L  C  M  K  I  L  K  D  M  I  G  K  :  E  L  G  L  F  *  L  M  I  L  L  S  T  C  T   : G  L  E  E  L  I  L  F  L  T  H  F  V  V  A  V  V  I  R  E  P  S  H  L  R  I  L  T  L  :  D  *  *  I  F  L  V  *  R  G  N  L  V  A  I  Y  K  E  *  K  N  H  L  M  E  I  Q  A  W  M  *  L  S  I  R  R  G  G  T  L  I  L  A  T  K  M  L  T  G  Q  K  T  S  H  M  V  T  R  K  W  L  K  Q  I  A  H  *  I  I  L  H  L  P  A  L  L  K  V  V  C  P  R  V  L  R  D  C  C  Q  A  L  H  V  C  S  L  I  K  K  G  E  L  P  I  H  K  K  V  F  D  L  V  H  Y  C  N  I  S  E  S  G  I  F  Y  F  L  K  *  N  W  G  Y  V  G  L  T  *  G  S  I  F  Y  F  *  K  K  L  N  S  N   </second_frame>
            <third_frame>   K  R  R  M  T  V  S  L  G  T  K  N  I  T  S  I  R  I  F  R  *  R  C  R  *  I  V  P  Q  F  K  R  S  K  I  N  R  *  L  E  R  K  L  C  V  A  I  F  E  L  G  F  Y  I  T  N  P  K  I  P  V  R  S  *  F  L  *  P  W  T  L  P  L  Q  I  T  W  I  Y  S  I  S  T  A  D  T  V  :  I  S  C  Q  G  H  M  L  P  G  T  *  *  M  N  C  R  K  P  D  L  Q  E  R  H  *  T  S  L  *  N  *  W  I  Q  V  C  I  *  G  M  Y  L  :  G  D  Y  L  *  R  S  V  Q  A  *  V  A  V  E  F  G   : G  R  L  L  *  V  L  A  F  L  *  F  C  L  L  R  F  Q  R  K  W  T  K  E  H  H :   Y  K  *  S  C  Y  W  L  E  N  S  F  S  W  K  V  S  A  T  *  S  L  V  R  L  C  *   : E  K  T  A  I  *  Y  I  *  G  Y  L  A  A  S  F  G  L  Q  S  C  C  A  *  K  S  *  R  I  *  S  G  R :   S  L  A  C  F  D  *  *  F  C  *  A  H  V  Q  :  G  W  R  S  *  Y  Y  F  *  L  I  L  L  *  L  W  *  F  G  S  P  A  I  *  G  F  L  P  W :   I  D  K  F  S  W  Y  E  E  E  I  L  W  Q  F  T  K  S  R  R  I  I  S  W  R  S  R  H  G  C  D  C  Q  F  E  E  E  A  R  *  F  W  Q  P  K  C  *  L  D  R  K  P  V  T  W  L  L  G  N  G  *  S  K  *  P  I  K  S  F  C  I  S  L  R  C  *  R  L  F  V  Q  G  F  C  G  T  V  V  R  P  F  M  F  A  V  *  *  R  K  E  N  F  L  Y  I  R  R  F  L  I  L  F  I  T  A  I  Y  Q  K  V  A  F  F  I  S  *  S  R  T  G  D  M  *  V  *  H  E  E  V  F  F  I  F  E  K  N  *  I  R  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28976" stop="28891"/>
                    <exon start="28292" stop="28241"/>
                    <exon start="28094" stop="28019"/>
                    <exon start="27905" stop="27823"/>
                    <exon start="26880" stop="26784"/>
                    <exon start="25975" stop="25930"/>
                    <exon start="25305" stop="25220"/>
                    <exon start="25140" stop="24824"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>840</number_coding_nucleotides>
                  <number_encoded_amino_acids>280</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IAESQIYKRGIEPAYEISGFKFAYKACIWATIFEEVYKLKLRLNLEADFSEFSRFYDFVFFVFRENGQKNITISKAVTGWKIVLAGRFRLLDHWCDFVEKKQRYNISEDTWQQVLAFSRAVHENLEGYDREGAWPVLIDDFVEHMYRVGGVDTISNSFCCSCGNSGAQPFEDSYPGLINFPGMKRKSCGNLQRVEESSHGDPGMDVIVNSKRRHVNFGNQNVDWTENQSHGYSEMVKANSPLNHSASPCAVEGCLSKGFAGLLSGPSCLQFDKERRTSYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="66495" PGL_stop="67293"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66495" e_stop="67293"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="66495" e_stop="67293" e_length="799"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66495" stop="67293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567069" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTTTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCGCTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCAAAAACTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATATGATATTGCAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGTTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAAAGATAAAAGACGATACACTAATCGTCAAGGTGGTGG</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  N  I  F  I  *  F  T  Y  S  F  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  Q  K  L  *  F  S  F  V  I  I  L  M  R  A  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  T  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  P  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  I  *  Y  C  S  N  N  I  V  K  R  V  F  R  N  I  L  N  *  F  H  V  F  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  W  W  K  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  D  V  A  K  I  K  D  D  T  L  I  V  K  V  V  </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  *  I  F  L  F  D  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  R  Y  Y  S  G  K  *  S  I  E  S  R  *  G  K  N  Y  D  F  P  S  S  S  S  *  *  G  P  E  D  *  I  S  D  G  E  R  S  T  *  I  V  D  *  L  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  P  L  *  V  D  A  F  T  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  V  K  I  M  W  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  Y  D  I  A  A  T  I  S  *  K  G  F  S  E  I  F  *  T  N  F  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  T  G  G  K  C  G  G  S  T  *  S  I  *  S  K  K  R  *  S  S  G  L  *  *  C  T  G  T  W  Q  R  *  K  T  I  H  *  S  S  R  W  W </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  K  Y  F  Y  L  I  H  I  F  F  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  A  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  T  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  M  I  L  Q  Q  Q  Y  R  E  K  G  F  Q  K  Y  S  E  L  I  S  C  L  L  V  V  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  P  E  A  N  V  V  E  A  R  D  Q  S  E  V  K  R  D  D  H  R  G  Y  N  N  A  R  G  R  G  K  D  K  R  R  Y  T  N  R  Q  G  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66497" stop="67291"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVISTKLLLAKVLYKYFYLIHIFFHNFIMSNLSKLEFVALDISGKNYLSWVLDAEIHLAAKGLDAAITQGNEASSQDKAKTMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNMILQQQYREKGFQKYSELISCLLVVEQHNALLMKNHEARPTGAAPLPEANVVEARDQSEVKRDDHRGYNNARGRGKDKRRYTNRQGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="67792" PGL_stop="68337"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67792" e_stop="68337"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="67792" e_stop="68337" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67792" stop="68337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67913" stop="68294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589179" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAAATGTATGTCTTCTTGATAGTGCTACAACACATACAATATTAAAAGAAAAGAAATGCTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  D  S  W  I  Q  D  E  *  W  K  C  M  S  S  *  *  