<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:09:13"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604718" ref_strand="+" ref_description="SGN-U604718 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctgcagggtggaaagagaccttatccttgacttatctactaatttaaacagaggcacaagttgagtcaataatggagagagactatgaatagactgatttctatttagcacacgtgagcattacaactccaggcataacaagggagtattttttgaaaattgcttaggtttctaaattttcatcgctgctaggctttggcatagagaattgtatctgctattacctcaccatcatgatctttgaaccatcttaatcctgtcaagtatgatcagaatggttgttgttacagttgtactactcaatactgtcaaactggaagtgcagagatcttttgtttcgtattacgaaggcaggaaagagtgaatgctgatgaaaactggtgtatttacatctttatgtgaagggcagaaagagggtgaatgtggatggaatctggttcattacagcccatcaacatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="1334" stop="280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1040" g_stop="580" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U604718" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1040" e_stop="580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTATGAGTGGAAAGAGACCTTAACCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</genome_strand>
        <mrna_strand>GCTGCAGGGTGGAAAGAGACCTTATCCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589070" ref_strand="+" ref_description="SGN-U589070 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|194466227|gb|ACF74344.1| (e_value=7e-15) Maf-like; (*ATH) AT5G42770.1 (e_value=1e-16) | Symbol: None | Maf family protein, contains Pfam domain PF02545: Maf-like protein | chr5:17169295-17171706 FORWARD | Aliases: MJB21.15, MJB21_15; ">
      <seq>aaccgttgccctttgaagaagaggtgagaaagagagcgccaaacaaatggctccgaagaacttgtcgttcaagataatcttgggttcttcctcaatggcacgtcgcaaaatattagcggacatgggttatgaatttacagtaatgggtgctgacattgatgaaaagagcattaggaaagataatgcagaggaattagtgatagctctagcagaggcaaaggtatactacctcttctctattaccggtgtgtttggttatatggttgataaaaatgttctcaaaaatattttttctagaaaaacgattatttaagttaattgtctcctcccaccacctaatgcccctactccacaccctcatactaagtaagaaatccacttgtttcctgatgacgttttttttgtcttcgagttcatttcactggtgaagtaattggtagaagttcaccatttaggtttgaaactataatcaattttttttgtccaagtaacatgaaacaaagatcttcgtagtgtatgttattcttctaagtaacacatatcgccctataaaagtaaaaaggccaggagtaattttagtgcagttattagaggagttctgttgataattgtgtagaacatgatatcaataanaaggtcaaaattcaatattcttgtgantgnatgaganttattattttggcattcccttggcatcttttgtgttccnactaacttccaatcattctgcccatcagtgatttatgntatggnatttncatttganggnnagggnc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="4296" stop="2493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3996" g_stop="3924" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3923" i_stop="3789" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3788" g_stop="3717" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="145" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3716" i_stop="3424" i_length="293">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3423" g_stop="2793" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="776" r_length="631" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U589070" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3996" e_stop="3924"/>
          <exon e_start="3788" e_stop="3717"/>
          <exon e_start="3423" e_stop="2793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAGGTTTGCTTTTTCACCCACTCATGAACTGTTCTCCTTTATCTCAAATCTTTCTTTTAAGGATTAAAACGGAAGTTAATGTTTTCTTTAATATACTGAATGTACATGTAAATCACTAATGGTTCTATATGTTTAAAGATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATGGTACGTTCAATTTTGTTTTAAAAGATTCTGTATTTTGCTAAAACTTGCACTGTCTGTCCAGATTAAGTTTTGGACCTGCTCGGGCTCGTTTGGCGTGAGAGATTAAAAATAAAATAGTGATGAGATAAGGAATGGTGATGGATAAACTTATTCCACTATTTATATCATAGTGAATACATACTAGGATAAGTTATCCCACAATAGCTAACTCATGAGATAACTTATTTCCAATTAAACGAGCTCTTAGTTTTCTAGTGTATTGCGACTTATATTTTAATTTTTTTTTGGAGTAGGGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAAGAAGGTCAAAATTCAATATTCTTGTGATTGGATGAGATTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCGACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGTTATGGAATTTCCATTTGATGGTTAGGGAC</genome_strand>
        <mrna_strand>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG.......................................................................................................................................ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG.....................................................................................................................................................................................................................................................................................................GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAANAAGGTCAAAATTCAATATTCTTGTGANTGNATGAGANTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCNACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGNTATGGNATTTNCATTTGANGGNNAGGGNC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568417" ref_strand="+" ref_description="SGN-U568417 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157348142|emb|CAO22852.1| (e_value=2e-85) unnamed; (*ATH) AT1G75170.1 (e_value=2e-72)  Symbol: None | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein, similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylch... ; (*SWP) sp|Q9UU99|YJX4_SCHPO (e_value=2e-17) Uncharacterized protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c; ">
      <seq>gagactacaagcgtgtgaaaaattccattttccgtctgttccgtctttgtgactgttcaagtgaatgatcacctactttgcgtgatatctctacaacttcaagtggtgttgtatacttttcccacaagaattaatttctattgtgttcatgtagagtgatcgaggggatcacaggaatcatgttccggagaaagtcgtctcgcacaattcaggcagatgattctgcagcccgtggtgcaaaggttagcgagttaagagaggctgttggacctctctctgggcgaaacttaaagttctgtaccgatgtgtgtctgaggcaatacttagaagctcgaaattggaaccttgacaaggcaaaaaaaatgctcgaagagactctcaagtggagatccacctataagcctgaagaaattcgttggcatgaagtggcacatgaaagtgaaactggcaaagtttctaagggtaattttcaagaccgacttggcagaaccgtccttataatgaggcctgggaaacagaatacatcatctccggaaggtaatattcgtcatctagtctatctgatggagagtgctatccttaacctgccagaaggccaagaacaaatgtcttgnttgatagacttcaatggatggtcattgaacaccaacattcccattaaaactgcaagaaatattatctacntcttgcagaatcattatccagagaggcttgctatagttgttctttatagtccacctaganttttcgaggcattttggnaanancaagtttgngtatcccaataacaaagatagcgnnnnttnangaagacttttttcgatnctgngaatcttccaagnngagtttnggggaaangccncnttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="8053" stop="5772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7754" g_stop="7581" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7580" i_stop="7327" i_length="254">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.580" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7326" g_stop="7259" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="242" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7258" i_stop="7034" i_length="225">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7033" g_stop="6857" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="419" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6856" i_stop="6695" i_length="162">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6694" g_stop="6596" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="518" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6595" i_stop="6503" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6502" g_stop="6257" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="765" r_length="247" r_score="0.967"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6256" i_stop="6149" i_length="108">
            <donor d_prob="0.960" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="6148" g_stop="6045" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="869" r_length="104" r_score="0.827"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U568417" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7754" e_stop="7581"/>
          <exon e_start="7326" e_stop="7259"/>
          <exon e_start="7033" e_stop="6857"/>
          <exon e_start="6694" e_stop="6596"/>
          <exon e_start="6502" e_stop="6257"/>
          <exon e_start="6148" e_stop="6045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGGGTGATTGTTCTTTGACCTTTTCCATCTATATACACTTTGTACTCTCAACTTTGTCATGAACTAACCAAGATCGCGGTTATCCATCTAAAAGAATTGGATCGCTTGGTAGTATAATGTTGGAAGATCAATGATAAATTATTAATGATCTCACAATGTTCACAGCATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAGGTTAGTGTTCTTACTTTTTAAATTAAAATCTAATCTATATATCTGAAGTTTACAGACTGGAGTATCCGAATTGTTCTGTTTCATGGATGACAGAATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGGTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAGATATTATCTACATTTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGATTTTTCGAGGCATTTTGG-AAGGTAAGATTCTTCCTACAGGCGGGTTCCTTTTGGTCAATCACAATTTGATCATTCATTCTCTGTACGTAGGTAGTGAAATATTTTATTGATTCGAAAACATTTGAGAAGATCAAGTTTGTGTATCCCAATAACAAAGATAGCGTGGAGTTGATGAAGACTTTTTTCGATACTGAGAATCTTCCAAG-TGAGTTTGGGGGAAAAGCCACATTGAA</genome_strand>
        <mrna_strand>GAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCGTCTTTGTGACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAG..............................................................................................................................................................................................................................................................GAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAG.................................................................................................................................................................................................................................GTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGG..................................................................................................................................................................CATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAG.............................................................................................AATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGNTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAAATATTATCTACNTCTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGANTTTTCGAGGCATTTTGGNAAN............................................................................................................ANCAAGTTTGNGTATCCCAATAACAAAGATAGCG-NNNNTTNANGAAGACTTTTTTCGATNCTGNGAATCTTCCAAGNNGAGTTTNGGGGAAANGCCNCNTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596267" ref_strand="+" ref_description="SGN-U596267 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtctgttccctctttgtaactgttcaagtgaatgatcacctactttgcgtgatatctctacaacttcaagtggtgttgtatacttttcccacaagaattaatttctattgtgttcatgtagagtgatcgaggggatcacaggtttctctctttatttctctcttttgtatgatatctttcaagtcccaaatctttctgcaatcttcctaattcctttccaagaaaagtaatcgtttttttcttaaagtcattctcatctcttttccttttgctttatttactttttcataatccagcttatcttaccggaattctaaatttactagtggtagtcttagtgatgaagcagagtcgcatatacatgtaactgctagcaccattttttcaattaacaggaatcatgttccggagaaagtcgtctcgcacaattcaggcagatgattctgcagcccgtggtgcaaaggtaacagacaaagttatattcttacattccgatttgcttcatcaaatccaccatgacaaagtatctgtctcaattacccctagaaaatccatttaatgnttaataataactagattgaccactgggtaaatgntccattcaaattgaattgtcaggacaattaaactgagcaataactgggtagttaaaactatagaacagggnntaattttctatggcaaaccnggttagcgagttaanagaggctgntgganctctctctgggcnaanctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="8021" stop="6687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7721" g_stop="6987" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U596267" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7721" e_stop="6987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACT-GGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTT</genome_strand>
        <mrna_strand>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGNTTAATAATAACTAGATTGACCACTGGGTAAATGNTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGGTAGTTAAAACTATAGAACAGGGNNTAATTTTCTATGGCAAACCNGGTTAGCGAGTTAANAGAGGCTGNTGGANCTCTCTCTGGGCNAANCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604233" ref_strand="+" ref_description="SGN-U604233 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gaccggagagatcaaaatgaactctcgagatggtctgtgaatacctattagtatttgctaacgtggtaaatggcgataatcaatctaaccaagagatgttacggcaattcacttgaatatgttccaagttcatgaaaacagaggaagtggatgttattacagaaattatttcagtagctgaggtgggtacagctccaagtagtgaggagacacttcttattaggcatgcatgtaatgtagttgccgaaattcaacagacgattataaaccaacacctaaggaatctttgtggattgtggaattgcttgctgagatgttgacttgttaaggagacgcaggcctagtatggtgcagtattttgtactttcctcctcctctatggagacggactctggcaagtcagaacagatcattgatctaatccatcggagattcaagggtatagcagtagtaccaccaaatgtaagtgtttatccaacaatgactactaggttgtgtaaagactgcagagaggagaaagatcatttgccgttgagggtgtataagtgatatttggcatttgccaattgtgaatataagatccgtgaagcttattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="9335" stop="8140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9036" g_stop="8440" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U604233" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9036" e_stop="8440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</genome_strand>
        <mrna_strand>GACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572228" ref_strand="+" ref_description="SGN-U572228 Tomato 200607#2 [46 ESTs aligned] ">
      <seq>cggcaagaggagatatttttcttctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctatatatagcctgtaattagatagtttctccagtcattctagccttcttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaatcagggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagttttctgaggttaatgattttacttctgtttcagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="11502" stop="8891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11200" g_stop="10407" g_length="794"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="806" r_length="794" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10406" i_stop="10302" i_length="105">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10301" g_stop="9191" g_length="1111"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="1917" r_length="1111" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U572228" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1905</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11200" e_stop="10407"/>
          <exon e_start="10301" e_stop="9191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</genome_strand>
        <mrna_strand>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG.........................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATCAGGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572227" ref_strand="+" ref_description="SGN-U572227 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>aggattctatccgccgcctcgcaaataagtcggttgacaatctctctatatatagcctgtaattagatagtttctccagtcattctagccttcttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaattcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcattagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="11487" stop="8939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11187" g_stop="10719" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10718" i_stop="10460" i_length="259">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.451" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10459" g_stop="10412" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="517" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10411" i_stop="10302" i_length="110">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10301" g_stop="9239" g_length="1063"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="1581" r_length="1064" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U572227" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1580</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11187" e_stop="10719"/>
          <exon e_start="10459" e_stop="10412"/>
          <exon e_start="10301" e_stop="9239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCA-TAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</genome_strand>
        <mrna_strand>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAG...................................................................................................................................................................................................................................................................ATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT..............................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATTAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572229" ref_strand="+" ref_description="SGN-U572229 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>gctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctctatatatccttgtaattagatagtttctccagccattctagccttcttttcctccgggtaagtaacgtggattccttaagcagggttgttttgcccaaagtattgtcgatcaggtatgtacagcgtgatggctcggatgatccccccctggttgtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtctttatacgtcttctcagggaatcttggctcagatggtgtagaggagagtcttgactcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtatagttggggcataaaagccctaatatcaggggtgatgtcccgttttaaattactctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggattttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattacttaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcttgctattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="11489" stop="9213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11190" g_stop="10407" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="769" r_length="769" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10406" i_stop="10302" i_length="105">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10301" g_stop="10132" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="939" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10131" i_stop="9933" i_length="199">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9932" g_stop="9513" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="940" r_stop="1359" r_length="420" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U572229" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>1374</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11190" e_stop="10407"/>
          <exon e_start="10301" e_stop="10132"/>
          <exon e_start="9932" e_stop="9513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCC-TGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATG</genome_strand>
        <mrna_strand>GCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTCTATATATCCTTGTAATTAGATAGTTTCTCCAGCCATTCTAGCCTTCTTTTCCTCCGGGTAAGTAACGTGGATTCCTTAAGCAGG--G-T-----------T-GTTTTGCCCAAAGTATTGTCGATCAGGTATGTACAGCGTGATGGCTCGGATGATCCCCCCCTGGTTGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTTATACGTCTTCTCAGGGAATCTTGGCTCAGATGGTGTAGAGGAGAGTCTTGACTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGTTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACTCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA-TTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG.........................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG.......................................................................................................................................................................................................ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTTAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCTTGCTATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572226" ref_strand="+" ref_description="SGN-U572226 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>ggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttgggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="10845" stop="9651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10545" g_stop="9951" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U572226" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10545" e_stop="9951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTT-GGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</genome_strand>
        <mrna_strand>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596959" ref_strand="+" ref_description="SGN-U596959 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgagtatgttgttgtatgaagatatataggtgtataatcgggatatagaaggcctactatcagggggtcatgtcctgtttatattactttgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctaactttaatataaaatggatttttttggggtttcgaggggggagatggcacgggtttttttttctttttggcccgggttctctcccctcttgatgtgtgtgtgtttgtgccttttctgattcttgtttgcacgttatgctctcatcgtcagatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggtataggctaattagtttgaatttgaacttgggcaattaattagacaaaaaacgtagataactacaggttttttatatgatagccaacggaagccacttaatttgtattatcatatatattgttggtaggttctgctgttaacgccgtagaagatgatgaatatgacctttaagttttgagttttgaacatctccaaatctaacaaaaccaagcatctgtttctgaaaaatgtgcttgggcaaaatcctggaggactttagatgcgctatttggattcgggtgcatatcaagctcgtaaatatggtttgctcggattcctaataattgacgaccttagccaatatgacatgttggatcagataatcaatagtaagatctttggaactatcaaatcctaacttgtggagtctctaattggaagatgagggataagggaatgagcagacacttcgaattaggcctgccatgtaatgtaggtgccgagattcaactgatatttttgtaccaacatccaaggaaccttatggaactgcttacaggaaccttatggaattgcttgctgagatgatgacttgtgaagaggatatcggctctgtataatgcagtattttgtactttccacctcttctgcaaagatggatgggataacggtcaatctggcaaagtaagaatagattattgatctaattagtcaaggattagtggccatatttcagcggtattaccaccagctgtaaatgtcatccaacgacgactactagattgttgaagattgtagagatccattcagggagtggatgaggcgtttattctggaccttgttgtgttcagaaattttgaaatactagaggtgatcagtactagcttaagggtagtcaaaggagtacagataaccgtatatcatttctattaaggcgttacatgccaattgtaaatttaaaatctttatatgtgaacgtgaagctttgtgtattttccgtggagtataggcttgaacaaacttgtttgttcctctagtgtccgtgtattaaaacttgatttgtagtgcttggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="16370" stop="12650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16070" g_stop="15144" g_length="927"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="927" r_length="927" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15143" i_stop="13780" i_length="1364">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13779" g_stop="13691" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="928" r_stop="1016" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13690" i_stop="13578" i_length="113">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13577" g_stop="12950" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1017" r_stop="1644" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U596959" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16070" e_stop="15144"/>
          <exon e_start="13779" e_stop="13691"/>
          <exon e_start="13577" e_stop="12950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGATTCAAAAATTATGTACTGCGATCAATAAATTTCGACTTGAGTTCCAGATATCGGCCTCGACTTATCCTAACTGGGGTCATGCAGTAAGATTGGATTATTAAAAACATAGAACTGTTTTAAGTTTGTGTCTGCTAATGTCAATTAAGTCTTTGTATGAGTGGGCTGTTACTCTTCATTTCATTAGAAGTTGGACTAGAAGAATCTGCAGTGAAGATTTGCATTTAGATATCGATCGCTTTGCAAATACGGTACTGAAGTGGCGGGATGCTGCTTTTCAACTTCGAACATGTAACTGTTGCGGAACTCATGTAGAAATTTGGCAGTAGTGTGATATTTTGGGGGGGGGGGGGGATTTTAATGATGTAAAGAATTATGTTAACTACGGTAATCTTTAGGCATACTCAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGTACATGTCTTGAAGCTTAGAATTTGGGTGCAAAGACCCTTCGTATACTAATCTGTTACATGCTTCGGTATGTTACCATTTTGATCGGCTGTTTCCTCTTTTTTGTTGGTTAAATTTGTAACTATCCAGTTGTGAGACATCTAGGTGACCAAGTAAGTGTGTTCTGTACGCAATTTTTAGCTTTTTATTTATGTAATTTTAGTTTTCGCGGAGTATTTGATTCTGGAACTTGGAATCTTTTGAATGTAGAAGTCCTTTTGTGGTCTTCTGATGTAAATGCGTTTGCTTTTGTTAAAGTTGATGTAATTCTATACTTCCAGTTTGATCAAGTTTGTGAATATTCTGTATATATTTTTCAGCCAATTGAGGTATATGCTTTTGCTTCTGTTACGGTTGATGTAATTTTTTACCAGCTTGATCAAGTTTGTGAATCTTCTGTATATACTTTTCAGCCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAGGTGAGAATATTTATCAGAAATTTCAAAGTGACTTCTTGAGATGGTCTGTGTATACCTATTTCTATATAGTATTAGTATTTATGTGGTAAATAATGACAATCAGTTACATGAAGGGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</genome_strand>
        <mrna_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAG.................................................................................................................GGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596958" ref_strand="+" ref_description="SGN-U596958 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctccctgaatggatctctacaatcttcaacaatctagtagtcgtcgttggatgacatttacagctggtggtaataccgctgaaatatggccactaatccttgactaattagatcaataatctattcttactttgccagattgaccgttatcccatccatctttgcagaagaggtggaaagtacaaaatactgcattatacagagccgatatcctcttcacaagtcatcatctcagcaagcaattccataaggttcctgtaagcagttccataaggttccttggatgttggtacaaaaatatcagttgaatctcggcacctacattacatggcaggcctaattcgaagtgtctgctcattcccttatcccttcatgtaactgattgtcattatttaccacataaatactaatactatatagaaataggtatacacagaccatctcaagaagtcactttgaaatttctgataaatattctcacctcatcttccaattagagactccacaagttaggatttgatagttccaaagatcttactattgattatctgatccaacatgtcatattggctgaaaagtatatacagaagattcacaaacttgatcaagctggtaaaaaattacatcaaccgtaacagaagcaaaagcatatacctcanntggctgaaaaatatatacagaatattcacaaacttgatcaaactggaagtatagaattacntcaactttaacaaaagcaaacgcatttacntcanaanancacaaaannacttctacnttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="+" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="12910" stop="14294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13210" g_stop="13994" g_length="785"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="785" r_length="785" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="+" ref_id="SGN-U596958" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13210" e_stop="13994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCAATTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACATCAACTTTAACAAAAGCAAACGCATTTACATCAGAAGACCACAAAAGGACTTCTACATTCAAAA</genome_strand>
        <mrna_strand>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCANNTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACNTCAACTTTAACAAAAGCAAACGCATTTACNTCANAANANCACAAAANNACTTCTACNTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563950" ref_strand="+" ref_description="SGN-U563950 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>caattctggcgttcattgtggtggatgtaatcggcggaggagaactcacccaaagatcgtgggattatgcaattgagaaatcgagctaggttgcggttgagatactctgttctattgttggctgcagacgtacatcagatatgtatcacgccctgggctgtggtttggtatagacactcttttctgtaggcctgttttatgatataggcaaatccagtcaagttttatttattgttcggtcgtggtgaaaggtttgaaaaaaccgatgttatgcagacttgatagggagaactactggtatgaaagggtaatgtcaggttttagctttgctcaatatgtgctcgaaacactttacgcatgcatagtttgttcatgctattgaatttttaaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="14924" stop="13930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14624" g_stop="14230" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U563950" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14624" e_stop="14230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</genome_strand>
        <mrna_strand>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596960" ref_strand="+" ref_description="SGN-U596960 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctatccgccgcctcgaaaataattcggttgacaatctctctgtatatagcctttaatgagatggtttttcctccaggtaagtatcgtgttgctgaggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgaatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggttctgctgttaacgccgtagaagatgatgaatatgacctttaagttttgagttttgaacatctccaaatctaacaaaaccaagcatctgtttctgaaaaatgtgcttgggcaaaatcctggaggactttagatgcgctatttggattcgggtgcatatcaagctcgtaaatatggtttgctcggattcctaataattgacgaccttaggtacgcattgtaggcttcgctcgtcttttcagttgatttataattaagcatgtgcagaacagaaatactgaaacaattttgtggaatgtttttaattctatgctctcagaattttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="16464" stop="14726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16164" g_stop="15824" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15823" i_stop="15535" i_length="289">
            <donor d_prob="0.006" d_score="1.00"/>
            <acceptor a_prob="0.797" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15534" g_stop="15482" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="394" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15481" i_stop="15353" i_length="129">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15352" g_stop="15026" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="721" r_length="327" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U596960" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16164" e_stop="15824"/>
          <exon e_start="15534" e_stop="15482"/>
          <exon e_start="15352" e_stop="15026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</genome_strand>
        <mrna_strand>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGA.................................................................................................................................................................................................................................................................................................ATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAG.................................................................................................................................GTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596961" ref_strand="+" ref_description="SGN-U596961 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgagtatgttgttgtatgaagatatataggtgtataatcgggatatagaaggcctactatcagggggtcatgtcctgtttatattactttgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctaactttaatataaaatggatttttttggggtttcgaggggggagatggcacgggtttttttttctttttggcccgggttctctcccctcttgatgtgtgtgtgtttgtgccttttctgattcttgtttgcacgttatgctctcatcgtcagatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggtataggctaattagtttgaatttgaacttgggcaattaattanacaaaaaacgtanannnctacnngttttttatatgatagccnacggaagccacttaatttgtattatcatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="16370" stop="15065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16070" g_stop="15365" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U596961" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16070" e_stop="15365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATA</genome_strand>
