SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 30436 4.5 0.7 1.9 C01HBa0023H04.1 1 4181 (98812) C Unknown00059 Unknown (413) 4000 1 1 3402 14.0 2.1 6.8 C01HBa0023H04.1 4047 4768 (98225) + Copia00110 Copia 1724 2411 (11721) 2 * 2365 10.5 0.8 1.9 C01HBa0023H04.1 4444 4820 (98173) + Unknown00020 Unknown 1 373 (4832) 3 * 2168 7.7 0.5 10.3 C01HBa0023H04.1 4531 4907 (98086) C Unknown00040 Unknown (2) 4680 4341 4 * 255 16.4 5.5 8.2 C01HBa0023H04.1 5330 5402 (97591) C SINE1_SO Unknown (3) 197 127 5 5540 12.1 4.7 1.5 C01HBa0023H04.1 6582 7582 (95411) C POTTEN1 Unknown (0) 1109 77 6 1081 12.4 1.8 4.6 C01HBa0023H04.1 7567 7785 (95208) C Gypsy00007 Gypsy (6060) 435 223 7 * 6495 12.9 1.5 4.3 C01HBa0023H04.1 8127 9322 (93671) C Gypsy00165 Gypsy (325) 6773 5611 8 3116 7.5 5.1 2.4 C01HBa0023H04.1 9322 9813 (93180) + Copia00168 Copia 4151 4655 (1) 9 * 39485 3.8 1.0 0.2 C01HBa0023H04.1 9923 14772 (88221) + Copia00005 Copia 1 4891 (0) 10 1248 12.0 2.8 4.7 C01HBa0023H04.1 14700 14953 (88040) C Unknown00035 Unknown (2632) 249 1 11 * 651 3.4 0.0 0.0 C01HBa0023H04.1 15082 15170 (87823) + Copia00005 Copia 1 89 (4802) 12 * 1855 7.6 0.4 0.0 C01HBa0023H04.1 15165 15413 (87580) C Gypsy00007 Gypsy (606) 5889 5640 13 277 19.6 0.0 0.0 C01HBa0023H04.1 15407 15462 (87531) C Gypsy00107 Gypsy (1999) 8900 8845 14 * 402 24.1 4.5 2.7 C01HBa0023H04.1 20607 20717 (82276) + Copia00172 Copia 5201 5313 (1314) 15 511 24.0 3.2 0.0 C01HBa0023H04.1 23917 24070 (78923) C Gypsy00073 Gypsy (11701) 383 225 16 715 19.0 2.8 0.7 C01HBa0023H04.1 24317 24459 (78534) + Unknown00046 Unknown 206 351 (9693) 17 427 14.1 5.1 0.0 C01HBa0023H04.1 25114 25191 (77802) C Copia00120 Copia (4) 4343 4262 18 1007 20.1 3.0 0.0 C01HBa0023H04.1 28835 29068 (73925) + SONATA2 Unknown 13 253 (0) 19 242 6.5 0.0 0.0 C01HBa0023H04.1 30255 30285 (72708) C ATHILA8ALTR Unknown (69) 1548 1518 20 * 963 11.0 4.5 0.0 C01HBa0023H04.1 30267 30421 (72572) + Gypsy00074 Gypsy 8153 8314 (5777) 21 831 6.4 0.0 0.0 C01HBa0023H04.1 30421 30529 (72464) + Copia00140 Copia 45 153 (3800) 22 * 252 26.1 6.8 2.5 C01HBa0023H04.1 33664 33781 (69212) + Gypsy00034 Gypsy 642 764 (6241) 23 * 288 19.8 10.6 3.2 C01HBa0023H04.1 33701 33794 (69199) C GYPSODE1_LTR Unknown (2536) 427 327 24 1133 14.7 0.9 1.8 C01HBa0023H04.1 36657 36878 (66115) C SONATA1 Unknown (0) 243 24 25 350 25.2 1.0 0.0 C01HBa0023H04.1 37291 37389 (65604) C Unknown00020 Unknown (4873) 332 233 26 * 426 19.5 4.8 0.8 C01HBa0023H04.1 37366 37489 (65504) + Unknown00040 Unknown 4374 4502 (180) 27 230 24.2 12.0 0.8 C01HBa0023H04.1 37399 37531 (65462) C Copia00110 Copia (11270) 2862 2715 28 * 403 24.8 6.5 1.6 C01HBa0023H04.1 38559 38681 (64312) C Gypsy00078 Gypsy (4041) 4066 3938 29 286 29.8 7.3 1.6 C01HBa0023H04.1 38594 38716 (64277) + Gypsy00092 Gypsy 6082 6211 (2) 30 * 244 25.9 3.5 0.0 C01HBa0023H04.1 39251 39308 (63685) C Gypsy00031 Gypsy (2099) 5170 5111 31 1193 13.5 1.5 0.0 C01HBa0023H04.1 