##gff-version 3
##sequence-region C04HBa0149O17.1 1 45002
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	9030	10358	0.999	+	0	ID=SGN-E394554_alignment_1;Target=SGN-E394554 1 697 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9030	9113	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E394554 1 84 +;Parent=SGN-E394554_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E394554 85 213 +;Parent=SGN-E394554_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9875	10358	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E394554 214 697 +;Parent=SGN-E394554_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	9031	10190	0.998	+	0	ID=SGN-E202390_alignment_1;Target=SGN-E202390 1 528 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9031	9113	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E202390 1 83 +;Parent=SGN-E202390_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E202390 84 212 +;Parent=SGN-E202390_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	9875	10190	0.997	+	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E202390 213 528 +;Parent=SGN-E202390_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	10464	11931	1.000	+	0	ID=SGN-E394553_alignment_1;Target=SGN-E394553 1 730 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	10464	10819	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E394553 1 356 +;Parent=SGN-E394553_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	11558	11931	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E394553 357 730 +;Parent=SGN-E394553_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	10466	11764	0.993	+	0	ID=SGN-E207661_alignment_1;Target=SGN-E207661 1 562 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	10466	10819	0.992	+	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E207661 1 355 +;Parent=SGN-E207661_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	11558	11764	0.995	+	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E207661 356 562 +;Parent=SGN-E207661_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	10644	11878	0.948	+	0	ID=SGN-E403605_alignment_1;Target=SGN-E403605 1 493 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	10644	10819	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E403605 1 176 +;Parent=SGN-E403605_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	11558	11878	0.928	+	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E403605 177 493 +;Parent=SGN-E403605_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	10644	11878	0.948	+	0	ID=SGN-E433590_alignment_1;Target=SGN-E433590 1 493 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	10644	10819	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E433590 1 176 +;Parent=SGN-E433590_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	11558	11878	0.928	+	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E433590 177 493 +;Parent=SGN-E433590_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	10644	11875	0.941	+	0	ID=SGN-E433591_alignment_1;Target=SGN-E433591 1 490 -
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	10644	10819	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E433591 1 176 -;Parent=SGN-E433591_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	11558	11875	0.918	+	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E433591 177 490 -;Parent=SGN-E433591_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	14183	16525	0.998	+	0	ID=SGN-E326243_alignment_1;Target=SGN-E326243 1 595 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	14183	14406	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E326243 1 224 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	15165	15203	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E326243 225 263 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	15428	15516	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E326243 264 352 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	15596	15686	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E326243 353 443 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	16279	16368	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E326243 444 533 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	16464	16525	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E326243 534 595 +;Parent=SGN-E326243_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	17080	18303	0.965	+	0	ID=SGN-E253474_alignment_1;Target=SGN-E253474 27 262 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	17080	17172	0.968	+	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E253474 27 119 +;Parent=SGN-E253474_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	17833	17859	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E253474 120 146 +;Parent=SGN-E253474_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	18084	18191	0.963	+	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E253474 147 254 +;Parent=SGN-E253474_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	18296	18303	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E253474 255 262 +;Parent=SGN-E253474_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	17842	21931	0.996	+	0	ID=SGN-E334184_alignment_1;Target=SGN-E334184 1 743 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	17842	17859	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E334184 1 18 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	18084	18191	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E334184 19 126 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	18296	18458	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E334184 127 289 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E334184 290 345 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E334184 346 454 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E334184 455 595 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21931	0.980	+	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E334184 596 743 +;Parent=SGN-E334184_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	18390	21861	1.000	+	0	ID=SGN-E265446_alignment_1;Target=SGN-E265446 1 453 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	18390	18458	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E265446 1 69 +;Parent=SGN-E265446_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E265446 70 125 +;Parent=SGN-E265446_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E265446 126 234 +;Parent=SGN-E265446_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E265446 235 375 +;Parent=SGN-E265446_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21861	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E265446 376 453 +;Parent=SGN-E265446_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	19599	23072	1.000	+	0	ID=SGN-E209851_alignment_1;Target=SGN-E209851 1 554 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	19599	19638	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E209851 1 40 +;Parent=SGN-E209851_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E209851 41 149 +;Parent=SGN-E209851_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E209851 