C  Y  N  T  Y  N  I  K  R  K  E  M  L  F  *  F  G  Y  E  N  D  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  R  N  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  T  V  G  F  K  M  S  N  G  N  V  C  L  L  D  S  A  T  T  H  T  I  L  K  E  K  K  C  F  S  N  L  V  M  K  M  T  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  A  F  S  S  G  L  Y  Y  T  S  I  S  T  V  E  S  H  A  V  I  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  *  Q  L  D  S  R  *  V  M  E  M  Y  V  F  L  I  V  L  Q  H  I  Q  Y  *  K  K  R  N  A  F  L  I  W  L  *  K  *  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  C  T  I  Q  V  *  V  Q  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67793" stop="68335"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLTVGFKMSNGNVCLLDSATTHTILKEKKCFSNLVMKMTYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPAFSSGLYYTSISTVESHAVINKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="69097" PGL_stop="69206"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69097" e_stop="69206"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="69097" e_stop="69206" e_length="110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69097" stop="69206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599384" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCAAGATTTGCTGATTGTCATTTTGATGAATCAGTATACCCAACATTAGGGGGAGAACATAAGTCATTGGGAAAAGAGATAGATTGGAATTCATCATCTCTATCTCATC</gDNA_template>
            <first_frame> G  K  I  C  *  L  S  F  *  *  I  S  I  P  N  I  R  G  R  T  *  V  I  G  K  R  D  R  L  E  F  I  I  S  I  S   </first_frame>
            <second_frame>  A  R  F  A  D  C  H  F  D  E  S  V  Y  P  T  L  G  G  E  H  K  S  L  G  K  E  I  D  W  N  S  S  S  L  S  H  </second_frame>
            <third_frame>   Q  D  L  L  I  V  I  L  M  N  Q  Y  T  Q  H  *  G  E  N  I  S  H  W  E  K  R  *  I  G  I  H  H  L  Y  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="69214" PGL_stop="69336"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69214" e_stop="69336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="69214" e_stop="69336" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69214" stop="69336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600220" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGAACAAACCAATGTGAGCAAGAAGTTCAAAGAATAATTTATTTGCAGAACATTGCAAATCAGCTACCAGATGCATTTACGAATCTTCCAAGGATTACTAAATCGCATATTCCAGCTGTTAA</gDNA_template>
            <first_frame> S  N  K  P  M  *  A  R  S  S  K  N  N  L  F  A  E  H  C  K  S  A  T  R  C  I  Y  E  S  S  K  D  Y  *  I  A  Y  S  S  C  * </first_frame>
            <second_frame>  R  T  N  Q  C  E  Q  E  V  Q  R  I  I  Y  L  Q  N  I  A  N  Q  L  P  D  A  F  T  N  L  P  R  I  T  K  S  H  I  P  A  V   </second_frame>
            <third_frame>   E  Q  T  N  V  S  K  K  F  K  E  *  F  I  C  R  T  L  Q  I  S  Y  Q  M  H  L  R  I  F  Q  G  L  L  N  R  I  F  Q  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="71523" PGL_stop="69647"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71523" e_stop="71481"/>
            <exon e_start="71421" e_stop="69647"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.767"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.767">
            <gDNA_exon_boundary e_start="71523" e_stop="71481" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71480" i_stop="71422" i_length="59"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="71421" e_stop="69647" e_length="1775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71523" stop="71481"/>
              <exon start="71421" stop="69647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586539" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATTCAATGGATTTATAACACTCCCCCTTGGATGTCCATAG : GAAAAAGAGTACACATATCTCATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTCTGAATATGATGGGTCATTGATCTCAACCAGACACACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGAGCTTTATGTGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAACATATCTAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCAAGTATTGTTAGCAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGCCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGACAAAATTTTGTCTTGCCGAGATATTTCATTTCAAATTCTTTTTGCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTGCCAATGATGTTCAAATCATCAACATACACAACTATTATTACAAATTCAGACCCCGACCGTTTAATGAAAATACAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTTAGACGATTGTACCACATCCTTCCTGATTGTTTCAATCCATACAGAGACTTCAAAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGCTTCAGGCACTTTGAATGCTTCAGGAATTTTCATGAAAATATTATGGTCCAATGAGCCATATAGATAGGCCGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTTCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTCGTACAAAAATCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATTATTTCTCTGTTTACATTCGCGAACAGATTTTGGCTCAAAATCTTCATCTTGTTGCATTACTTC</gDNA_template>
            <first_frame> T  I  Q  W  I  Y  N  T  P  P  W  M  S  I   : G  K  R  V  H  I  S  H  N  T  L  *  M  L  P  H  *  K  P  Y  Q  E  N  P  T  W  D  K  T  I  V  K  E  K  S  T  T  R  I  S  L  P  L  M  K  T  L  L  D  I  S  E  T  A  H  S  N  L  V  S  Q  L  L  K  C  *  C  W  Q  C  L  S  E  *  I  S  K  I  I  T  *  T  N  L  L  N  F  Y  L  T  I  L  L  K  I  M  R  E  K  E  L  W  *  D  M  L  C  P  V  S  F  D  V  S  S  F  Q  L  S  Y  T  C  S  I  I  F  V  H  C  G  W  Y  I  L  F  Q  R  K  T  T  H  F  L  N  M  M  G  H  *  S  Q  P  D  T  L  S  T  C  F  M  D  G  Y  Y  F  C  M  I  *  R  S  G  Y  Q  C  L  L  H  *  S  P  R  Y  C  R  V  S  T  C  K  Q  I  A  C  L  *  S  S  F  M  W  I  *  *  I  P  C  I  C  V  T  N  Q  F  *  F  G  F  I  G  I  E  *  T  H  V  H  G  P  S  N  I  S  K  Y  V  F  N  T  I  P  M  S  F  C  W  G  G  T  E  S  C  Q  *  T  Y  C  K  T  D  I  W  S  S  I  V  S  K  V  H  *  C  P  D  R  T  K  I  R  S  F  I  T  K  K  L  F  I  I  L  L  R  S  K  W  I  C  I  D  A  K  R  S  Y  H  H  W  S  T  Q  W  M  *  V  I  H  V  K  T  L  *  Y  L  F  C  V  R  *  L  M  N  K  Y  S  I  *  Q  I  L  N  L  *  T  K  T  K  F  C  L  A  E  I  F  H  F  K  F  F  L  Q  T  L  N  S  F  *  K  L  F  T  S  A  N  D  V  Q  I  I  N  I  H  N  Y  Y  Y  K  F  R  P  R  P  F  N  E  N  T  G  T  N  R  V  I  F  V  P  F  L  *  Q  I  F  T  *  T  I  V  P  H  P  S  *  L  F  Q  S  I  Q  R  L  Q  K  L  Y  *  T  S  F  S  *  I  F  V  C  F  R  H  F  E  C  F  R  N  F  H  E  N  I  M  V  Q  *  A  I  *  I  G  R  D  N  V  H  *  T  H  F  K  F  F  M  N  C  Q  I  Y  E  I  S  K  G  D  C  I  Y  H  W  R  I  C  L  H  I  I  N  A  R  S  L  R  K  T  L  S  N  E  S  G  L  I  S  H  D  F  T  F  L  I  S  F  S  Y  K  N  P  F  V  P  H  W  L  D  T  F  R  C  S  D  Y  W  S  K  N  F  T  F  F  *  *  S  Q  F  S  L  N  C  I  L  P  F  W  P  I  I  S  L  F  T  F  A  N  R  F  W  L  K  I  F  I  L  L  H  Y  F </first_frame>