        <mrna_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTANACAAAAAACGTANANNNCTACNNGTTTTTTATATGATAGCCNACGGAAGCCACTTAATTTGTATTATCATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567138" ref_strand="+" ref_description="SGN-U567138 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157348146|emb|CAO22856.1| (e_value=0) unnamed; (*ATH) AT5G66770.1 (e_value=0) | Symbol: None | scarecrow transcription factor family protein | chr5:26677826-26680120 FORWARD | Aliases: MUD21.1, MUD21_1; (*SWP) sp|Q8GVE1|CIGR2_ORYSJ (e_value=3e-57) Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2; ">
      <seq>ctttgtcctccttgaaaggctgagcttttctcaattaaagctaagcacttctaacccccttttcaactctctccctcttcttggggctactctgttagtccactcaaaacttgctcaccaatttcttcttataactgttgttgttgaggtaatgtgtgagtagtgtagcttagtaagatttggtgtggagaatggcctatatgtgtacggacagtgggaatctaatggcaattgctcagcaagtcataaagcaaaagcagcagcaggagcagctccaacagcaagagcaacagcagcagcagcaacaacaattcttgggtgttaatcctttgtgtctcagcccatggacttccaatcaccagaccttaactaatagccccactttaggatatggacttaccgggtcgggttttgcagacccatttcaggtcgccggaggaacagatagcgccgagccgggatttcagttccctaacttggaacatcattcgaccgggtttaggtttgctgatttcggcggtggaccgggtggtgagtttgactcagatgagtggatggagagcttgataggcggcggagattctaccggaagctctaatcttcaatctggttgcgaagcctggcagacgagttccgaattcactaccctctacggagatccgttcccgagttgtccgaatcgactcagtatcggttctgctcctccgcctccaccttcttccgatctcaatggggtcattttttcggaaacccagaaaaatctaagcccactacaaccacagacatctccatgggtcgcaccatcttcatctcctcctccaattgttcaacccgcgagcaaagaatccaaggtggtatcagttgatgtgcagccatgtagttcccctgaaagtttttcgtcaaaaccattgttgaaatccttggtggaatgtgcaagactcgctgaatcagagcctgaaaatgtagtaaaatcactgattcgactaagggaatcagtttcccaacaaggagatccaatggagcgagttgggttctatttcttagaagctctttacaataggctttcgtcgtgtcaagcagagagaactccgtcaatctttggtactgcgccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatcaggcgattcttgaagcaactgaaaaagcaacgaggattcacattgtagattttggaattgttcatggtatccaatgggcagcttttttacaagctttagcaactagatcagctggtaaaccagtcagtgttagaatctctggcattccatcagtggtattgggtaactctccgtcagcttcacttttagctacagggaatcgtcttcgtgacttcgcgaagcttctggatcttaacttcgaattcgaaccaatattgactccagttcaggaacttaacgggtctagttttcgagttgatccagatgaaatcttagctgtgaacttcatgttgcagctgtacaatttactggacgaaacaaatgttggtgtaaaaactgcactgagtttagccaaatcattgaatccaagcattgtgacattgggtgagtatgaggtgaatttgaatgatgttggattcctgcagcgatttaagaacgcactgaaatactactcaactattttcgagtcattggatccgagcttgacccgagactccgctgagagagtacaagtggaaagactgatacttggccggagaattgccggagcggtgggcctagacgatggcggaaccagaagagaatgtatggaagataaagaacattggaaagaattaatggaaggggctggttttaaaccagtaacacttagccattatgcaatgagtcaagcaaaaattcttctttggaactataattatagttcatcatttggattaattgattctgcccctgggtttctctccttggcttggaaagataatccccttttgactgtttcttcatggcactaattgtgttctacatcagttctgttaggtactttcttctaagtgcttaaatttaaatttcattgctctctgtagattaaaaagttagtatagaaagatgatatttttgagcaagtttaactttgaattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="27117" stop="24369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26817" g_stop="24669" g_length="2149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2149" r_length="2149" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U567138" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2149</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26817" e_stop="24669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTCCTCCTTGTAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTC</genome_strand>
        <mrna_strand>CTTTGTCCTCCTTGAAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCACTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580353" ref_strand="+" ref_description="SGN-U580353 Tomato 200607#2 [33 ESTs aligned] (*GB) gi|15240075|ref|NP_201477.1| (e_value=0) succinate dehydrogenase [ubiquinone], putative [Arabidopsis thaliana]; (*ATH) AT5G66760.1 (e_value=0)  Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II, identical to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavopro... ; (*SWP) sp|O82663|DHSA1_ARATH (e_value=0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1; ">
      <seq>gtttcntttagaattttaaaagaatgatatttcatattttcttgcgaaaaaacttttttttaggatttcattatattcaggtttggaatatctcaaaattaatatttttaaaataaaatttacacgttaaacgtaatactattattttaggtctacataaacataaattaattttgcgattaaattacgggtttgtcgtacagagcgtgacgtggccgtttagtaatattggttaacattangggtagttccagtaaagtgggaacataatcgtcagtcgccttatactttgtcccggtacccaaaaaaagagcatcccactttcacatccatttgattgctctacattgtattctgtacttcttcatctataactccattcaatctccgaacagaatccgcaccggcatattggtttccgatacgtttcagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacggtagtcgatcacacatatgatgcggtggtggttggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaggaagcaaggcttcctgacttttcgatcttgtagaagatgatggaatcacttgtttatgctcttatatactctacttcttgcattttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="45320" stop="37621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45020" g_stop="44494" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44493" i_stop="44055" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44054" g_stop="43887" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="694" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43886" i_stop="43349" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43348" g_stop="43261" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="782" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43260" i_stop="42905" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42904" g_stop="42758" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="929" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42757" i_stop="42570" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42569" g_stop="42429" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="930" r_stop="1070" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42428" i_stop="42134" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42133" g_stop="42048" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1071" r_stop="1156" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42047" i_stop="41959" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="41958" g_stop="41866" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1157" r_stop="1249" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="41865" i_stop="41771" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="41770" g_stop="41707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1250" r_stop="1313" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="41706" i_stop="41504" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="41503" g_stop="41360" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1314" r_stop="1457" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="41359" i_stop="40602" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="40601" g_stop="40414" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1458" r_stop="1645" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="40413" i_stop="40300" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="40299" g_stop="40125" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1646" r_stop="1820" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="40124" i_stop="40052" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="40051" g_stop="39881" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1821" r_stop="1991" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="39880" i_stop="39723" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="39722" g_stop="39653" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1992" r_stop="2061" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="39652" i_stop="39559" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="39558" g_stop="39438" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="2062" r_stop="2182" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="39437" i_stop="39350" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="39349" g_stop="39312" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="2183" r_stop="2220" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="39311" i_stop="38295" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="38294" g_stop="37921" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="2221" r_stop="2593" r_length="373" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U580353" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2595</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45020" e_stop="44494"/>
          <exon e_start="44054" e_stop="43887"/>
          <exon e_start="43348" e_stop="43261"/>
          <exon e_start="42904" e_stop="42758"/>
          <exon e_start="42569" e_stop="42429"/>
          <exon e_start="42133" e_stop="42048"/>
          <exon e_start="41958" e_stop="41866"/>
          <exon e_start="41770" e_stop="41707"/>
          <exon e_start="41503" e_stop="41360"/>
          <exon e_start="40601" e_stop="40414"/>
          <exon e_start="40299" e_stop="40125"/>
          <exon e_start="40051" e_stop="39881"/>
          <exon e_start="39722" e_stop="39653"/>
          <exon e_start="39558" e_stop="39438"/>
          <exon e_start="39349" e_stop="39312"/>
          <exon e_start="38294" e_stop="37921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCATTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGACGGTGGCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</genome_strand>
        <mrna_strand>GTTTCNTTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGAC-GTGGCCGTTTAGTAATATTGGTTAACATTANGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATA-GGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570387" ref_strand="+" ref_description="SGN-U570387 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tgagaatctgtacctagtgtgatctcacaagtggaatttggaaaggtggggtgtatgcagaccttacgccgaccttgttgaggtagaaaagtagtttctgacagatcctcggctcaagaaaagcatgatctaaaactgatctgacaaatactaaaataaaagctatagtgaaaattttatggaaatgagaagtaggggcaacaaaaacaataaagatagcctcagtaaaagagacaacaacaaaaatagctgaaaaactgaagaataggataataataataataattctgataagagggagcaaacaaggtgctctaagctagtagcctggaaccatgctctcccgtgggaaagagagaaattgcttgattacctactaaccccctctaccctgccttcatgttttcccatctttggtcatgttctcaatgagctgaagatgtgttatattatgtcttaattgtatctccccaattctttttcggtctacctctacctcttgttgggcccatcactggcagcctctctcaagtctcacctcttcattggaacttttgtgttccttctctctacatgtccnaacaatctctaatccttccttcctgcatcttttctctcgtagtgtatccntacntccntcatctcgtgaaattgatgtaatacttcaaaaaattatttttttttttgttaaaatagtattatccttcaataatnantatccatcngna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="39452" stop="38125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39152" g_stop="38426" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U570387" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39152" e_stop="38426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTA-TTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAA</genome_strand>
        <mrna_strand>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAATAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTATCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCNAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCNTACNTCCNTCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTTGTTAAAATAGTATTATCCTTCAATAATNANTATCCATCNGNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592750" ref_strand="+" ref_description="SGN-U592750 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115470493|ref|NP_001058845.1| (e_value=2e-136) Os07g0134800; (*ATH) AT5G66760.1 (e_value=6e-138)  Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II, identical to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavopro... ; (*SWP) sp|Q6ZDY8|DHSA_ORYSJ (e_value=1e-137) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1; ">
      <seq>gtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttaccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="43644" stop="39139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43344" g_stop="43261" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43260" i_stop="42905" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42904" g_stop="42758" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="231" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42757" i_stop="42570" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42569" g_stop="42429" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="372" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42428" i_stop="42134" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42133" g_stop="42048" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="458" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42047" i_stop="41959" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41958" g_stop="41866" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="551" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41865" i_stop="41771" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41770" g_stop="41707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="615" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="41706" i_stop="41504" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="41503" g_stop="41406" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="713" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="41405" i_stop="39693" i_length="1713">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="39692" g_stop="39653" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="753" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="39652" i_stop="39559" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="39558" g_stop="39438" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="873" r_length="120" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U592750" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43344" e_stop="43261"/>
          <exon e_start="42904" e_stop="42758"/>
          <exon e_start="42569" e_stop="42429"/>
          <exon e_start="42133" e_stop="42048"/>
          <exon e_start="41958" e_stop="41866"/>
          <exon e_start="41770" e_stop="41707"/>
          <exon e_start="41503" e_stop="41406"/>
          <exon e_start="39692" e_stop="39653"/>
          <exon e_start="39558" e_stop="39438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG</genome_strand>
        <mrna_strand>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTT-ATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567839" ref_strand="+" ref_description="SGN-U567839 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|119224824|dbj|BAF41219.1| (e_value=0) cytochrome; (*ATH) AT3G50660.1 (e_value=0) | Symbol: None | steroid 22-alpha-hydroxylase (CYP90B1) (DWF4), identical to gi:2935342 | chr3:18825122-18828214 REVERSE | Aliases: T3A5.40; (*SWP) sp|O64989|C90B1_ARATH (e_value=0) Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1; ">
      <seq>gcttcagaaacagagcttattgagtgttgaaactgaaaaagaagaagaaagaaatagagaagaaggaataacatcaatgtctgacttagagttttttctttttcttattcctccaatcttagcagtacttataattcttaatctattcaaaagaaaacacaactttcaaaatcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttattcagctactactattggagatttcatgcaagatcatatttctaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaatagtttcagcagatgcagggctaaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttagttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctaggctaaggaatcaacttttaagtgaagttgaaaagcatactttgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcaaagaagttaacattcaactttatggcagagcatatcatgagtctacaacctggaaatccagagacagagaagctgaaaaaagagtacatcacatttatgaaaggagtggtttctgctccattgaattttccaggaacagcttacagaaaggccttacagtctcgatcaacaattcttggatttattgagagaaaaatggaggagaggcttaaggaaatgaacagaaacgaaaacgaccttctaggttgggttctgaagaattcaaatctctcaaaagagcaaattcttgatttgctactgagtttgctctttgctggccatgaaacttcatcagtagcaatagctctgtctattttcttactcgaaagctgtcctgctgctgttcaacaattaacagaagagcacttggagatttcccgggcaaaaaaacagtcaggagaaacagaattaaattgggatgactacaagaaaatggaattcacccaatgtgttattaatgagactctaagacttgggaatgtagtgaggtttctgcacaggaaagctgtgaaagatgttcgatataaaggttatgatattccatgtggatggaaagtgttgccggtgatttcagcagcgcatttagatccttcacttttcgaccgacctcacgactttgatccttggagatggcagaacgcagaagagtcgccttcaggtaaaggaggaagcacaggcacaagcagcacaacaaaaagtagtaataatttcatgccatttgggggaggtccacgtctatgtgcaggatctgaactggccaaacttgagatggccattttcattcactatcttgttcttaattttcactggaaattagctgcaactgatcaggcttttgcctatccttacgtagattttcccaatgccctacctatcaatatccaacatcgatcgttaaataaattacatgactagccctaattcatcgtattagaatctacgttcgctcgcacatcgcatcgtctatgggtaaacattttattatattgtataaataaaaaatggtagctgaacaaatgggaaagaggatggtacttgaaatgattcaaaccaaaagagatgttttgtaaatctagctaattatctaggaggtgaagcagctgctacagtttttgttctctcttttttttttttgctttatctcttctcttgtttttttttttcttttttctttccgttacgtagtacataattttctatgtaattaaatacagcgaaattattcgattctccgtttttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="55434" stop="50324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55134" g_stop="54856" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54855" i_stop="54790" i_length="66">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54789" g_stop="54465" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="604" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54464" i_stop="54179" i_length="286">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54178" g_stop="54026" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="757" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54025" i_stop="53921" i_length="105">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53920" g_stop="53684" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="758" r_stop="994" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53683" i_stop="53598" i_length="86">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53597" g_stop="53505" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="995" r_stop="1087" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53504" i_stop="53334" i_length="171">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53333" g_stop="53255" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1088" r_stop="1166" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="53254" i_stop="53144" i_length="111">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="53143" g_stop="53037" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1167" r_stop="1273" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="53036" i_stop="51230" i_length="1807">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="51229" g_stop="50624" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1274" r_stop="1880" r_length="607" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U567839" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1879</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55134" e_stop="54856"/>
          <exon e_start="54789" e_stop="54465"/>
          <exon e_start="54178" e_stop="54026"/>
          <exon e_start="53920" e_stop="53684"/>
          <exon e_start="53597" e_stop="53505"/>
          <exon e_start="53333" e_stop="53255"/>
          <exon e_start="53143" e_stop="53037"/>
          <exon e_start="51229" e_stop="50624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAGGTACCATTATAAATCACTAGGACATGAACGTGCTTACCATCTGAACAACCCCTTTTACTTGTTCACTTATTTTCAAGTTACGAATTATTTTTCTCTTTTCAACAGTCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACAGTAAGTTCAAATAATCAAACACTTTTATAGAATTTTCTTCTAGTCCACTCTTTAATATTTTTTCAACTTGTTGGTAATAAATTTAGGAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGTGTAAGTTTATACTCTTTAGCTCTTATCAACTCATTTAAAAGATAACTGTTCGTACACAAAGTACAATTGTTTTGTTACATGTTACACACACATTAATAGTGTGAAAACTCTATATACATTGATAGTAACACATATGTAATGCTAAATTATTATTTTTTCCTTCACTTGCAGGTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAGGTATTATTGTATGATGATGCATGGCTTCAGCTTTAAAATCTGATTTGTTTTTGCCTTTTTAACAATCTTTTTGTTATTGTTCTGTTTTTCAACTTGAAAACTCAAAAAAAGGTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAGGTTAGTCAATTTGTGCATTTAAACCGACACTCAATTTAGTGTACAAAGCATCCCACGTTATTAAGGTCTTTAACTCAACTACTCTAGTGTGTGATGTATATCCAAATACAAGTATTGGTAAAAGCTTTCACGATTCAAAGTCGTAATCTATAAATCACACAAAGATAATTTTATTATTGTTCCAAGAGTTCATCCAATTTTAAAAATCTTTCATAGATAAATGTAAGTAGTAAACTAAACCTTGCAACTTTATGAGAAGAGCTAAAGGAAAGTTAAATTTGAAAGCAAAAAGTAGTTTTTAATGCATCCACCAATTTTAGTCGTCTTACGTCGTGGGATCATGTGATGAAAAATTGAAAGGAACGCACACCTCTAATTTTAAGAACCAAATATGTGCTTCAGCTTTAAGATTGGAATGTACTTATTAAGCTACGTTACGGGGATAATATTTTCCCAAAAGAGAAAACAATAATTTAATGGATAAGGGAGTGAATTAAGACTAGGTTGGGGAGAGTGGAAAAGAACATTCTATGTAGGCCGTTTGTTGAGTCGCATGATAGAACATATAAAATATCATCAATTAAAAGCAAGGTGGGATTTAGCCATCTTGGTAATCATAATAATCCATAGAAATGAACTGTCACAATCAATTCATGCACATATGCTGCTGCATTATGCACGAAGTAAAACCACACCTTAAGCTTAAAGATGTGAATTGGGTGCAAATAATATAAGCAAGGAATAAATATGGTGGGACGGACGAAATTCTCTTTTCTTTAGTTAGAGATTTTGAGTTCAAGTGTTCAGTTGGAATAGATGTGAAGAGTAATTAGTGTTCGGTTCATAGGAATGATCATTTTCAAACCTTGTGTATGTAATTAATATAATAAGTATAAACATTTGATTTAAAACTCATATCAATTGAGTCAGTAGTAAAATCCTTTAATTGAACCAATAAAGCTCACTCTTGAATTCTCCTATGGTTCTAGGACAATGACTTTAATACGTATATATTGGATGACTTCTTATTTTAGTTATTTTCTTGAGAAAAAAAATTGTCTCCATTTGAAGCAATCATTATAATAGCACTCTTTGAAATGCAATCTTTATGTTAATGTAATATGCTTTTTAGATTGAATTATCTTCTCTCTTTTTTTCGTATTTATCTTCTATCTATATAATATATTCCAACCAAAAACTAGTCCAAAGTCCTAATAGGGGAGGACCCAATCAAGGTAATTACACAATTAAAAGACTTGTCCAAACCCAACCCGCATGTGGGTGGTGGGGTTTTCATGTGCACGTGCACCTGTGCTTTTCATGGTGGCTCACCTCCACTCTACTCCATGCTGGTCCATCCATTTCCCATTCTATCCTCTGTCTTGGGGCCACAATTACATGTTATTTTAATTCCTATTTGTCAAAAATATTCAAAGTGCATTTACTGCTTTCAGCACCACTACTTGTTCCTCAATGCAGATACTCACTTATGCAATTTTCATTTTCTTCTGAAATCTAAACTTAATTATCGAATGGGAAGTACTGTACCGCACAGTGTGAAATGCATTGATAATGTCGGCAATATAGTTGAGAGGAACAAATGATACTTTATGTTTTACCATTTAAAGGGTATGAAGGATGTCAAAAAAAAGTATTTTTGTCATTTTCATTGCTTTATTCCAAATAACAAAATCTCGAGCAACTTATTGGGTACTAATAGTTAATTGAATTTGTTGTCTTTGGTTCATCGTACCAAAATGACACCTTAGATTTAAATTTAAAAGTGATGAGTAGTGTATTAATGCAGAACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTG-TTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</genome_strand>
        <mrna_strand>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG..............................................................................................................................................................................................................................................................................................TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG.........................................................................................................TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA......................................................................................GAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGT...........................................................................................................................................................................GTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAG...............................................................................................................GTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTGTTTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574325" ref_strand="+" ref_description="SGN-U574325 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|115454529|ref|NP_001050865.1| (e_value=8e-15) Os03g0669600; (*ATH) AT1G76185.1 (e_value=1e-12) | Symbol: None | expressed protein | chr1:28595219-28596412 FORWARD | Aliases: None; ">
      <seq>aatttgtttctcttaataaaatagcatactgtattaacaaaatcttctatcttatttcgtctaactgtgtactggggtcatgcgaatccctctcagtttagcattttcttcttcgttttccttttgcgttggaccagtgtaacagcttattcggagggatcgtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgggctgatgttgcagttgctttattctgcgccttgttatttggtgtgcttatattatcatcatatgtggccctttatttacgacattactggagttcctttctcattataagccttgccattacccttccagtgcgtctgagaatgttacgacaggctcatgcaagaaagaaagtaagacagttacctttgtctatgtgaacttccttctacttctggaagcaccaaacagtggtttaagtgaaaggaataccttttgcacaaaagtgctctccaattgtagtaatacagttctttgatcttcgtcacataggctgaccaatcttctgctgtgaaagatgggacacacccttcatattactcttgatgactcattcattaagaaacaggatttagacgatcaattagcttcctatgaaatgaacaaccagagctcaaggtttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="73989" stop="67324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73689" g_stop="73296" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73295" i_stop="68069" i_length="5227">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68068" g_stop="67624" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="839" r_length="445" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U574325" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73689" e_stop="73296"/>
          <exon e_start="68068" e_stop="67624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</genome_strand>
        <mrna_strand>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAACAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTTCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596222" ref_strand="+" ref_description="SGN-U596222 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgaaattgcacccaaggtgttgcctagtggtcaatgaagtgagaagagaaccatgaggtctcaagttcaaatcctagcggagataaaaagacttgggggtttcttcccatttgcctaagcctttgaggcaaaattatctggtacctatgctggtgggagataacaggtgcccaatggaataattaaggcacaagcaagcaggctcggacaccacgattattttaaaaagaagtatgctggaaattgctttttttgttttgcatgtgaataatttagagaacgccacagatgcaccaatatctccagtacacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="73828" stop="69697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73528" g_stop="73296" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73295" i_stop="70310" i_length="2986">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70309" g_stop="69997" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="546" r_length="313" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U596222" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73528" e_stop="73296"/>
          <exon e_start="70309" e_stop="69997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</genome_strand>
        <mrna_strand>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600903" ref_strand="+" ref_description="SGN-U600903 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157335336|emb|CAO61166.1| (e_value=7e-79) unnamed; (*ATH) AT2G18460.2 (e_value=9e-81) | Symbol: None | expressed protein, contains Pfam domain, PF04367: Protein of unknown function (DUF502); contains non-consensus splice sites | chr2:8008393-8009949 FORWARD | Aliases: None; ">
      <seq>gtattcatttttggggaagaagaaggagggagatctataatggcgacgccaagagcagatagggaattagagcttctcataccaatgggaggcgttgagaatattaatgctagtcactccaaatcttcttctccttctcattcccctaagattccatcttcttctaggtctcatcactcttctggcaaagaggcatttagcaaagttattcgtagctggacttggaaaaagttcatcagcggatgtgtcatcttatttcccatagccataactttttacatcacctggtggttcattcattttgtggatgccttcttttccccgatctataaccaccttggaatcaatgtatttggccttggatttgttacctccatgactttcatcttcttcgttggggtgttcatgtcctcatggttaggtgcatctcttcttagtttaggagagtggttcataaaaaaaatgcccctcatgagctacatctactctgcctccaagcaaattagctcagcaatttcaccagataaaacttcacatgccttcaaagaagtggccataataaggcatccgcgtcttgntgaatatgcatttggttttatcacttcaacagtcatacttcacaagcattcnngtgcagaggaactctgctgtgtttatgtgccaactaatcacctctatcttggnnatatctttcttgngaattctaaanacgttatgaggnccnatctctctgntcganagggtatagaaattgtaatctccgggggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="+" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="75174" stop="77411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75473" g_stop="75664" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75665" i_stop="75951" i_length="287">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75952" g_stop="76004" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="245" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76005" i_stop="76108" i_length="104">
            <donor d_prob="0.655" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76109" g_stop="76218" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="355" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76219" i_stop="76534" i_length="316">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76535" g_stop="76702" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="523" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76703" i_stop="76773" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76774" g_stop="76998" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="748" r_length="225" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="76999" i_stop="77090" i_length="92">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="77091" g_stop="77111" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="769" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="+" ref_id="SGN-U600903" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75473" e_stop="75664"/>
          <exon e_start="75952" e_stop="76004"/>
          <exon e_start="76109" e_stop="76218"/>
          <exon e_start="76535" e_stop="76702"/>
          <exon e_start="76774" e_stop="76998"/>
          <exon e_start="77091" e_stop="77111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAGGTTTCTCTCTATCATTCATACGCCATTTTGTTATCATCAATCTGATCCGTTACATTTCTCATTATATTTTCTATGGGTTAATCTGAAGCTTATTAGACTATATATAACATGAATCCTGTATTTGCCTTGACGTACTTGTATCAAATGTGCGCTTATTATTTCATGAAAATTCTCCATAAAAAATTGCGCAAAATCACAGTGATTACTTATATACTGAATTTCTATCCGGAAATCAGTCCAGGTAACATAGAGCTTGAATTGTGATGAATTTTTATCTGTCTATGCAGGCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATGGTTAGTTTTGTATTGTTCAGAAATCTGTTCCTCCTGTTGTTATGCAGTGCTTTTCTCTTTGCTGAATGGTTTATTTGCATGAATGTTCTATAATTGTTTTGCAGTGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTGGTTAGTACCTACGATCTTTATGTATTCATCTATTTAACTGTACAAAAACTGATGAAGATTAAGATTAAGATGGTTTTAAGTGTTGAATGACTGTGTGCGCGCGCCTCTCATTTTATGTATGCATACCGATACGTCTCTCCAATTTGAGTGCCTGTATTCTATATTACCATATTTAATTTGAGTATGTGGATGCTCTTCTGAGAAATGTCTACATGAAGTACTTTCAGTATCTGGTCTTTCTTTTGAGCATGAAAAGATTTATTGCTGTTGTTAAATGCACATTACATTTATGGTTAGTGTTCATATTAATTCACAGGCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAGGTATTCTACCAAAATTTGAAATTATGTTTGAACATTCCAAATACTAAACAGAATGTAGCAATTGTTTCCAGATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGGTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCAGGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGAGATATCTTTCTTGTGAATTCTAAAGACGTTATGAGGCCCAATCTCTCTGTTCGAGAGGGTATAGGTAAGAGTCTAAATTCGAGCTTTTTGACAAACTAACTTTGCAGTTTTTACCTTCATCTCTTTTTAACGACGTTTAAATTTCAAACTATGTAGAAATTGTAATCTCCGGGGGCA</genome_strand>