41214 41413 (61580) + Copia00039 Copia 264 466 (4084) 32 629 15.0 8.9 13.1 C01HBa0023H04.1 41271 41662 (61331) C Copia00039 Copia (3442) 1108 869 33 * 1144 14.3 5.9 3.4 C01HBa0023H04.1 41819 42112 (60881) C Copia00039 Copia (3502) 1048 257 34 291 34.6 5.3 0.0 C01HBa0023H04.1 42116 42248 (60745) C RTE1_MT Unknown (1197) 1958 1819 35 274 18.8 6.2 0.0 C01HBa0023H04.1 45316 45395 (57598) + L1-3_CR Unknown 1063 1147 (844) 36 322 29.1 0.8 2.3 C01HBa0023H04.1 47851 47980 (55013) + Gypsy00177 Gypsy 868 995 (9310) 37 3056 17.4 2.1 1.1 C01HBa0023H04.1 49905 50561 (52432) C Unknown00045 Unknown (2480) 2044 1381 38 * 5774 16.4 3.5 3.7 C01HBa0023H04.1 50527 52138 (50855) C Gypsy00033 Gypsy (3331) 7664 6154 39 297 18.1 1.8 1.5 C01HBa0023H04.1 52525 52690 (50303) C Unknown00049 Unknown (0) 1709 446 40 254 13.5 0.0 1.9 C01HBa0023H04.1 52835 52887 (50106) + Unknown00049 Unknown 1658 1709 (7322) 41 233 18.8 0.0 2.0 C01HBa0023H04.1 58049 58097 (44896) + TS2 Unknown 600 647 (8) 42 1093 19.9 3.1 9.5 C01HBa0023H04.1 62895 63316 (39677) C Copia00172 Copia (4542) 2085 1691 43 5802 6.8 0.0 3.3 C01HBa0023H04.1 66316 67133 (35860) C Gypsy00043 Gypsy (12558) 1336 546 44 722 9.4 7.0 1.6 C01HBa0023H04.1 67022 67150 (35843) C Copia00110 Copia (835) 13297 13162 45 * 234 15.0 0.0 0.0 C01HBa0023H04.1 69296 69335 (33658) C Gypsy00203 Gypsy (1740) 5774 5735 46 32163 11.2 0.4 2.4 C01HBa0023H04.1 72975 77741 (25252) C Copia00166 Copia (2) 4672 1 47 403 27.0 1.7 3.3 C01HBa0023H04.1 81518 81703 (21290) + ATMU5 Unknown 1362 2846 (2677) 48 504 19.3 6.0 9.9 C01HBa0023H04.1 84291 84515 (18478) C Gypsy00140 Gypsy (971) 7002 5862 49 489 17.4 0.3 4.8 C01HBa0023H04.1 85222 85777 (17216) C TREP60 Unknown (0) 334 1 50 563 22.4 0.0 6.0 C01HBa0023H04.1 87514 87646 (15347) + Copia00143 Copia 78 202 (5102) 51 344 26.6 2.7 4.0 C01HBa0023H04.1 93255 93403 (9590) + Unknown00043 Unknown 5296 5442 (5882) 52 685 16.3 2.7 2.0 C01HBa0023H04.1 94713 94862 (8131) C Gypsy00073 Gypsy (10703) 1381 1231 53 493 19.6 5.4 12.2 C01HBa0023H04.1 94720 94940 (8053) + Unknown00019 Unknown 49 254 (14379) 54 * 759 19.6 7.4 5.3 C01HBa0023H04.1 94948 95232 (7761) C Gypsy00073 Gypsy (10857) 1227 937 53 * 856 16.5 9.2 6.0 C01HBa0023H04.1 95008 95291 (7702) C Copia00110 Copia (575) 13557 13265 55 2685 14.5 5.3 0.6 C01HBa0023H04.1 95537 96007 (6986) + TOTO1_LP_I Unknown 1657 2149 (1380) 56 1815 16.9 2.8 0.9 C01HBa0023H04.1 95985 96306 (6687) C Copia00154 Copia (3734) 469 142 57 * 2598 25.5 5.6 0.3 C01HBa0023H04.1 97047 97745 (5248) + Gypsy00041 Gypsy 3772 4507 (374) 58 316 26.6 8.5 0.8 C01HBa0023H04.1 99367 99495 (3498) + Gypsy00041 Gypsy 80 218 (4663) 59 312 26.1 5.9 0.0 C01HBa0023H04.1 99405 99523 (3470) C Copia00205 Copia (4959) 5297 5172 60 * 783 25.2 1.7 2.5 C01HBa0023H04.1 99718 99953 (3040) + Copia00191 Copia 3968 4201 (525) 61 776 24.9 5.5 5.8 C01HBa0023H04.1 99954 100080 (2913) C Gypsy00007 Gypsy (487) 6008 5647 62