150 290 +;Parent=SGN-E209851_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21963	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E209851 291 470 +;Parent=SGN-E209851_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E209851 471 554 +;Parent=SGN-E209851_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	20434	29234	0.983	+	0	ID=SGN-E461366_alignment_1;Target=SGN-E461366 1 772 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	20434	20471	0.921	+	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E461366 1 38 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21555	21695	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E461366 39 179 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21963	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E461366 180 359 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E461366 360 443 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	23172	23258	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E461366 444 530 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	24681	24725	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E461366 531 575 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	26768	26846	0.975	+	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E461366 576 654 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	28902	28971	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E461366 655 724 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	29187	29234	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_52;Target=SGN-E461366 725 772 +;Parent=SGN-E461366_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	20434	23224	0.978	+	0	ID=SGN-E430175_alignment_1;Target=SGN-E430175 1 497 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	20434	20471	0.921	+	0	ID=GTH_SGN_E_tom_potato_match_part_53;Target=SGN-E430175 1 38 +;Parent=SGN-E430175_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21555	21695	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_54;Target=SGN-E430175 39 180 +;Parent=SGN-E430175_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21963	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_55;Target=SGN-E430175 181 360 +;Parent=SGN-E430175_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_56;Target=SGN-E430175 361 444 +;Parent=SGN-E430175_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	23172	23224	0.981	+	0	ID=GTH_SGN_E_tom_potato_match_part_57;Target=SGN-E430175 445 497 +;Parent=SGN-E430175_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	21625	29271	0.983	+	0	ID=SGN-E485063_alignment_1;Target=SGN-E485063 1 701 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21625	21695	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_58;Target=SGN-E485063 1 71 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	21784	21963	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_59;Target=SGN-E485063 72 251 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_60;Target=SGN-E485063 252 335 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	23172	23258	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_61;Target=SGN-E485063 336 422 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	24681	24725	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_62;Target=SGN-E485063 423 467 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	26768	26846	0.975	+	0	ID=GTH_SGN_E_tom_potato_match_part_63;Target=SGN-E485063 468 546 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	28902	28971	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_64;Target=SGN-E485063 547 616 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	29187	29271	0.965	+	0	ID=GTH_SGN_E_tom_potato_match_part_65;Target=SGN-E485063 617 701 +;Parent=SGN-E485063_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	28963	33117	0.951	+	0	ID=SGN-E597891_alignment_1;Target=SGN-E597891 1 742 -
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	28963	28971	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_66;Target=SGN-E597891 1 9 -;Parent=SGN-E597891_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	29187	29464	0.957	+	0	ID=GTH_SGN_E_tom_potato_match_part_67;Target=SGN-E597891 10 290 -;Parent=SGN-E597891_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	31840	31956	0.991	+	0	ID=GTH_SGN_E_tom_potato_match_part_68;Target=SGN-E597891 291 407 -;Parent=SGN-E597891_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	32272	32334	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_69;Target=SGN-E597891 408 470 -;Parent=SGN-E597891_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	32838	33117	0.921	+	0	ID=GTH_SGN_E_tom_potato_match_part_70;Target=SGN-E597891 471 742 -;Parent=SGN-E597891_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	31926	33235	0.944	+	0	ID=SGN-E430176_alignment_1;Target=SGN-E430176 1 481 -
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	31926	31956	0.968	+	0	ID=GTH_SGN_E_tom_potato_match_part_71;Target=SGN-E430176 1 30 -;Parent=SGN-E430176_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	32272	32334	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_72;Target=SGN-E430176 31 93 -;Parent=SGN-E430176_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	32838	33235	0.937	+	0	ID=GTH_SGN_E_tom_potato_match_part_73;Target=SGN-E430176 94 481 -;Parent=SGN-E430176_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match	32865	33317	0.901	+	0	ID=SGN-E464563_alignment_1;Target=SGN-E464563 1 451 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	match_part	32865	33317	0.901	+	0	ID=GTH_SGN_E_tom_potato_match_part_74;Target=SGN-E464563 1 451 +;Parent=SGN-E464563_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	gene	9030	10358	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	mRNA	9030	10358	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	9030	9113	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	9875	10358	0.998	+	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	gene	10464	11931	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	mRNA	10464	11931	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	10464	10819	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	11558	11931	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	gene	14183	16525	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	mRNA	14183	16525	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	14183	14406	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	15165	15203	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	15428	15516	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	15596	15686	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	16279	16368	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	16464	16525	0.984	+	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	gene	17080	33317	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	mRNA	17080	33317	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	17080	17172	0.968	+	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	17833	17859	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	18084	18191	