        <mrna_strand>GTATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAG...............................................................................................................................................................................................................................................................................................GCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATG........................................................................................................TGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTG............................................................................................................................................................................................................................................................................................................................GCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAG.......................................................................ATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGNTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCNNGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGNNATATCTTTCTTGNGAATTCTAAANACGTTATGAGGNCCNATCTCTCTGNTCGANAGGGTATAG............................................................................................AAATTGTAATCTCCGGGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581967" ref_strand="+" ref_description="SGN-U581967 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ctggcaaggaaaaattccttggtttcatgaacttacaaatgacccataccaatcttagattatttacatgctcctctataacataatattgtacttgttctcatccaaaaagaaatatatgcaagttgttgagaagagaggggaaaaaatatatcagaggcagcctccttgttccaatctgtataggtatgagttgagctcagtttctaacttgagctcatttgacaaaatcttggttgttcaatattgttgtactaaaatcagataaatgtaccaaaaaatcacaaagataagaggagaaagattggagatattttcttgtaagagcctctatccatgcattattaaccctcatttctacgtctgtatgtccagtttactcgtcgagcagtatcttttccttggtttcttgtttaaatggttgagtaatcaaacttgtggtactgcaaattttccaactctcggagataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="77926" stop="76855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77626" g_stop="77155" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U581967" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77626" e_stop="77155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGTTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</genome_strand>
        <mrna_strand>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGGTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599720" ref_strand="+" ref_description="SGN-U599720 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348153|emb|CAO22863.1| (e_value=2e-57) unnamed; (*ATH) AT2G25737.1 (e_value=5e-45) | Symbol: None | expressed protein, contains Pfam profile: PF01925 domain of unknown function DUF81 | chr2:10984014-10986978 FORWARD | Aliases: None; ">
      <seq>ggggatgcttcgcaacgtttactggaaagaattgggacttctaatgtttgtttgggtggctttccttgctattcaagttgtcaagacctacaccgtgacatgctccatcgggtactggattttaaatttattgcaggtacctgttgctgtttcggtttcgttgtatgaagcaatatgtctgtacaaggggacaagggtgattgcatcaaaaggaaaggagataacaaactggaagccacatctactcttcttttactgttgttgtggcatagttgctggtattgttggcggattgcttggtctcggaggtggcttcatccttggaccactgtttctagaacttggaattcctcctcaggtagcaagtgcaacatcaaccttttcaatgactttctcatcctctatgtcagttgtgcaatattacctattgaagcgtttccctgttccatacgctacttatttcgtttcaatagcaacaattgctgcagtagttggtcaacacgttataanaanagtanttgcactgcttggaagagcctctataatcatattcntactggncatgacaatanttaccagtgcaatcagcttnnnnggtgtgggganagcaaatatgatagagaanctnaannnnngactatatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="89103" stop="87319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88807" g_stop="88723" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88722" i_stop="88626" i_length="97">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88625" g_stop="88575" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="136" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88574" i_stop="88489" i_length="86">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88488" g_stop="88267" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="358" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88266" i_stop="88072" i_length="195">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.413" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88071" g_stop="87978" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="452" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87977" i_stop="87879" i_length="99">
            <donor d_prob="0.843" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87878" g_stop="87738" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="593" r_length="141" r_score="0.943"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87737" i_stop="87656" i_length="82">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87655" g_stop="87602" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="645" r_length="52" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U599720" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88807" e_stop="88723"/>
          <exon e_start="88625" e_stop="88575"/>
          <exon e_start="88488" e_stop="88267"/>
          <exon e_start="88071" e_stop="87978"/>
          <exon e_start="87878" e_stop="87738"/>
          <exon e_start="87655" e_stop="87602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAGGTAAACAATAATCTTTCTAGTCTCCAACACATACTCATGGTGTATATGCTGCTTCTTTATTTTTATACCAAAGGTTTATTCATTTTTTTGCTTGCAGACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAGGTAATTCCCATTTAGTTTGGGAATTAAGACAAAAACTTTTTTGAATGAGCAAGAAGGATGACGATTTGATATATGTGTTAAATTAGGTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAGTATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAGGTACATGTTGCCTTTTAATACTCCATATATTCTATCTGCTTCTTCCCTGTTTCTTCTTTCTTGTACCTATACAATAACTCTGTTCATGTAAAACCAATCGTGTTTAACTTCCATACATTGACAGTCGGGTAATACAATAACTATTACTCACAATAAGTACTCGAATTGACAAAGTGATCAAAACAAATATGGCAGGTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACGGTACGCAACATAGACAAAAAAAAATTATGAAGAAATTATCTTCACTATAACTACCTTACGAAGAAATTTAATCTTGACAGTTTATATTTCAAAATGCAGCTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAGGTATAAATCATCTTTCATCCTGTCAATTGCTTCTTTCTGTTTTCTGAGCCTTAAAAATAACCTTATGTTGGATAACTGGCAGGTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGG</genome_strand>
        <mrna_strand>GGGGATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAG.................................................................................................ACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAG......................................................................................GTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAATATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAG...................................................................................................................................................................................................GTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTTCCATACG...................................................................................................CTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAANAANAGTANTTGCACTGCTTGGAAGAGCCTCTATAATCATATTCNTACTGGNCATGACAATANTTACCAGTGCAATCAGCTTNN..................................................................................NNGGTGTGGGGANAGCAAATATGATAGAGAANCT-NA-ANNNNNGACTATATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597385" ref_strand="+" ref_description="SGN-U597385 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348153|emb|CAO22863.1| (e_value=2e-37) unnamed; (*ATH) AT2G25737.1 (e_value=1e-29) | Symbol: None | expressed protein, contains Pfam profile: PF01925 domain of unknown function DUF81 | chr2:10984014-10986978 FORWARD | Aliases: None; ">
      <seq>gaaaggatattcaagcatacaaattaaaagtttgtttctgctcttttaattcccctcaggttcttcaaagtggaatatatatagaagtagccaatttattacctcagaggaagctacttctatatatatttcttaattaaggctatttgagttgaactttttatgatggctaatgaagagataaaaaagagaatgaaggcgtttttcgtatcagcagtatggatactatgctggggattattcataataagcgaagctgggattaatgcagaaaggcttactctgaaggataaattagagccagctgctacttataacattagttatgtagagaataatgagatgagaccacaaacctttgcagtaaggcttgtgcattttctgtggagtggaaagtcctcttatgagcacgtttggccggagatggagtttggatggagagtaattgttggatccattgtgggattctttggtgctgctttgggaagcgttggaggggttggcggcggtggaatttttgttccaatgctaactcttattattggctttgatccaaaatcatctacagctatatccaagtgcatgataatgggagcagctggatcaacagtgtactacaacatgaggctgaggcacccaactctagatatgcctataattgactatgatttggctttgctcttacaacctatgctcatgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="90774" stop="89202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90474" g_stop="90055" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90054" i_stop="89869" i_length="186">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89868" g_stop="89709" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="580" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89708" i_stop="89625" i_length="84">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89624" g_stop="89502" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="703" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U597385" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U597385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90474" e_stop="90055"/>
          <exon e_start="89868" e_stop="89709"/>
          <exon e_start="89624" e_stop="89502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCGGTAAGATTATAGAGAGCATATTTTGTTTACTCAATATCAACATGAAAATATATATGACTTGTTTTAGATTACTAGTTTCAAAAATCTTTTTTTTATTTCTCAAATTCCGTAACCTGACAAACAACATGATCACATAAAAAGTAGTAATGAAATGTAAATAATGTTTTTTCCTTTGGGAGCTTGCAGGAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGTGTAAGTATTTATGTACCATATACTAACATGTAGTTAGTATGTATATTTGTGAAACAGTACTAAACTATATTGATTTTGTTAAAGGCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</genome_strand>
        <mrna_strand>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCG..........................................................................................................................................................................................GAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGT....................................................................................GCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602892" ref_strand="+" ref_description="SGN-U602892 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cacataacaaacacattaccgggcacacatccccaataaattcgcatttaacaagtcacattagaactcagcaagtaatttaccaaacaattccaaaagaagatacaaaattcaaaacatgggctgatgcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="+" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="94360" stop="95091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94660" g_stop="94791" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="+" ref_id="SGN-U602892" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>132</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94660" e_stop="94791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATAACAAACACATTACCGCGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</genome_strand>
        <mrna_strand>CACATAACAAACACATTACCGGGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582681" ref_strand="+" ref_description="SGN-U582681 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tgcaggacagtccccaattggcgtccacgcagacttggtggcggacttggaacaacaagagttggaaatgaagatgctactagagaggcggttcagcctggaagggcagcatctcgctctgaggagccaagagcacgagatgacagggatagggatcgggagaagtcccgtgaaagggtgcgagataaggacagagagaaatctcgtgagcgttctcatgacaggccaagggaacgtgaaagagatgacaaacatcatagggaacgcgagagaaccagagaaagagaaaaagatcgtggtcgtgaccgtgatcgagaccgcgaacgtgatagagaatatgattatgagcatgttgattcaaaacacgagcgagaccgacacggtgacaaagagaggaattatgatcctgcagaacctgaagatgatcatggacattatgactattatgatcaccaccaaggtcgaggagattatgagaatccagatgcacaaggtggggatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcttatgaccacggggcatctgagacaaaagaaagggatcgggattacaagcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="96736" stop="94757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96437" g_stop="96355" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96354" i_stop="95911" i_length="444">
            <donor d_prob="0.937" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95910" g_stop="95842" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="152" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95841" i_stop="95658" i_length="184">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95657" g_stop="95485" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="325" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95484" i_stop="95350" i_length="135">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95349" g_stop="95057" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="618" r_length="293" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U582681" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96437" e_stop="96355"/>
          <exon e_start="95910" e_stop="95842"/>
          <exon e_start="95657" e_stop="95485"/>
          <exon e_start="95349" e_stop="95057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</genome_strand>
        <mrna_strand>TGCAGGACAGTCCCCAATTGGCGTCCACGCAGACTTGGTGGCGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC.......................................................................................................................................GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574992" ref_strand="+" ref_description="SGN-U574992 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157348154|emb|CAO22864.1| (e_value=1e-67) unnamed; (*ATH) AT3G50670.1 (e_value=1e-69) | Symbol: None | U1 small nuclear ribonucleoprotein 70 (U1-70k) | chr3:18837281-18840568 REVERSE | Aliases: T3A5.50; (*SWP) sp|Q42404|RU17_ARATH (e_value=1e-68) U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1; ">
      <seq>tccaatcgtccgattaacgtaactccacttcttggggcggcgattcccatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagttgtttgagccccgaccacctttggagtacaaaccaccccctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagatacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgctaccggggatccatacaagacactatttgttgcaagacttaattatgagacaacagaaagcagagtcaaacgcgaatttgaggcttatggtccaatcaagcgggttcgcttggttatggacaagacaaacaataaacccaggggttatgctttcattgagtatgtgccatacacgggatatgaaagctgcgtataaacaagctgatggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="100782" stop="96177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100482" g_stop="100312" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100311" i_stop="99536" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99535" g_stop="99421" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="286" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99420" i_stop="99335" i_length="86">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99334" g_stop="99255" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="366" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99254" i_stop="98536" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98535" g_stop="98460" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="442" r_length="76" r_score="0.934"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98459" i_stop="98381" i_length="79">
            <donor d_prob="0.606" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98380" g_stop="98316" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="507" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98315" i_stop="98202" i_length="114">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98201" g_stop="98139" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="570" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98138" i_stop="96659" i_length="1480">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96658" g_stop="96577" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="653" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="96576" i_stop="96503" i_length="74">
            <donor d_prob="0.719" d_score="0.96"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="96502" g_stop="96477" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="679" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U574992" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100482" e_stop="100312"/>
          <exon e_start="99535" e_stop="99421"/>
          <exon e_start="99334" e_stop="99255"/>
          <exon e_start="98535" e_stop="98460"/>
          <exon e_start="98380" e_stop="98316"/>
          <exon e_start="98201" e_stop="98139"/>
          <exon e_start="96658" e_stop="96577"/>
          <exon e_start="96502" e_stop="96477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCCTTTGGTACTGCTGCCAGATGGAAAGAGGAGCTAGGATCCACCAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGTTGCATCTCTTCAGGCTGTAGTTTAAGAAAAGGGATTTTTTTTTTAAACTGCTAGCCATTTTTCCCTGGTGTTTGGAGGTGCATAATGCTTTTCGAAAAATGGGTGATTTTTTTGTGAAGTTAATAGTTTTCTTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTG-CATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAG</genome_strand>
        <mrna_strand>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGGGGCGGCGATTCCCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT...............................................................................ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT..................................................................................................................AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCCATACACGGGATATGAAAG..........................................................................CTGCGTATAAACAAGCTGATGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600046" ref_strand="+" ref_description="SGN-U600046 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tacatctttcaggagcattgaagatttgttgagacgagcagttaacgggagaggttgaatttctgggctgccggaaatttcaccgttgttgaaatatgcaatcacctcctagtactgcttcgtccgacaaagatgacactacttcctcctctccttctaattcctccccgtctcccccaccaccagctccgcctacctccccacccccagaatctcctccacctgtaaattctccgccgccgtcaaaggaatcttctcctccgtcatcaccaccaccctcagcttctgaatcaccaccacctccgtcagattccacttccacatcacccaatgctcctgaggcgtctcctcctacctcatccaaatttaatcctccaccaccagtttcctcaggatcaccttcattatctgctggaaaattttctcctcctccaccttcagaaaaatcagcaccttttgaaaaaccagacggtgcacaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="105304" stop="104230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105117" g_stop="105106" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105105" i_stop="105000" i_length="106">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104999" g_stop="104530" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="482" r_length="470" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U600046" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105117" e_stop="105106"/>
          <exon e_start="104999" e_stop="104530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATCTTTCAGGTAAATTTCTTCTCTTTCATGTCCAAATTGAATCATTTTTATTACTATATGTTGTGTAGGATCTGTAAAGATAACATTTTTTTTTTCGTTTTTCATGGAAATATAGGAGCATTGAAGATTTGTTGAGACGAGCAGCTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGAGACTACTTCCTCTTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCACCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTACCACGTCACTCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTATCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</genome_strand>
        <mrna_strand>TACATCTTTCAG..........................................................................................................GAGCATTGAAGATTTGTTGAGACGAGCAGTTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGACACTACTTCCTCCTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCGCCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTTCCACATCACCCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTTTCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598849" ref_strand="+" ref_description="SGN-U598849 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>agttccaaactgtaagtattatcgtcaaaagagaacctgactatacaattccaacagtttgcacttgtttagaaccaaaactgaaaactagcagcaagaaagtaaaatgactggaggacaaaaacaaatcatactactagcccaaatgaaacaatcatcaagggcactacttcatattctccagatccttgtaacataacgaggcagcttatgtaggctgagaacctctcatcagtattcgtcccagactccacactgttctgctcccttgggttattctccagcattgtgtaccataacaaggctgtttatgtagggtaagaacctcttatcagtatccactcgtcccggactctgcagtgtctcaaccttctggtccctaaggtgataaaagtatattgttgtgtccgtgtggatcaccacagtatcactgacagtacaaggtagtacctcacaacacttctcattgggtattccaagcacttgagtacgaggcttcttgctaccaagatttacactgacactgcgcttcaggcccatgtctacacctccatagatgtctattatgaaaacacttccacagtcattataagcagtaacatagcaaacctcatctcctatctgcgtcaaggcaccacgttgtccagattgaagaacaggtaaatgtagaactgctggaatctcatttttcacatcgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="+" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="105300" stop="106600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105600" g_stop="106300" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="701" r_length="701" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="+" ref_id="SGN-U598849" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105600" e_stop="106300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCCAAACTGTAAGTATTATCGTCAAAAGAGAACCTGACTATACAATTCCAACAGTTTGCACTTGTTTAGAACCAAAACTGAAAACTAGCAGCAAGAAAGTAAAATGACTGGAGGACAAAAACAAATCATACTACTAGCCCAAATGAAACAATCATCAAGGGCACTACTTCATATTCTCCAGATCCTTGTAACATAACGAGGCAGCTTATGTAGGCTGAGAACCTCTCATCAGTATTCGTCCCAGACTCCACACTGTTCTGCTCCCTTGGGTTATTCTCCAGCATTGTGTACCATAACAAGGCTGTTTATGTAGGGTAAGAACCTCTTATCAGTATCCACTCGTCCCGGACTCTGCAGTGTCTCAACCTTCTGGTCCCTAAGGTGATAAAAGTATATTGTTGTGTCCGTGTGGATCACCACAGTATCACTGACAGTACAAGGTAGTACCTCACAACACTTCTCATTGGGTATTCCAAGCACTTGAGTACGAGGCTTCTTGCTACCAAGATTTACACTGACACTGCGCTTCAGGCCCATGTCTACACCTCCATAGATGTCTATTATGAAAACACTTCCACAGTCATTATAAGCAGTAACATAGCAAACCTCATCTCCTATCTGCGTCAAGGCACCACGTTGTCCAGATTGAAGAACAGGTAAATGTAGAACTGCTGGAATCTCATTTTTCACATCGAATG</genome_strand>
        <mrna_strand>AGTTCCAAACTGTAAGTATTATCGTCAAAAGAGAACCTGACTATACAATTCCAACAGTTTGCACTTGTTTAGAACCAAAACTGAAAACTAGCAGCAAGAAAGTAAAATGACTGGAGGACAAAAACAAATCATACTACTAGCCCAAATGAAACAATCATCAAGGGCACTACTTCATATTCTCCAGATCCTTGTAACATAACGAGGCAGCTTATGTAGGCTGAGAACCTCTCATCAGTATTCGTCCCAGACTCCACACTGTTCTGCTCCCTTGGGTTATTCTCCAGCATTGTGTACCATAACAAGGCTGTTTATGTAGGGTAAGAACCTCTTATCAGTATCCACTCGTCCCGGACTCTGCAGTGTCTCAACCTTCTGGTCCCTAAGGTGATAAAAGTATATTGTTGTGTCCGTGTGGATCACCACAGTATCACTGACAGTACAAGGTAGTACCTCACAACACTTCTCATTGGGTATTCCAAGCACTTGAGTACGAGGCTTCTTGCTACCAAGATTTACACTGACACTGCGCTTCAGGCCCATGTCTACACCTCCATAGATGTCTATTATGAAAACACTTCCACAGTCATTATAAGCAGTAACATAGCAAACCTCATCTCCTATCTGCGTCAAGGCACCACGTTGTCCAGATTGAAGAACAGGTAAATGTAGAACTGCTGGAATCTCATTTTTCACATCGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565261" ref_strand="+" ref_description="SGN-U565261 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157348156|emb|CAO22866.1| (e_value=4e-39) unnamed; ">
      <seq>tcgagggtcgttagggttttccggcgattctttgccattctttcttggttttccggcgactttactcaccagaattttagcgcattgcacttttacagtgaaatttcttgaaacccaagttatcatcaagggctctgctgatagaaaaatggcatgttctgggattgacatgctgaatgatgaatctttggaggaggacatgtattctgactcctctgagttttacgttgctgttaaacctcagggtggtgggattgactcgttagcagagtttgacttgagaactgctgcttataaggtggaggaagggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcagcgggttgctcctttgtcaagggaaggacagctattatgtttgcaatcctgcaaccaaagactggaaaaagcttcctcctcctcaatattaccacggatctgatcctgctgttgctcttgcatttgatcctcagttcaatattgaatcattttatcgtgtggtcgctgcagtccctgttcttgataatccagttgtatgctttgagatttactgttctgaatcagattcatggaggtgctctccttcagactgtctagagctggaaaatacaagacttgcaggtggaggatattatatgaagggggtggcttactggaggaatacatcatcgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="108762" stop="106010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108469" g_stop="108376" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108375" i_stop="108035" i_length="341">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108034" g_stop="107984" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="144" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107983" i_stop="107893" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107892" g_stop="107775" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="262" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107774" i_stop="107025" i_length="750">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107024" g_stop="106310" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="977" r_length="715" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U565261" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>978</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108469" e_stop="108376"/>
          <exon e_start="108034" e_stop="107984"/>
          <exon e_start="107892" e_stop="107775"/>
          <exon e_start="107024" e_stop="106310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGTCGTCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTTGTGAGTTCTTCTTCTTCTTAATTCTTCTGTTGCTTACCGGTACTGATCATCACATGCTGTTGTTTATTTATTTAAAAAAAAAATAAGAAAAAATACTGAATTTCTCCGTTTTACAATTGCTGATCAATTTTGTCATGAAAAGATAGGATCATTTTCGTTTTTCTTTTGATCCAATTTTTGGTAGTGTTGTTGTTTCCTTTACATCTTCGAATGTATCGTTTTATGTTCTTGCTTTCTTGAGGAAATAAATGTAGCTATATTTAGTGCTCTATTCAATCTGGGGTTTTCTTGTTTCTTCTTTTTTTCGTTACTAATATTTTTCGTGATTTTCTCATTTACAGTACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAGGTGATACGGAGATGAATTTCTTGATTTTCTCATTTTCATATTATTATTTTTGTTAAGTAATAGACGCTGTAATTTTTAAATGTCTATGCAGAAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCGGTATAGTTTTCTTCCCTTTTATTTCGCTTTCTTGTTTCTTGTTTCAATTGTTCAACAGTTCTTTTTTTTTTATCATCGTCTCTTCTATCCAACTTTCTAATGTTACTTTTTACTTGCTTTGGGATGTTAAGGTCTTGAAATCTCAATAGCAGAACTTGAAGTTTCTTGTTGAACGTTAATGTCCTTTTTTTGTGTCTTAAATGACTTATACTGAACATGACTCTATACTTTGCGTTTTCATGTTTTTTATTTCTAAGTGGTGGTTTCTAAGATGTCCATTTCGAAATTGGCAGATGGCAGATGTATTAAAGTAGTGTAAGTTAGTCCTCATAAATGTCCTTGGATCTCAGTTCTGCCCTATTCCGGTTTGCCTAAAGTTACAATTGTAACAATGACCTCAATTCCAAGCTAGTTTGGGCCAAATGTACTAATCCACTATCCTTTTATTTTCACAATGCCATGGTGTCATGGACAATCTCTGCTTCCCTGTTTTGCTAGGAAGCTACTTCATAAGATCTTGCTTTCTAGTCCTGATTTTTCTATTGTTCCTTTTCCCATTTTTCTTACATTAATGAATATATTTACTTTTTAAATGAGTCTTTCTGAGTGAACAACATGCCTAGCCTAAAAAGAGGAGTGGATACAAATATAGATCATCCTAACTAGTATGATATTGCAGCATAGTTAGTATATCGCTCTTGCTAATGATTACTGTACTACTTTTAACAAGTCTTTCGGTTTGGATTGCAGTTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</genome_strand>
        <mrna_strand>TCGAG-GGTCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT.....................................................................................................................................................................................................................................................................................................................................................TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG...........................................................................................AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589792" ref_strand="+" ref_description="SGN-U589792 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|9858770|gb|AAG01117.1|AF273333_2 (e_value=6e-98) BAC19.2; ">
      <seq>gccaaaatcaaatgcttatcatggatcagatccagcaattgtgctcttatttgaaccatcattgctcaactttgtagcagagtacaaaattatatgtgcttttccatcgacagattttgacaaggcaactgaatttgatatatattactcaagagagggttgttggaaaattgctgaggagatgtgctttggaagtagaacaatatttccaaaatcagggatccatgtgaatggcgttgtttactggatgacaagtaagaatattcttgcttttgatctaacaaagggtaggacacagctccttgaaagctatggcactcgtgggttcttggggacttttagtggaaagctctgtaaggttgatgtcagtggtgatataatcagcttaaacgttttggctaatacccactcaaatacaatgcaaataggtagccaaatcaaaatgtggtcagagaaagagattgttgttcttgacagtgaaattgttggggatggtgcagcaagggaccacacagttttacatgttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="113960" stop="112833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113661" g_stop="113133" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U589792" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113661" e_stop="113133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGAACCACACAGTTTTACATGTTGAC</genome_strand>
        <mrna_strand>GCCAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGGACCACACAGTTTTACATGTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568633" ref_strand="+" ref_description="SGN-U568633 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|9858771|gb|AAG01118.1|AF273333_3 (e_value=3e-128) BAC19.3; (*ATH) AT4G36650.1 (e_value=4e-82) | Symbol: None | transcription factor IIB (TFIIB) family protein, contains Pfam domain, PF00382: Transcription factor TFIIB repeat | chr4:17283288-17285532 REVERSE | Aliases: AP22.23, AP22_23; (*SWP) sp|P62915|TF2B_MOUSE (e_value=2e-16) Transcription initiation factor IIB OS=Mus musculus GN=Gtf2b; ">