            <second_frame>  Q  F  N  G  F  I  T  L  P  L  G  C  P  *  :  E  K  E  Y  T  Y  L  I  I  R  F  E  C  C  L  I  K  N  L  T  R  K  T  Q  L  G  T  K  P  *  L  R  K  R  V  Q  R  V  F  R  S  P  *  *  K  L  Y  L  I  S  R  R  R  R  I  P  I  L  Y  L  N  F  S  N  V  D  V  G  N  A  L  V  N  K  S  A  R  L  S  L  E  R  I  C  *  T  S  I  S  P  F  C  *  R  S  C  V  K  K  N  F  G  E  I  C  F  V  R  S  P  L  M  Y  P  P  F  N  *  A  I  H  A  A  L  S  S  Y  I  V  V  G  I  F  F  F  K  E  K  P  H  I  F  *  I  *  W  V  I  D  L  N  Q  T  H  S  R  L  A  S  W  M  A  I  I  S  A  *  F  E  E  V  A  T  N  V  C  F  I  D  R  Q  D  I  A  V  S  P  H  V  N  K  *  P  V  C  D  R  A  L  C  G  S  D  K  Y  P  A  S  A  *  P  I  S  S  D  L  D  S  L  E  *  N  K  P  M  S  M  V  P  R  T  Y  L  S  M  C  L  T  P  F  Q  C  L  F  V  G  E  E  L  N  L  A  S  R  L  T  A  K  Q  I  S  G  Q  V  L  L  A  R  Y  I  S  A  P  I  A  L  R  *  G  V  S  S  P  R  S  S  S  S  F  S  *  G  R  N  G  S  V  L  M  P  S  D  L  T  T  I  G  V  L  N  G  C  E  L  S  M  *  K  R  F  S  I  F  S  V  Y  V  D  *  *  T  S  I  P  F  D  K  F  S  I  C  R  P  R  Q  N  F  V  L  P  R  Y  F  I  S  N  S  F  C  R  H  S  T  A  S  K  S  S  L  R  V  P  M  M  F  K  S  S  T  Y  T  T  I  I  T  N  S  D  P  D  R  L  M  K  I  Q  G  Q  I  G  S  F  L  Y  P  F  F  N  K  Y  S  L  R  R  L  Y  H  I  L  P  D  C  F  N  P  Y  R  D  F  K  S  F  I  E  Q  V  S  L  E  S  L  Y  A  S  G  T  L  N  A  S  G  I  F  M  K  I  L  W  S  N  E  P  Y  R  *  A  V  T  T  S  I  R  R  I  S  S  F  S  *  T  A  R  F  M  R  Y  L  K  V  I  A  S  T  T  G  E  Y  V  F  I  *  S  M  P  G  L  *  E  K  P  *  A  T  S  R  A  L  Y  L  M  T  S  P  F  S  F  L  F  R  T  K  I  H  L  Y  P  T  G  L  I  P  S  G  V  R  I  I  G  P  K  T  S  R  F  S  S  E  A  N  S  A  *  I  A  S  F  H  F  G  Q  L  F  L  C  L  H  S  R  T  D  F  G  S  K  S  S  S  C  C  I  T   </second_frame>
            <third_frame>   N  S  M  D  L  *  H  S  P  L  D  V  H  R :   K  K  S  T  H  I  S  *  Y  A  L  N  V  A  S  L  K  T  L  P  G  K  P  N  L  G  Q  N  H  S  *  G  K  E  Y  N  A  Y  F  A  P  P  D  E  N  F  T  *  Y  L  G  D  G  A  F  Q  S  C  I  S  T  S  Q  M  L  M  L  A  M  P  *  *  I  N  Q  Q  D  Y  H  L  N  E  F  V  E  L  L  S  H  H  F  V  E  D  H  A  *  K  R  T  L  V  R  Y  A  L  S  G  L  L  *  C  I  L  L  S  I  E  L  Y  M  Q  H  Y  L  R  T  L  W  L  V  Y  S  F  S  K  K  N  H  T  F  S  E  Y  D  G  S  L  I  S  T  R  H  T  L  D  L  L  H  G  W  L  L  F  L  H  D  L  K  K  W  L  P  M  F  A  S  L  I  A  K  I  L  P  C  L  H  M  *  T  N  S  L  F  V  I  E  L  Y  V  D  L  I  N  T  L  H  L  R  N  Q  S  V  L  I  W  I  H  W  N  R  I  N  P  C  P  W  S  L  E  H  I  *  V  C  V  *  H  H  S  N  V  F  L  L  G  R  N  *  I  L  P  V  D  L  L  Q  N  R  Y  L  V  K  Y  C  *  Q  G  T  L  V  P  R  S  H  *  D  K  E  F  H  H  Q  E  A  L  H  H  S  L  E  V  E  M  D  L  Y  *  C  Q  A  I  L  P  P  L  E  Y  S  M  D  V  S  Y  P  C  K  N  A  L  V  S  F  L  C  T  L  I  D  E  Q  V  F  H  L  T  N  S  Q  S  V  D  Q  D  K  I  L  S  C  R  D  I  S  F  Q  I  L  F  A  D  T  Q  Q  L  L  K  A  L  Y  E  C  Q  *  C  S  N  H  Q  H  T  Q  L  L  L  Q  I  Q  T  P  T  V  *  *  K  Y  R  D  K  S  G  H  F  C  T  L  S  L  T  N  I  H  L  D  D  C  T  T  S  F  L  I  V  S  I  H  T  E  T  S  K  A  L  L  N  K  F  L  L  N  L  C  M  L  Q  A  L  *  M  L  Q  E  F  S  *  K  Y  Y  G  P  M  S  H  I  D  R  P  *  Q  R  P  L  D  A  F  Q  V  F  H  E  L  P  D  L  *  D  I  *  R  *  L  H  L  P  L  E  N  M  S  S  Y  N  Q  C  Q  V  F  E  K  N  L  E  Q  R  V  G  P  Y  I  S  *  L  H  L  S  H  F  F  F  V  Q  K  S  I  C  T  P  L  A  *  Y  L  Q  V  F  G  L  L  V  Q  K  L  H  V  F  L  V  K  P  I  Q  L  E  L  H  P  S  I  L  A  N  Y  F  S  V  Y  I  R  E  Q  I  L  A  Q  N  L  H  L  V  A  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70431" stop="70027"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSIPFDKFSICRPRQNFVLPRYFISNSFCRHSTASKSSLRVPMMFKSSTYTTIITNSDPDRLMKIQGQIGSFLYPFFNKYSLRRLYHILPDCFNPYRDFKSFIEQVSLESLYASGTLNASGIFMKILWSNEPYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70006" stop="69755"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THFKFFMNCQIYEISKGDCIYHWRICLHIINARSLRKTLSNESGLISHDFTFLISFSYKNPFVPHWLDTFRCSDYWSKNFTFF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71087" stop="70854"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CILLSIELYMQHYLRTLWLVYSFSKKNHTFSEYDGSLISTRHTLDLLHGWLLFLHDLKKWLPMFASLIAKILPCLHM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="76222" PGL_stop="74625"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76222" e_stop="76160"/>
            <exon e_start="76071" e_stop="75940"/>
            <exon e_start="75862" e_stop="75574"/>
            <exon e_start="75455" e_stop="74625"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.404" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76222" e_stop="76160" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.404" acc_prob="0.916">
            <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76071" e_stop="75940" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75862" e_stop="75574" e_length="289"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="75455" e_stop="74625" e_length="831"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76222" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="74625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75724" stop="75574"/>
              <exon start="75455" stop="75196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589988" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT : GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG : GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG : GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</gDNA_template>
