#Draft Tomato chromosome 9
#autogenerated-by SGN mummer/phrap AGP generator (bsub_generate_agp.pl)
S.lycopersicum-chr9	1	10500000	1	N	10500000	contig	no	
S.lycopersicum-chr9	10500001	10609872	2	F	C09HBa0116C14.2	1	109872	+
S.lycopersicum-chr9	10609873	17250000	3	N	6640128	contig	no	
S.lycopersicum-chr9	17250001	17361868	4	F	C09HBa0203J14.1	1	111868	+
S.lycopersicum-chr9	17361869	41700000	5	N	24338132	contig	no	
S.lycopersicum-chr9	41700001	41826955	6	F	C09SLm0094A22.1	1	126955	+
S.lycopersicum-chr9	41826956	45000000	7	N	3173045	contig	no	
S.lycopersicum-chr9	45000001	45125286	8	F	C09HBa0099P03.2	1	125286	+
S.lycopersicum-chr9	45125287	80250000	9	N	35124714	contig	no	
S.lycopersicum-chr9	80250001	80361462	10	F	C09HBa0165P17.1	1	111462	+
S.lycopersicum-chr9	80361463	82875000	11	N	2513538	contig	no	
S.lycopersicum-chr9	82875001	82989526	12	F	C09HBa0109D11.1	1	114526	+
S.lycopersicum-chr9	82989527	83012593	13	F	C09HBa0226D21.1	90515	113581	+
# END OF DRAFT CHROMOSOME BUILD.  THE LINES BELOW CONTAIN SEQUENCES THAT COULD NOT BE LOCATED ON THE PHYSICAL MAP
S.lycopersicum-chr9	83012594	750000000000	14	N	749916987407	contig	no	
S.lycopersicum-chr9	750000000001	750000130684	15	F	C09HBa0179M08.1	1	130684	+
S.lycopersicum-chr9	750000130685	750000180684	16	N	50000	contig	no	
S.lycopersicum-chr9	750000180685	750000309791	17	F	C09HBa0135N15.1	1	129107	+
S.lycopersicum-chr9	750000309792	750000359791	18	N	50000	contig	no	
S.lycopersicum-chr9	750000359792	750000460601	19	F	C09HBa0047I13.1	1	100810	+
S.lycopersicum-chr9	750000460602	750000510601	20	N	50000	contig	no	
S.lycopersicum-chr9	750000510602	750000551525	21	F	C09HBa0142I14.1	1	40924	+
S.lycopersicum-chr9	750000551526	750000601525	22	N	50000	contig	no	
S.lycopersicum-chr9	750000601526	750000692361	23	F	C09SLe0103M07.1	1	90836	+