      <seq>ctgtatgcttattttttgcaactgtgtggaaatatcagttgcggccaatttacctcagaaggaaatcgggaagtacataaagattcttggagaagcgttacaactcagtcaacctatcaatagtaattctatatcagtccatatgccaaggttttgtacactccttcagctgaataaatctgctcaggagctggcgactcacattggtgaagtaatcatcaataaatgcttttgcactagaaggaatccaattagcatctctgctgctgctatatatttggcatgtcaactagaggacaagcggaagacccaggctgaaatatgtaaggtgactggactaactgaagttactcttcgtaaggtgtacaaggagcttttggagaactgggatgatctcctaccatcaagttataaaccagttgttccaccagagaaggcttttccttcagctaccattgctacaggccgttcatcaacaccgagagttgatatagttgagggaacttcatctgagagggacaagccagttaaaccagtcgactcattagatatatctcctcagatcagaggcaaggaggactccgacagcaaagataatattaatacaactcaattatcttggccaccaccattttggaagcctcaagctcctgctgaaggtggtgttaaatcagctacagataagagtcagaatgctactgaagaaatggagattgatttataatataaatctcaccttttcacgaatagcaaaaactgcttctagttctttgatgtcagccagttctgttatcacctgtgtcaactgcaacttcaacttcagtgttctgaatctccagcctgctgtatcacctggctcttttgcaatgttcaagcgctactaccacaaaaggttgcatataataatcatgtagatagaggattcattaagtaaagttagaatgaggagccatatgtggctggataataagcaattactttggttagaagatggggggcctataagagggagaaatagtttattcaaaaaggcgtcgcataaatttcagttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="118430" stop="116438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118130" g_stop="118103" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118102" i_stop="118017" i_length="86">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="118016" g_stop="117858" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="187" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117857" i_stop="117605" i_length="253">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117604" g_stop="116738" g_length="867"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="1054" r_length="867" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U568633" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1054</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118130" e_stop="118103"/>
          <exon e_start="118016" e_stop="117858"/>
          <exon e_start="117604" e_stop="116738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGATGCTTATTTTTTGCAACTGAGTGGTAGTCTGAGATGCATTTCATAAAAAAACTTCCATGAACTTTCTGATTTTTCTGTGCTTTTCTAATTTGGATTAATTGATAACTAGGAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAGGTACCTAACTGGTTCATTCAGAAGTTAGTAATCAGTTAACTTAGATAATTGTATATACTATTGCCATTAACAAAAAATCAATAGCCGATAAAAACTCTATTTCCCAATCAATTTGTTTGAGACTGCGAATAAGTCATGTCATGTTGGTCCTATGTTTTTACTCAATTTCATCAAGAAGTTATTGTTTAGTTTACTTACGTTCCTCTGTATTTACTAAATCTTTTGACTGTATGTTGCACAACCATTGCATCAGGAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATCAACACCGAGAGTTGATATAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCAGTTAAACCAGTCGACTCATTAGATATATCTCCTCAGATCAGAGGCAAGGAGGACTCCGACAGCAAAGATAATATTAATACAACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTCAAGCTCCTGCTGAAGGTGGTGTTAAATCAGCTACAGATAAGAGTCAGAATGCTACTGAAGAAATGGAGATTGATTTATAATATAAATCTCACCTTTTCACGAATAGCAAAAACTGCTTCTAGTTCTTTGATGTCAGCCAGTTCTGTTATCACCTGTGTCAACTGCAACTTCAGCTTCAGTGTTCTGAATCTCCAGCCTGCTGTATCACCTGGCTCTTTTGCAATGTTCAAGCGCTACTACCACAAAAGGTTGCATATAATAATCATGTAGATAGAGGATTCATTAAGTAAAGTTAGAATGAGGAGCCATATGTGGCTGGATAATAAGCAATTACTTTGGTTAGAAGATGGGGGGCCTATAAGAGGGAGAAATAGTTTATTCAAAAAGGCCTCGCATAAATTTCAGTTAGT</genome_strand>
        <mrna_strand>CTGTATGCTTATTTTTTGCAACTGTGTG......................................................................................GAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAG.............................................................................................................................................................................................................................................................GAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAAGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATCAACACCGAGAGTTGATATAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCAGTTAAACCAGTCGACTCATTAGATATATCTCCTCAGATCAGAGGCAAGGAGGACTCCGACAGCAAAGATAATATTAATACAACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTCAAGCTCCTGCTGAAGGTGGTGTTAAATCAGCTACAGATAAGAGTCAGAATGCTACTGAAGAAATGGAGATTGATTTATAATATAAATCTCACCTTTTCACGAATAGCAAAAACTGCTTCTAGTTCTTTGATGTCAGCCAGTTCTGTTATCACCTGTGTCAACTGCAACTTCAACTTCAGTGTTCTGAATCTCCAGCCTGCTGTATCACCTGGCTCTTTTGCAATGTTCAAGCGCTACTACCACAAAAGGTTGCATATAATAATCATGTAGATAGAGGATTCATTAAGTAAAGTTAGAATGAGGAGCCATATGTGGCTGGATAATAAGCAATTACTTTGGTTAGAAGATGGGGGGCCTATAAGAGGGAGAAATAGTTTATTCAAAAAGGCGTCGCATAAATTTCAGTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567161" ref_strand="+" ref_description="SGN-U567161 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|9858771|gb|AAG01118.1|AF273333_3 (e_value=1e-97) BAC19.3; (*ATH) AT4G36650.2 (e_value=6e-79) |; ">
      <seq>cctttttcactaattgctatttaaatacttgttgtggttttttttacagcttttgaaacctgcaattccccacgcctagctagttgaaatcagaaaaatgcggtgtccgtactgctcggcggagcaagggcggtgtaccagcagcaccagtggcagaccgataaccgagtgcacatcctgcggccgggtagtggaggagcgattaacccaatcccaccatctttttcatacccgtgcccaagattctcctctgtgcctggctacttctgatctccccactcttcccatctccgccactaacgacgatgaagacccatttgaacccactggtttcatcaccactttctctacttggtctctcgaaccctacccagtatttgcccaatcctccatttcattcgccggtcaccttgcagagctcgagcgggtcctcgaaatgacgtcaacttcctccagttcgtcctcttcttctgtcgtggtggaaaatctccgggcttatttgcagattattgatgtggcttctattctgcgactggattctgatatttcggaccacgcgtttcagctcttcagggattgttcttcagcaacttgcttaaggaatcggagtgttgaagcgcttgctactgctgctcttgtgcacgctatcagggaagcccaagagccgagaactctccaggtcaactgaacatttggcttttttcgcctcttccactggatgcttattttttgcaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="120482" stop="117807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120181" g_stop="119563" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="679" r_length="619" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119562" i_stop="118166" i_length="1397">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.670" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="118165" g_stop="118107" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="680" r_stop="738" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U567161" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120181" e_stop="119563"/>
          <exon e_start="118165" e_stop="118107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTCCCCACGCCTAGCTAGTTGAAATCAGAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAGGTATGTTAAATTGGTAAATGGATGCCATAAATACTATGCCAAAAATCTCAATAGCAATAACATATTAGCTAATATTTCAATTCAAAAACTCAAAATAGATAGTACATGTTAAAAGTCTAGAACTTGAATGAGAAAAAAAAAGAATATAAGTCAAAACAGAGGTAGAAGTGACTCTGAAATCTGAGGAAGAACAAGGAAAAGAACTGAGGAAGAAGAAGAAAAGAAGAAATATGTATTGATTGGACTTTGGAGTTGCCAGAGAAGTCTGGCTGGCCGTCGGAGGAGTGTAGTCGAAAACCCTAAATGTACCTTTTAGCTTTTAAAATCCTAAATTTGTCGCCTTTTTTAACGAAAATACAAAATGCGACGCCTTTCTCGCCTCTCGCCTTTGTCGTAATGGCGTCGCCTGTCGAAGATGGCCTCGCCACAAAGCTAAAAAGCAATGAAGGGTCGCCTCGCCTCTCGCCATTGGCGACGAGGCAATCGCCTTTCACAACACTGGTAATTGCAGCTATGTAACTTCGTTTTTCTCAGTGCACCAACTGATTCAGCTGAACCTTTGTGATTGTAGTTTGTTTCGTATTGCTATTTCCTTTCTTGTTCTCTTGTTCAAGCTTATTTCCATCCTAGGGTTTATTCTAATGTTGATAACCTTTTGCCTTCTCCAAACCTCTCTTTTTCACTTACTACTTTTCCTCTTTCTTATCTTAAGTGGAAGATACCCTATATGTAGAAAATCATGGAAGGGAAAAAACAAAGAACAAAGAGGGAAATAGAAGAGAAAAGACAGGAAACTTTTGGTGGGCTGTAAGGGAACTTCTTCCTCCTCACCCCCCCCCCCTCACCCAGTCCCCCACCCAATGTTCTTTTCCTGTGTTTTTCTATGAGGGAACTCTTGTACTTCTTTCCTCTTCCCTTTCCTTGTTTCCTTTATTAGTGTGCCGAACCTGGAGTTGCAGTATAGTTGCATCGATGATATGCCCTGGGATTGACCATCAACAATAAATTTGCTGCTAACTTTAAAGTGGTTTAGAGATACTACCCATTTGATTGCACTTAAACCCAAGTAAATGGTCAATAACCTTAAGCTCACAATTTGAATTTTGTTTCTTGGTCTATTTTAAACATATACTCCGTGAAATAGAACAGTGCTTCAAAATAGCAATGACAATGTGGAAAGCAACATTCATGTATTGAATGTGAAGTACTGCCATTGTGTTACTATTGTCAATTGTCATTCTTGTAGTAAGTGAGCTAGAGAGAGAGAGAGAGAGGGGTCTCAATATTGCTAACTTGTCATTTTTTATATTATGCTAGTGTGTCTTTGTCAATGGTTGTTGATTGTAATTTGTATACCATGTTTAATTTGAAATAATCAGACATTCTTCCAATTGTAGGTCAACTGAACATTTGGCTTTTTTCGCCTCTTCCACTGGATGCTTATTTTTTGCAACTG</genome_strand>
        <mrna_strand>TGCAATTCCCCACGCCTAGCTAGTTGAAATCAGAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAACTGAACATTTGGCTTTTTTCGCCTCTTCCACTGGATGCTTATTTTTTGCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586799" ref_strand="+" ref_description="SGN-U586799 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|156070789|gb|ABU45201.1| (e_value=1e-17) unknown; (*ATH) AT4G36650.2 (e_value=1e-13) |; ">
      <seq>agggcggcgtaccagcagcaccaggggcataccgatcaccgagtgcacatcctgcggccgggtagtggaggagcgattaacccaatcccaccatctttttcatacccgagcccaagattcttctctgagcctggctacttctgatctcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="-" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="120415" stop="119665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120115" g_stop="119965" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="-" ref_id="SGN-U586799" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>151</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120115" e_stop="119965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCC</genome_strand>
        <mrna_strand>AGGGCGGCGTACCAGCAGCACCAGGGGCATACCGATCACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGAGCCCAAGATTCTTCTCTGAGCCTGGCTACTTCTGATCTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567388" ref_strand="+" ref_description="SGN-U567388 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|9858772|gb|AAG01119.1|AF273333_4 (e_value=2e-60) BAC19.4; (*ATH) AT5G65650.1 (e_value=6e-45) | Symbol: None | expressed protein | chr5:26256728-26258741 FORWARD | Aliases: K21L13.17, K21L13_17; ">
      <seq>tgaaaatagattatccaggagaatcccagaatagagatgcaatcaaattcaaataaaccaaacgtacatataaaagggaaaagggaaaaggcaaaaaggaattttatttgttcaaaaaagagaaagaaggaatgagggatgacgatcttcccatatcaacgccaacagcaccttcatcgtcgttcacgacttcgaagaaggaaacttcctattttgccattttcggtagaggtcgttataagttttgggcctttgccgctatctcattgttagctttgtggtctatgttcaccggaactgttaccctccgttggtccgccggtaacctcaacgccatatccgatgacatcgacattcccctccccgaagatcttgacgttctcgaaatggaagaaagggagaagttagtgaagcatatgtgggatgtatacacaaacagccgtgggatcaaattgttaaagttttggcaggaagcatttgaggctgcctatgaggagttagccagtgacgtccctggagtcccagaggatgccctttctgagattgctaagatgtctgtacgctacattcctattgaatcaccacctcttcattcgtcgggaattcgtgaattaagtctaaggcaaatgaagagggagcaaacaactgcaacagggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0023N04-TqhHf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0023N04.3" temp_strand="+" temp_description="C02HBa0023N04.3  AC215358.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0023N04 sequenced_by:kribb upload_account_name:korea">
        <position start="121164" stop="126058"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121464" g_stop="121846" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121847" i_stop="122009" i_length="163">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122010" g_stop="122225" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="599" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122226" i_stop="125699" i_length="3474">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="125700" g_stop="125758" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="658" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0023N04.3" gen_strand="+" ref_id="SGN-U567388" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0023N04.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121464" e_stop="121846"/>
          <exon e_start="122010" e_stop="122225"/>
          <exon e_start="125700" e_stop="125758"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTCGTCCGTACATTTCCCATTTTCAAACCTTTTGTTTTTTTAATTTATGTCGTCCTATTGGAAATGCTGGGGCTAGTTTGGAATTGAGTGATTGGATTACGTACTTATTAATAAATTGATATTTTTCATTGGTTGATTTTCGGAAATTGTTATGAATTTTTGGCAGGAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCGGTTAGCTCTCTCTTTCATTTTTGAATCCAATTCTCATGGCGATTTGGGTGTTTTTTAGACAAGCAATAAGCCTCGTAGCGCTCTTGTGATCTTTACCACTGTTAATTGATTGTTACAATGTGAATTGTCATTTTAACGGTGTGCTGATAGAAGCTTTAACAACAATAGCAACCATACTTCAAAGTCTCTGTTTGATTGGGGTTTACTATATAGATTTTTCATTTTTCGTTTTGACTCGATTTGTTCATGTTTCATTTCAATACTCTTATGATTTCTTTGTAAGACAAATTTGCAGCTCTCTAACCCTATTGTATTTATCTTACTTTTATACAAATCTCTAAATGTATATAGAAGATGTCCAGCATACTCCAGACTGTAAGTGTATCAACATTACCAAGTCTTAATCTCGACTAGTTGGCATTGCTCAAATGATCTTTTGCTTTCATTGTGTTTTGCTCTTCACCAAGTCTAGCTAACTTTCTTCCATGTGATTTTAGGATTACCTCATTTCCTTTAAAATAACTTCAATCATTATTTGGTAATGCTGACAGATCAGTGCACTTAAAGATCTACCTAAACTCTTTTATGAATCTTTTCTTTCAAGTGTCCTATTTTAATTCTTAGACTTACTTTTTCATGTATTGCACCATTCTCTTAGATTACTAGGCTAGATCTCTGAATTGTGTGCATTTAGACATCACACCTGTTGAATCTCAACTTCATTTGTGCTGGCAGAGTTTATGTAAAAAAAAATAACTAGAATTTGCTTGTATGTTCCCCTTGTCATCTTTAGTTTCGTTATTTTGGCGATACTATATACTTAGAATGTTGCAAATGCTTCACTTGTCTATCATCACTCATAACAATGAATTTTAAGTAGTTTTTCCTTGAACTTTAAGGTATATGGTAAGTCCAAGTCAAAGGAAACTGAAAAATGCAACATAATTTGGTCTATATTCTTTGCAATGCAACTTTTAGGTAGTTGCCATTTCTTAAACTTTTCACAATCCACTAACTTAATCTGATGGTTGTGTGAGTTTATTATATTTAAGAAGATATCATAATGAACTGAAGCACATTGGGAAGTATACTTTTCTGCTCTTTGGCTCACAACTATCATAATGTCGACTTGGTCAGAAATAATACACTGAGTAGACTGTTCTATTTGGTACTTCTTAGAAAAAACATAATTTGTTTCAGATTAGGTAAGGTAGTATTTGACCTCTACACATTAAATATGAATTTAATACTGAAGTTAGCCATTTTGACTAAAGCATCTCCCTGATTTATTTAATTCTAATCTCCTTGGATGCTAAATCAAATTTACCCAATAAACTGGTATCTGCTGCAATTTCGTAAGTTGACTTTCCTGAGACAGTCGCTATTTCATATATATATATATATATACATGTACACGTAGAGATAGGGGTGGGCATTCGGTATTTCGGTTCGGTTCGGGTTTTTTTTCGGTTTTTAGTTTTTGTAAATTGCGTACCGAATACCGAACCGAAATATTTCGGTTCGGTTCGGTTTTTTAATGGGCCTGTTTAGTGGGCTTTTTAAAATTTTAAACTTAACAATTTTTTCAATTTTTTGTTTGATTTTTCAACTTAATGGACTTTGATATTTCAACTTAGGGTTTCTTATTTTTTTTAAAAAGATTATTTAATATTAATAATTATTAAATATAATATAATTTATAAATTATAATATAATATTTCGGTTTAAACCGAAATACCGAATTCCAAAGTAACATGTACCGAAAACCGAATCGAAATATCAAAAATACAAAAAATTAAACCGAATACCGAACCGAAAACCGAAATACCGAAACCGAAATTCTGAAAAATTTCGATTCGGTTCGGTGTTTTGATTTTCCGGTTTTTATGCCCACCCCTACGTAGAGAGAGAAGTTCCAACTATCCCTAACTGACGCTGGTAGGGAAATTTGGAAATTCTCTCCCACGTCACGCTAGATTATGATTATGGGCTAAAATTCAACAGCTGATGTCACCAGCCCATAATGGAAGATTTTTCACTATTAGTATTGTTATATTATTATTTCTAGTTTTTAAACTTGCACTACTCTTTTTCTTGTTCATTGTTTGCTTCTGGGAAATGCTTTTCTTTTTGTAATGGTGGTGTCCGAGCAAGCTTATGTGTGTCTTGACTTTTCCACAGGGTACCTGCTACCTCCCACCAACATAGGTACCAGGTTGGCTTAGGCAAATGGGAAGCTGGGATTCATACATGATACCTCATTTTCTAATCCCACTTCGCTGACCATTAGGCAATACCCTTGAGTTCCACTTTGGTGCAATGTTAATGCTTACATTCTATTTGCTTCTTAATTTGAGATTTCATTGATTACATTTTATCATTAATGTGGCGATATTCTACAGCCGCAAGTTTACTAGTTTTATGTTCTGTGTTCCTTATGGTTGCTTCCTTCGACTATTTGAAACCATCTAATTGTGGTTTGTTGTGTGGACCCATTCATAGGGAGAAGTGTTCTCAGTAACTAGATTCATGAGTTGTATTTTTAGATAACTTTGATATGAAAACTTATTTTTCTTTCTTCCTTGGCTAGAATTTACCTGCATGTTGACTGTACTTGGCTATTTTGCTATGTTGAACTTTAGCGATTTGCATATGGAAAAGTTTAAAAAAACAGTCCTCCCGTTCCATCTTGCTTATTGAATCACATGATAGTGTAAATCATCTGTTGTTAACTTGTTATTTTCGATAATATTGGTGATAGGTCTACCATTTCTGTCTTTCACTTTTACCATCAACATGAGATGATCTTCTATAATTCGTTTGCTCCAGTCGAAAATTTCTCCTTGTTTACATTGACAAAATACAACTTCCTCGTTGGAGCTGATTGGACCTGATAATAACACAGTTCTCTTTTCGACTTTGATGTGCGTATTCTTGTGTTATTTCTTTGTTTTCTCTGATGAAGCTTATGAAATTTCTTGTTGCTCCATATAAGAGTTGAAGAAAGTTCTCAGTATTTATATATGTATGTAATAAAGAGTTGAAGGGAAGTTCTCTTTGCCTCTTAGAGGGCAGTTTACATGAAATATGCAGTAACTTCCTATTAAGTACACTGTGATAAAATAGTAGCTTTTCTTTCTGCAACTTAATTGGTCAAGTTGGTTGGCGTGAAACACGATAGCCTAACAATATTGTGCCCAAGGTTGGCAGGTGATGGATAATAAGATGTTCCGTTTTTCCTTTCTATAGGCCAATAACTTTGGCTGGAAAAACAACATTCTTTATGGCTGGATCTCTCTCTTTAGCCTCTAACGTGCGCTGATTGTTGCTGCTATTTTGTGTTGTCTTTTGTTAAAAGTTACAGTCAAAGATAACTTTCTTAATTCCACCCAGTTTGCTCTCCTAGATTCTTGTTATGTTGTGATTGTTCCTAATGTTAATGATGCGTTTTGATCCCATTTTAAACTATTTCAGGGAATTCGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGGGAG</genome_strand>
        <mrna_strand>TGAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTC...................................................................................................................................................................GAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATTCGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>36</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1040" PGL_stop="580"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1040" e_stop="580"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="1040" e_stop="580" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1040" stop="580"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTATGAGTGGAAAGAGACCTTAACCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</gDNA_template>
            <first_frame> V  Y  E  W  K  E  T  L  T  L  T  Y  L  L  I  *  T  E  A  Q  V  E  S  I  M  E  R  D  Y  E  *  T  D  F  Y  L  A  H  V  S  I  T  T  P  G  I  T  R  E  Y  F  L  K  I  A  *  V  S  K  F  S  S  L  L  G  F  G  I  E  N  C  I  C  Y  Y  L  T  I  M  I  F  E  P  S  *  S  C  Q  V  *  S  E  W  L  L  L  Q  L  Y  Y  S  I  L  S  N  W  K  C  R  D  L  L  F  R  I  T  K  A  G  K  S  E  C  *  *  K  L  V  Y  L  H  L  Y  V  K  G  R  K  R  V  N  V  D  G  I  W  F  I  T  A  H  Q  H   </first_frame>
            <second_frame>  S  M  S  G  K  R  P  *  P  *  L  I  Y  *  F  K  Q  R  H  K  L  S  Q  *  W  R  E  T  M  N  R  L  I  S  I  *  H  T  *  A  L  Q  L  Q  A  *  Q  G  S  I  F  *  K  L  L  R  F  L  N  F  H  R  C  *  A  L  A  *  R  I  V  S  A  I  T  S  P  S  *  S  L  N  H  L  N  P  V  K  Y  D  Q  N  G  C  C  Y  S  C  T  T  Q  Y  C  Q  T  G  S  A  E  I  F  C  F  V  L  R  R  Q  E  R  V  N  A  D  E  N  W  C  I  Y  I  F  M  *  R  A  E  R  G  *  M  W  M  E  S  G  S  L  Q  P  I  N  I  </second_frame>
            <third_frame>   L  *  V  E  R  D  L  N  L  D  L  S  T  N  L  N  R  G  T  S  *  V  N  N  G  E  R  L  *  I  D  *  F  L  F  S  T  R  E  H  Y  N  S  R  H  N  K  G  V  F  F  E  N  C  L  G  F  *  I  F  I  A  A  R  L  W  H  R  E  L  Y  L  L  L  P  H  H  H  D  L  *  T  I  L  I  L  S  S  M  I  R  M  V  V  V  T  V  V  L  L  N  T  V  K  L  E  V  Q  R  S  F  V  S  Y  Y  E  G  R  K  E  *  M  L  M  K  T  G  V  F  T  S  L  C  E  G  Q  K  E  G  E  C  G  W  N  L  V  H  Y  S  P  S  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0023N04.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="3996" PGL_stop="2793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3996" e_stop="3924"/>
            <exon e_start="3788" e_stop="3717"/>
            <exon e_start="3423" e_stop="2793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3996" e_stop="3924" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.950">
            <gDNA_intron_boundary i_start="3923" i_stop="3789" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3788" e_stop="3717" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3716" i_stop="3424" i_length="293"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="3423" e_stop="2793" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3996" stop="3924"/>
              <exon start="3788" stop="3717"/>
              <exon start="3423" stop="2793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG : ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG : GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAAGAAGGTCAAAATTCAATATTCTTGTGATTGGATGAGATTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCGACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGTTATGGAATTTCCATTTGATGGTTAGGGAC</gDNA_template>
            <first_frame> N  R  C  P  L  K  K  R  *  E  R  E  R  Q  T  N  G  S  E  E  L  V  V  Q   : D  N  L  G  F  F  L  N  G  T  S  Q  N  I  S  G  H  G  L  *  I  Y  S  N   : G  C  *  H  *  *  K  E  H  *  E  R  *  C  R  G  I  S  D  S  S  S  R  G  K  G  I  L  P  L  L  Y  Y  R  C  V  W  L  Y  G  *  *  K  C  S  Q  K  Y  F  F  *  K  N  D  Y  L  S  *  L  S  P  P  T  T  *  C  P  Y  S  T  P  S  Y  *  V  R  N  P  L  V  S  *  *  R  F  F  C  L  R  V  H  F  T  G  E  V  I  G  R  S  S  P  F  R  F  E  T  I  I  N  F  F  C  P  S  N  M  K  Q  R  S  S  *  C  M  L  F  F  *  V  T  H  I  A  L  *  K  *  K  G  Q  E  *  F  *  C  S  Y  *  R  S  S  V  D  N  C  V  E  H  D  I  N  K  K  V  K  I  Q  Y  S  C  D  W  M  R  F  I  I  L  A  F  P  W  H  L  L  C  S  D  *  L  P  I  I  L  P  I  S  D  L  C  Y  G  I  S  I  *  W  L  G   </first_frame>
            <second_frame>  T  V  A  L  *  R  R  G  E  K  E  S  A  K  Q  M  A  P  K  N  L  S  F  K  :  I  I  L  G  S  S  S  M  A  R  R  K  I  L  A  D  M  G  Y  E  F  T  V  M  :  G  A  D  I  D  E  K  S  I  R  K  D  N  A  E  E  L  V  I  A  L  A  E  A  K  V  Y  Y  L  F  S  I  T  G  V  F  G  Y  M  V  D  K  N  V  L  K  N  I  F  S  R  K  T  I  I  *  V  N  C  L  L  P  P  P  N  A  P  T  P  H  P  H  T  K  *  E  I  H  L  F  P  D  D  V  F  F  V  F  E  F  I  S  L  V  K  *  L  V  E  V  H  H  L  G  L  K  L  *  S  I  F  F  V  Q  V  T  *  N  K  D  L  R  S  V  C  Y  S  S  K  *  H  I  S  P  Y  K  S  K  K  A  R  S  N  F  S  A  V  I  R  G  V  L  L  I  I  V  *  N  M  I  S  I  R  R  S  K  F  N  I  L  V  I  G  *  D  L  L  F  W  H  S  L  G  I  F  C  V  P  T  N  F  Q  S  F  C  P  S  V  I  Y  V  M  E  F  P  F  D  G  *  G  </second_frame>
            <third_frame>   P  L  P  F  E  E  E  V  R  K  R  A  P  N  K  W  L  R  R  T  C  R  S  R :   *  S  W  V  L  P  Q  W  H  V  A  K  Y  *  R  T  W  V  M  N  L  Q  *  W :   V  L  T  L  M  K  R  A  L  G  K  I  M  Q  R  N  *  *  *  L  *  Q  R  Q  R  Y  T  T  S  S  L  L  P  V  C  L  V  I  W  L  I  K  M  F  S  K  I  F  F  L  E  K  R  L  F  K  L  I  V  S  S  H  H  L  M  P  L  L  H  T  L  I  L  S  K  K  S  T  C  F  L  M  T  F  F  L  S  S  S  S  F  H  W  *  S  N  W  *  K  F  T  I  *  V  *  N  Y  N  Q  F  F  L  S  K  *  H  E  T  K  I  F  V  V  Y  V  I  L  L  S  N  T  Y  R  P  I  K  V  K  R  P  G  V  I  L  V  Q  L  L  E  E  F  C  *  *  L  C  R  T  *  Y  Q  *  E  G  Q  N  S  I  F  L  *  L  D  E  I  Y  Y  F  G  I  P  L  A  S  F  V  F  R  L  T  S  N  H  S  A  H  Q  *  F  M  L  W  N  F  H  L  M  V  R  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3980" stop="3924"/>
                    <exon start="3788" stop="3717"/>
                    <exon start="3423" stop="3256"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRGEKESAKQMAPKNLSFKIILGSSSMARRKILADMGYEFTVMGADIDEKSIRKDNAEELVIALAEAKVYYLFSITGVFGYMVDKNVLKNIFSRKTII*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3359" stop="3141"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRQRYTTSSLLPVCLVIWLIKMFSKIFFLEKRLFKLIVSSHHLMPLLHTLILSKKSTCFLMTFFLSSSSFHW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="7754" PGL_stop="6045"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7754" e_stop="7581"/>
            <exon e_start="7326" e_stop="7259"/>
            <exon e_start="7033" e_stop="6857"/>
            <exon e_start="6694" e_stop="6596"/>
            <exon e_start="6502" e_stop="6257"/>
            <exon e_start="6148" e_stop="6045"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.580" e_score="0.983"/>
          <exon-intron don_prob="0.982" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="0.827"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="7754" e_stop="7581" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.580">
            <gDNA_intron_boundary i_start="7580" i_stop="7327" i_length="254"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7326" e_stop="7259" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.857">
            <gDNA_intron_boundary i_start="7258" i_stop="7034" i_length="225"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7033" e_stop="6857" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.977">
            <gDNA_intron_boundary i_start="6856" i_stop="6695" i_length="162"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6694" e_stop="6596" e_length="99"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.789">
            <gDNA_intron_boundary i_start="6595" i_stop="6503" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="0.967">
            <gDNA_exon_boundary e_start="6502" e_stop="6257" e_length="246"/>
          </exon>
          <intron i_serial="5" don_prob="0.960" acc_prob="0.000">
            <gDNA_intron_boundary i_start="6256" i_stop="6149" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="0.827">
            <gDNA_exon_boundary e_start="6148" e_stop="6045" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7754" stop="7581"/>
              <exon start="7326" stop="7259"/>
              <exon start="7033" stop="6857"/>
              <exon start="6694" stop="6596"/>
              <exon start="6502" stop="6257"/>
              <exon start="6148" stop="6045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568417" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAG : GAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAG : GTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGG : CATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAG : AATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGGTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAGATATTATCTACATTTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGATTTTTCGAGGCATTTTGGAAG : ATCAAGTTTGTGTATCCCAATAACAAAGATAGCGTGGAGTTGATGAAGACTTTTTTCGATACTGAGAATCTTCCAAGTGAGTTTGGGGGAAAAGCCACATTGAA</gDNA_template>
            <first_frame> K  T  T  S  V  *  K  I  P  F  S  V  C  S  L  F  V  T  V  Q  V  N  D  H  L  L  C  V  I  S  L  Q  L  Q  V  V  L  Y  T  F  P  T  R  I  N  F  Y  C  V  H  V  E  *  S  R  G  S  Q  :  E  S  C  S  G  E  S  R  L  A  Q  F  R  Q  M  I  L  Q  P  V  V  Q  R :   L  A  S  *  E  R  L  L  D  L  S  L  G  E  T  *  S  S  V  P  M  C  V  *  G  N  T  *  K  L  E  I  G  T  L  T  R  Q  K  K  C  S  K  R  L  S  S  G  D  P  P  I  S  L  K  K  F  V  G :   M  K  W  H  M  K  V  K  L  A  K  F  L  R  V  I  F  K  T  D  L  A  E  P  S  L  *  *  G  L  G  N  R :   I  H  H  L  R  K  V  I  F  V  I  *  S  I  *  W  R  V  L  S  L  T  C  Q  K  A  K  N  K  C  L  G  *  *  T  S  M  D  G  H  *  T  P  T  F  P  L  K  L  Q  E  I  L  S  T  F  C  R  I  I  I  Q  R  G  L  L  *  L  F  F  I  V  H  L  D  F  S  R  H  F  G  R :   S  S  L  C  I  P  I  T  K  I  A  W  S  *  *  R  L  F  S  I  L  R  I  F  Q  V  S  L  G  E  K  P  H  *  </first_frame>
            <second_frame>  R  L  Q  A  C  E  K  F  H  F  P  S  V  P  S  L  *  L  F  K  *  M  I  T  Y  F  A  *  Y  L  Y  N  F  K  W  C  C  I  L  F  P  Q  E  L  I  S  I  V  F  M  *  S  D  R  G  D  H  R :   N  H  V  P  E  K  V  V  S  H  N  S  G  R  *  F  C  S  P  W  C  K   : G  *  R  V  K  R  G  C  W  T  S  L  W  A  K  L  K  V  L  Y  R  C  V  S  E  A  I  L  R  S  S  K  L  E  P  *  Q  G  K  K  N  A  R  R  D  S  Q  V  E  I  H  L  *  A  *  R  N  S  L   : A  *  S  G  T  *  K  *  N  W  Q  S  F  *  G  *  F  S  R  P  T  W  Q  N  R  P  Y  N  E  A  W  E  T   : E  Y  I  I  S  G  R  *  Y  S  S  S  S  L  S  D  G  E  C  Y  P  *  P  A  R  R  P  R  T  N  V  L  V  D  R  L  Q  W  M  V  I  E  H  Q  H  S  H  *  N  C  K  R  Y  Y  L  H  F  A  E  S  L  S  R  E  A  C  Y  S  C  S  L  *  S  T  *  I  F  R  G  I  L  E   : D  Q  V  C  V  S  Q  *  Q  R  *  R  G  V  D  E  D  F  F  R  Y  *  E  S  S  K  *  V  W  G  K  S  H  I  E </second_frame>
            <third_frame>   D  Y  K  R  V  K  N  S  I  F  R  L  F  P  L  C  N  C  S  S  E  *  S  P  T  L  R  D  I  S  T  T  S  S  G  V  V  Y  F  S  H  K  N  *  F  L  L  C  S  C  R  V  I  E  G  I  T   : G  I  M  F  R  R  K  S  S  R  T  I  Q  A  D  D  S  A  A  R  G  A  K  :  V  S  E  L  R  E  A  V  G  P  L  S  G  R  N  L  K  F  C  T  D  V  C  L  R  Q  Y  L  E  A  R  N  W  N  L  D  K  A  K  K  M  L  E  E  T  L  K  W  R  S  T  Y  K  P  E  E  I  R  W  :  H  E  V  A  H  E  S  E  T  G  K  V  S  K  G  N  F  Q  D  R  L  G  R  T  V  L  I  M  R  P  G  K  Q  :  N  T  S  S  P  E  G  N  I  R  H  L  V  Y  L  M  E  S  A  I  L  N  L  P  E  G  Q  E  Q  M  S  W  L  I  D  F  N  G  W  S  L  N  T  N  I  P  I  K  T  A  R  D  I  I  Y  I  L  Q  N  H  Y  P  E  R  L  A  I  V  V  L  Y  S  P  P  R  F  F  E  A  F  W  K  :  I  K  F  V  Y  P  N  N  K  D  S  V  E  L  M  K  T  F  F  D  T  E  N  L  P  S  E  F  G  G  K  A  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7620" stop="7581"/>
                    <exon start="7326" stop="7259"/>
                    <exon start="7033" stop="6857"/>
                    <exon start="6694" stop="6596"/>
                    <exon start="6502" stop="6257"/>
                    <exon start="6148" stop="6047"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLLCSCRVIEGITGIMFRRKSSRTIQADDSAARGAKVSELREAVGPLSGRNLKFCTDVCLRQYLEARNWNLDKAKKMLEETLKWRSTYKPEEIRWHEVAHESETGKVSKGNFQDRLGRTVLIMRPGKQNTSSPEGNIRHLVYLMESAILNLPEGQEQMSWLIDFNGWSLNTNIPIKTARDIIYILQNHYPERLAIVVLYSPPRFFEAFWKIKFVYPNNKDSVELMKTFFDTENLPSEFGGKATL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7721" e_stop="6987"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="7721" e_stop="6987" e_length="735"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7721" stop="6987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596267" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTT</gDNA_template>
            <first_frame> V  C  S  L  F  V  T  V  Q  V  N  D  H  L  L  C  V  I  S  L  Q  L  Q  V  V  L  Y  T  F  P  T  R  I  N  F  Y  C  V  H  V  E  *  S  R  G  S  Q  V  S  L  F  I  S  L  F  C  M  I  S  F  K  S  Q  I  F  L  Q  S  S  *  F  L  S  K  K  S  N  R  F  F  L  K  V  I  L  I  S  F  P  F  A  L  F  T  F  S  *  S  S  L  S  Y  R  N  S  K  F  T  S  G  S  L  S  D  E  A  E  S  H  I  H  V  T  A  S  T  I  F  S  I  N  R  N  H  V  P  E  K  V  V  S  H  N  S  G  R  *  F  C  S  P  W  C  K  G  N  R  Q  S  Y  I  L  T  F  R  F  A  S  S  N  P  P  *  Q  S  I  C  L  N  Y  P  *  K  I  H  L  M  F  N  N  N  *  I  D  H  W  V  N  V  P  F  K  L  N  C  Q  D  N  *  T  E  Q  *  L  V  V  K  T  I  E  Q  G  L  I  F  Y  G  K  P  G  *  R  V  K  R  G  C  W  T  S  L  W  A  K  L </first_frame>
            <second_frame>  S  V  P  S  L  *  L  F  K  *  M  I  T  Y  F  A  *  Y  L  Y  N  F  K  W  C  C  I  L  F  P  Q  E  L  I  S  I  V  F  M  *  S  D  R  G  D  H  R  F  L  S  L  F  L  S  F  V  *  Y  L  S  S  P  K  S  F  C  N  L  P  N  S  F  P  R  K  V  I  V  F  F  L  K  S  F  S  S  L  F  L  L  L  Y  L  L  F  H  N  P  A  Y  L  T  G  I  L  N  L  L  V  V  V  L  V  M  K  Q  S  R  I  Y  M  *  L  L  A  P  F  F  Q  L  T  G  I  M  F  R  R  K  S  S  R  T  I  Q  A  D  D  S  A  A  R  G  A  K  V  T  D  K  V  I  F  L  H  S  D  L  L  H  Q  I  H  H  D  K  V  S  V  S  I  T  P  R  K  S  I  *  C  L  I  I  T  R  L  T  T  G  *  M  F  H  S  N  *  I  V  R  T  I  K  L  S  N  N  W  *  L  K  L  *  N  R  D  *  F  S  M  A  N  Q  V  S  E  L  R  E  A  V  G  P  L  S  G  R  N   </second_frame>