            <first_frame> I  S  S  F  P  N  Y  T  L  V  P  Q  A  N  T  *  K  L  Y  F  F  :  V  Q  K  W  L  F  *  L  S  F  *  W  E  F  P  S  C  F  N  Q  P  M  A  M  V  V  G  S  M  H  M  P  L  F  T  V  E  E  M  L  L  E  L  W  :  V  V  L  V  V  T  E  I  Y  T  A  R  D  T  E  R  T  L  L  R  *  V  L  L  C  S  T  T  G  *  A  V  E  R  V  F  S  *  C  V  *  M  R  G  S  T  A  C  Q  A  *  L  R  *  Q  P  P  I  S  V  H  Q  E  D  G  V  I  L  H  A  L  I  L  I  S  L  N  L  S  S  C  A  L  L  N  I  E  L  A  *  F  L  L  P  I  E   : G  Y  P  A  E  E  A  E  E  L  D  L  Q  S  M  A  T  L  T  S  T  W  F  L  *  Q  M  L  E  V  Q  G  M  Y  I  Q  Y  T  *  R  V  Q  E  L  N  G  N  Q  C  Q  E  I  G  A  K  I  G  R  I  T  L  T  L  T  A  K  A  C  P  L  R  S  L  Q  A  M  V  A  L  L  F  H  T  M  Q  L  L  V  L  G  H  L  V  R  H  F  L  E  D  N  S  V  K  T  Q  H  I  L  *  E  K  K  I  R  I  F  K  V  Y  Y  L  L  I  Y  Y  S  K  S  F  A  L  N  L  R  V  L  L  T  K  I  F  G  E  K  R  S  L  A  L  F  V  H  C  K  I  G  H  S  I  V  E  V  K  R  I  D  L  A  Y  S  F  L  G  G  Y  *  R  L  G  G  G  S  C  E  L  L  L  L  N  L  I  V  *  I  A  F  T  V  L  C  A  *  K  K  N  I  Y  F  F  F  L  L  Q  K  S  *  A  L  I  M  V  S  M  Y  V  P  I  V  S  S  Y  L  F  V  R  K  C  Y  Y  N  N  K  R  K  L  Q  V  V  L  G  A  M  S  Y  K  E  H  S  L  P  Y  H  F  L  M  M  S  S  S  K  Y  E  S  F  Y  Y  K  </first_frame>
            <second_frame>  Y  L  H  F  L  T  I  P  S  F  L  K  Q  T  H  R  N  F  I  F  L :   F  K  N  G  S  F  S  Y  P  F  N  G  N  F  P  H  V  S  I  S  P  W  L  W  W  L  D  Q  C  T  C  H  F  L  R  W  R  R  C  F  W  N  Y  G :   W  C  L  W  L  R  K  F  I  Q  H  G  I  R  N  E  H  C  C  V  E  Y  C  S  V  Q  Q  R  V  E  L  W  S  V  F  S  A  N  V  C  E  C  G  A  V  L  P  A  R  H  N  Y  G  N  S  H  Q  F  L  S  T  R  R  M  V  *  S  S  T  P  S  F  *  S  L  S  T  Y  L  L  A  H  C  S  I  *  S  W  H  S  S  C  C  L  *  K  :  G  T  L  Q  K  K  R  R  N  *  I  Y  N  Q  W  P  L  L  L  Q  L  G  S  C  N  K  C  W  R  F  R  G  C  T  F  S  I  H  K  G  F  K  N  S  M  A  T  N  V  K  K  L  G  P  K  L  A  E  *  R  L  P  *  R  P  K  L  V  L  *  G  H  Y  R  R  W  S  H  C  C  F  I  Q  C  S  S  *  F  L  V  I  W  S  D  I  F  W  R  T  I  P  L  K  R  N  I  F  F  K  K  K  K  S  E  F  S  K  Y  T  T  C  *  Y  I  I  L  R  V  L  P  *  I  *  G  F  Y  S  P  K  Y  L  G  K  S  A  V  W  H  F  L  S  I  V  K  L  V  I  Q  L  W  K  *  K  E  L  I  W  P  T  L  F  W  V  V  I  N  V  *  G  A  A  V  V  S  F  Y  C  S  I  *  *  Y  K  *  H  L  R  Y  C  V  H  R  R  K  I  S  I  F  F  F  Y  C  K  R  A  K  H  *  L  W  *  V  C  M  Y  Q  L  S  L  A  I  C  L  *  E  N  V  T  I  I  I  K  G  N  S  K  L  Y  *  V  Q  C  L  I  K  S  I  L  Y  L  T  I  S  *  *  C  L  L  L  N  M  R  V  F  T  I  K </second_frame>
            <third_frame>   I  F  I  S  *  L  Y  P  R  S  S  S  K  H  I  E  T  L  F  F   : C  S  K  M  A  L  L  A  I  L  L  M  G  I  S  L  M  F  Q  S  A  H  G  Y  G  G  W  I  N  A  H  A  T  F  Y  G  G  G  D  A  S  G  T  M   : G  G  A  C  G  Y  G  N  L  Y  S  T  G  Y  G  T  N  T  A  A  L  S  T  A  L  F  N  N  G  L  S  C  G  A  C  F  Q  L  M  C  V  N  A  G  Q  Y  C  L  P  G  I  I  T  V  T  A  T  N  F  C  P  P  G  G  W  C  D  P  P  R  P  H  F  D  L  S  Q  P  I  F  L  R  I  A  Q  Y  R  A  G  I  V  P  V  A  Y  R  R :   V  P  C  R  R  S  G  G  I  R  F  T  I  N  G  H  S  Y  F  N  L  V  L  V  T  N  V  G  G  S  G  D  V  H  S  V  Y  I  K  G  S  R  T  Q  W  Q  P  M  S  R  N  W  G  Q  N  W  Q  N  N  A  Y  L  N  G  Q  S  L  S  F  K  V  T  T  G  D  G  R  T  V  V  S  Y  N  A  A  P  S  S  W  S  F  G  Q  T  F  S  G  G  Q  F  R  *  N  A  T  Y  S  L  R  K  K  N  Q  N  F  Q  S  I  L  L  A  N  I  L  F  *  E  F  C  L  K  F  E  G  F  T  H  Q  N  I  W  G  K  A  Q  F  G  T  F  C  P  L  *  N  W  S  F  N  C  G  S  K  K  N  *  F  G  L  L  F  F  G  W  L  L  T  F  R  G  R  Q  L  *  A  F  T  A  Q  F  N  S  I  N  S  I  Y  G  I  V  C  I  E  E  K  Y  L  F  F  F  F  T  A  K  E  L  S  T  N  Y  G  E  Y  V  C  T  N  C  L  *  L  F  V  C  K  K  M  L  L  *  *  *  K  E  T  P  S  C  T  R  C  N  V  L  *  R  A  F  S  T  L  P  F  L  N  D  V  F  F  *  I  *  E  F  L  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76205" stop="76160"/>
                    <exon start="76071" stop="75940"/>
                    <exon start="75862" stop="75574"/>
                    <exon start="75455" stop="75149"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPRSSSKHIETLFFCSKMALLAILLMGISLMFQSAHGYGGWINAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNNGLSCGACFQLMCVNAGQYCLPGIITVTATNFCPPGGWCDPPRPHFDLSQPIFLRIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGSGDVHSVYIKGSRTQWQPMSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQFR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75129" stop="74929"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKIRIFKVYYLLIYYSKSFALNLRVLLTKIFGEKRSLALFVHCKIGHSIVEVKRIDLAYSFLGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="74711" PGL_stop="75157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74711" e_stop="75157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="74711" e_stop="75157" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74711" stop="75157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590324" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTACAACTTGGAGTTTCCTTTTATTATTATAGTAACATTTTCTTACAAACAAATAGCTAGAGACAATTGGTACATACATACTCACCATAATTAGTGCTTAGCTCTTTTGCAGTAAAAAAAAAAAATAGATATTTTTCTTCTATGCACACAATACCGTAAATGCTATTTATACTATTAAATTGAGCAGTAAAAGCTCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAGAGTAGGCCAAATCAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTTCCCCAAATATTTTGGTGAGTAAAACCCTCAAATTTAAGGCAAAACTCTTAGAATAATATATTAGCAAGTAGTATACTTTGAAAATTCTGATTTTTTTTTCTTAAAGAATATGTTGCGTTTTAACGGAA</gDNA_template>
            <first_frame> S  T  T  W  S  F  L  L  L  L  *  *  H  F  L  T  N  K  *  L  E  T  I  G  T  Y  I  L  T  I  I  S  A  *  L  F  C  S  K  K  K  K  *  I  F  F  F  Y  A  H  N  T  V  N  A  I  Y  T  I  K  L  S  S  K  S  S  Q  L  P  P  P  K  R  *  *  P  P  K  K  E  *  A  K  S  I  L  F  T  S  T  I  E  *  P  I  L  Q  W  T  K  S  A  K  L  R  F  S  P  N  I  L  V  S  K  T  L  K  F  K  A  K  L  L  E  *  Y  I  S  K  *  Y  T  L  K  I  L  I  F  F  S  *  R  I  C  C  V  L  T  E </first_frame>
            <second_frame>  V  Q  L  G  V  S  F  Y  Y  Y  S  N  I  F  L  Q  T  N  S  *  R  Q  L  V  H  T  Y  S  P  *  L  V  L  S  S  F  A  V  K  K  K  N  R  Y  F  S  S  M  H  T  I  P  *  M  L  F  I  L  L  N  *  A  V  K  A  H  N  C  R  P  L  N  V  N  N  H  P  K  K  S  R  P  N  Q  F  F  L  L  P  Q  L  N  D  Q  F  Y  N  G  Q  K  V  P  N  C  A  F  P  Q  I  F  W  *  V  K  P  S  N  L  R  Q  N  S  *  N  N  I  L  A  S  S  I  L  *  K  F  *  F  F  F  L  K  E  Y  V  A  F  *  R   </second_frame>
            <third_frame>   Y  N  L  E  F  P  F  I  I  I  V  T  F  S  Y  K  Q  I  A  R  D  N  W  Y  I  H  T  H  H  N  *  C  L  A  L  L  Q  *  K  K  K  I  D  I  F  L  L  C  T  Q  Y  R  K  C  Y  L  Y  Y  *  I  E  Q  *  K  L  T  T  A  A  P  *  T  L  I  T  T  Q  K  R  V  G  Q  I  N  S  F  Y  F  H  N  *  M  T  N  F  T  M  D  K  K  C  Q  T  A  L  F  P  K  Y  F  G  E  *  N  P  Q  I  *  G  K  T  L  R  I  I  Y  *  Q  V  V  Y  F  E  N  S  D  F  F  F  L  K  N  M  L  R  F  N  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="90390" PGL_stop="82032"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90390" e_stop="90124"/>