            <third_frame>   L  F  P  L  C  N  C  S  S  E  *  S  P  T  L  R  D  I  S  T  T  S  S  G  V  V  Y  F  S  H  K  N  *  F  L  L  C  S  C  R  V  I  E  G  I  T  G  F  S  L  Y  F  S  L  L  Y  D  I  F  Q  V  P  N  L  S  A  I  F  L  I  P  F  Q  E  K  *  S  F  F  S  *  S  H  S  H  L  F  S  F  C  F  I  Y  F  F  I  I  Q  L  I  L  P  E  F  *  I  Y  *  W  *  S  *  *  *  S  R  V  A  Y  T  C  N  C  *  H  H  F  F  N  *  Q  E  S  C  S  G  E  S  R  L  A  Q  F  R  Q  M  I  L  Q  P  V  V  Q  R  *  Q  T  K  L  Y  S  Y  I  P  I  C  F  I  K  S  T  M  T  K  Y  L  S  Q  L  P  L  E  N  P  F  N  V  *  *  *  L  D  *  P  L  G  K  C  S  I  Q  I  E  L  S  G  Q  L  N  *  A  I  T  G  S  *  N  Y  R  T  G  I  N  F  L  W  Q  T  R  L  A  S  *  E  R  L  L  D  L  S  L  G  E  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7549" stop="7355"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLSSPKSFCNLPNSFPRKVIVFFLKSFSSLFLLLYLLFHNPAYLTGILNLLVVVLVMKQSRIYM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="9036" PGL_stop="8440"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9036" e_stop="8440"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="9036" e_stop="8440" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9036" stop="8440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604233" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</gDNA_template>
            <first_frame> Y  R  R  D  Q  N  E  L  S  R  W  S  V  N  T  Y  *  Y  L  L  T  W  *  M  A  I  I  N  L  T  K  R  C  Y  G  N  S  L  E  Y  V  P  S  S  *  K  Q  R  K  W  M  L  L  Q  K  L  F  Q  *  L  R  W  V  Q  L  Q  V  V  R  R  H  F  L  L  G  M  H  V  M  *  L  P  K  F  N  R  R  L  *  T  N  T  *  G  I  F  V  D  C  G  I  A  C  *  D  V  D  L  L  R  R  R  R  P  S  M  V  Q  Y  F  V  L  S  S  S  S  M  E  T  D  S  G  K  S  E  Q  I  I  D  L  I  H  R  R  F  K  G  I  A  V  V  P  P  N  V  S  V  Y  P  T  M  T  T  R  L  C  K  D  C  R  E  E  K  D  H  L  P  L  R  V  Y  K  *  Y  L  A  F  A  N  C  E  Y  K  I  R  E  A  Y  C </first_frame>
            <second_frame>  T  G  E  I  K  M  N  S  R  D  G  L  *  I  P  I  S  I  C  *  R  G  K  W  R  *  S  I  *  P  R  D  V  T  A  I  H  L  N  M  F  Q  V  H  E  N  R  G  S  G  C  Y  Y  R  N  Y  F  S  S  *  G  G  Y  S  S  K  *  *  G  D  T  S  Y  *  A  C  M  *  C  S  C  R  N  S  T  D  D  Y  K  P  T  P  K  E  S  L  W  I  V  E  L  L  A  E  M  L  T  C  *  G  D  A  G  L  V  W  C  S  I  L  Y  F  P  P  P  L  W  R  R  T  L  A  S  Q  N  R  S  L  I  *  S  I  G  D  S  R  V  *  Q  *  Y  H  Q  M  *  V  F  I  Q  Q  *  L  L  G  C  V  K  T  A  E  R  R  K  I  I  C  R  *  G  C  I  S  D  I  W  H  L  P  I  V  N  I  R  S  V  K  L  I   </second_frame>
            <third_frame>   P  E  R  S  K  *  T  L  E  M  V  C  E  Y  L  L  V  F  A  N  V  V  N  G  D  N  Q  S  N  Q  E  M  L  R  Q  F  T  *  I  C  S  K  F  M  K  T  E  E  V  D  V  I  T  E  I  I  S  V  A  E  V  G  T  A  P  S  S  E  E  T  L  L  I  R  H  A  C  N  V  V  A  E  I  Q  Q  T  I  I  N  Q  H  L  R  N  L  C  G  L  W  N  C  L  L  R  C  *  L  V  K  E  T  Q  A  *  Y  G  A  V  F  C  T  F  L  L  L  Y  G  D  G  L  W  Q  V  R  T  D  H  *  S  N  P  S  E  I  Q  G  Y  S  S  S  T  T  K  C  K  C  L  S  N  N  D  Y  *  V  V  *  R  L  Q  R  G  E  R  S  F  A  V  E  G  V  *  V  I  F  G  I  C  Q  L  *  I  *  D  P  *  S  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8724" stop="8488"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVDLLRRRRPSMVQYFVLSSSSMETDSGKSEQIIDLIHRRFKGIAVVPPNVSVYPTMTTRLCKDCREEKDHLPLRVYK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8920" stop="8717"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICSKFMKTEEVDVITEIISVAEVGTAPSSEETLLIRHACNVVAEIQQTIINQHLRNLCGLWNCLLRC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="11200" PGL_stop="9191"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11200" e_stop="10407"/>
            <exon e_start="10301" e_stop="9191"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.703" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11200" e_stop="10407" e_length="794"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.703">
            <gDNA_intron_boundary i_start="10406" i_stop="10302" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="10301" e_stop="9191" e_length="1111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11200" stop="10407"/>
              <exon start="10301" stop="9191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572228" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</gDNA_template>
            <first_frame> I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  S :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L </first_frame>
            <second_frame>  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *   : V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S   </second_frame>
            <third_frame>   I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10680" stop="10408"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9632" stop="9423"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10407" stop="10105"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10562" stop="10407"/>
                    <exon start="10301" stop="10260"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKCKSRQKKIMKVNVQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="10545" e_stop="9951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="10545" e_stop="9951" e_length="595"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10545" stop="9951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572226" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</gDNA_template>
            <first_frame> G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *  G  T  G  *  L  D  S  I  *  T  L  Q  L  I  R  L  K  K  P  R  *  L  V  F  C  N  Y  H  I  V  L  V  V  C  A  V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  </first_frame>
            <second_frame>  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  V  Q  A  N  *  I  A  F  E  L  C  N  *  L  D  *  K  N  P  D  S  *  F  F  A  I  I  I  *  Y  W  *  F  V  Q  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S </second_frame>
            <third_frame>   P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  R  Y  R  L  I  R  *  H  L  N  F  A  I  N  *  T  K  K  T  Q  I  A  S  F  L  Q  L  S  Y  S  I  G  S  L  C  S  Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10344" stop="10105"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVFCNYHIVLVVCAVKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="11187" e_stop="10719"/>
            <exon e_start="10459" e_stop="10412"/>
            <exon e_start="10301" e_stop="9239"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.451" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.703" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11187" e_stop="10719" e_length="469"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.451">
            <gDNA_intron_boundary i_start="10718" i_stop="10460" i_length="259"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10459" e_stop="10412" e_length="48"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.703">
            <gDNA_intron_boundary i_start="10411" i_stop="10302" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="10301" e_stop="9239" e_length="1063"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11187" stop="10719"/>
              <exon start="10459" stop="10412"/>
              <exon start="10301" stop="9239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572227" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAG : ATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</gDNA_template>
            <first_frame> R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R   : D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K   : F  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q   </first_frame>
            <second_frame>  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  :  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  </second_frame>
            <third_frame>   D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R :   S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  I :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10776" stop="10719"/>
                    <exon start="10459" stop="10412"/>
                    <exon start="10301" stop="10105"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEASRAIPIGSCCCMKMYRDQQSLNELSLICRPPKFKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9632" stop="9423"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="11190" e_stop="10407"/>
            <exon e_start="10301" e_stop="10132"/>
            <exon e_start="9932" e_stop="9513"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.703" e_score="0.954"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="11190" e_stop="10407" e_length="784"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.703">
            <gDNA_intron_boundary i_start="10406" i_stop="10302" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10301" e_stop="10132" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10131" i_stop="9933" i_length="199"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="9932" e_stop="9513" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11190" stop="10407"/>
              <exon start="10301" stop="10132"/>
              <exon start="9932" stop="9513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG : ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATG</gDNA_template>
            <first_frame> S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *   : V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  :  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M </first_frame>
            <second_frame>  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R :   F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L   </second_frame>
            <third_frame>   *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  S :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S   : D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10680" stop="10408"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10562" stop="10407"/>
                    <exon start="10301" stop="10260"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKCKSRQKKIMKVNVQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="16164" PGL_stop="12950"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16070" e_stop="15144"/>
            <exon e_start="13779" e_stop="13691"/>
            <exon e_start="13577" e_stop="12950"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.868" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.811" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16070" e_stop="15144" e_length="927"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.868">
            <gDNA_intron_boundary i_start="15143" i_stop="13780" i_length="1364"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13779" e_stop="13691" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.946" acc_prob="0.811">
            <gDNA_intron_boundary i_start="13690" i_stop="13578" i_length="113"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13577" e_stop="12950" e_length="628"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16070" stop="15144"/>
              <exon start="13779" stop="13691"/>
              <exon start="13577" stop="12950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16070" stop="15365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596961" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAG : CCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAG : GGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</gDNA_template>
            <first_frame> R  S  R  V  C  P  K  *  C  *  S  D  I  H  S  M  V  V  G  M  S  R  P  W  *  K  G  V  L  I  R  R  L  S  E  A  W  I  *  W  R  R  K  E  S  *  F  V  I  S  G  N  L  G  S  D  G  Q  G  V  D  K  L  E  F  L  A  L  L  D  G  F  P  C  R  V  E  S  N  I  H  L  S  M  L  L  Y  E  D  I  *  V  Y  N  R  D  I  E  G  L  L  S  G  G  H  V  L  F  I  L  L  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  *  L  *  Y  K  M  D  F  F  G  V  S  R  G  E  M  A  R  V  F  F  S  F  W  P  G  F  S  P  L  L  M  C  V  C  L  C  L  F  *  F  L  F  A  R  Y  A  L  I  V  R  S  A  T  N  Y  P  *  L  A  A  H  R  P  P  P  K  S  G  I  G  *  L  V  *  I  *  T  W  A  I  N  *  T  K  N  V  D  N  Y  R  F  F  I  *  *  P  T  E  A  T  *  F  V  L  S  Y  I  L  L  V  G  S  A  V  N  A  V  E  D  D  E  Y  D  L  *  V  L  S  F  E  H  L  Q  I  *  Q  N  Q  A  S  V  S  E  K  C  A  W  A  K  S  W  R  T  L  D  A  L  F  G  F  G  C  I  S  S  S  *  I  W  F  A  R  I  P  N  N  *  R  P  *  :  P  I  *  H  V  G  S  D  N  Q  *  *  D  L  W  N  Y  Q  I  L  T  C  G  V  S  N  W  K  M  R :   D  K  G  M  S  R  H  F  E  L  G  L  P  C  N  V  G  A  E  I  Q  L  I  F  L  Y  Q  H  P  R  N  L  M  E  L  L  T  G  T  L  W  N  C  L  L  R  *  *  L  V  K  R  I  S  A  L  Y  N  A  V  F  C  T  F  H  L  F  C  K  D  G  W  D  N  G  Q  S  G  K  V  R  I  D  Y  *  S  N  *  S  R  I  S  G  H  I  S  A  V  L  P  P  A  V  N  V  I  Q  R  R  L  L  D  C  *  R  L  *  R  S  I  Q  G  V  D  E  A  F  I  L  D  L  V  V  F  R  N  F  E  I  L  E  V  I  S  T  S  L  R  V  V  K  G  V  Q  I  T  V  Y  H  F  Y  *  G  V  T  C  Q  L  *  I  *  N  L  Y  M  *  T  *  S  F  V  Y  F  P  W  S  I  G  L  N  K  L  V  C  S  S  S  V  R  V  L  K  L  D  L  *  C  L  A </first_frame>
            <second_frame>  G  A  G  F  A  Q  S  N  V  D  Q  I  Y  T  A  W  W  L  G  *  A  A  P  G  R  K  E  S  *  F  V  V  S  A  K  L  G  S  D  G  V  E  R  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  *  I  N  L  N  S  W  R  C  W  M  D  F  P  V  A  W  R  A  I  S  I  *  V  C  C  C  M  K  I  Y  R  C  I  I  G  I  *  K  A  Y  Y  Q  G  V  M  S  C  L  Y  Y  F  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  N  F  N  I  K  W  I  F  L  G  F  R  G  G  R  W  H  G  F  F  F  L  F  G  P  G  S  L  P  S  *  C  V  C  V  C  A  F  S  D  S  C  L  H  V  M  L  S  S  S  D  Q  Q  R  T  I  L  N  W  P  P  T  A  H  R  P  N  Q  V  *  A  N  *  F  E  F  E  L  G  Q  L  I  R  Q  K  T  *  I  T  T  G  F  L  Y  D  S  Q  R  K  P  L  N  L  Y  Y  H  I  Y  C  W  *  V  L  L  L  T  P  *  K  M  M  N  M  T  F  K  F  *  V  L  N  I  S  K  S  N  K  T  K  H  L  F  L  K  N  V  L  G  Q  N  P  G  G  L  *  M  R  Y  L  D  S  G  A  Y  Q  A  R  K  Y  G  L  L  G  F  L  I  I  D  D  L  S :   Q  Y  D  M  L  D  Q  I  I  N  S  K  I  F  G  T  I  K  S  *  L  V  E  S  L  I  G  R  *   : G  I  R  E  *  A  D  T  S  N  *  A  C  H  V  M  *  V  P  R  F  N  *  Y  F  C  T  N  I  Q  G  T  L  W  N  C  L  Q  E  P  Y  G  I  A  C  *  D  D  D  L  *  R  G  Y  R  L  C  I  M  Q  Y  F  V  L  S  T  S  S  A  K  M  D  G  I  T  V  N  L  A  K  *  E  *  I  I  D  L  I  S  Q  G  L  V  A  I  F  Q  R  Y  Y  H  Q  L  *  M  S  S  N  D  D  Y  *  I  V  E  D  C  R  D  P  F  R  E  W  M  R  R  L  F  W  T  L  L  C  S  E  I  L  K  Y  *  R  *  S  V  L  A  *  G  *  S  K  E  Y  R  *  P  Y  I  I  S  I  K  A  L  H  A  N  C  K  F  K  I  F  I  C  E  R  E  A  L  C  I  F  R  G  V  *  A  *  T  N  L  F  V  P  L  V  S  V  Y  *  N  L  I  C  S  A  W   </second_frame>
            <third_frame>   E  Q  G  L  P  K  V  M  L  I  R  Y  T  Q  H  G  G  W  D  E  P  P  L  V  E  R  S  L  D  S  S  S  Q  R  S  L  D  L  M  A  *  K  G  V  L  I  R  H  L  R  E  S  W  L  R  W  P  G  C  R  *  T  *  I  L  G  V  V  G  W  I  S  L  S  R  G  E  Q  Y  P  F  E  Y  V  V  V  *  R  Y  I  G  V  *  S  G  Y  R  R  P  T  I  R  G  S  C  P  V  Y  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  T  L  I  *  N  G  F  F  W  G  F  E  G  G  D  G  T  G  F  F  F  F  L  A  R  V  L  S  P  L  D  V  C  V  F  V  P  F  L  I  L  V  C  T  L  C  S  H  R  Q  I  S  N  E  L  S  L  I  G  R  P  P  P  T  A  Q  I  R  Y  R  L  I  S  L  N  L  N  L  G  N  *  L  D  K  K  R  R  *  L  Q  V  F  Y  M  I  A  N  G  S  H  L  I  C  I  I  I  Y  I  V  G  R  F  C  C  *  R  R  R  R  *  *  I  *  P  L  S  F  E  F  *  T  S  P  N  L  T  K  P  S  I  C  F  *  K  M  C  L  G  K  I  L  E  D  F  R  C  A  I  W  I  R  V  H  I  K  L  V  N  M  V  C  S  D  S  *  *  L  T  T  L   : A  N  M  T  C  W  I  R  *  S  I  V  R  S  L  E  L  S  N  P  N  L  W  S  L  *  L  E  D  E  :  G  *  G  N  E  Q  T  L  R  I  R  P  A  M  *  C  R  C  R  D  S  T  D  I  F  V  P  T  S  K  E  P  Y  G  T  A  Y  R  N  L  M  E  L  L  A  E  M  M  T  C  E  E  D  I  G  S  V  *  C  S  I  L  Y  F  P  P  L  L  Q  R  W  M  G  *  R  S  I  W  Q  S  K  N  R  L  L  I  *  L  V  K  D  *  W  P  Y  F  S  G  I  T  T  S  C  K  C  H  P  T  T  T  T  R  L  L  K  I  V  E  I  H  S  G  S  G  *  G  V  Y  S  G  P  C  C  V  Q  K  F  *  N  T  R  G  D  Q  Y  *  L  K  G  S  Q  R  S  T  D  N  R  I  S  F  L  L  R  R  Y  M  P  I  V  N  L  K  S  L  Y  V  N  V  K  L  C  V  F  S  V  E  Y  R  L  E  Q  T  C  L  F  L  *  C  P  C  I  K  T  *  F  V  V  L  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15672" stop="15442"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGFFWGFEGGDGTGFFFFLARVLSPLDVCVFVPFLILVCTLCSHRQISNELSLIGRPPPTAQIRYRLISLNLNLGN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13743" stop="13691"/>
                    <exon start="13577" stop="13436"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLWNYQILTCGVSNWKMRDKGMSRHFELGLPCNVGAEIQLIFLYQHPRNLMELLTGTLWNCLLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="14624" e_stop="14230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14624" e_stop="14230" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14624" stop="14230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563950" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</gDNA_template>
            <first_frame> Q  F  W  R  S  L  W  W  M  *  S  A  E  E  N  S  P  K  D  R  G  I  M  Q  L  R  N  R  A  R  L  R  L  R  Y  S  V  L  L  L  A  A  D  V  H  Q  I  C  I  T  P  W  A  V  V  W  Y  R  H  S  F  L  *  A  C  F  M  I  *  A  N  P  V  K  F  Y  L  L  F  G  R  G  E  R  F  E  K  T  D  V  M  Q  T  *  *  G  E  L  L  V  *  K  G  N  V  R  F  *  L  C  S  I  C  A  R  N  T  L  R  M  H  S  L  F  M  L  L  N  F  *  N   </first_frame>
            <second_frame>  N  S  G  V  H  C  G  G  C  N  R  R  R  R  T  H  P  K  I  V  G  L  C  N  *  E  I  E  L  G  C  G  *  D  T  L  F  Y  C  W  L  Q  T  Y  I  R  Y  V  S  R  P  G  L  W  F  G  I  D  T  L  F  C  R  P  V  L  *  Y  R  Q  I  Q  S  S  F  I  Y  C  S  V  V  V  K  G  L  K  K  P  M  L  C  R  L  D  R  E  N  Y  W  Y  E  R  V  M  S  G  F  S  F  A  Q  Y  V  L  E  T  L  Y  A  C  I  V  C  S  C  Y  *  I  F  K  M  </second_frame>
            <third_frame>   I  L  A  F  I  V  V  D  V  I  G  G  G  E  L  T  Q  R  S  W  D  Y  A  I  E  K  S  S  *  V  A  V  E  I  L  C  S  I  V  G  C  R  R  T  S  D  M  Y  H  A  L  G  C  G  L  V  *  T  L  F  S  V  G  L  F  Y  D  I  G  K  S  S  Q  V  L  F  I  V  R  S  W  *  K  V  *  K  N  R  C  Y  A  D  L  I  G  R  T  T  G  M  K  G  *  C  Q  V  L  A  L  L  N  M  C  S  K  H  F  T  H  A  *  F  V  H  A  I  E  F  L  K  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0023N04.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16164" e_stop="15824"/>
            <exon e_start="15534" e_stop="15482"/>
            <exon e_start="15352" e_stop="15026"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.006" acc_prob="0.797" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.930" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16164" e_stop="15824" e_length="341"/>
          </exon>
          <intron i_serial="1" don_prob="0.006" acc_prob="0.797">
            <gDNA_intron_boundary i_start="15823" i_stop="15535" i_length="289"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15534" e_stop="15482" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.930">
            <gDNA_intron_boundary i_start="15481" i_stop="15353" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15352" e_stop="15026" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16164" stop="15824"/>
              <exon start="15534" stop="15482"/>
              <exon start="15352" stop="15026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGA : ATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAG : GTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</gDNA_template>
            <first_frame> L  S  A  A  S  K  I  I  R  L  T  I  S  L  Y  I  A  F  N  E  M  V  F  P  P  G  K  Y  R  V  A  E  E  Q  G  L  P  K  V  M  L  I  R  Y  T  Q  H  G  G  W  D  E  P  P  L  V  E  R  S  L  D  S  S  S  Q  R  S  L  D  L  M  A  *  K  G  V  L  I  R  H  L  R  E  S  W  L  R  W  P  G  C  R  *  T  *  I  L  G  V  V  G  W  I  S  L  S  R  G  E  Q  Y  P  F  E :   S  A  T  N  Y  P  *  L  A  A  H  R  P  P  P  K  S   : G  S  A  V  N  A  V  E  D  D  E  Y  D  L  *  V  L  S  F  E  H  L  Q  I  *  Q  N  Q  A  S  V  S  E  K  C  A  W  A  K  S  W  R  T  L  D  A  L  F  G  F  G  C  I  S  S  S  *  I  W  F  A  R  I  P  N  N  *  R  P  *  V  R  I  V  G  F  A  R  L  F  S  *  F  I  I  K  H  V  Q  N  R  N  T  E  T  I  L  W  N  V  F  N  S  M  L  S  E  F  *  </first_frame>
            <second_frame>  Y  P  P  P  R  K  *  F  G  *  Q  S  L  C  I  *  P  L  M  R  W  F  F  L  Q  V  S  I  V  L  L  R  S  R  V  C  P  K  *  C  *  S  D  I  H  S  M  V  V  G  M  S  R  P  W  *  K  G  V  L  I  R  R  L  S  E  A  W  I  *  W  R  R  K  E  S  *  F  V  I  S  G  N  L  G  S  D  G  Q  G  V  D  K  L  E  F  L  A  L  L  D  G  F  P  C  R  V  E  S  N  I  H  L   : N  Q  Q  R  T  I  L  N  W  P  P  T  A  H  R  P  N  Q  :  V  L  L  L  T  P  *  K  M  M  N  M  T  F  K  F  *  V  L  N  I  S  K  S  N  K  T  K  H  L  F  L  K  N  V  L  G  Q  N  P  G  G  L  *  M  R  Y  L  D  S  G  A  Y  Q  A  R  K  Y  G  L  L  G  F  L  I  I  D  D  L  R  Y  A  L  *  A  S  L  V  F  S  V  D  L  *  L  S  M  C  R  T  E  I  L  K  Q  F  C  G  M  F  L  I  L  C  S  Q  N  F  D </second_frame>
            <third_frame>   I  R  R  L  E  N  N  S  V  D  N  L  S  V  Y  S  L  *  *  D  G  F  S  S  R  *  V  S  C  C  *  G  A  G  F  A  Q  S  N  V  D  Q  I  Y  T  A  W  W  L  G  *  A  A  P  G  R  K  E  S  *  F  V  V  S  A  K  L  G  S  D  G  V  E  R  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  *  I  N  L  N  S  W  R  C  W  M  D  F  P  V  A  W  R  A  I  S  I  *  :  I  S  N  E  L  S  L  I  G  R  P  P  P  T  A  Q  I  R :   F  C  C  *  R  R  R  R  *  *  I  *  P  L  S  F  E  F  *  T  S  P  N  L  T  K  P  S  I  C  F  *  K  M  C  L  G  K  I  L  E  D  F  R  C  A  I  W  I  R  V  H  I  K  L  V  N  M  V  C  S  D  S  *  *  L  T  T  L  G  T  H  C  R  L  R  S  S  F  Q  L  I  Y  N  *  A  C  A  E  Q  K  Y  *  N  N  F  V  E  C  F  *  F  Y  A  L  R  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16164" stop="15946"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSAASKIIRLTISLYIAFNEMVFPPGKYRVAEEQGLPKVMLIRYTQHGGWDEPPLVERSLDSSSQRSLDLMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="13210" PGL_stop="13994"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13210" e_stop="13994"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="13210" e_stop="13994" e_length="785"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13210" stop="13994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCAATTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACATCAACTTTAACAAAAGCAAACGCATTTACATCAGAAGACCACAAAAGGACTTCTACATTCAAAA</gDNA_template>
            <first_frame> L  P  E  W  I  S  T  I  F  N  N  L  V  V  V  V  G  *  H  L  Q  L  V  V  I  P  L  K  Y  G  H  *  S  L  T  N  *  I  N  N  L  F  L  L  C  Q  I  D  R  Y  P  I  H  L  C  R  R  G  G  K  Y  K  I  L  H  Y  T  E  P  I  S  S  S  Q  V  I  I  S  A  S  N  S  I  R  F  L  *  A  V  P  *  G  S  L  D  V  G  T  K  I  S  V  E  S  R  H  L  H  Y  M  A  G  L  I  R  S  V  C  S  F  P  Y  P  F  M  *  L  I  V  I  I  Y  H  I  N  T  N  T  I  *  K  *  V  Y  T  D  H  L  K  K  S  L  *  N  F  *  *  I  F  S  P  H  L  P  I  R  D  S  T  S  *  D  L  I  V  P  K  I  L  L  L  I  I  *  S  N  M  S  Y  W  L  K  S  I  Y  R  R  F  T  N  L  I  K  L  V  K  N  Y  I  N  R  N  R  S  K  S  I  Y  L  N  W  L  K  N  I  Y  R  I  F  T  N  L  I  K  L  E  V  *  N  Y  I  N  F  N  K  S  K  R  I  Y  I  R  R  P  Q  K  D  F  Y  I  Q   </first_frame>
            <second_frame>  S  L  N  G  S  L  Q  S  S  T  I  *  *  S  S  L  D  D  I  Y  S  W  W  *  Y  R  *  N  M  A  T  N  P  *  L  I  R  S  I  I  Y  S  Y  F  A  R  L  T  V  I  P  S  I  F  A  E  E  V  E  S  T  K  Y  C  I  I  Q  S  R  Y  P  L  H  K  S  S  S  Q  Q  A  I  P  *  G  S  C  K  Q  F  H  K  V  P  W  M  L  V  Q  K  Y  Q  L  N  L  G  T  Y  I  T  W  Q  A  *  F  E  V  S  A  H  S  L  I  P  S  C  N  *  L  S  L  F  T  T  *  I  L  I  L  Y  R  N  R  Y  T  Q  T  I  S  R  S  H  F  E  I  S  D  K  Y  S  H  L  I  F  Q  L  E  T  P  Q  V  R  I  *  *  F  Q  R  S  Y  Y  *  L  S  D  P  T  C  H  I  G  *  K  V  Y  T  E  D  S  Q  T  *  S  S  W  *  K  I  T  S  T  V  T  E  A  K  A  Y  T  S  I  G  *  K  I  Y  T  E  Y  S  Q  T  *  S  N  W  K  Y  R  I  T  S  T  L  T  K  A  N  A  F  T  S  E  D  H  K  R  T  S  T  F  K  </second_frame>
            <third_frame>   P  *  M  D  L  Y  N  L  Q  Q  S  S  S  R  R  W  M  T  F  T  A  G  G  N  T  A  E  I  W  P  L  I  L  D  *  L  D  Q  *  S  I  L  T  L  P  D  *  P  L  S  H  P  S  L  Q  K  R  W  K  V  Q  N  T  A  L  Y  R  A  D  I  L  F  T  S  H  H  L  S  K  Q  F  H  K  V  P  V  S  S  S  I  R  F  L  G  C  W  Y  K  N  I  S  *  I  S  A  P  T  L  H  G  R  P  N  S  K  C  L  L  I  P  L  S  L  H  V  T  D  C  H  Y  L  P  H  K  Y  *  Y  Y  I  E  I  G  I  H  R  P  S  Q  E  V  T  L  K  F  L  I  N  I  L  T  S  S  S  N  *  R  L  H  K  L  G  F  D  S  S  K  D  L  T  I  D  Y  L  I  Q  H  V  I  L  A  E  K  Y  I  Q  K  I  H  K  L  D  Q  A  G  K  K  L  H  Q  P  *  Q  K  Q  K  H  I  P  Q  L  A  E  K  Y  I  Q  N  I  H  K  L  D  Q  T  G  S  I  E  L  H  Q  L  *  Q  K  Q  T  H  L  H  Q  K  T  T  K  G  L  L  H  S  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0023N04.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="26817" PGL_stop="24669"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26817" e_stop="24669"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="26817" e_stop="24669" e_length="2149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26817" stop="24669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567138" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTGTCCTCCTTGTAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTC</gDNA_template>
            <first_frame> L  C  P  P  C  K  A  E  L  F  S  I  K  A  K  H  F  *  P  P  F  Q  L  S  P  S  S  W  G  Y  S  V  S  P  L  K  T  C  S  P  I  S  S  Y  N  C  C  C  *  G  N  V  *  V  V  *  L  S  K  I  W  C  G  E  W  P  I  C  V  R  T  V  G  I  *  W  Q  L  L  S  K  S  *  S  K  S  S  S  R  S  S  S  N  S  K  S  N  S  S  S  S  N  N  N  S  W  V  L  I  L  C  V  S  A  H  G  L  P  I  T  R  P  *  L  I  A  P  L  *  D  M  D  L  P  G  R  V  L  Q  T  H  F  R  S  P  E  E  Q  I  A  P  S  R  D  F  S  S  L  T  W  N  I  I  R  P  G  L  G  L  L  I  S  A  V  D  R  V  V  S  L  T  Q  M  S  G  W  R  A  *  *  A  A  E  I  L  P  E  A  L  I  F  N  L  V  A  K  P  G  R  R  V  P  N  S  L  P  S  T  E  I  R  S  R  V  V  R  I  D  S  V  S  V  L  L  L  R  L  H  L  L  P  I  S  M  G  S  F  F  R  K  P  R  K  I  *  A  H  Y  N  H  R  H  L  H  G  S  H  H  L  H  L  L  L  Q  L  F  N  P  R  A  K  N  P  R  W  Y  Q  L  M  C  S  H  V  V  P  L  K  V  F  R  Q  N  H  C  *  N  P  W  W  N  V  Q  D  S  L  N  Q  S  L  K  M  *  *  N  H  *  F  D  *  G  N  Q  F  P  N  K  E  I  Q  W  S  E  L  G  S  I  S  *  K  L  F  T  I  G  F  R  R  V  K  Q  R  E  L  R  Q  S  L  V  L  R  R  R  S  S  L  C  H  T  K  P  L  M  M  H  V  P  T  Q  S  L  L  T  *  R  L  I  R  R  F  L  K  Q  L  K  K  Q  R  G  F  T  L  *  I  L  E  L  F  M  V  S  N  G  Q  L  F  Y  K  L  *  Q  L  D  Q  L  V  N  Q  S  V  L  E  S  L  A  F  H  Q  W  Y  W  V  T  L  R  Q  L  H  F  *  L  Q  G  I  V  F  V  T  S  R  S  F  W  I  L  T  S  N  S  N  Q  Y  *  L  Q  F  R  N  L  T  G  L  V  F  E  L  I  Q  M  K  S  *  L  *  T  S  C  C  S  C  T  I  Y  W  T  K  Q  M  L  V  *  K  L  H  *  V  *  P  N  H  *  I  Q  A  L  *  H  W  V  S  M  R  *  I  *  M  M  L  D  S  C  S  D  L  R  T  H  *  N  T  T  Q  L  F  S  S  H  W  I  R  A  *  P  E  T  P  L  R  E  Y  K  W  K  D  *  Y  L  A  G  E  L  P  E  R  W  A  *  T  M  A  E  P  E  E  N  V  W  K  I  K  N  I  G  K  N  *  W  K  G  L  V  L  N  Q  *  H  L  A  I  M  Q  *  V  K  Q  K  F  F  F  G  T  I  I  I  V  H  H  L  D  *  L  I  L  P  L  G  F  S  P  W  L  G  K  I  I  P  F  *  L  F  L  H  G  T  N  C  V  L  H  Q  F  C  *  V  L  S  S  K  C  L  N  L  N  F  I  A  L  C  R  L  K  S  *  Y  R  K  M  I  F  L  S  K  F  N  F  E  F  </first_frame>
            <second_frame>  F  V  L  L  V  R  L  S  F  S  Q  L  K  L  S  T  S  N  P  L  F  N  S  L  P  L  L  G  A  T  L  L  V  H  S  K  L  A  H  Q  F  L  L  I  T  V  V  V  E  V  M  C  E  *  C  S  L  V  R  F  G  V  E  N  G  L  Y  V  Y  G  Q  W  E  S  N  G  N  C  S  A  S  H  K  A  K  A  A  A  G  A  A  P  T  A  R  A  T  A  A  A  A  T  T  I  L  G  C  *  S  F  V  S  Q  P  M  D  F  Q  S  P  D  L  N  *  *  P  H  F  R  I  W  T  Y  R  V  G  F  C  R  P  I  S  G  R  R  R  N  R  *  R  R  A  G  I  S  V  P  *  L  G  T  S  F  D  R  V  *  V  C  *  F  R  R  W  T  G  W  *  V  *  L  R  *  V  D  G  E  L  D  R  R  R  R  F  Y  R  K  L  *  S  S  I  W  L  R  S  L  A  D  E  F  R  I  H  Y  P  L  R  R  S  V  P  E  L  S  E  S  T  Q  Y  R  F  C  S  S  A  S  T  F  F  R  S  Q  W  G  H  F  F  G  N  P  E  K  S  K  P  T  T  T  T  D  I  S  M  G  R  T  I  F  I  S  S  S  N  C  S  T  R  E  Q  R  I  Q  G  G  I  S  *  C  A  A  M  *  F  P  *  K  F  F  V  K  T  I  V  E  I  L  G  G  M  C  K  T  R  *  I  R  A  *  K  C  S  K  I  I  D  S  T  K  G  I  S  F  P  T  R  R  S  N  G  A  S  W  V  L  F  L  R  S  S  L  Q  *  A  F  V  V  S  S  R  E  N  S  V  N  L  W  Y  C  A  G  G  A  H  F  V  I  Q  S  L  *  *  C  M  S  L  L  K  V  C  S  L  N  G  *  S  G  D  S  *  S  N  *  K  S  N  E  D  S  H  C  R  F  W  N  C  S  W  Y  P  M  G  S  F  F  T  S  F  S  N  *  I  S  W  *  T  S  Q  C  *  N  L  W  H  S  I  S  G  I  G  *  L  S  V  S  F  T  F  S  Y  R  E  S  S  S  *  L  R  E  A  S  G  S  *  L  R  I  R  T  N  I  D  S  S  S  G  T  *  R  V  *  F  S  S  *  S  R  *  N  L  S  C  E  L  H  V  A  A  V  Q  F  T  G  R  N  K  C  W  C  K  N  C  T  E  F  S  Q  I  I  E  S  K  H  C  D  I  G  *  V  *  G  E  F  E  *  C  W  I  P  A  A  I  *  E  R  T  E  I  L  L  N  Y  F  R  V  I  G  S  E  L  D  P  R  L  R  *  E  S  T  S  G  K  T  D  T  W  P  E  N  C  R  S  G  G  P  R  R  W  R  N  Q  K  R  M  Y  G  R  *  R  T  L  E  R  I  N  G  R  G  W  F  *  T  S  N  T  *  P  L  C  N  E  S  S  K  N  S  S  L  E  L  *  L  *  F  I  I  W  I  N  *  F  C  P  W  V  S  L  L  G  L  E  R  *  S  P  F  D  C  F  F  M  A  L  I  V  F  Y  I  S  S  V  R  Y  F  L  L  S  A  *  I  *  I  S  L  L  S  V  D  *  K  V  S  I  E  R  *  Y  F  *  A  S  L  T  L  N  F </second_frame>
            <third_frame>   L  S  S  L  *  G  *  A  F  L  N  *  S  *  A  L  L  T  P  F  S  T  L  S  L  F  L  G  L  L  C  *  S  T  Q  N  L  L  T  N  F  F  L  *  L  L  L  L  R  *  C  V  S  S  V  A  *  *  D  L  V  W  R  M  A  Y  M  C  T  D  S  G  N  L  M  A  I  A  Q  Q  V  I  K  Q  K  Q  Q  Q  E  Q  L  Q  Q  Q  E  Q  Q  Q  Q  Q  Q  Q  Q  F  L  G  V  N  P  L  C  L  S  P  W  T  S  N  H  Q  T  L  T  N  S  P  T  L  G  Y  G  L  T  G  S  G  F  A  D  P  F  Q  V  A  G  G  T  D  S  A  E  P  G  F  Q  F  P  N  L  E  H  H  S  T  G  F  R  F  A  D  F  G  G  G  P  G  G  E  F  D  S  D  E  W  M  E  S  L  I  G  G  G  D  S  T  G  S  S  N  L  Q  S  G  C  E  A  W  Q  T  S  S  E  F  T  T  L  Y  G  D  P  F  P  S  C  P  N  R  L  S  I  G  S  A  P  P  P  P  P  S  S  D  L  N  G  V  I  F  S  E  T  Q  K  N  L  S  P  L  Q  P  Q  T  S  P  W  V  A  P  S  S  S  P  P  P  I  V  Q  P  A  S  K  E  S  K  V  V  S  V  D  V  Q  P  C  S  S  P  E  S  F  S  S  K  P  L  L  K  S  L  V  E  C  A  R  L  A  E  S  E  P  E  N  V  V  K  S  L  I  R  L  R  E  S  V  S  Q  Q  G  D  P  M  E  R  V  G  F  Y  F  L  E  A  L  Y  N  R  L  S  S  C  Q  A  E  R  T  P  S  I  F  G  T  A  P  E  E  L  T  L  S  Y  K  A  F  N  D  A  C  P  Y  S  K  F  A  H  L  T  A  N  Q  A  I  L  E  A  T  E  K  A  T  R  I  H  I  V  D  F  G  I  V  H  G  I  Q  W  A  A  F  L  Q  A  L  A  T  R  S  A  G  K  P  V  S  V  R  I  S  G  I  P  S  V  V  L  G  N  S  P  S  A  S  L  L  A  T  G  N  R  L  R  D  F  A  K  L  L  D  L  N  F  E  F  E  P  I  L  T  P  V  Q  E  L  N  G  S  S  F  R  V  D  P  D  E  I  L  A  V  N  F  M  L  Q  L  Y  N  L  L  D  E  T  N  V  G  V  K  T  A  L  S  L  A  K  S  L  N  P  S  I  V  T  L  G  E  Y  E  V  N  L  N  D  V  G  F  L  Q  R  F  K  N  A  L  K  Y  Y  S  T  I  F  E  S  L  D  P  S  L  T  R  D  S  A  E  R  V  Q  V  E  R  L  I  L  G  R  R  I  A  G  A  V  G  L  D  D  G  G  T  R  R  E  C  M  E  D  K  E  H  W  K  E  L  M  E  G  A  G  F  K  P  V  T  L  S  H  Y  A  M  S  Q  A  K  I  L  L  W  N  Y  N  Y  S  S  S  F  G  L  I  D  S  A  P  G  F  L  S  L  A  W  K  D  N  P  L  L  T  V  S  S  W  H  *  L  C  S  T  S  V  L  L  G  T  F  F  *  V  L  K  F  K  F  H  C  S  L  *  I  K  K  L  V  *  K  D  D  I  F  E  Q  V  *  L  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26641" stop="24797"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1842</number_coding_nucleotides>
                  <number_encoded_amino_acids>614</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLVWRMAYMCTDSGNLMAIAQQVIKQKQQQEQLQQQEQQQQQQQQFLGVNPLCLSPWTSNHQTLTNSPTLGYGLTGSGFADPFQVAGGTDSAEPGFQFPNLEHHSTGFRFADFGGGPGGEFDSDEWMESLIGGGDSTGSSNLQSGCEAWQTSSEFTTLYGDPFPSCPNRLSIGSAPPPPPSSDLNGVIFSETQKNLSPLQPQTSPWVAPSSSPPPIVQPASKESKVVSVDVQPCSSPESFSSKPLLKSLVECARLAESEPENVVKSLIRLRESVSQQGDPMERVGFYFLEALYNRLSSCQAERTPSIFGTAPEELTLSYKAFNDACPYSKFAHLTANQAILEATEKATRIHIVDFGIVHGIQWAAFLQALATRSAGKPVSVRISGIPSVVLGNSPSASLLATGNRLRDFAKLLDLNFEFEPILTPVQELNGSSFRVDPDEILAVNFMLQLYNLLDETNVGVKTALSLAKSLNPSIVTLGEYEVNLNDVGFLQRFKNALKYYSTIFESLDPSLTRDSAERVQVERLILGRRIAGAVGLDDGGTRRECMEDKEHWKELMEGAGFKPVTLSHYAMSQAKILLWNYNYSSSFGLIDSAPGFLSLAWKDNPLLTVSSWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="45020" PGL_stop="37921"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45020" e_stop="44494"/>
            <exon e_start="44054" e_stop="43887"/>
            <exon e_start="43348" e_stop="43261"/>
            <exon e_start="42904" e_stop="42758"/>
            <exon e_start="42569" e_stop="42429"/>
            <exon e_start="42133" e_stop="42048"/>
            <exon e_start="41958" e_stop="41866"/>
            <exon e_start="41770" e_stop="41707"/>
            <exon e_start="41503" e_stop="41360"/>
            <exon e_start="40601" e_stop="40414"/>
            <exon e_start="40299" e_stop="40125"/>
            <exon e_start="40051" e_stop="39881"/>
            <exon e_start="39722" e_stop="39653"/>
            <exon e_start="39558" e_stop="39438"/>
            <exon e_start="39349" e_stop="39312"/>
            <exon e_start="38294" e_stop="37921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="45020" e_stop="44494" e_length="527"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="44493" i_stop="44055" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44054" e_stop="43887" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43886" i_stop="43349" i_length="538"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="43348" e_stop="43261" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="43260" i_stop="42905" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42904" e_stop="42758" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="42757" i_stop="42570" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="42569" e_stop="42429" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="42428" i_stop="42134" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="42133" e_stop="42048" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="42047" i_stop="41959" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="41958" e_stop="41866" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="41865" i_stop="41771" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="41770" e_stop="41707" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="41706" i_stop="41504" i_length="203"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="41503" e_stop="41360" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.943" acc_prob="0.895">
            <gDNA_intron_boundary i_start="41359" i_stop="40602" i_length="758"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="40601" e_stop="40414" e_length="188"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="40413" i_stop="40300" i_length="114"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="40299" e_stop="40125" e_length="175"/>
          </exon>
          <intron i_serial="11" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="40124" i_stop="40052" i_length="73"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="40051" e_stop="39881" e_length="171"/>
          </exon>
          <intron i_serial="12" don_prob="0.987" acc_prob="0.929">
            <gDNA_intron_boundary i_start="39880" i_stop="39723" i_length="158"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="39722" e_stop="39653" e_length="70"/>
          </exon>
          <intron i_serial="13" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="39652" i_stop="39559" i_length="94"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="39558" e_stop="39438" e_length="121"/>
          </exon>
          <intron i_serial="14" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="39437" i_stop="39350" i_length="88"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="39349" e_stop="39312" e_length="38"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="39311" i_stop="38295" i_length="1017"/>
          </intron>
          <exon e_serial="16" e_score="0.997">
            <gDNA_exon_boundary e_start="38294" e_stop="37921" e_length="374"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45020" stop="44494"/>
              <exon start="44054" stop="43887"/>
              <exon start="43348" stop="43261"/>
              <exon start="42904" stop="42758"/>
              <exon start="42569" stop="42429"/>
              <exon start="42133" stop="42048"/>
              <exon start="41958" stop="41866"/>
              <exon start="41770" stop="41707"/>
              <exon start="41503" stop="41360"/>
              <exon start="40601" stop="40414"/>
              <exon start="40299" stop="40125"/>
              <exon start="40051" stop="39881"/>
              <exon start="39722" stop="39653"/>
              <exon start="39558" stop="39438"/>
              <exon start="39349" stop="39312"/>
              <exon start="38294" stop="37921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580353" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCATTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGACGGTGGCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG : GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG : GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</gDNA_template>
            <first_frame> V  S  F  R  I  L  K  E  *  Y  F  I  F  S  C  E  K  T  F  F  *  D  F  I  I  F  R  F  G  I  S  Q  N  *  Y  F  *  N  K  I  Y  T  L  N  V  I  L  L  F  *  V  Y  I  N  I  N  *  F  C  D  *  I  T  G  L  S  Y  R  A  *  R  W  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L  F  P  D  L  *  L  W  K  F  E  K  G  V  V  *  :  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  :  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y  I  L  Y  F  L  H  F  D </first_frame>
            <second_frame>  F  H  L  E  F  *  K  N  D  I  S  Y  F  L  A  K  K  L  F  F  R  I  S  L  Y  S  G  L  E  Y  L  K  I  N  I  F  K  I  K  F  T  R  *  T  *  Y  Y  Y  F  R  S  T  *  T  *  I  N  F  A  I  K  L  R  V  C  R  T  E  R  D  G  G  R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C  C  F  Q  I  Y  D  Y  G  N  S  R  R  A  W  C  R :   T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R :   R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  Y  S  T  S  C  I  L   </second_frame>
            <third_frame>   F  I  *  N  F  K  R  M  I  F  H  I  F  L  R  K  N  F  F  L  G  F  H  Y  I  Q  V  W  N  I  S  K  L  I  F  L  K  *  N  L  H  V  K  R  N  T  I  I  L  G  L  H  K  H  K  L  I  L  R  L  N  Y  G  F  V  V  Q  S  V  T  V  A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  V  S  R  S  M  T  M  E  I  R  E  G  R  G  V   : G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P   : G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  Y  T  L  L  L  A  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44682" stop="44494"/>
                    <exon start="44054" stop="43887"/>
                    <exon start="43348" stop="43261"/>
                    <exon start="42904" stop="42758"/>
                    <exon start="42569" stop="42429"/>
                    <exon start="42133" stop="42048"/>
                    <exon start="41958" stop="41866"/>
                    <exon start="41770" stop="41707"/>
                    <exon start="41503" stop="41360"/>
                    <exon start="40601" stop="40414"/>
                    <exon start="40299" stop="40125"/>
                    <exon start="40051" stop="39881"/>
                    <exon start="39722" stop="39653"/>
                    <exon start="39558" stop="39438"/>
                    <exon start="39349" stop="39312"/>
                    <exon start="38294" stop="38192"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1983</number_coding_nucleotides>
                  <number_encoded_amino_acids>661</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="39152" e_stop="38426"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="39152" e_stop="38426" e_length="727"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39152" stop="38426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAA</gDNA_template>
            <first_frame> *  E  S  V  P  S  V  I  S  Q  V  E  F  G  K  V  G  C  M  Q  T  L  R  R  P  C  *  G  R  K  V  V  S  D  R  S  S  A  Q  E  K  H  D  L  K  L  I  *  Q  I  L  K  *  K  L  *  *  K  F  Y  G  N  E  K  *  G  Q  Q  K  Q  *  R  *  P  Q  *  K  R  Q  Q  Q  K  *  L  K  N  *  R  I  G  *  *  *  *  *  F  *  *  E  G  A  N  K  V  L  *  A  S  S  L  E  P  C  S  P  V  G  K  R  E  I  A  *  L  P  T  N  P  L  Y  P  A  F  M  F  S  H  L  W  S  C  S  Q  *  A  E  D  V  L  Y  Y  V  L  I  V  S  P  Q  F  F  F  G  L  P  L  P  L  V  G  P  I  T  G  S  L  S  Q  V  S  P  L  H  W  N  F  C  V  P  S  L  Y  M  S  E  Q  S  L  I  L  P  S  C  I  F  S  L  V  V  Y  P  Y  I  H  H  L  V  K  L  M  *  Y  F  K  K  L  F  F  F  C  *  N  S  I  I  L  Q  K  L  L  S  I  G  </first_frame>
            <second_frame>  E  N  L  Y  L  V  *  S  H  K  W  N  L  E  R  W  G  V  C  R  P  Y  A  D  L  V  E  V  E  K  *  F  L  T  D  P  R  L  K  K  S  M  I  *  N  *  S  D  K  Y  *  S  K  S  Y  S  E  N  F  M  E  M  R  S  R  G  N  K  N  N  K  D  S  L  S  K  R  D  N  N  K  N  S  *  K  T  E  E  *  D  N  N  N  N  N  S  D  K  R  E  Q  T  R  C  S  K  L  V  A  W  N  H  A  L  P  W  E  R  E  K  L  L  D  Y  L  L  T  P  S  T  L  P  S  C  F  P  I  F  G  H  V  L  N  E  L  K  M  C  Y  I  M  S  *  L  F  L  P  N  S  F  S  V  Y  L  Y  L  L  L  G  P  S  L  A  A  S  L  K  S  H  L  F  I  G  T  F  V  F  L  L  S  T  C  P  N  N  L  *  S  F  L  P  A  S  F  L  S  *  C  I  H  T  S  I  I  S  *  N  *  C  N  T  S  K  N  Y  F  F  F  V  K  I  V  L  S  F  K  N  Y  Y  P  S  E </second_frame>
            <third_frame>   R  I  C  T  *  C  D  L  T  S  G  I  W  K  G  G  V  Y  A  D  L  T  P  T  L  L  R  *  K  S  S  F  *  Q  I  L  G  S  R  K  A  *  S  K  T  D  L  T  N  T  K  V  K  A  I  V  K  I  L  W  K  *  E  V  G  A  T  K  T  I  K  I  A  S  V  K  E  T  T  T  K  I  A  E  K  L  K  N  R  I  I  I  I  I  I  L  I  R  G  S  K  Q  G  A  L  S  *  *  P  G  T  M  L  S  R  G  K  E  R  N  C  L  I  T  Y  *  P  P  L  P  C  L  H  V  F  P  S  L  V  M  F  S  M  S  *  R  C  V  I  L  C  L  N  C  F  S  P  I  L  F  R  S  T  S  T  S  C  W  A  H  H  W  Q  P  L  S  S  L  T  S  S  L  E  L  L  C  S  F  S  L  H  V  R  T  I  S  N  P  S  F  L  H  L  F  S  R  S  V  S  I  H  P  S  S  R  E  I  D  V  I  L  Q  K  I  I  F  F  L  L  K  *  Y  Y  P  S  K  I  I  I  H  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38715" stop="38458"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RCVILCLNCFSPILFRSTSTSCWAHHWQPLSSLTSSLELLCSFSLHVRTISNPSFLHLFSRSVSIHPSSREIDVILQKIIFFLLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38720" stop="38493"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEDVLYYVLIVSPQFFFGLPLPLVGPITGSLSQVSPLHWNFCVPSLYMSEQSLILPSCIFSLVVYPYIHHLVKLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="43344" e_stop="43261"/>
            <exon e_start="42904" e_stop="42758"/>
            <exon e_start="42569" e_stop="42429"/>
            <exon e_start="42133" e_stop="42048"/>
            <exon e_start="41958" e_stop="41866"/>
            <exon e_start="41770" e_stop="41707"/>
            <exon e_start="41503" e_stop="41406"/>
            <exon e_start="39692" e_stop="39653"/>
            <exon e_start="39558" e_stop="39438"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43344" e_stop="43261" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="43260" i_stop="42905" i_length="356"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42904" e_stop="42758" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="42757" i_stop="42570" i_length="188"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42569" e_stop="42429" e_length="141"/>
          </exon>
          <intron i_serial="3" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="42428" i_stop="42134" i_length="295"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42133" e_stop="42048" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="42047" i_stop="41959" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41958" e_stop="41866" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="41865" i_stop="41771" i_length="95"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="41770" e_stop="41707" e_length="64"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="41706" i_stop="41504" i_length="203"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="41503" e_stop="41406" e_length="98"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="41405" i_stop="39693" i_length="1713"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="39692" e_stop="39653" e_length="40"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="39652" i_stop="39559" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="0.983">
            <gDNA_exon_boundary e_start="39558" e_stop="39438" e_length="121"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43344" stop="43261"/>
              <exon start="42904" stop="42758"/>
              <exon start="42569" stop="42429"/>
              <exon start="42133" stop="42048"/>
              <exon start="41958" stop="41866"/>
              <exon start="41770" stop="41707"/>
              <exon start="41503" stop="41406"/>
              <exon start="39692" stop="39653"/>
              <exon start="39558" stop="39438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT : GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG</gDNA_template>
            <first_frame> V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L :   F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y  </first_frame>
            <second_frame>  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C   : C  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T </second_frame>
            <third_frame>   I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  :  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43342" stop="43261"/>
                    <exon start="42904" stop="42758"/>
                    <exon start="42569" stop="42429"/>
                    <exon start="42133" stop="42048"/>
                    <exon start="41958" stop="41866"/>
                    <exon start="41770" stop="41707"/>
                    <exon start="41503" stop="41406"/>
                    <exon start="39692" stop="39672"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSMMFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="55134" PGL_stop="50624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55134" e_stop="54856"/>
            <exon e_start="54789" e_stop="54465"/>
            <exon e_start="54178" e_stop="54026"/>
            <exon e_start="53920" e_stop="53684"/>
            <exon e_start="53597" e_stop="53505"/>
            <exon e_start="53333" e_stop="53255"/>
            <exon e_start="53143" e_stop="53037"/>
            <exon e_start="51229" e_stop="50624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.854" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.964" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55134" e_stop="54856" e_length="279"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="54855" i_stop="54790" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54789" e_stop="54465" e_length="325"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="54464" i_stop="54179" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="54178" e_stop="54026" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.854" acc_prob="0.983">
            <gDNA_intron_boundary i_start="54025" i_stop="53921" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53920" e_stop="53684" e_length="237"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="53683" i_stop="53598" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="53597" e_stop="53505" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.961" acc_prob="1.000">
            <gDNA_intron_boundary i_start="53504" i_stop="53334" i_length="171"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="53333" e_stop="53255" e_length="79"/>
          </exon>
          <intron i_serial="6" don_prob="0.930" acc_prob="0.919">
            <gDNA_intron_boundary i_start="53254" i_stop="53144" i_length="111"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53143" e_stop="53037" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.964">
            <gDNA_intron_boundary i_start="53036" i_stop="51230" i_length="1807"/>
          </intron>
          <exon e_serial="8" e_score="0.997">
            <gDNA_exon_boundary e_start="51229" e_stop="50624" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55134" stop="54856"/>
              <exon start="54789" stop="54465"/>
              <exon start="54178" stop="54026"/>
              <exon start="53920" stop="53684"/>
              <exon start="53597" stop="53505"/>
              <exon start="53333" stop="53255"/>
              <exon start="53143" stop="53037"/>
              <exon start="51229" stop="50624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG : GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG : TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG : TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA : GAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGT : GTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAG : GTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAG : AACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTGTTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</gDNA_template>
            <first_frame> A  S  E  T  E  L  I  E  C  *  N  *  K  R  R  R  K  K  *  R  R  R  N  N  I  N  V  *  L  R  V  F  S  F  S  Y  S  S  N  L  S  S  T  Y  N  S  *  S  I  Q  K  K  T  Q  L  S  K  S  S  T  R  G  Y  G  L  A  F  S  W  *  N  Y  W  L  F  E  T  L  F  S  Y  Y  Y  W  R  F  H  A  R  S  Y  F  *  :  V  W  E  N  F  Q  V  K  F  V  W  R  A  N  N  S  F  S  R  C  R  A  K  Q  I  H  S  A  E  *  R  E  I  I  *  V  *  L  S  K  K  Y  R  W  D  T  W  *  M  V  Y  V  S  S  S  W  T  N  A  *  R  Y  E  D  D  F  S  E  F  F  E  Q  C  *  A  K  E  S  T  F  K  *  S  *  K  A  Y  F  A  C  S  W  L  L  E  T  G  F  C  C  L  C  T  R  *  S  K  E   : V  N  I  Q  L  Y  G  R  A  Y  H  E  S  T  T  W  K  S  R  D  R  E  A  E  K  R  V  H  H  I  Y  E  R  S  G  F  C  S  I  E  F  S  R  N  S  L  Q  K  G  L  T   : V  S  I  N  N  S  W  I  Y  *  E  K  N  G  G  E  A  *  G  N  E  Q  K  R  K  R  P  S  R  L  G  S  E  E  F  K  S  L  K  R  A  N  S  *  F  A  T  E  F  A  L  C  W  P  *  N  F  I  S  S  N  S  S  V  Y  F  L  T  R  K  L  S  C  C  C  S  T  I  N   : R  R  A  L  G  D  F  P  G  K  K  T  V  R  R  N  R  I  K  L  G  *  L  Q  E  N  G  I  H  P  M   : C  Y  *  *  D  S  K  T  W  E  C  S  E  V  S  A  Q  E  S  C  E  R  C  S  I  *  R :   L  *  Y  S  M  W  M  E  S  V  A  G  D  F  S  S  A  F  R  S  F  T  F  R  P  T  S  R  L  *  S  L  E  M  A   : E  R  R  R  V  A  F  R  *  R  R  K  H  R  H  K  Q  H  N  K  K  *  *  *  F  H  A  I  W  G  R  S  T  S  M  C  R  I  *  T  G  Q  T  *  D  G  H  F  H  S  L  S  C  S  *  F  S  L  E  I  S  C  N  *  S  G  F  C  L  S  L  R  R  F  S  Q  C  P  T  Y  Q  Y  P  T  S  I  V  K  *  I  T  *  L  A  L  I  H  R  I  R  I  Y  V  R  S  H  I  A  S  S  M  G  K  H  F  I  I  L  Y  K  *  K  M  V  A  E  Q  M  G  K  R  M  V  L  E  M  I  Q  T  K  R  D  V  L  *  I  *  L  I  I  *  E  V  K  Q  L  L  Q  F  L  F  S  L  F  F  F  C  F  I  S  S  L  V  F  F  F  F  F  L  S  V  T  *  Y  I  I  F  Y  V  I  K  Y  S  E  I  I  R  F  S  V  F  T  </first_frame>
            <second_frame>  L  Q  K  Q  S  L  L  S  V  E  T  E  K  E  E  E  R  N  R  E  E  G  I  T  S  M  S  D  L  E  F  F  L  F  L  I  P  P  I  L  A  V  L  I  I  L  N  L  F  K  R  K  H  N  F  Q  N  L  P  P  G  D  M  G  W  P  F  L  G  E  T  I  G  Y  L  R  P  Y  S  A  T  T  I  G  D  F  M  Q  D  H  I  S  R :   Y  G  K  I  F  K  S  N  L  F  G  E  P  T  I  V  S  A  D  A  G  L  N  R  Y  I  L  Q  N  E  G  R  L  F  E  C  N  Y  P  R  S  I  G  G  I  L  G  K  W  S  M  L  V  Q  V  G  Q  M  H  R  D  M  R  M  I  S  L  N  F  L  S  N  A  R  L  R  N  Q  L  L  S  E  V  E  K  H  T  L  L  V  L  G  S  W  K  Q  D  S  V  V  C  A  Q  D  E  A  K  K  :  L  T  F  N  F  M  A  E  H  I  M  S  L  Q  P  G  N  P  E  T  E  K  L  K  K  E  Y  I  T  F  M  K  G  V  V  S  A  P  L  N  F  P  G  T  A  Y  R  K  A  L  Q  :  S  R  S  T  I  L  G  F  I  E  R  K  M  E  E  R  L  K  E  M  N  R  N  E  N  D  L  L  G  W  V  L  K  N  S  N  L  S  K  E  Q  I  L  D  L  L  L  S  L  L  F  A  G  H  E  T  S  S  V  A  I  A  L  S  I  F  L  L  E  S  C  P  A  A  V  Q  Q  L  T  :  E  E  H  L  E  I  S  R  A  K  K  Q  S  G  E  T  E  L  N  W  D  D  Y  K  K  M  E  F  T  Q  C  :  V  I  N  E  T  L  R  L  G  N  V  V  R  F  L  H  R  K  A  V  K  D  V  R  Y  K   : G  Y  D  I  P  C  G  W  K  V  L  P  V  I  S  A  A  H  L  D  P  S  L  F  D  R  P  H  D  F  D  P  W  R  W  Q  :  N  A  E  E  S  P  S  G  K  G  G  S  T  G  T  S  S  T  T  K  S  S  N  N  F  M  P  F  G  G  G  P  R  L  C  A  G  S  E  L  A  K  L  E  M  A  I  F  I  H  Y  L  V  L  N  F  H  W  K  L  A  A  T  D  Q  A  F  A  Y  P  Y  V  D  F  P  N  A  L  P  I  N  I  Q  H  R  S  L  N  K  L  H  D  *  P  *  F  I  V  L  E  S  T  F  A  R  T  S  H  R  L  W  V  N  I  L  L  Y  C  I  N  K  K  W  *  L  N  K  W  E  R  G  W  Y  L  K  *  F  K  P  K  E  M  F  C  K  S  S  *  L  S  R  R  *  S  S  C  Y  S  F  C  S  L  F  F  F  F  A  L  S  L  L  L  F  F  F  S  F  F  F  P  L  R  S  T  *  F  S  M  *  L  N  T  A  K  L  F  D  S  P  F  L  L </second_frame>
            <third_frame>   F  R  N  R  A  Y  *  V  L  K  L  K  K  K  K  K  E  I  E  K  K  E  *  H  Q  C  L  T  *  S  F  F  F  F  L  F  L  Q  S  *  Q  Y  L  *  F  L  I  Y  S  K  E  N  T  T  F  K  I  F  H  Q  G  I  W  V  G  L  F  L  V  K  L  L  V  I  *  D  L  I  Q  L  L  L  L  E  I  S  C  K  I  I  F  L   : G  M  G  K  F  S  S  Q  I  C  L  E  S  Q  Q  *  F  Q  Q  M  Q  G  *  T  D  T  F  C  R  M  K  G  D  Y  L  S  V  I  I  Q  E  V  *  V  G  Y  L  V  N  G  L  C  *  F  K  L  D  K  C  I  E  I  *  G  *  F  L  *  I  F  *  A  M  L  G  *  G  I  N  F  *  V  K  L  K  S  I  L  C  L  F  L  A  L  G  N  R  I  L  L  F  V  H  K  M  K  Q  R  S :   *  H  S  T  L  W  Q  S  I  S  *  V  Y  N  L  E  I  Q  R  Q  R  S  *  K  K  S  T  S  H  L  *  K  E  W  F  L  L  H  *  I  F  Q  E  Q  L  T  E  R  P  Y  S :   L  D  Q  Q  F  L  D  L  L  R  E  K  W  R  R  G  L  R  K  *  T  E  T  K  T  T  F  *  V  G  F  *  R  I  Q  I  S  Q  K  S  K  F  L  I  C  Y  *  V  C  S  L  L  A  M  K  L  H  Q  *  Q  *  L  C  L  F  S  Y  S  K  A  V  L  L  L  F  N  N  *  Q :   K  S  T  W  R  F  P  G  Q  K  N  S  Q  E  K  Q  N  *  I  G  M  T  T  R  K  W  N  S  P  N  V :   L  L  M  R  L  *  D  L  G  M  *  *  G  F  C  T  G  K  L  *  K  M  F  D  I  K  :  V  M  I  F  H  V  D  G  K  C  C  R  *  F  Q  Q  R  I  *  I  L  H  F  S  T  D  L  T  T  L  I  L  G  D  G  R :   T  Q  K  S  R  L  Q  V  K  E  E  A  Q  A  Q  A  A  Q  Q  K  V  V  I  I  S  C  H  L  G  E  V  H  V  Y  V  Q  D  L  N  W  P  N  L  R  W  P  F  S  F  T  I  L  F  L  I  F  T  G  N  *  L  Q  L  I  R  L  L  P  I  L  T  *  I  F  P  M  P  Y  L  S  I  S  N  I  D  R  *  I  N  Y  M  T  S  P  N  S  S  Y  *  N  L  R  S  L  A  H  R  I  V  Y  G  *  T  F  Y  Y  I  V  *  I  K  N  G  S  *  T  N  G  K  E  D  G  T  *  N  D  S  N  Q  K  R  C  F  V  N  L  A  N  Y  L  G  G  E  A  A  A  T  V  F  V  L  S  F  F  F  L  L  Y  L  F  S  C  F  F  F  L  F  S  F  R  Y  V  V  H  N  F  L  C  N  *  I  Q  R  N  Y  S  I  L  R  F  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55133" stop="54856"/>
                    <exon start="54789" stop="54465"/>
                    <exon start="54178" stop="54026"/>
                    <exon start="53920" stop="53684"/>
                    <exon start="53597" stop="53505"/>
                    <exon start="53333" stop="53255"/>
                    <exon start="53143" stop="53037"/>
                    <exon start="51229" stop="50951"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1548</number_coding_nucleotides>
                  <number_encoded_amino_acids>516</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQKQSLLSVETEKEEERNREEGITSMSDLEFFLFLIPPILAVLIILNLFKRKHNFQNLPPGDMGWPFLGETIGYLRPYSATTIGDFMQDHISRYGKIFKSNLFGEPTIVSADAGLNRYILQNEGRLFECNYPRSIGGILGKWSMLVQVGQMHRDMRMISLNFLSNARLRNQLLSEVEKHTLLVLGSWKQDSVVCAQDEAKKLTFNFMAEHIMSLQPGNPETEKLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSTILGFIERKMEERLKEMNRNENDLLGWVLKNSNLSKEQILDLLLSLLFAGHETSSVAIALSIFLLESCPAAVQQLTEEHLEISRAKKQSGETELNWDDYKKMEFTQCVINETLRLGNVVRFLHRKAVKDVRYKGYDIPCGWKVLPVISAAHLDPSLFDRPHDFDPWRWQNAEESPSGKGGSTGTSSTTKSSNNFMPFGGGPRLCAGSELAKLEMAIFIHYLVLNFHWKLAATDQAFAYPYVDFPNALPINIQHRSLNKLHD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="73689" PGL_stop="67624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73689" e_stop="73296"/>
            <exon e_start="68068" e_stop="67624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="0.997"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="73689" e_stop="73296" e_length="394"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="73295" i_stop="68069" i_length="5227"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="68068" e_stop="67624" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73689" stop="73296"/>
              <exon start="68068" stop="67624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574325" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</gDNA_template>
            <first_frame> N  L  F  L  L  I  K  *  H  T  V  L  K  K  S  S  I  L  F  R  L  T  V  Y  W  G  H  A  N  P  S  Q  F  S  I  F  F  F  V  F  L  L  R  W  T  S  V  T  A  Y  S  E  G  S  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : G  L  M  L  Q  L  L  Y  S  A  P  C  Y  L  V  C  L  Y  Y  H  H  M  W  P  F  I  Y  D  I  T  G  V  P  F  S  L  *  A  L  P  L  P  F  Q  C  V  *  E  C  Y  D  R  L  M  Q  E  R  K  *  D  S  Y  L  C  L  C  E  L  P  S  T  S  G  S  T  K  Q  W  F  K  *  K  E  Y  L  L  H  K  S  A  L  Q  L  *  *  Y  S  S  L  I  F  V  T  *  A  D  Q  S  S  A  V  K  D  G  T  H  P  S  Y  Y  S  *  *  L  I  H  *  E  T  G  F  R  R  S  I  S  S  L  *  N  E  Q  P  E  L  K  V  S   </first_frame>