            <exon e_start="89532" e_stop="89323"/>
            <exon e_start="88621" e_stop="88559"/>
            <exon e_start="88462" e_stop="88389"/>
            <exon e_start="87114" e_stop="87019"/>
            <exon e_start="85639" e_stop="85582"/>
            <exon e_start="85510" e_stop="85406"/>
            <exon e_start="85313" e_stop="85232"/>
            <exon e_start="82999" e_stop="82978"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.689" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.718" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90390" e_stop="90124" e_length="267"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.959">
            <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89532" e_stop="89323" e_length="210"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.927">
            <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88621" e_stop="88559" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88462" e_stop="88389" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.689" acc_prob="0.907">
            <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87114" e_stop="87019" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85639" e_stop="85582" e_length="58"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.718">
            <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="85510" e_stop="85406" e_length="105"/>
          </exon>
          <intron i_serial="7" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85313" e_stop="85232" e_length="82"/>
          </exon>
          <intron i_serial="8" don_prob="0.963" acc_prob="0.990">
            <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="82999" e_stop="82978" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90390" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85232"/>
              <exon start="82999" stop="82978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT : GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG : GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG : GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA : GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG : GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG : CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG : GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG : ATGTAACAATTGCAGCTGCTGC</gDNA_template>
            <first_frame> V  E  S  Q  R  K  E  Q  V  L  K  V  R  *  K  K  *  P  D  G  G  N  R  N  P  N  R  P  M  S  T  S  G  Q  Q  Q  F  R  Y  T  Q  T  P  S  K  V  L  H  L  R  N  L  P  W  D  C  S  D  E  E  L  V  E  L  C  K  P  F  G  K  I  V  N  T  K  C  N  V  G  A  N  R  N  Q  A  F  V  E  F  :  A  D  L  N  Q  A  I  N  M  V  S  Y  Y  A  S  S  S  E  P  A  Q  V  R  G  K  T  V  Y  I  Q  Y  S  N  R  N  E  I  V  N  N  K  S  P  G  D  V  P  G  N  V  L  L  V  T  I  E  G  V  E  A  G  D  V  S  I  D  V  I  H  L  :  V  F  S  A  F  G  F  V  Q  K  I  A  T  F  E  K  A  A  G  F  Q  :  A  L  I  Q  F  S  D  V  G  T  A  S  A  A  R  E  A  L  D  G  R  S  I  P  K :   Y  L  L  P  E  H  V  N  H  C  H  L  R  I  S  Y  S  A  H  T  D  L  N  I  K  F  Q  S  H  R  S  R :   D  Y  T  N  P  Y  L  P  V  N  P  T  A  M  E  G  V  L  Q  :  P  V  V  G  P  D  G  K  K  K  E  P  E  S  N  V  L  F  A  S  L  E  N  M  Q  Y  A  V  T  V  D  V  L  N  T  :  V  F  S  A  F  G  T  V  Q  K  I  A  I  F  E  K  N  G  Q  T  Q  A  L  V  Q  Y  P   : D  V  T  I  A  A  A   </first_frame>
            <second_frame>  S  S  P  K  E  K  N  K  F  S  K  S  V  K  K  N  S  P  T  V  G  I  V  T  L  I  G  R  C  Q  H  P  G  N  S  S  S  G  T  R  R  H  R  R  K  F  F  T  S  G  I  F  H  G  I  A  A  M  K  S  *  *  S  F  A  S  P  L  V  K  L  S  I  Q  S  V  T  S  G  P  I  A  T  K  R  L  S  N  L :   L  T  L  I  R  Q  S  I  W  F  H  I  M  L  H  L  Q  S  L  L  K  F  V  A  R  R  C  T  F  N  I  L  I  G  M  K  L  S  I  I  R  V  R  E  M  F  Q  E  M  F  C  W  *  L  S  R  V  L  K  L  V  M  S  V  S  M  S  F  I  W :   Y  F  Q  P  L  V  L  F  K  R  L  L  L  L  K  R  L  Q  V  F  R :   H  *  F  N  L  V  M  L  G  Q  H  L  L  L  E  R  H  W  M  G  E  V  Y  Q   : S  T  C  F  Q  N  M  L  I  I  V  T  C  A  S  H  I  Q  H  T  R  I  L  I  S  S  F  N  L  I  E  A   : G  T  T  Q  T  L  I  S  Q  *  I  L  L  Q  W  R  G  F  F  S :   L  L  *  V  Q  M  E  R  K  R  N  P  R  V  M  C  F  L  P  L  *  K  I  C  S  M  L  L  P  L  M  S  L  T  R :   F  F  L  H  L  V  L  F  R  R  S  L  Y  L  R  R  M  V  K  P  R  H  *  F  S  I  L  :  M  *  Q  L  Q  L  L  </second_frame>
            <third_frame>   R  V  P  K  K  R  T  S  S  Q  S  P  L  K  K  I  A  R  R  W  E  S  *  P  *  S  A  D  V  N  I  R  A  T  A  V  P  V  H  A  D  T  V  E  S  S  S  P  P  E  S  S  M  G  L  Q  R  *  R  A  S  R  A  L  Q  A  L  W  *  N  C  Q  Y  K  V  *  R  R  G  Q  S  Q  P  S  V  C  R  I   : C  *  P  *  S  G  N  Q  Y  G  F  I  L  C  F  I  F  R  A  C  S  S  S  W  Q  D  G  V  H  S  I  F  *  *  E  *  N  C  Q  *  *  E  S  G  R  C  S  R  K  C  F  A  G  D  Y  R  G  C  *  S  W  *  C  Q  Y  R  C  H  S  F   : G  I  F  S  L  W  F  C  S  K  D  C  Y  F  *  K  G  C  R  F  S   : G  I  D  S  I  *  *  C  W  D  S  I  C  C  *  R  G  I  G  W  E  K  Y  T  K  :  V  P  A  S  R  T  C  *  S  L  S  L  A  H  L  I  F  S  T  H  G  S  *  Y  Q  V  S  I  S  S  K  Q  :  G  L  H  K  P  L  S  P  S  K  S  Y  C  N  G  G  G  S  S   : A  C  C  R  S  R  W  K  E  K  G  T  R  E  *  C  A  F  C  L  F  R  K  Y  A  V  C  C  Y  R  *  C  P  *  H   : G  F  F  C  I  W  Y  C  S  E  D  R  Y  I  *  E  E  W  S  N  P  G  I  S  S  V  S  * :   C  N  N  C  S  C  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90339" stop="90124"/>
                    <exon start="89532" stop="89323"/>
                    <exon start="88621" stop="88559"/>
                    <exon start="88462" stop="88389"/>
                    <exon start="87114" stop="87019"/>
                    <exon start="85639" stop="85582"/>
                    <exon start="85510" stop="85406"/>
                    <exon start="85313" stop="85232"/>
                    <exon start="82999" stop="82980"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>924</number_coding_nucleotides>