            <second_frame>  I  C  F  S  *  *  N  S  I  L  Y  *  K  N  L  L  S  Y  F  V  *  L  C  T  G  V  M  R  I  P  L  S  L  A  F  S  S  S  F  S  F  C  V  G  P  V  *  Q  L  I  R  R  D  R  F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  G  *  C  C  S  C  F  I  L  R  L  V  I  W  C  A  Y  I  I  I  I  C  G  P  L  F  T  T  L  L  E  F  L  S  H  Y  K  P  C  H  Y  P  S  S  A  S  E  N  V  T  T  G  S  C  K  K  E  S  K  T  V  T  F  V  Y  V  N  F  L  L  L  L  E  A  P  N  S  G  L  S  E  R  N  T  F  C  T  K  V  L  S  N  C  S  N  T  V  L  *  S  S  S  H  R  L  T  N  L  L  L  *  K  M  G  H  T  L  H  I  T  L  D  D  S  F  I  K  K  Q  D  L  D  D  Q  L  A  P  Y  E  M  N  N  Q  S  S  R  F  Q  </second_frame>
            <third_frame>   F  V  S  L  N  K  I  A  Y  C  I  K  K  I  F  Y  L  I  S  S  N  C  V  L  G  S  C  E  S  L  S  V  *  H  F  L  L  R  F  P  F  A  L  D  Q  C  N  S  L  F  G  G  I  V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  W :   A  D  V  A  V  A  L  F  C  A  L  L  F  G  V  L  I  L  S  S  Y  V  A  L  Y  L  R  H  Y  W  S  S  F  L  I  I  S  L  A  I  T  L  P  V  R  L  R  M  L  R  Q  A  H  A  R  K  K  V  R  Q  L  P  L  S  M  *  T  S  F  Y  F  W  K  H  Q  T  V  V  *  V  K  G  I  P  F  A  Q  K  C  S  P  I  V  V  I  Q  F  F  D  L  R  H  I  G  *  P  I  F  C  C  E  R  W  D  T  P  F  I  L  L  L  M  T  H  S  L  R  N  R  I  *  T  I  N  *  L  P  M  K  *  T  T  R  A  Q  G  F  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73441" stop="73296"/>
                    <exon start="68068" stop="67870"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRRIRFSIVLVNMITRSKLVEQLRDYQIRSQHKCPPLTFFSPKLYLSNWADVAVALFCALLFGVLILSSYVALYLRHYWSSFLIISLAITLPVRLRMLRQAHARKKVRQLPLSM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68062" stop="67772"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCSCFILRLVIWCAYIIIICGPLFTTLLEFLSHYKPCHYPSSASENVTTGSCKKESKTVTFVYVNFLLLLEAPNSGLSERNTFCTKVLSNCSNTVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="73528" e_stop="73296"/>
            <exon e_start="70309" e_stop="69997"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73528" e_stop="73296" e_length="233"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.921">
            <gDNA_intron_boundary i_start="73295" i_stop="70310" i_length="2986"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70309" e_stop="69997" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73528" stop="73296"/>
              <exon start="70309" stop="69997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596222" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</gDNA_template>
            <first_frame> V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  * :   N  C  T  Q  G  V  A  *  W  S  M  K  *  E  E  N  H  E  V  S  S  S  N  P  S  G  D  K  K  T  W  G  F  L  P  I  C  L  S  L  *  G  K  I  I  W  Y  L  C  W  W  E  I  T  G  A  Q  W  N  N  *  G  T  S  K  Q  A  R  T  P  R  L  F  *  K  E  V  C  W  K  L  L  F  L  F  C  M  *  I  I  *  R  T  P  Q  M  H  Q  Y  L  Q  Y  T  C </first_frame>
            <second_frame>  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : E  I  A  P  K  V  L  P  S  G  Q  *  S  E  K  R  T  M  R  S  Q  V  Q  I  L  A  E  I  K  R  L  G  G  F  F  P  F  A  *  A  F  E  A  K  L  S  G  T  Y  A  G  G  R  *  Q  V  P  N  G  I  I  K  A  Q  A  S  R  L  G  H  H  D  Y  F  K  K  K  Y  A  G  N  C  F  F  C  F  A  C  E  *  F  R  E  R  H  R  C  T  N  I  S  S  T  H   </second_frame>
            <third_frame>   F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  K  L  H  P  R  C  C  L  V  V  N  E  V  R  R  E  P  *  G  L  K  F  K  S  *  R  R  *  K  D  L  G  V  S  S  H  L  P  K  P  L  R  Q  N  Y  L  V  P  M  L  V  G  D  N  R  C  P  M  E  *  L  R  H  K  Q  A  G  S  D  T  T  I  I  L  K  R  S  M  L  E  I  A  F  F  V  L  H  V  N  N  L  E  N  A  T  D  A  P  I  S  P  V  H  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0023N04.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="75473" PGL_stop="77111"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75473" e_stop="75664"/>
            <exon e_start="75952" e_stop="76004"/>
            <exon e_start="76109" e_stop="76218"/>
            <exon e_start="76535" e_stop="76702"/>
            <exon e_start="76774" e_stop="76998"/>
            <exon e_start="77091" e_stop="77111"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.655" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.940" e_score="0.951"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="75473" e_stop="75664" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75665" i_stop="75951" i_length="287"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75952" e_stop="76004" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.655" acc_prob="0.953">
            <gDNA_intron_boundary i_start="76005" i_stop="76108" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76109" e_stop="76218" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.924">
            <gDNA_intron_boundary i_start="76219" i_stop="76534" i_length="316"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="76535" e_stop="76702" e_length="168"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.921">
            <gDNA_intron_boundary i_start="76703" i_stop="76773" i_length="71"/>
          </intron>
          <exon e_serial="5" e_score="0.951">
            <gDNA_exon_boundary e_start="76774" e_stop="76998" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.940">
            <gDNA_intron_boundary i_start="76999" i_stop="77090" i_length="92"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="77091" e_stop="77111" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75473" stop="75664"/>
              <exon start="75952" stop="76004"/>
              <exon start="76109" stop="76218"/>
              <exon start="76535" stop="76702"/>
              <exon start="76774" stop="76998"/>
              <exon start="77091" stop="77111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600903" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAG : GCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATG : TGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTG : GCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAG : ATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGGTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCAGGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGAGATATCTTTCTTGTGAATTCTAAAGACGTTATGAGGCCCAATCTCTCTGTTCGAGAGGGTATAG : AAATTGTAATCTCCGGGGGCA</gDNA_template>
            <first_frame> I  F  I  F  G  E  E  E  G  G  R  S  I  M  A  T  P  R  A  D  R  E  L  E  L  L  I  P  M  G  G  V  E  N  I  N  A  S  H  S  K  S  S  S  P  S  H  S  P  K  I  P  S  S  S  R  S  H  H  S  S  G  K  E  :  A  F  S  K  V  I  R  S  W  T  W  K  K  F  I  S  G  C :   V  I  L  F  P  I  A  I  T  F  Y  I  T  W  W  F  I  H  F  V  D  A  F  F  S  P  I  Y  N  H  L  G  I  N  V  F   : G  L  G  F  V  T  S  M  T  F  I  F  F  V  G  V  F  M  S  S  W  L  G  A  S  L  L  S  L  G  E  W  F  I  K  K  M  P  L  M  S  Y  I  Y  S  A  S  K  Q  I  S  S  A  I  S  P   : D  K  T  S  H  A  F  K  E  V  A  I  I  R  H  P  R  L  G  E  Y  A  F  G  F  I  T  S  T  V  I  L  H  K  H  S  G  A  E  E  L  C  C  V  Y  V  P  T  N  H  L  Y  L  G  D  I  F  L  V  N  S  K  D  V  M  R  P  N  L  S  V  R  E  G  I   : E  I  V  I  S  G  G  </first_frame>
            <second_frame>  Y  S  F  L  G  K  K  K  E  G  D  L  *  W  R  R  Q  E  Q  I  G  N  *  S  F  S  Y  Q  W  E  A  L  R  I  L  M  L  V  T  P  N  L  L  L  L  L  I  P  L  R  F  H  L  L  L  G  L  I  T  L  L  A  K  R :   H  L  A  K  L  F  V  A  G  L  G  K  S  S  S  A  D   : V  S  S  Y  F  P  *  P  *  L  F  T  S  P  G  G  S  F  I  L  W  M  P  S  F  P  R  S  I  T  T  L  E  S  M  Y  L  :  A  L  D  L  L  P  P  *  L  S  S  S  S  L  G  C  S  C  P  H  G  *  V  H  L  F  L  V  *  E  S  G  S  *  K  K  C  P  S  *  A  T  S  T  L  P  P  S  K  L  A  Q  Q  F  H  Q  :  I  K  L  H  M  P  S  K  K  W  P  *  *  G  I  R  V  L  V  N  M  H  L  V  L  S  L  Q  Q  S  Y  F  T  S  I  Q  V  Q  R  N  S  A  V  F  M  C  Q  L  I  T  S  I  L  E  I  S  F  L  *  I  L  K  T  L  *  G  P  I  S  L  F  E  R  V  *  :  K  L  *  S  P  G  A </second_frame>
            <third_frame>   I  H  F  W  G  R  R  R  R  E  I  Y  N  G  D  A  K  S  R  *  G  I  R  A  S  H  T  N  G  R  R  *  E  Y  *  C  *  S  L  Q  I  F  F  S  F  S  F  P  *  D  S  I  F  F  *  V  S  S  L  F  W  Q  R   : G  I  *  Q  S  Y  S  *  L  D  L  E  K  V  H  Q  R  M  :  C  H  L  I  S  H  S  H  N  F  L  H  H  L  V  V  H  S  F  C  G  C  L  L  F  P  D  L  *  P  P  W  N  Q  C  I  W :   P  W  I  C  Y  L  H  D  F  H  L  L  R  W  G  V  H  V  L  M  V  R  C  I  S  S  *  F  R  R  V  V  H  K  K  N  A  P  H  E  L  H  L  L  C  L  Q  A  N  *  L  S  N  F  T  R :   *  N  F  T  C  L  Q  R  S  G  H  N  K  A  S  A  S  W  *  I  C  I  W  F  Y  H  F  N  S  H  T  S  Q  A  F  R  C  R  G  T  L  L  C  L  C  A  N  *  S  P  L  S  W  R  Y  L  S  C  E  F  *  R  R  Y  E  A  Q  S  L  C  S  R  G  Y  R :   N  C  N  L  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75473" stop="75664"/>
                    <exon start="75952" stop="76004"/>
                    <exon start="76109" stop="76218"/>
                    <exon start="76535" stop="76702"/>
                    <exon start="76774" stop="76998"/>
                    <exon start="77091" stop="77110"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFIFGEEEGGRSIMATPRADRELELLIPMGGVENINASHSKSSSPSHSPKIPSSSRSHHSSGKEAFSKVIRSWTWKKFISGCVILFPIAITFYITWWFIHFVDAFFSPIYNHLGINVFGLGFVTSMTFIFFVGVFMSSWLGASLLSLGEWFIKKMPLMSYIYSASKQISSAISPDKTSHAFKEVAIIRHPRLGEYAFGFITSTVILHKHSGAEELCCVYVPTNHLYLGDIFLVNSKDVMRPNLSVREGIEIVISGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="77626" PGL_stop="77155"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77626" e_stop="77155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="77626" e_stop="77155" e_length="472"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77626" stop="77155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGTTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</gDNA_template>
            <first_frame> L  A  R  K  N  S  L  V  S  *  T  Y  K  *  P  I  P  I  L  D  Y  L  H  A  P  L  *  H  N  I  V  L  V  L  I  Q  K  E  I  Y  A  S  C  *  E  E  R  G  K  N  I  S  E  A  A  S  L  F  Q  S  V  *  V  *  V  E  L  S  F  *  L  E  L  I  *  Q  N  L  V  C  S  I  L  L  Y  *  N  Q  I  N  V  P  K  N  H  K  D  K  R  R  K  I  G  D  I  F  L  *  E  P  L  S  M  H  Y  *  P  S  F  L  R  L  Y  V  Q  F  T  R  R  A  V  S  F  P  W  F  L  V  *  M  V  E  *  S  N  L  W  Y  C  K  F  S  N  S  R  R  *  </first_frame>
            <second_frame>  W  Q  G  K  I  P  W  F  H  E  L  T  N  D  P  Y  Q  S  *  I  I  Y  M  L  L  Y  N  I  I  L  Y  L  F  S  S  K  K  K  Y  M  Q  V  V  E  K  R  G  E  K  I  Y  Q  R  Q  P  P  C  S  N  L  Y  R  Y  E  L  S  S  V  S  N  L  S  S  F  D  K  I  L  F  V  Q  Y  C  C  T  K  I  R  *  M  Y  Q  K  I  T  K  I  R  G  E  R  L  E  I  F  S  C  K  S  L  Y  P  C  I  I  N  P  H  F  Y  V  C  M  S  S  L  L  V  E  Q  Y  L  F  L  G  F  L  F  K  W  L  S  N  Q  T  C  G  T  A  N  F  P  T  L  G  D  K </second_frame>
            <third_frame>   G  K  E  K  F  L  G  F  M  N  L  Q  M  T  H  T  N  L  R  L  F  T  C  S  S  I  T  *  Y  C  T  C  S  H  P  K  R  N  I  C  K  L  L  R  R  E  G  K  K  Y  I  R  G  S  L  L  V  P  I  C  I  G  M  S  *  A  Q  F  L  T  *  A  H  L  T  K  S  C  L  F  N  I  V  V  L  K  S  D  K  C  T  K  K  S  Q  R  *  E  E  K  D  W  R  Y  F  L  V  R  A  S  I  H  A  L  L  T  L  I  S  T  S  V  C  P  V  Y  S  S  S  S  I  F  S  L  V  S  C  L  N  G  *  V  I  K  L  V  V  L  Q  I  F  Q  L  S  E  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77568" stop="77359"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIYMLLYNIILYLFSSKKKYMQVVEKRGEKIYQRQPPCSNLYRYELSSVSNLSSFDKILFVQYCCTKIR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77358" stop="77155"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MYQKITKIRGERLEIFSCKSLYPCIINPHFYVCMSSLLVEQYLFLGFLFKWLSNQTCGTANFPTLGDK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="88807" PGL_stop="87602"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88807" e_stop="88723"/>
            <exon e_start="88625" e_stop="88575"/>
            <exon e_start="88488" e_stop="88267"/>
            <exon e_start="88071" e_stop="87978"/>
            <exon e_start="87878" e_stop="87738"/>
            <exon e_start="87655" e_stop="87602"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.979" e_score="0.953"/>
          <exon-intron don_prob="0.944" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.413" e_score="0.995"/>
          <exon-intron don_prob="0.843" acc_prob="0.987" e_score="0.989"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.943"/>
          <exon-only e_score="0.778"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="88807" e_stop="88723" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.979">
            <gDNA_intron_boundary i_start="88722" i_stop="88626" i_length="97"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88625" e_stop="88575" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.944" acc_prob="0.916">
            <gDNA_intron_boundary i_start="88574" i_stop="88489" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="88488" e_stop="88267" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.413">
            <gDNA_intron_boundary i_start="88266" i_stop="88072" i_length="195"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="88071" e_stop="87978" e_length="94"/>
          </exon>
          <intron i_serial="4" don_prob="0.843" acc_prob="0.987">
            <gDNA_intron_boundary i_start="87977" i_stop="87879" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="0.943">
            <gDNA_exon_boundary e_start="87878" e_stop="87738" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="87737" i_stop="87656" i_length="82"/>
          </intron>
          <exon e_serial="6" e_score="0.778">
            <gDNA_exon_boundary e_start="87655" e_stop="87602" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88807" stop="88723"/>
              <exon start="88625" stop="88575"/>
              <exon start="88488" stop="88267"/>
              <exon start="88071" stop="87978"/>
              <exon start="87878" stop="87738"/>
              <exon start="87655" stop="87602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599720" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAG : ACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAG : GTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAGTATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAG : GTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACG : CTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAG : GTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGG</gDNA_template>
            <first_frame> S  H  A  S  Q  R  L  L  E  R  I  G  T  S  N  V  C  L  G  G  F  P  C  Y  S  S  C  Q   : D  L  H  R  D  M  L  H  R  V  L  D  F  K  F  I  A   : G  T  C  C  C  F  G  F  V  V  *  S  S  M  S  V  Q  G  D  K  G  D  C  I  K  R  K  G  D  N  K  L  E  A  T  S  T  L  L  L  L  L  L  W  H  S  C  W  Y  C  W  R  I  A  W  S  R  R  W  L  H  P  W  T  T  V  S  R  T  W  N  S  S  S   : G  S  K  C  N  I  N  L  F  N  D  F  L  I  L  Y  V  S  C  A  I  L  P  I  E  A  F  P  C  P  I  R :   Y  L  F  R  F  N  S  N  N  C  C  S  S  W  S  T  R  Y  K  K  S  N  C  T  A  W  K  S  L  Y  N  H  I  H  T  G  H  D  N  I  Y  Q  C  N  Q  L  R :   W  C  G  D  S  K  Y  D  R  E  A  E  E  Q  *  L  Y   </first_frame>
            <second_frame>  P  M  L  R  N  V  Y  W  K  E  L  G  L  L  M  F  V  W  V  A  F  L  A  I  Q  V  V  K  :  T  Y  T  V  T  C  S  I  G  Y  W  I  L  N  L  L  Q  :  V  P  V  A  V  S  V  S  L  Y  E  A  V  C  L  Y  K  G  T  R  V  I  A  S  K  G  K  E  I  T  N  W  K  P  H  L  L  F  F  Y  C  C  C  G  I  V  A  G  I  V  G  G  L  L  G  L  G  G  G  F  I  L  G  P  L  F  L  E  L  G  I  P  P  Q  :  V  A  S  A  T  S  T  F  S  M  T  F  S  S  S  M  S  V  V  Q  Y  Y  L  L  K  R  F  P  V  P  Y   : A  T  Y  F  V  S  I  A  T  I  A  A  V  V  G  Q  H  V  I  R  R  V  I  A  L  L  G  R  A  S  I  I  I  F  I  L  A  M  T  I  F  T  S  A  I  S  L   : G  G  V  G  I  A  N  M  I  E  K  L  K  N  N  D  Y  M  </second_frame>
            <third_frame>   P  C  F  A  T  F  T  G  K  N  W  D  F  *  C  L  F  G  W  L  S  L  L  F  K  L  S  R :   P  T  P  *  H  A  P  S  G  T  G  F  *  I  Y  C  R :   Y  L  L  L  F  R  F  R  C  M  K  Q  Y  V  C  T  R  G  Q  G  *  L  H  Q  K  E  R  R  *  Q  T  G  S  H  I  Y  S  S  F  T  V  V  V  A  *  L  L  V  L  L  A  D  C  L  V  S  E  V  A  S  S  L  D  H  C  F  *  N  L  E  F  L  L  R :   *  Q  V  Q  H  Q  P  F  Q  *  L  S  H  P  L  C  Q  L  C  N  I  T  Y  *  S  V  S  L  S  H  T  :  L  L  I  S  F  Q  *  Q  Q  L  L  Q  *  L  V  N  T  L  *  E  E  *  L  H  C  L  E  E  P  L  *  S  Y  S  Y  W  P  *  Q  Y  L  P  V  Q  S  A  *  :  V  V  W  G  *  Q  I  *  *  R  S  *  R  T  M  T  I  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88806" stop="88723"/>
                    <exon start="88625" stop="88575"/>
                    <exon start="88488" stop="88267"/>
                    <exon start="88071" stop="87978"/>
                    <exon start="87878" stop="87738"/>
                    <exon start="87655" stop="87603"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMLRNVYWKELGLLMFVWVAFLAIQVVKTYTVTCSIGYWILNLLQVPVAVSVSLYEAVCLYKGTRVIASKGKEITNWKPHLLFFYCCCGIVAGIVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMTFSSSMSVVQYYLLKRFPVPYATYFVSIATIAAVVGQHVIRRVIALLGRASIIIFILAMTIFTSAISLGGVGIANMIEKLKNNDYM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="90474" PGL_stop="89502"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90474" e_stop="90055"/>
            <exon e_start="89868" e_stop="89709"/>
            <exon e_start="89624" e_stop="89502"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90474" e_stop="90055" e_length="420"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.976">
            <gDNA_intron_boundary i_start="90054" i_stop="89869" i_length="186"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89868" e_stop="89709" e_length="160"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.998">
            <gDNA_intron_boundary i_start="89708" i_stop="89625" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89624" e_stop="89502" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90474" stop="90055"/>
              <exon start="89868" stop="89709"/>
              <exon start="89624" stop="89502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCG : GAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGT : GCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</gDNA_template>
            <first_frame> E  R  I  F  K  H  T  N  *  K  F  V  S  A  L  L  I  P  L  R  F  F  K  V  E  Y  I  *  K  *  P  I  Y  Y  L  R  G  S  Y  F  Y  I  Y  F  L  I  K  A  I  *  V  E  L  F  M  M  A  N  E  E  I  K  K  R  M  K  A  F  F  V  S  A  V  W  I  L  C  W  G  L  F  I  I  S  E  A  G  I  N  A  E  R  L  T  L  K  D  K  L  E  P  A  A  T  Y  N  I  S  Y  V  E  N  N  E  M  R  P  Q  T  F  A  V  R  L  V  H  F  L  W  S  G  K  S  S  Y  E  H  V  W  P  :  E  M  E  F  G  W  R  V  I  V  G  S  I  V  G  F  F  G  A  A  L  G  S  V  G  G  V  G  G  G  G  I  F  V  P  M  L  T  L  I  I  G  F  D  P  K  S  S  T  A  I  S  K   : C  M  I  M  G  A  A  G  S  T  V  Y  Y  N  M  R  L  R  H  P  T  L  D  M  P  I  I  D  Y  D  L  A  L  L  L  Q  P  M  L  M  L  </first_frame>
            <second_frame>  K  G  Y  S  S  I  Q  I  K  S  L  F  L  L  F  *  F  P  S  G  S  S  K  W  N  I  Y  R  S  S  Q  F  I  T  S  E  E  A  T  S  I  Y  I  S  *  L  R  L  F  E  L  N  F  L  *  W  L  M  K  R  *  K  R  E  *  R  R  F  S  Y  Q  Q  Y  G  Y  Y  A  G  D  Y  S  *  *  A  K  L  G  L  M  Q  K  G  L  L  *  R  I  N  *  S  Q  L  L  L  I  T  L  V  M  *  R  I  M  R  *  D  H  K  P  L  Q  *  G  L  C  I  F  C  G  V  E  S  P  L  M  S  T  F  G  R :   R  W  S  L  D  G  E  *  L  L  D  P  L  W  D  S  L  V  L  L  W  E  A  L  E  G  L  A  A  V  E  F  L  F  Q  C  *  L  L  L  L  A  L  I  Q  N  H  L  Q  L  Y  P  S  :  A  *  *  W  E  Q  L  D  Q  Q  C  T  T  T  *  G  *  G  T  Q  L  *  I  C  L  *  L  T  M  I  W  L  C  S  Y  N  L  C  S  C  L </second_frame>
            <third_frame>   K  D  I  Q  A  Y  K  L  K  V  C  F  C  S  F  N  S  P  Q  V  L  Q  S  G  I  Y  I  E  V  A  N  L  L  P  Q  R  K  L  L  L  Y  I  F  L  N  *  G  Y  L  S  *  T  F  Y  D  G  *  *  R  D  K  K  E  N  E  G  V  F  R  I  S  S  M  D  T  M  L  G  I  I  H  N  K  R  S  W  D  *  C  R  K  A  Y  S  E  G  *  I  R  A  S  C  Y  L  *  H  *  L  C  R  E  *  *  D  E  T  T  N  L  C  S  K  A  C  A  F  S  V  E  W  K  V  L  L  *  A  R  L  A   : G  D  G  V  W  M  E  S  N  C  W  I  H  C  G  I  L  W  C  C  F  G  K  R  W  R  G  W  R  R  W  N  F  C  S  N  A  N  S  Y  Y  W  L  *  S  K  I  I  Y  S  Y  I  Q  V :   H  D  N  G  S  S  W  I  N  S  V  L  Q  H  E  A  E  A  P  N  S  R  Y  A  Y  N  *  L  *  F  G  F  A  L  T  T  Y  A  H  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90324" stop="90055"/>
                    <exon start="89868" stop="89709"/>
                    <exon start="89624" stop="89503"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VELFMMANEEIKKRMKAFFVSAVWILCWGLFIISEAGINAERLTLKDKLEPAATYNISYVENNEMRPQTFAVRLVHFLWSGKSSYEHVWPEMEFGWRVIVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTAISKCMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLLQPMLML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="94660" PGL_stop="94791"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94660" e_stop="94791"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="94660" e_stop="94791" e_length="132"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94660" stop="94791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602892" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACATAACAAACACATTACCGCGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</gDNA_template>
            <first_frame> H  I  T  N  T  L  P  R  T  H  P  Q  *  I  R  I  *  Q  V  T  L  E  L  S  K  *  F  T  K  Q  F  Q  K  K  I  Q  N  S  K  H  G  L  M  R </first_frame>
            <second_frame>  T  *  Q  T  H  Y  R  A  H  I  P  N  K  F  A  F  N  K  S  H  *  N  S  A  S  N  L  P  N  N  S  K  R  R  Y  K  I  Q  N  M  G  *  C   </second_frame>
            <third_frame>   H  N  K  H  I  T  A  H  T  S  P  I  N  S  H  L  T  S  H  I  R  T  Q  Q  V  I  Y  Q  T  I  P  K  E  D  T  K  F  K  T  W  A  D  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0023N04.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="96437" PGL_stop="95057"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96437" e_stop="96355"/>
            <exon e_start="95910" e_stop="95842"/>
            <exon e_start="95657" e_stop="95485"/>
            <exon e_start="95349" e_stop="95057"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.993" e_score="0.940"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="0.986"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="96437" e_stop="96355" e_length="83"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.993">
            <gDNA_intron_boundary i_start="96354" i_stop="95911" i_length="444"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="95910" e_stop="95842" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="95841" i_stop="95658" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95657" e_stop="95485" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95484" i_stop="95350" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95349" e_stop="95057" e_length="293"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96437" stop="96355"/>
              <exon start="95910" stop="95842"/>
              <exon start="95657" stop="95485"/>
              <exon start="95349" stop="95057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582681" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG : AGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC : GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</gDNA_template>
            <first_frame> G  R  T  V  P  N  W  R  P  R  R  L  G  G  G  L  G  T  T  R  V  G  N  E  D  A  T  R :   E  V  V  Q  P  G  R  A  A  S  R  S  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E   : R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R </first_frame>
            <second_frame>  V  E  Q  S  P  I  G  V  P  A  D  L  V  V  D  L  E  Q  Q  E  L  E  M  K  M  L  L   : E  R  W  F  S  L  E  G  Q  H  L  A  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  :  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S   </second_frame>
            <third_frame>   *  N  S  P  Q  L  A  S  P  Q  T  W  W  W  T  W  N  N  K  S  W  K  *  R  C  Y  *  :  R  G  G  S  A  W  K  G  S  I  S  L  *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T :   *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96437" stop="96355"/>
                    <exon start="95910" stop="95842"/>
                    <exon start="95657" stop="95485"/>
                    <exon start="95349" stop="95057"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRTVPNWRPRRLGGGLGTTRVGNEDATREVVQPGRAASRSEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKR</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96436" stop="96355"/>
                    <exon start="95910" stop="95842"/>
                    <exon start="95657" stop="95485"/>
                    <exon start="95349" stop="95059"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEQSPIGVPADLVVDLEQQELEMKMLLERWFSLEGQHLALRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="100482" PGL_stop="96477"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100482" e_stop="100312"/>
            <exon e_start="99535" e_stop="99421"/>
            <exon e_start="99334" e_stop="99255"/>
            <exon e_start="98535" e_stop="98460"/>
            <exon e_start="98380" e_stop="98316"/>
            <exon e_start="98201" e_stop="98139"/>
            <exon e_start="96658" e_stop="96577"/>
            <exon e_start="96502" e_stop="96477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.988"/>
          <exon-intron don_prob="0.768" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.606" acc_prob="0.998" e_score="0.934"/>
          <exon-intron don_prob="0.950" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.943" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="100482" e_stop="100312" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="100311" i_stop="99536" i_length="776"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="99535" e_stop="99421" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="0.768" acc_prob="0.985">
            <gDNA_intron_boundary i_start="99420" i_stop="99335" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="99334" e_stop="99255" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="99254" i_stop="98536" i_length="719"/>
          </intron>
          <exon e_serial="4" e_score="0.934">
            <gDNA_exon_boundary e_start="98535" e_stop="98460" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.606" acc_prob="0.998">
            <gDNA_intron_boundary i_start="98459" i_stop="98381" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98380" e_stop="98316" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.950" acc_prob="0.996">
            <gDNA_intron_boundary i_start="98315" i_stop="98202" i_length="114"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98201" e_stop="98139" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.866" acc_prob="0.962">
            <gDNA_intron_boundary i_start="98138" i_stop="96659" i_length="1480"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="96658" e_stop="96577" e_length="82"/>
          </exon>
          <intron i_serial="7" don_prob="0.719" acc_prob="0.943">
            <gDNA_intron_boundary i_start="96576" i_stop="96503" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="96502" e_stop="96477" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100482" stop="100312"/>
              <exon start="99535" stop="99421"/>
              <exon start="99334" stop="99255"/>
              <exon start="98535" stop="98460"/>
              <exon start="98380" stop="98316"/>
              <exon start="98201" stop="98139"/>
              <exon start="96658" stop="96577"/>
              <exon start="96502" stop="96477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574992" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG : ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG : GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG : ATGGAAAGAGGAGCTAGGATCCACCAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT : ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT : AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG : GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAG : CTGCGTATAAACAAGCTGATGGAAAG</gDNA_template>
            <first_frame> S  N  R  P  I  N  V  T  P  L  L  V  A  A  I  R  I  *  Q  K  P  *  S  A  S  M  G  D  F  N  D  A  F  M  R  N  N  P  N  V  Q  A  R  A  K  A  Q  N  R  A  N  V  M  Q  L  K  L  :  I  G  Q  S  H  P  T  G  L  T  A  N  L  L  K  L  F  E  P  R  P  P  L  E  Y  K  P  P  P  E  K  R  K  C  P  S  Y  T   : G  M  A  Q  F  V  S  N  F  A  Q  P  G  D  P  E  Y  A  P  P  I  P  E  V  E  T  P  :  M  E  R  G  A  R  I  H  Q  I  R  L  E  E  G  A  K  K  A  A  E  E  L  E  K   : Y  D  P  S  S  D  P  N  A  T  G  D  P  Y  K  T  L  F  V  A  R  L  :  N  Y  E  T  T  E  S  R  V  K  R  E  F  E  A  Y  G  P  I  K  R  :  V  R  L  V  M  D  K  T  N  N  K  P  R  G  Y  A  F  I  E  Y  V  H  T  R  D  M  K   : A  A  Y  K  Q  A  D  G  K </first_frame>