                  <number_encoded_amino_acids>308</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDGGNRNPNRPMSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90150" e_stop="90124"/>
            <exon e_start="89532" e_stop="89323"/>
            <exon e_start="88843" e_stop="88757"/>
            <exon e_start="88621" e_stop="88559"/>
            <exon e_start="88462" e_stop="88389"/>
            <exon e_start="87114" e_stop="87019"/>
            <exon e_start="86851" e_stop="86799"/>
            <exon e_start="85639" e_stop="85582"/>
            <exon e_start="85510" e_stop="85406"/>
            <exon e_start="85313" e_stop="85232"/>
            <exon e_start="82999" e_stop="82032"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.959" e_score="0.963"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.689" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.998" e_score="0.868"/>
          <exon-intron don_prob="1.000" acc_prob="0.718" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="90150" e_stop="90124" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.959">
            <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89532" e_stop="89323" e_length="210"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89322" i_stop="88844" i_length="479"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88843" e_stop="88757" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.953" acc_prob="0.927">
            <gDNA_intron_boundary i_start="88756" i_stop="88622" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88621" e_stop="88559" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88462" e_stop="88389" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.689" acc_prob="0.907">
            <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87114" e_stop="87019" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87018" i_stop="86852" i_length="167"/>
          </intron>
          <exon e_serial="7" e_score="0.868">
            <gDNA_exon_boundary e_start="86851" e_stop="86799" e_length="53"/>
          </exon>
          <intron i_serial="7" don_prob="0.716" acc_prob="0.998">
            <gDNA_intron_boundary i_start="86798" i_stop="85640" i_length="1159"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85639" e_stop="85582" e_length="58"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.718">
            <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="85510" e_stop="85406" e_length="105"/>
          </exon>
          <intron i_serial="9" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="85313" e_stop="85232" e_length="82"/>
          </exon>
          <intron i_serial="10" don_prob="0.963" acc_prob="0.990">
            <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232"/>
          </intron>
          <exon e_serial="11" e_score="0.997">
            <gDNA_exon_boundary e_start="82999" e_stop="82032" e_length="968"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90150" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88843" stop="88757"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="86851" stop="86799"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85232"/>
              <exon start="82999" stop="82032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566813" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATCGCAACCAAGCGTTTGTCGAATTT : GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG : ATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAG : GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG : GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA : GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG : GGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTA : GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG : CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG : GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG : ATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCTTGAACTTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTT</gDNA_template>
            <first_frame> N  R  N  Q  A  F  V  E  F  :  A  D  L  N  Q  A  I  N  M  V  S  Y  Y  A  S  S  S  E  P  A  Q  V  R  G  K  T  V  Y  I  Q  Y  S  N  R  N  E  I  V  N  N  K  S  P  G  D  V  P  G  N  V  L  L  V  T  I  E  G  V  E  A  G  D  V  S  I  D  V  I  H  L  :  M  V  I  I  *  D  L  L  L  E  T  F  W  I  C  N  H  V  G  H  K  P  F  Y  G  L  H  I  Q  :  V  F  S  A  F  G  F  V  Q  K  I  A  T  F  E  K  A  A  G  F  Q  :  A  L  I  Q  F  S  D  V  G  T  A  S  A  A  R  E  A  L  D  G  R  S  I  P  K :   Y  L  L  P  E  H  V  N  H  C  H  L  R  I  S  Y  S  A  H  T  D  L  N  I  K  F  Q  S  H  R  S  R :   V  *  *  S  S  A  A  K  T  Q  M  C  L  S  W  P  R   : R  T  T  Q  T  L  I  S  Q  *  I  L  L  Q  W  R  G  F  F  S :   L  L  *  V  Q  M  E  R  K  R  N  P  R  V  M  C  F  L  P  L  *  K  I  C  S  M  L  L  P  L  M  S  L  T  R :   F  F  L  H  L  V  L  F  R  R  S  L  Y  L  R  R  M  V  K  P  R  H  *  F  S  I  L  :  M  *  Q  L  Q  L  L  Q  R  T  L  *  R  D  T  A  Y  M  M  V  A  I  V  S  F  I  Y  H  T  L  V  I  L  I  *  M  Y  R  Y  R  Y  V  L  L  S  W  F  R  R  E  K  R  C  P  N  K  *  R  V  D  T  I  F  *  D  S  I  T  E  S  M  L  L  D  T  C  C  F  L  H  L  F  H  L  T  S  *  L  E  L  I  I  Q  L  C  L  I  R  H  T  V  I  K  V  E  T  T  Q  F  Q  N  Q  V  C  L  R  C  N  K  H  L  Q  S  M  P  H  Q  L  F  G  I  I  L  S  L  V  Q  C  S  H  Q  L  A  M  P  L  L  V  L  F  L  A  K  H  H  H  L  H  G  I  Q  I  C  R  V  E  D  Q  P  F  H  R  L  L  P  D  I  Q  V  I  H  M  L  H  Q  L  M  Q  L  E  Y  I  L  L  D  R  H  S  R  P  I  T  L  L  L  V  V  N  L  L  L  *  V  S  L  F  I  H  Q  P  C  R  L  E  V  F  L  L  L  G  M  H  L  I  M  V  N  R  L  P  W  G  H  *  S  C  Y  *  F  T  L  A  *  V  L  V  Q  C  R  R  G  L  V  M  S  S  V  Y  L  Q  I  L  F  F  L  E  L  H  S  *  I  L  V  F  G  L  L  D  E  L  S  *  C  L  I  *  V  W  I  K  I  I  C  I  M  S  C  L  V  T  T  V  F  L  I  D  I  L  V  L  L  L   </first_frame>