            <second_frame>  P  I  V  R  L  T  *  L  H  F  L  W  R  R  F  A  S  S  K  N  P  S  R  L  Q  W  E  T  S  T  M  P  S  C  G  T  T  L  T  F  R  P  V  Q  R  P  R  I  A  L  M  S  C  N  S  S  * :   L  V  K  V  I  Q  L  G  *  L  L  I  F  *  S  C  L  S  P  D  H  L  W  S  T  N  H  P  L  R  R  E  N  A  L  H  I  L  :  G  W  H  N  L  L  V  T  S  L  N  L  V  I  Q  N  M  L  H  Q  S  L  R  L  K  P  R :   W  K  E  E  L  G  S  T  R  Y  G  W  R  R  V  L  K  R  L  L  R  S  L  K  N  :  M  I  L  A  A  T  Q  M  L  P  G  I  H  T  R  H  Y  L  L  Q  D  L :   I  M  R  Q  Q  K  A  E  S  N  A  N  L  R  L  M  V  Q  S  S  G :   F  A  W  L  W  T  R  Q  T  I  N  P  G  V  M  L  S  L  S  M  C  I  H  G  I  *  K  :  L  R  I  N  K  L  M  E   </second_frame>
            <third_frame>   Q  S  S  D  *  R  N  S  T  S  C  G  G  D  S  H  L  A  K  T  L  V  G  F  N  G  R  L  Q  R  C  L  H  A  E  Q  P  *  R  S  G  P  C  K  G  P  E  S  R  *  C  H  A  T  Q  A   : D  W  S  K  S  S  N  W  V  D  C  *  S  S  E  V  V  *  A  P  T  T  F  G  V  Q  T  T  P  *  E  E  K  M  P  F  I  Y  W :   D  G  T  I  C  *  *  L  R  S  T  W  *  S  R  I  C  S  T  N  P  *  G  *  N  P   : D  G  K  R  S  *  D  P  P  D  T  A  G  G  G  C  *  K  G  C  *  G  A  *  K  I :   *  S  *  Q  R  P  K  C  Y  R  G  S  I  Q  D  T  I  C  C  K  T   : *  L  *  D  N  R  K  Q  S  Q  T  R  I  *  G  L  W  S  N  Q  A   : G  S  L  G  Y  G  Q  D  K  Q  *  T  Q  G  L  C  F  H  *  V  C  A  Y  T  G  Y  E  S :   C  V  *  T  S  *  W  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100416" stop="100312"/>
                    <exon start="99535" stop="99421"/>
                    <exon start="99334" stop="99255"/>
                    <exon start="98535" stop="98460"/>
                    <exon start="98380" stop="98316"/>
                    <exon start="98201" stop="98139"/>
                    <exon start="96658" stop="96577"/>
                    <exon start="96502" stop="96477"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SASMGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPSYTGMAQFVSNFAQPGDPEYAPPIPEVETPMERGARIHQIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFEAYGPIKRVRLVMDKTNNKPRGYAFIEYVHTRDMKAAYKQADGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="105117" PGL_stop="104530"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105117" e_stop="105106"/>
            <exon e_start="104999" e_stop="104530"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105117" e_stop="105106" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="105105" i_stop="105000" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="104999" e_stop="104530" e_length="470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105117" stop="105106"/>
              <exon start="104999" stop="104530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600046" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACATCTTTCAG : GAGCATTGAAGATTTGTTGAGACGAGCAGCTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGAGACTACTTCCTCTTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCACCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTACCACGTCACTCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTATCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</gDNA_template>
            <first_frame> Y  I  F  Q  :  E  H  *  R  F  V  E  T  S  S  *  R  E  R  L  N  F  W  A  A  G  N  F  T  V  V  E  I  C  N  H  L  L  V  L  L  R  P  T  K  M  R  L  L  P  L  L  L  L  I  P  P  R  L  P  H  H  Q  L  R  L  P  P  H  P  Q  N  L  L  H  L  *  I  L  R  H  R  Q  R  N  L  L  L  R  H  H  H  H  P  Q  L  L  N  H  H  H  L  R  Q  I  P  L  P  R  H  S  M  L  L  R  R  L  L  L  P  H  P  N  L  I  L  H  H  Q  F  P  Q  D  H  L  H  Y  L  L  E  N  Y  L  L  L  H  L  Q  K  N  Q  H  L  L  K  N  Q  T  V  H  N   </first_frame>
            <second_frame>  T  S  F  R :   S  I  E  D  L  L  R  R  A  A  N  G  R  G  *  I  S  G  L  P  E  I  S  P  L  L  K  Y  A  I  T  S  *  Y  C  F  V  R  Q  R  *  D  Y  F  L  F  S  F  *  F  L  P  V  S  P  T  T  S  S  A  Y  L  P  T  P  R  I  S  S  T  C  K  F  S  A  T  V  K  G  I  F  S  S  V  I  T  T  T  L  S  F  *  I  T  T  T  S  V  R  F  H  Y  H  V  T  Q  C  S  *  G  V  S  S  Y  L  I  Q  I  *  S  S  T  T  S  F  L  R  I  T  F  I  I  C  W  K  I  I  S  S  S  T  F  R  K  I  S  T  F  *  K  T  R  R  C  T  T  </second_frame>
            <third_frame>   H  L  S   : G  A  L  K  I  C  *  D  E  Q  L  T  G  E  V  E  F  L  G  C  R  K  F  H  R  C  *  N  M  Q  S  P  P  S  T  A  S  S  D  K  D  E  T  T  S  S  S  P  S  N  S  S  P  S  P  P  P  P  A  P  P  T  S  P  P  P  E  S  P  P  P  V  N  S  P  P  P  S  K  E  S  S  P  P  S  S  P  P  P  S  A  S  E  S  P  P  P  P  S  D  S  T  T  T  S  L  N  A  P  E  A  S  P  P  T  S  S  K  F  N  P  P  P  P  V  S  S  G  S  P  S  L  S  A  G  K  L  S  P  P  P  P  S  E  K  S  A  P  F  E  K  P  D  G  A  Q  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104919" stop="104530"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMQSPPSTASSDKDETTSSSPSNSSPSPPPPAPPTSPPPESPPPVNSPPPSKESSPPSSPPPSASESPPPPSDSTTTSLNAPEASPPTSSKFNPPPPVSSGSPSLSAGKLSPPPPSEKSAPFEKPDGAQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="105600" PGL_stop="106300"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105600" e_stop="106300"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105600" e_stop="106300" e_length="701"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105600" stop="106300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTCCAAACTGTAAGTATTATCGTCAAAAGAGAACCTGACTATACAATTCCAACAGTTTGCACTTGTTTAGAACCAAAACTGAAAACTAGCAGCAAGAAAGTAAAATGACTGGAGGACAAAAACAAATCATACTACTAGCCCAAATGAAACAATCATCAAGGGCACTACTTCATATTCTCCAGATCCTTGTAACATAACGAGGCAGCTTATGTAGGCTGAGAACCTCTCATCAGTATTCGTCCCAGACTCCACACTGTTCTGCTCCCTTGGGTTATTCTCCAGCATTGTGTACCATAACAAGGCTGTTTATGTAGGGTAAGAACCTCTTATCAGTATCCACTCGTCCCGGACTCTGCAGTGTCTCAACCTTCTGGTCCCTAAGGTGATAAAAGTATATTGTTGTGTCCGTGTGGATCACCACAGTATCACTGACAGTACAAGGTAGTACCTCACAACACTTCTCATTGGGTATTCCAAGCACTTGAGTACGAGGCTTCTTGCTACCAAGATTTACACTGACACTGCGCTTCAGGCCCATGTCTACACCTCCATAGATGTCTATTATGAAAACACTTCCACAGTCATTATAAGCAGTAACATAGCAAACCTCATCTCCTATCTGCGTCAAGGCACCACGTTGTCCAGATTGAAGAACAGGTAAATGTAGAACTGCTGGAATCTCATTTTTCACATCGAATG</gDNA_template>
            <first_frame> S  S  K  L  *  V  L  S  S  K  E  N  L  T  I  Q  F  Q  Q  F  A  L  V  *  N  Q  N  *  K  L  A  A  R  K  *  N  D  W  R  T  K  T  N  H  T  T  S  P  N  E  T  I  I  K  G  T  T  S  Y  S  P  D  P  C  N  I  T  R  Q  L  M  *  A  E  N  L  S  S  V  F  V  P  D  S  T  L  F  C  S  L  G  L  F  S  S  I  V  Y  H  N  K  A  V  Y  V  G  *  E  P  L  I  S  I  H  S  S  R  T  L  Q  C  L  N  L  L  V  P  K  V  I  K  V  Y  C  C  V  R  V  D  H  H  S  I  T  D  S  T  R  *  Y  L  T  T  L  L  I  G  Y  S  K  H  L  S  T  R  L  L  A  T  K  I  Y  T  D  T  A  L  Q  A  H  V  Y  T  S  I  D  V  Y  Y  E  N  T  S  T  V  I  I  S  S  N  I  A  N  L  I  S  Y  L  R  Q  G  T  T  L  S  R  L  K  N  R  *  M  *  N  C  W  N  L  I  F  H  I  E   </first_frame>
            <second_frame>  V  P  N  C  K  Y  Y  R  Q  K  R  T  *  L  Y  N  S  N  S  L  H  L  F  R  T  K  T  E  N  *  Q  Q  E  S  K  M  T  G  G  Q  K  Q  I  I  L  L  A  Q  M  K  Q  S  S  R  A  L  L  H  I  L  Q  I  L  V  T  *  R  G  S  L  C  R  L  R  T  S  H  Q  Y  S  S  Q  T  P  H  C  S  A  P  L  G  Y  S  P  A  L  C  T  I  T  R  L  F  M  *  G  K  N  L  L  S  V  S  T  R  P  G  L  C  S  V  S  T  F  W  S  L  R  *  *  K  Y  I  V  V  S  V  W  I  T  T  V  S  L  T  V  Q  G  S  T  S  Q  H  F  S  L  G  I  P  S  T  *  V  R  G  F  L  L  P  R  F  T  L  T  L  R  F  R  P  M  S  T  P  P  *  M  S  I  M  K  T  L  P  Q  S  L  *  A  V  T  *  Q  T  S  S  P  I  C  V  K  A  P  R  C  P  D  *  R  T  G  K  C  R  T  A  G  I  S  F  F  T  S  N  </second_frame>
            <third_frame>   F  Q  T  V  S  I  I  V  K  R  E  P  D  Y  T  I  P  T  V  C  T  C  L  E  P  K  L  K  T  S  S  K  K  V  K  *  L  E  D  K  N  K  S  Y  Y  *  P  K  *  N  N  H  Q  G  H  Y  F  I  F  S  R  S  L  *  H  N  E  A  A  Y  V  G  *  E  P  L  I  S  I  R  P  R  L  H  T  V  L  L  P  W  V  I  L  Q  H  C  V  P  *  Q  G  C  L  C  R  V  R  T  S  Y  Q  Y  P  L  V  P  D  S  A  V  S  Q  P  S  G  P  *  G  D  K  S  I  L  L  C  P  C  G  S  P  Q  Y  H  *  Q  Y  K  V  V  P  H  N  T  S  H  W  V  F  Q  A  L  E  Y  E  A  S  C  Y  Q  D  L  H  *  H  C  A  S  G  P  C  L  H  L  H  R  C  L  L  *  K  H  F  H  S  H  Y  K  Q  *  H  S  K  P  H  L  L  S  A  S  R  H  H  V  V  Q  I  E  E  Q  V  N  V  E  L  L  E  S  H  F  S  H  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106047" stop="106262"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLTTLLIGYSKHLSTRLLATKIYTDTALQAHVYTSIDVYYENTSTVIISSNIANLISYLRQGTTLSRLKNR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="108469" PGL_stop="106310"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108469" e_stop="108376"/>
            <exon e_start="108034" e_stop="107984"/>
            <exon e_start="107892" e_stop="107775"/>
            <exon e_start="107024" e_stop="106310"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.990" e_score="0.968"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="108469" e_stop="108376" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.990">
            <gDNA_intron_boundary i_start="108375" i_stop="108035" i_length="341"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108034" e_stop="107984" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="107983" i_stop="107893" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107892" e_stop="107775" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="107774" i_stop="107025" i_length="750"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107024" e_stop="106310" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108469" stop="108376"/>
              <exon start="108034" stop="107984"/>
              <exon start="107892" stop="107775"/>
              <exon start="107024" stop="106310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565261" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGCGTCGTCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT : TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG : AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG : TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</gDNA_template>
            <first_frame> S  R  R  R  *  G  F  P  A  I  L  C  H  S  F  L  V  F  R  R  L  Y  S  P  E  F  *  R  I  A  L   : L  Q  *  N  F  L  K  P  K  L  S  S  R  A  L  L  I   : E  K  W  H  V  L  G  L  T  C  *  M  M  N  L  W  R  R  T  C  I  L  T  P  L  S  F  T  L  L  L  N  L  R  V  V  G  L  T  R :   *  Q  S  L  T  *  E  L  L  L  I  R  W  R  K  G  T  M  V  L  N  I  L  S  K  S  *  *  E  *  T  *  R  S  K  M  *  R  R  D  I  Y  C  L  S  S  P  L  N  H  *  *  S  F  G  Q  S  P  K  N  G  I  S  G  *  L  V  H  Y  L  R  T  I  K  V  Q  H  F  R  S  F  Q  A  T  F  I  K  D  W  I  M  *  M  I  L  L  Y  F  C  L  C  I  V  L  Q  L  E  S  R  V  L  H  F  V  S  C  L  *  R  L  K  Y  *  V  L  A  A  G  C  S  F  V  K  G  R  T  A  I  M  F  A  I  L  Q  P  K  T  G  K  S  F  L  L  L  N  I  T  T  D  L  I  L  L  L  L  L  H  L  I  L  S  S  I  L  N  H  F  I  V  W  S  L  Q  S  L  F  L  I  I  Q  L  Y  A  L  R  F  T  V  L  N  Q  I  H  G  G  A  L  L  Q  T  V  *  S  W  K  I  Q  D  L  Q  V  E  D  I  I  *  R  G  W  L  T  G  G  I  H  H  R  M </first_frame>
            <second_frame>  R  V  V  V  R  V  F  R  R  F  F  A  I  L  S  W  F  S  G  D  F  T  H  Q  N  F  S  A  L  H  F  :  Y  S  E  I  S  *  N  P  S  Y  H  Q  G  L  C  *  *  :  K  N  G  M  F  W  D  *  H  A  E  *  *  I  F  G  G  G  H  V  F  *  L  L  *  V  L  R  C  C  *  T  S  G  W  W  D  *  L   : V  S  R  V  *  L  E  N  C  C  L  *  G  G  G  R  E  Q  W  F  *  I  S  C  R  N  H  N  E  S  E  H  D  D  Q  R  C  S  E  E  T  Y  T  A  F  P  P  R  *  I  T  D  E  A  S  G  S  L  Q  R  M  E  S  V  D  S  *  S  I  T  C  V  Q  S  K  F  N  I  S  E  A  F  R  L  L  L  S  K  T  G  *  C  R  *  S  S  Y  T  F  V  S  A  S  F  C  N  W  S  P  E  S  F  T  S  F  L  A  C  E  G  *  S  T  K  F  *  Q  R  V  A  P  L  S  R  E  G  Q  L  L  C  L  Q  S  C  N  Q  R  L  E  K  A  S  S  S  S  I  L  P  R  I  *  S  C  C  C  S  C  I  *  S  S  V  Q  Y  *  I  I  L  S  C  G  R  C  S  P  C  S  *  *  S  S  C  M  L  *  D  L  L  F  *  I  R  F  M  E  V  L  S  F  R  L  S  R  A  G  K  Y  K  T  C  R  W  R  I  L  Y  E  G  G  G  L  L  E  E  Y  I  I  E   </second_frame>
            <third_frame>   A  S  S  L  G  F  S  G  D  S  L  P  F  F  L  G  F  P  A  T  L  L  T  R  I  L  A  H  C  T  F :   T  V  K  F  L  E  T  Q  V  I  I  K  G  S  A  D  R :   K  M  A  C  S  G  I  D  M  L  N  D  E  S  L  E  E  D  M  Y  S  D  S  S  E  F  Y  V  A  V  K  P  Q  G  G  G  I  D  S  :  L  A  E  F  D  L  R  T  A  A  Y  K  V  E  E  G  N  N  G  S  K  Y  P  V  E  I  I  M  R  V  N  M  T  I  K  D  V  A  K  R  H  I  L  P  F  L  P  A  K  S  L  M  K  L  R  A  V  S  K  E  W  N  Q  W  I  A  S  P  L  L  A  Y  N  Q  S  S  T  F  Q  K  L  S  G  Y  F  Y  Q  R  L  D  N  V  D  D  P  P  I  L  L  S  L  H  R  S  A  I  G  V  P  S  P  S  L  R  F  L  P  V  K  V  K  V  L  S  S  S  S  G  L  L  L  C  Q  G  K  D  S  Y  Y  V  C  N  P  A  T  K  D  W  K  K  L  P  P  P  Q  Y  Y  H  G  S  D  P  A  V  A  L  A  F  D  P  Q  F  N  I  E  S  F  Y  R  V  V  A  A  V  P  V  L  D  N  P  V  V  C  F  E  I  Y  C  S  E  S  D  S  W  R  C  S  P  S  D  C  L  E  L  E  N  T  R  L  A  G  G  G  Y  Y  M  K  G  V  A  Y  W  R  N  T  S  S  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108467" stop="108376"/>
                    <exon start="108034" stop="107984"/>
                    <exon start="107892" stop="107775"/>
                    <exon start="107024" stop="106311"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>975</number_coding_nucleotides>
                  <number_encoded_amino_acids>325</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASSLGFSGDSLPFFLGFPATLLTRILAHCTFTVKFLETQVIIKGSADRKMACSGIDMLNDESLEEDMYSDSSEFYVAVKPQGGGIDSLAEFDLRTAAYKVEEGNNGSKYPVEIIMRVNMTIKDVAKRHILPFLPAKSLMKLRAVSKEWNQWIASPLLAYNQSSTFQKLSGYFYQRLDNVDDPPILLSLHRSAIGVPSPSLRFLPVKVKVLSSSSGLLLCQGKDSYYVCNPATKDWKKLPPPQYYHGSDPAVALAFDPQFNIESFYRVVAAVPVLDNPVVCFEIYCSESDSWRCSPSDCLELENTRLAGGGYYMKGVAYWRNTSSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="113661" PGL_stop="113133"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113661" e_stop="113133"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="113661" e_stop="113133" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113661" stop="113133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589792" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGAACCACACAGTTTTACATGTTGAC</gDNA_template>
            <first_frame> T  K  I  K  C  L  S  W  I  R  S  S  N  C  A  L  I  *  T  I  I  A  Q  L  C  S  R  V  Q  N  Y  M  C  F  S  I  D  R  F  *  Q  G  N  *  I  *  Y  I  L  L  K  R  G  L  L  E  N  C  *  G  D  V  L  W  K  *  N  N  I  S  K  I  R  D  P  C  E  W  R  C  L  L  D  D  K  *  E  Y  S  C  F  *  S  N  K  G  *  D  T  A  P  *  K  L  W  H  S  W  V  L  G  D  F  *  W  K  A  L  *  G  *  C  Q  W  *  Y  N  Q  L  K  R  F  G  *  Y  P  L  K  Y  N  A  N  R  *  P  N  Q  N  V  V  R  E  R  D  C  C  S  *  Q  *  N  C  W  G  W  C  S  K  E  P  H  S  F  T  C  *  </first_frame>
            <second_frame>  P  K  S  N  A  Y  H  G  S  D  P  A  I  V  L  L  F  E  P  S  L  L  N  F  V  A  E  Y  K  I  I  C  A  F  P  S  T  D  F  D  K  A  T  E  F  D  I  Y  Y  S  R  E  G  C  W  K  I  A  E  E  M  C  F  G  S  R  T  I  F  P  K  S  G  I  H  V  N  G  V  V  Y  W  M  T  S  K  N  I  L  A  F  D  L  T  K  G  R  T  Q  L  L  E  S  Y  G  T  R  G  F  L  G  T  F  S  G  K  L  C  K  V  D  V  S  G  D  I  I  S  L  N  V  L  A  N  T  H  S  N  T  M  Q  I  G  S  Q  I  K  M  W  S  E  K  E  I  V  V  L  D  S  E  I  V  G  D  G  A  A  R  N  H  T  V  L  H  V  D </second_frame>
            <third_frame>   Q  N  Q  M  L  I  M  D  Q  I  Q  Q  L  C  S  Y  L  N  H  H  C  S  T  L  *  Q  S  T  K  L  Y  V  L  F  H  R  Q  I  L  T  R  Q  L  N  L  I  Y  I  T  Q  E  R  V  V  G  K  L  L  R  R  C  A  L  E  V  E  Q  Y  F  Q  N  Q  G  S  M  *  M  A  L  F  T  G  *  Q  V  R  I  F  L  L  L  I  *  Q  R  V  G  H  S  S  L  K  A  M  A  L  V  G  S  W  G  L  L  V  E  S  S  V  R  L  M  S  V  V  I  *  S  A  *  T  F  W  L  I  P  T  Q  I  Q  C  K  *  V  A  K  S  K  C  G  Q  R  K  R  L  L  F  L  T  V  K  L  L  G  M  V  Q  Q  G  T  T  Q  F  Y  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113660" stop="113133"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKSNAYHGSDPAIVLLFEPSLLNFVAEYKIICAFPSTDFDKATEFDIYYSREGCWKIAEEMCFGSRTIFPKSGIHVNGVVYWMTSKNILAFDLTKGRTQLLESYGTRGFLGTFSGKLCKVDVSGDIISLNVLANTHSNTMQIGSQIKMWSEKEIVVLDSEIVGDGAARNHTVLHVD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="120181" PGL_stop="116738"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120181" e_stop="119563"/>
            <exon e_start="118165" e_stop="118103"/>
            <exon e_start="118016" e_stop="117858"/>
            <exon e_start="117604" e_stop="116738"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.670" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="120181" e_stop="119563" e_length="619"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.670">
            <gDNA_intron_boundary i_start="119562" i_stop="118166" i_length="1397"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="118165" e_stop="118103" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="118102" i_stop="118017" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="118016" e_stop="117858" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.963">
            <gDNA_intron_boundary i_start="117857" i_stop="117605" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="117604" e_stop="116738" e_length="867"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120181" stop="119563"/>
              <exon start="118165" stop="118107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120115" stop="119965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118130" stop="118103"/>
              <exon start="118016" stop="117858"/>
              <exon start="117604" stop="116738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568633" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAATTCCCCACGCCTAGCTAGTTGAAATCAGAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAG : GTCAACTGAACATTTGGCTTTTTTCGCCTCTTCCACTGGATGCTTATTTTTTGCAACTGAGTG : GAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAG : GAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATCAACACCGAGAGTTGATATAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCAGTTAAACCAGTCGACTCATTAGATATATCTCCTCAGATCAGAGGCAAGGAGGACTCCGACAGCAAAGATAATATTAATACAACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTCAAGCTCCTGCTGAAGGTGGTGTTAAATCAGCTACAGATAAGAGTCAGAATGCTACTGAAGAAATGGAGATTGATTTATAATATAAATCTCACCTTTTCACGAATAGCAAAAACTGCTTCTAGTTCTTTGATGTCAGCCAGTTCTGTTATCACCTGTGTCAACTGCAACTTCAGCTTCAGTGTTCTGAATCTCCAGCCTGCTGTATCACCTGGCTCTTTTGCAATGTTCAAGCGCTACTACCACAAAAGGTTGCATATAATAATCATGTAGATAGAGGATTCATTAAGTAAAGTTAGAATGAGGAGCCATATGTGGCTGGATAATAAGCAATTACTTTGGTTAGAAGATGGGGGGCCTATAAGAGGGAGAAATAGTTTATTCAAAAAGGCCTCGCATAAATTTCAGTTAGT</gDNA_template>
            <first_frame> C  N  S  P  R  L  A  S  *  N  Q  K  N  A  V  S  V  L  L  G  G  A  R  A  V  Y  Q  Q  H  Q  W  Q  T  D  N  R  V  H  I  L  R  P  G  S  G  G  A  I  N  P  I  P  P  S  F  S  Y  P  C  P  R  F  S  S  V  P  G  Y  F  *  S  P  H  S  S  H  L  R  H  *  R  R  *  R  P  I  *  T  H  W  F  H  H  H  F  L  Y  L  V  S  R  T  L  P  S  I  C  P  I  L  H  F  I  R  R  S  P  C  R  A  R  A  G  P  R  N  D  V  N  F  L  Q  F  V  L  F  F  C  R  G  G  K  S  P  G  L  F  A  D  Y  *  C  G  F  Y  S  A  T  G  F  *  Y  F  G  P  R  V  S  A  L  Q  G  L  F  F  S  N  L  L  K  E  S  E  C  *  S  A  C  Y  C  C  S  C  A  R  Y  Q  G  S  P  R  A  E  N  S  P   : G  Q  L  N  I  W  L  F  S  P  L  P  L  D  A  Y  F  L  Q  L  S   : G  N  I  S  C  G  Q  F  T  S  E  G  N  R  E  V  H  K  D  S  W  R  S  V  T  T  Q  S  T  Y  Q  *  *  F  Y  I  S  P  Y  A  K  V  L  Y  T  P  S  A  E  *  I  C  S   : G  A  G  D  S  H  W  *  S  N  H  Q  *  M  L  L  H  *  K  E  S  N  *  H  L  C  C  C  Y  I  F  G  M  S  T  R  G  Q  A  E  D  P  G  *  N  M  *  G  D  W  T  N  *  G  Y  S  S  *  G  V  Q  G  A  F  G  E  L  G  *  S  P  T  I  K  L  *  T  S  C  S  T  R  E  G  F  S  F  S  Y  H  C  Y  R  P  F  I  N  T  E  S  *  Y  S  *  G  N  F  I  *  E  G  Q  A  S  *  T  S  R  L  I  R  Y  I  S  S  D  Q  R  Q  G  G  L  R  Q  Q  R  *  Y  *  Y  N  S  I  I  L  A  T  T  I  L  E  A  S  S  S  C  *  R  W  C  *  I  S  Y  R  *  E  S  E  C  Y  *  R  N  G  D  *  F  I  I  *  I  S  P  F  H  E  *  Q  K  L  L  L  V  L  *  C  Q  P  V  L  L  S  P  V  S  T  A  T  S  A  S  V  F  *  I  S  S  L  L  Y  H  L  A  L  L  Q  C  S  S  A  T  T  T  K  G  C  I  *  *  S  C  R  *  R  I  H  *  V  K  L  E  *  G  A  I  C  G  W  I  I  S  N  Y  F  G  *  K  M  G  G  L  *  E  G  E  I  V  Y  S  K  R  P  R  I  N  F  S  *  </first_frame>
            <second_frame>  A  I  P  H  A  *  L  V  E  I  R  K  M  R  C  P  Y  C  S  A  E  Q  G  R  C  T  S  S  T  S  G  R  P  I  T  E  C  T  S  C  G  R  V  V  E  E  R  L  T  Q  S  H  H  L  F  H  T  R  A  Q  D  S  P  L  C  L  A  T  S  D  L  P  T  L  P  I  S  A  T  N  D  D  E  D  P  F  E  P  T  G  F  I  T  T  F  S  T  W  S  L  E  P  Y  P  V  F  A  Q  S  S  I  S  F  A  G  H  L  A  E  L  E  R  V  L  E  M  T  S  T  S  S  S  S  S  S  S  S  V  V  V  E  N  L  R  A  Y  L  Q  I  I  D  V  A  S  I  L  R  L  D  S  D  I  S  D  H  A  F  Q  L  F  R  D  C  S  S  A  T  C  L  R  N  R  S  V  E  A  L  A  T  A  A  L  V  H  A  I  R  E  A  Q  E  P  R  T  L  Q  :  V  N  *  T  F  G  F  F  R  L  F  H  W  M  L  I  F  C  N  *  V  :  E  I  S  V  A  A  N  L  P  Q  K  E  I  G  K  Y  I  K  I  L  G  E  A  L  Q  L  S  Q  P  I  N  S  N  S  I  S  V  H  M  P  R  F  C  T  L  L  Q  L  N  K  S  A  Q  :  E  L  A  T  H  I  G  E  V  I  I  N  K  C  F  C  T  R  R  N  P  I  S  I  S  A  A  A  I  Y  L  A  C  Q  L  E  D  K  R  K  T  Q  A  E  I  C  K  V  T  G  L  T  E  V  T  L  R  K  V  Y  K  E  L  L  E  N  W  D  D  L  L  P  S  S  Y  K  P  V  V  P  P  E  K  A  F  P  S  A  T  I  A  T  G  R  S  S  T  P  R  V  D  I  V  E  G  T  S  S  E  R  D  K  P  V  K  P  V  D  S  L  D  I  S  P  Q  I  R  G  K  E  D  S  D  S  K  D  N  I  N  T  T  Q  L  S  W  P  P  P  F  W  K  P  Q  A  P  A  E  G  G  V  K  S  A  T  D  K  S  Q  N  A  T  E  E  M  E  I  D  L  *  Y  K  S  H  L  F  T  N  S  K  N  C  F  *  F  F  D  V  S  Q  F  C  Y  H  L  C  Q  L  Q  L  Q  L  Q  C  S  E  S  P  A  C  C  I  T  W  L  F  C  N  V  Q  A  L  L  P  Q  K  V  A  Y  N  N  H  V  D  R  G  F  I  K  *  S  *  N  E  E  P  Y  V  A  G  *  *  A  I  T  L  V  R  R  W  G  A  Y  K  R  E  K  *  F  I  Q  K  G  L  A  *  I  S  V  S </second_frame>
            <third_frame>   Q  F  P  T  P  S  *  L  K  S  E  K  C  G  V  R  T  A  R  R  S  K  G  G  V  P  A  A  P  V  A  D  R  *  P  S  A  H  P  A  A  G  *  W  R  S  D  *  P  N  P  T  I  F  F  I  P  V  P  K  I  L  L  C  A  W  L  L  L  I  S  P  L  F  P  S  P  P  L  T  T  M  K  T  H  L  N  P  L  V  S  S  P  L  S  L  L  G  L  S  N  P  T  Q  Y  L  P  N  P  P  F  H  S  P  V  T  L  Q  S  S  S  G  S  S  K  *  R  Q  L  P  P  V  R  P  L  L  L  S  W  W  K  I  S  G  L  I  C  R  L  L  M  W  L  L  F  C  D  W  I  L  I  F  R  T  T  R  F  S  S  S  G  I  V  L  Q  Q  L  A  *  G  I  G  V  L  K  R  L  L  L  L  L  L  C  T  L  S  G  K  P  K  S  R  E  L  S  R :   S  T  E  H  L  A  F  F  A  S  S  T  G  C  L  F  F  A  T  E  W :   K  Y  Q  L  R  P  I  Y  L  R  R  K  S  G  S  T  *  R  F  L  E  K  R  Y  N  S  V  N  L  S  I  V  I  L  Y  Q  S  I  C  Q  G  F  V  H  S  F  S  *  I  N  L  L  R :   S  W  R  L  T  L  V  K  *  S  S  I  N  A  F  A  L  E  G  I  Q  L  A  S  L  L  L  L  Y  I  W  H  V  N  *  R  T  S  G  R  P  R  L  K  Y  V  R  *  L  D  *  L  R  L  L  F  V  R  C  T  R  S  F  W  R  T  G  M  I  S  Y  H  Q  V  I  N  Q  L  F  H  Q  R  R  L  F  L  Q  L  P  L  L  Q  A  V  H  Q  H  R  E  L  I  *  L  R  E  L  H  L  R  G  T  S  Q  L  N  Q  S  T  H  *  I  Y  L  L  R  S  E  A  R  R  T  P  T  A  K  I  I  L  I  Q  L  N  Y  L  G  H  H  H  F  G  S  L  K  L  L  L  K  V  V  L  N  Q  L  Q  I  R  V  R  M  L  L  K  K  W  R  L  I  Y  N  I  N  L  T  F  S  R  I  A  K  T  A  S  S  S  L  M  S  A  S  S  V  I  T  C  V  N  C  N  F  S  F  S  V  L  N  L  Q  P  A  V  S  P  G  S  F  A  M  F  K  R  Y  Y  H  K  R  L  H  I  I  I  M  *  I  E  D  S  L  S  K  V  R  M  R  S  H  M  W  L  D  N  K  Q  L  L  W  L  E  D  G  G  P  I  R  G  R  N  S  L  F  K  K  A  S  H  K  F  Q  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118105" stop="118103"/>
                    <exon start="118016" stop="117858"/>
                    <exon start="117604" stop="117068"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEISVAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSSYKPVVPPEKAFPSATIATGRSSTPRVDIVEGTSSERDKPVKPVDSLDISPQIRGKEDSDSKDNINTTQLSWPPPFWKPQAPAEGGVKSATDKSQNATEEMEIDL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120162" stop="119563"/>
                    <exon start="118165" stop="118157"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVEIRKMRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLPTLPISATNDDEDPFEPTGFITTFSTWSLEPYPVFAQSSISFAGHLAELERVLEMTSTSSSSSSSSVVVENLRAYLQIIDVASILRLDSDISDHAFQLFRDCSSATCLRNRSVEALATAALVHAIREAQEPRTLQVN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="121464" PGL_stop="125758"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121464" e_stop="121846"/>
            <exon e_start="122010" e_stop="122225"/>
            <exon e_start="125700" e_stop="125758"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="121464" e_stop="121846" e_length="383"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="1.000">
            <gDNA_intron_boundary i_start="121847" i_stop="122009" i_length="163"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="122010" e_stop="122225" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.923" acc_prob="0.996">
            <gDNA_intron_boundary i_start="122226" i_stop="125699" i_length="3474"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="125700" e_stop="125758" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121464" stop="121846"/>
              <exon start="122010" stop="122225"/>
              <exon start="125700" stop="125758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567388" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTC : GAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCG : GGAATTCGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGGGAG</gDNA_template>
            <first_frame> *  K  *  I  I  Q  E  N  P  R  I  E  M  Q  S  N  S  N  K  P  N  V  H  I  K  G  K  R  E  K  A  K  R  N  F  I  C  S  K  K  R  K  K  E  *  G  M  T  I  F  P  Y  Q  R  Q  Q  H  L  H  R  R  S  R  L  R  R  R  K  L  P  I  L  P  F  S  V  E  V  V  I  S  F  G  P  L  P  L  S  H  C  *  L  C  G  L  C  S  P  E  L  L  P  S  V  G  P  P  V  T  S  T  P  Y  P  M  T  S  T  F  P  S  P  K  I  L  T  F  S :   K  W  K  K  G  R  S  *  *  S  I  C  G  M  Y  T  Q  T  A  V  G  S  N  C  *  S  F  G  R  K  H  L  R  L  P  M  R  S  *  P  V  T  S  L  E  S  Q  R  M  P  F  L  R  L  L  R  C  L  Y  A  T  F  L  L  N  H  H  L  F  I  R  R :   E  F  V  N  *  V  *  G  K  *  R  G  S  K  Q  L  Q  Q  G  </first_frame>
            <second_frame>  E  N  R  L  S  R  R  I  P  E  *  R  C  N  Q  I  Q  I  N  Q  T  Y  I  *  K  G  K  G  K  R  Q  K  G  I  L  F  V  Q  K  R  E  R  R  N  E  G  *  R  S  S  H  I  N  A  N  S  T  F  I  V  V  H  D  F  E  E  G  N  F  L  F  C  H  F  R  *  R  S  L  *  V  L  G  L  C  R  Y  L  I  V  S  F  V  V  Y  V  H  R  N  C  Y  P  P  L  V  R  R  *  P  Q  R  H  I  R  *  H  R  H  S  P  P  R  R  S  *  R  S   : R  N  G  R  K  G  E  V  S  E  A  Y  V  G  C  I  H  K  Q  P  W  D  Q  I  V  K  V  L  A  G  S  I  *  G  C  L  *  G  V  S  Q  *  R  P  W  S  P  R  G  C  P  F  *  D  C  *  D  V  C  T  L  H  S  Y  *  I  T  T  S  S  F  V   : G  N  S  *  I  K  S  K  A  N  E  E  G  A  N  N  C  N  R  E </second_frame>
            <third_frame>   K  I  D  Y  P  G  E  S  Q  N  R  D  A  I  K  F  K  *  T  K  R  T  Y  K  R  E  K  G  K  G  K  K  E  F  Y  L  F  K  K  E  K  E  G  M  R  D  D  D  L  P  I  S  T  P  T  A  P  S  S  S  F  T  T  S  K  K  E  T  S  Y  F  A  I  F  G  R  G  R  Y  K  F  W  A  F  A  A  I  S  L  L  A  L  W  S  M  F  T  G  T  V  T  L  R  W  S  A  G  N  L  N  A  I  S  D  D  I  D  I  P  L  P  E  D  L  D  V  L  :  E  M  E  E  R  E  K  L  V  K  H  M  W  D  V  Y  T  N  S  R  G  I  K  L  L  K  F  W  Q  E  A  F  E  A  A  Y  E  E  L  A  S  D  V  P  G  V  P  E  D  A  L  S  E  I  A  K  M  S  V  R  Y  I  P  I  E  S  P  P  L  H  S  S  :  G  I  R  E  L  S  L  R  Q  M  K  R  E  Q  T  T  A  T  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0023N04.3" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121520" stop="121846"/>
                    <exon start="122010" stop="122225"/>
                    <exon start="125700" stop="125756"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKRTYKREKGKGKKEFYLFKKEKEGMRDDDLPISTPTAPSSSFTTSKKETSYFAIFGRGRYKFWAFAAISLLALWSMFTGTVTLRWSAGNLNAISDDIDIPLPEDLDVLEMEEREKLVKHMWDVYTNSRGIKLLKFWQEAFEAAYEELASDVPGVPEDALSEIAKMSVRYIPIESPPLHSSGIRELSLRQMKREQTTATG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 57 chains have been computed
$ 
$ memory statistics:
$ 78336 bytes spliced alignments in total
$ 36 spliced alignments have been stored
$ 2176 bytes was the average size of a spliced alignment
$ 35896 bytes predicted gene locations in total
$ 24 predicted gene locations have been stored
$ 1495 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 59 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:09:47
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