            <second_frame>  I  A  T  K  R  L  S  N  L :   L  T  L  I  R  Q  S  I  W  F  H  I  M  L  H  L  Q  S  L  L  K  F  V  A  R  R  C  T  F  N  I  L  I  G  M  K  L  S  I  I  R  V  R  E  M  F  Q  E  M  F  C  W  *  L  S  R  V  L  K  L  V  M  S  V  S  M  S  F  I  * :   W  S  L  F  K  I  F  C  W  R  H  S  G  Y  V  I  M  S  V  I  N  L  S  M  A  C  I  Y  R :   Y  F  Q  P  L  V  L  F  K  R  L  L  L  L  K  R  L  Q  V  F  R :   H  *  F  N  L  V  M  L  G  Q  H  L  L  L  E  R  H  W  M  G  E  V  Y  Q   : S  T  C  F  Q  N  M  L  I  I  V  T  C  A  S  H  I  Q  H  T  R  I  L  I  S  S  F  N  L  I  E  A   : G  F  S  E  A  R  Q  L  K  H  R  C  V  C  H  G  L  V  :  G  L  H  K  P  L  S  P  S  K  S  Y  C  N  G  G  G  S  S   : A  C  C  R  S  R  W  K  E  K  G  T  R  E  *  C  A  F  C  L  F  R  K  Y  A  V  C  C  Y  R  *  C  P  *  H   : G  F  F  C  I  W  Y  C  S  E  D  R  Y  I  *  E  E  W  S  N  P  G  I  S  S  V  S  * :   C  N  N  C  S  C  C  K  G  R  F  R  G  T  L  H  I  *  W  W  L  L  *  A  S  S  I  I  L  S  S  Y  *  S  E  C  T  G  I  D  M  C  F  *  V  G  F  E  G  K  K  D  V  P  I  N  K  E  S  T  P  Y  F  K  I  L  L  L  K  V  C  F  L  T  L  V  A  S  C  I  F  F  I  *  P  L  S  L  N  *  L  F  N  C  V  *  S  G  I  Q  *  *  K  *  R  L  H  S  S  R  I  K  F  A  C  D  A  T  S  I  C  S  P  C  R  T  S  C  L  A  *  S  S  V  W  S  S  A  V  I  S  W  L  C  R  Y  W  C  C  S  W  P  S  T  T  T  C  M  E  S  K  F  A  G  W  R  I  N  L  S  I  G  S  Y  R  I  S  R  S  F  I  C  S  T  S  L  C  N  W  S  T  S  Y  W  I  V  T  A  D  Q  S  H  C  Y  W  *  S  T  F  Y  C  K  S  A  F  S  S  I  N  H  A  A  W  R  C  S  S  S  W  A  C  T  L  S  W  L  I  G  S  H  G  D  I  E  A  V  I  N  L  R  W  L  R  F  L  F  S  V  G  V  G  L  *  C  H  L  Y  T  F  R  F  S  S  F  L  N  F  T  L  E  F  *  F  L  A  F  L  M  N  *  A  N  V  *  S  E  C  G  L  K  S  S  V  *  *  A  A  *  *  Q  R  F  F  L  L  T  Y  *  Y  C  Y  S  </second_frame>
            <third_frame>   S  Q  P  S  V  C  R  I   : C  *  P  *  S  G  N  Q  Y  G  F  I  L  C  F  I  F  R  A  C  S  S  S  W  Q  D  G  V  H  S  I  F  *  *  E  *  N  C  Q  *  *  E  S  G  R  C  S  R  K  C  F  A  G  D  Y  R  G  C  *  S  W  *  C  Q  Y  R  C  H  S  F   : D  G  H  Y  L  R  S  F  V  G  D  I  L  D  M  *  S  C  R  S  *  T  F  L  W  L  A  Y  T   : G  I  F  S  L  W  F  C  S  K  D  C  Y  F  *  K  G  C  R  F  S   : G  I  D  S  I  *  *  C  W  D  S  I  C  C  *  R  G  I  G  W  E  K  Y  T  K  :  V  P  A  S  R  T  C  *  S  L  S  L  A  H  L  I  F  S  T  H  G  S  *  Y  Q  V  S  I  S  S  K  Q  :  G  L  V  K  L  G  S  *  N  T  D  V  F  V  M  A  S  * :   D  Y  T  N  P  Y  L  P  V  N  P  T  A  M  E  G  V  L  Q  :  P  V  V  G  P  D  G  K  K  K  E  P  E  S  N  V  L  F  A  S  L  E  N  M  Q  Y  A  V  T  V  D  V  L  N  T  :  V  F  S  A  F  G  T  V  Q  K  I  A  I  F  E  K  N  G  Q  T  Q  A  L  V  Q  Y  P   : D  V  T  I  A  A  A  A  K  D  A  L  E  G  H  C  I  Y  D  G  G  Y  C  K  L  H  L  S  Y  S  R  H  T  D  L  N  V  Q  V  *  I  C  A  F  E  L  V  S  K  G  K  K  M  S  Q  *  I  K  S  R  H  H  I  L  R  F  Y  Y  *  K  Y  A  S  *  H  L  L  L  P  A  S  F  S  F  D  L  L  A  *  I  N  Y  S  I  V  S  N  Q  A  Y  S  D  K  S  R  D  Y  T  V  P  E  S  S  L  L  A  M  Q  Q  A  S  A  V  H  A  A  P  A  V  W  H  N  P  Q  S  G  P  V  Q  S  S  A  G  Y  A  A  T  G  A  V  P  G  Q  A  P  P  P  A  W  N  P  N  L  Q  G  G  G  S  T  F  P  S  A  P  T  G  Y  P  G  H  S  Y  A  P  P  A  Y  A  T  G  V  H  P  I  G  S  S  Q  Q  T  N  H  I  A  T  G  S  Q  P  F  T  V  S  Q  P  F  H  P  S  T  M  P  P  G  G  V  P  P  P  G  H  A  P  Y  H  G  *  *  A  P  M  G  T  L  K  L  L  L  I  Y  A  G  L  G  S  C  S  V  S  A  W  A  C  D  V  I  C  I  P  S  D  S  L  L  S  *  T  S  L  L  N  F  S  F  W  P  S  *  *  T  E  L  M  F  N  L  S  V  D  *  N  H  L  Y  N  E  L  L  S  N  N  G  F  S  Y  *  H  I  S  I  V  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82733" stop="82290"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INYSIVSNQAYSDKSRDYTVPESSLLAMQQASAVHAAPAVWHNPQSGPVQSSAGYAATGAVPGQAPPPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAYATGVHPIGSSQQTNHIATGSQPFTVSQPFHPSTMPPGGVPPPGHAPYHG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82738" stop="82364"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LELIIQLCLIRHTVIKVETTQFQNQVCLRCNKHLQSMPHQLFGIILSLVQCSHQLAMPLLVLFLAKHHHLHGIQICRVEDQPFHRLLPDIQVIHMLHQLMQLEYILLDRHSRPITLLLVVNLLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85638" stop="85582"/>
                    <exon start="85510" stop="85406"/>
                    <exon start="85313" stop="85232"/>
                    <exon start="82999" stop="82881"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAAAKDALEGHCIYDGGYCKLHLSYSRHTDLNVQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88828" stop="88757"/>
                    <exon start="88621" stop="88559"/>
                    <exon start="88462" stop="88389"/>
                    <exon start="87114" stop="87019"/>
                    <exon start="86851" stop="86845"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLLLETFWICNHVGHKPFYGLHIQVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90150" stop="90124"/>
                    <exon start="89532" stop="89323"/>
                    <exon start="88843" stop="88829"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLMVII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="92001" PGL_stop="92847"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92001" e_stop="92086"/>
            <exon e_start="92608" e_stop="92847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.924" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92001" e_stop="92086" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.924">
            <gDNA_intron_boundary i_start="92087" i_stop="92607" i_length="521"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92608" e_stop="92847" e_length="240"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92001" stop="92086"/>
              <exon start="92608" stop="92847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600193" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATCAACAACTGCAGCAAAATATGTGCTGTGTTTGACGGATTGGAATCGACAGCTTGTGTAGATACATTACCATTTATCCGCAG : AGTATTTTGTAATGGCTGGTCGAAGAAATAGCTATGGGAAGCGCTCCCATTCTCAGTCTGATTATGTTGACTATGGGAGAAATAAAAGGAGAAATACTGGCTCTGATAAGGACTCTTTCTCTATCGGTCCTGACGACACAGTTTACCGGTACTTATGCGATGAAAAGAAGATTGGAAGTATTATCGGCAGGGGAAGTGAGATTGTTAAGCGATTAAGGGTGGACACTAAATCTAAAATCA</gDNA_template>
            <first_frame> L  I  N  N  C  S  K  I  C  A  V  F  D  G  L  E  S  T  A  C  V  D  T  L  P  F  I  R  R :   V  F  C  N  G  W  S  K  K  *  L  W  E  A  L  P  F  S  V  *  L  C  *  L  W  E  K  *  K  E  K  Y  W  L  *  *  G  L  F  L  Y  R  S  *  R  H  S  L  P  V  L  M  R  *  K  E  D  W  K  Y  Y  R  Q  G  K  *  D  C  *  A  I  K  G  G  H  *  I  *  N   </first_frame>
            <second_frame>  *  S  T  T  A  A  K  Y  V  L  C  L  T  D  W  N  R  Q  L  V  *  I  H  Y  H  L  S  A   : E  Y  F  V  M  A  G  R  R  N  S  Y  G  K  R  S  H  S  Q  S  D  Y  V  D  Y  G  R  N  K  R  R  N  T  G  S  D  K  D  S  F  S  I  G  P  D  D  T  V  Y  R  Y  L  C  D  E  K  K  I  G  S  I  I  G  R  G  S  E  I  V  K  R  L  R  V  D  T  K  S  K  I  </second_frame>
            <third_frame>   N  Q  Q  L  Q  Q  N  M  C  C  V  *  R  I  G  I  D  S  L  C  R  Y  I  T  I  Y  P  Q  :  S  I  L  *  W  L  V  E  E  I  A  M  G  S  A  P  I  L  S  L  I  M  L  T  M  G  E  I  K  G  E  I  L  A  L  I  R  T  L  S  L  S  V  L  T  T  Q  F  T  G  T  Y  A  M  K  R  R  L  E  V  L  S  A  G  E  V  R  L  L  S  D  *  G  W  T  L  N  L  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92065" stop="92086"/>
                    <exon start="92608" stop="92846"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHYHLSAEYFVMAGRRNSYGKRSHSQSDYVDYGRNKRRNTGSDKDSFSIGPDDTVYRYLCDEKKIGSIIGRGSEIVKRLRVDTKSKI</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92620" stop="92823"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLVEEIAMGSAPILSLIMLTMGEIKGEILALIRTLSLSVLTTQFTGTYAMKRRLEVLSAGEVRLLSD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="111898" PGL_stop="110395"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111898" e_stop="111233"/>
            <exon e_start="110785" e_stop="110395"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111898" e_stop="111233" e_length="666"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="111232" i_stop="110786" i_length="447"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110785" e_stop="110395" e_length="391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111898" stop="111233"/>
              <exon start="110785" stop="110395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562739" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGATGGTGTTGAAAGGGTGAGGAAGTTGATGGATGACAATGGGGTTTGGAAAGAACCTGGTTGTACTTTAATTGAGGCTGATGATTATGATCTCAAGAATTTTTATTTCGATTCCAAGTGTAAACACTCTTGAGAATAAAGCTAGCAGGCACAAGCAGAGAAGTGAGCAACCAAGCTTAATGCCAAACTTG : GAAGTGATCAATGATCAGTTTCTTGAAAGGGCCAGAGCTGACAATATGATGAGCAGCAAAAACACAAGAACTCCAATGAAGGATCCAACCAAAGAGCCAGATGCACGATCGCAGAAAGAGTTGTAGTGCTGGCAAATAGCAATCCAATTAGCACGAGCATTTCCCTTGTGTGCCAAATACACTATGGCTGCCGCAGCTGATGCTCCAGATGTTAAAAATGCCATCATCACCGTATCAAAGAAGATCAACACAACCCTTGTTATTCTTGCACCACTCATCACAATGTGCAAAATGGATAGGACAAGAGATACAGCGAGGTACGCGCTAACTATGCCATTAGCTACCACAAAGAACCTGTGAATTTTCATAAACAATAATGAGTAACCTGGTC</gDNA_template>
            <first_frame> *  K  R  R  T  C  R  L  G  T  *  L  Y  *  D  *  L  S  M  V  I  L  K  N  V  S  L  F  L  K  I  *  G  E  *  S  I  S  L  M  K  L  L  L  L  V  Y  *  L  L  V  V  T  L  V  K  L  M  M  A  E  N  I  S  A  *  *  E  L  T  T  I  L  R  Q  T  *  G  T  M  V  V  W  W  I  C  *  R  V  Q  D  Y  *  M  K  R  L  S  S  *  T  R  W  T  L  N  L  M  L  L  Y  G  E  H  C  *  E  L  V  K  F  I  P  M  S  S  W  E  G  M  R  I  S  S  C  L  N  W  E  G  K  T  V  G  T  M  S  C  C  L  I  S  M  H  R  G  M  N  G  M  V  L  K  G  *  G  S  *  W  M  T  M  G  F  G  K  N  L  V  V  L  *  L  R  L  M  I  M  I  S  R  I  F  I  S  I  P  S  V  N  T  L  E  N  K  A  S  R  H  K  Q  R  S  E  Q  P  S  L  M  P  N  L  :  E  V  I  N  D  Q  F  L  E  R  A  R  A  D  N  M  M  S  S  K  N  T  R  T  P  M  K  D  P  T  K  E  P  D  A  R  S  Q  K  E  L  *  C  W  Q  I  A  I  Q  L  A  R  A  F  P  L  C  A  K  Y  T  M  A  A  A  A  D  A  P  D  V  K  N  A  I  I  T  V  S  K  K  I  N  T  T  L  V  I  L  A  P  L  I  T  M  C  K  M  D  R  T  R  D  T  A  R  Y  A  L  T  M  P  L  A  T  T  K  N  L  *  I  F  I  N  N  N  E  *  P  G  </first_frame>
            <second_frame>  E  R  E  G  R  V  V  L  E  H  N  Y  I  R  I  S  F  P  W  S  F  *  R  M  Y  L  S  F  *  R  Y  E  E  N  E  V  Y  P  *  *  N  Y  F  C  W  C  I  S  C  L  *  S  R  W  *  S  *  *  W  P  R  I  F  Q  H  D  E  N  *  L  Q  Y  *  D  K  H  K  A  L  W  L  Y  G  G  Y  A  S  A  C  R  T  I  E  *  S  V  *  V  H  K  H  D  G  H  *  T  *  C  Y  Y  M  E  N  T  A  R  S  L  *  S  S  F  Q  C  Q  A  G  K  V  C  E  *  A  V  A  *  I  G  K  G  R  Q  W  G  L  C  L  A  V  *  Y  L  C  I  E  G  *  M  G  W  C  *  K  G  E  E  V  D  G  *  Q  W  G  L  E  R  T  W  L  Y  F  N  *  G  *  *  L  *  S  Q  E  F  L  F  R  F  Q  V  *  T  L  L  R  I  K  L  A  G  T  S  R  E  V  S  N  Q  A  *  C  Q  T  W :   K  *  S  M  I  S  F  L  K  G  P  E  L  T  I  *  *  A  A  K  T  Q  E  L  Q  *  R  I  Q  P  K  S  Q  M  H  D  R  R  K  S  C  S  A  G  K  *  Q  S  N  *  H  E  H  F  P  C  V  P  N  T  L  W  L  P  Q  L  M  L  Q  M  L  K  M  P  S  S  P  Y  Q  R  R  S  T  Q  P  L  L  F  L  H  H  S  S  Q  C  A  K  W  I  G  Q  E  I  Q  R  G  T  R  *  L  C  H  *  L  P  Q  R  T  C  E  F  S  *  T  I  M  S  N  L  V </second_frame>
            <third_frame>   K  E  K  D  V  S  S  W  N  I  I  I  L  G  L  A  F  H  G  H  S  E  E  C  I  S  L  F  E  D  M  R  R  M  K  Y  I  P  N  E  I  T  F  V  G  V  L  V  A  C  S  H  A  G  K  V  D  D  G  R  E  Y  F  S  M  M  R  T  D  Y  N  I  E  T  N  I  R  H  Y  G  C  M  V  D  M  L  A  R  A  G  L  L  N  E  A  F  E  F  I  N  T  M  D  I  K  P  N  A  I  I  W  R  T  L  L  G  A  C  K  V  H  S  N  V  K  L  G  R  Y  A  N  K  Q  L  L  K  L  G  R  E  D  S  G  D  Y  V  L  L  S  N  I  Y  A  S  R  D  E  W  D  G  V  E  R  V  R  K  L  M  D  D  N  G  V  W  K  E  P  G  C  T  L  I  E  A  D  D  Y  D  L  K  N  F  Y  F  D  S  K  C  K  H  S  *  E  *  S  *  Q  A  Q  A  E  K  *  A  T  K  L  N  A  K  L   : G  S  D  Q  *  S  V  S  *  K  G  Q  S  *  Q  Y  D  E  Q  Q  K  H  K  N  S  N  E  G  S  N  Q  R  A  R  C  T  I  A  E  R  V  V  V  L  A  N  S  N  P  I  S  T  S  I  S  L  V  C  Q  I  H  Y  G  C  R  S  *  C  S  R  C  *  K  C  H  H  H  R  I  K  E  D  Q  H  N  P  C  Y  S  C  T  T  H  H  N  V  Q  N  G  *  D  K  R  Y  S  E  V  R  A  N  Y  A  I  S  Y  H  K  E  P  V  N  F  H  K  Q  *  *  V  T  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111896" stop="111291"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KEKDVSSWNIIILGLAFHGHSEECISLFEDMRRMKYIPNEITFVGVLVACSHAGKVDDGREYFSMMRTDYNIETNIRHYGCMVDMLARAGLLNEAFEFINTMDIKPNAIIWRTLLGACKVHSNVKLGRYANKQLLKLGREDSGDYVLLSNIYASRDEWDGVERVRKLMDDNGVWKEPGCTLIEADDYDLKNFYFDSKCKHS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110659" stop="110426"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CWQIAIQLARAFPLCAKYTMAAAADAPDVKNAIITVSKKINTTLVILAPLITMCKMDRTRDTARYALTMPLATTKNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 44 chains have been computed
$ 
$ memory statistics:
$ 36672 bytes spliced alignments in total
$ 18 spliced alignments have been stored
$ 2037 bytes was the average size of a spliced alignment
$ 23776 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1585 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 50 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:47:26
-->