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	18296	18458	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	21784	21963	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	23172	23258	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	24681	24725	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_22;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	26768	26846	0.975	+	0	ID=GTH_SGN_E_tom_potato_exon_23;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	28902	28971	0.986	+	0	ID=GTH_SGN_E_tom_potato_exon_24;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	29187	29464	0.957	+	0	ID=GTH_SGN_E_tom_potato_exon_25;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	31840	31956	0.991	+	0	ID=GTH_SGN_E_tom_potato_exon_26;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	32272	32334	0.984	+	0	ID=GTH_SGN_E_tom_potato_exon_27;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato_potato	exon	32838	33317	0.901	+	0	ID=GTH_SGN_E_tom_potato_exon_28;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	2476	2720	612	+	0	ID=Unknown00025_alignment_1;Target=Unknown00025 245 474 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	3168	3397	900	+	0	ID=Copia00151_alignment_1;Target=Copia00151 5562 5821 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	5100	5256	853	-	0	ID=Unknown00046_alignment_1;Target=Unknown00046 24 175 -
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	5117	5427	2123	+	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3704 4020 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	6567	6671	738	+	0	ID=Gypsy00043_alignment_1;Target=Gypsy00043 528 631 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	6571	6686	707	-	0	ID=Unknown00019_alignment_1;Target=Unknown00019 585 699 -
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	6572	6832	699	+	0	ID=Copia00110_alignment_1;Target=Copia00110 13164 13460 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	6931	7078	758	+	0	ID=Copia00110_alignment_2;Target=Copia00110 13352 13496 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	6943	7382	1176	+	0	ID=Gypsy00043_alignment_2;Target=Gypsy00043 959 1405 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	12084	12717	3661	+	0	ID=Gypsy00043_alignment_3;Target=Gypsy00043 528 1264 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	12737	12899	429	-	0	ID=SONATA1_alignment_1;Target=SONATA1 66 236 -
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	34914	35090	646	-	0	ID=Unknown00043_alignment_1;Target=Unknown00043 349 528 -
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	35592	36297	2997	+	0	ID=Copia00109_alignment_1;Target=Copia00109 1 708 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	36324	36492	881	-	0	ID=Copia00137_alignment_1;Target=Copia00137 4616 4784 -
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	36820	36960	478	+	0	ID=SINE_SO_alignment_1;Target=SINE_SO 3 150 +
C04HBa0149O17.1	RepeatMasker	nucleotide_motif	40046	40094	233	+	0	ID=Copia00105_alignment_1;Target=Copia00105 4018 4066 +
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	13041	13197	311	+	0	ID=LE_HBa0039F24_T7_62111_rev_alignment_1;blast_gaps=0;Target=LE_HBa0039F24_T7_62111 66 222 -;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=2e-81
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	44508	44995	952	+	0	ID=LE_HBa0149O17_T7_90177_rev_alignment_1;blast_gaps=0;Target=LE_HBa0149O17_T7_90177 8 495 -;blast_percent_identity=99.59;blast_mismatches=2;blast_evalue=0.0
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	42462	43072	1170	+	0	ID=SL_FOS0003H19_pIBF_430820_fwd_alignment_1;blast_gaps=0;Target=SL_FOS0003H19_pIBF_430820 2 612 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	35174	35485	565	+	0	ID=SL_FOS0032D02_pIBR_415361_rev_alignment_1;blast_gaps=1;Target=SL_FOS0032D02_pIBR_415361 1 313 -;blast_percent_identity=98.08;blast_mismatches=5;blast_evalue=7e-158
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	9869	10115	490	+	0	ID=SL_FOS0073H06_pIBR_453152_fwd_alignment_1;blast_gaps=0;Target=SL_FOS0073H06_pIBR_453152 60 306 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=3e-135
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	36327	36753	799	+	0	ID=SL_FOS0237F22_pIBF_582162_fwd_alignment_1;blast_gaps=0;Target=SL_FOS0237F22_pIBF_582162 257 683 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0149O17.1	BLAST_tomato_bac_ends	match	39757	40061	605	+	0	ID=SL_FOS0282N18_pIBF_617098_fwd_alignment_1;blast_gaps=0;Target=SL_FOS0282N18_pIBF_617098 23 327 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=8e-170
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	9030	10358	0.999	+	0	ID=SGN-E394554_alignment_2;Target=SGN-E394554 1 697 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9030	9113	1.000	+	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E394554 1 84 +;Parent=SGN-E394554_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E394554 85 213 +;Parent=SGN-E394554_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9875	10358	0.998	+	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E394554 214 697 +;Parent=SGN-E394554_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	9031	10190	0.998	+	0	ID=SGN-E202390_alignment_2;Target=SGN-E202390 1 528 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9031	9113	1.000	+	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E202390 1 83 +;Parent=SGN-E202390_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E202390 84 212 +;Parent=SGN-E202390_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	9875	10190	0.997	+	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E202390 213 528 +;Parent=SGN-E202390_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	10464	11931	1.000	+	0	ID=SGN-E394553_alignment_2;Target=SGN-E394553 1 730 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	10464	10819	1.000	+	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E394553 1 356 +;Parent=SGN-E394553_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	11558	11931	1.000	+	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E394553 357 730 +;Parent=SGN-E394553_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	10466	11764	0.993	+	0	ID=SGN-E207661_alignment_2;Target=SGN-E207661 1 562 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	10466	10819	0.992	+	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E207661 1 355 +;Parent=SGN-E207661_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	11558	11764	0.995	+	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E207661 356 562 +;Parent=SGN-E207661_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	14183	16525	0.998	+	0	ID=SGN-E326243_alignment_2;Target=SGN-E326243 1 595 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	14183	14406	1.000	+	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E326243 1 224 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	15165	15203	1.000	+	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E326243 225 263 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	15428	15516	1.000	+	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E326243 264 352 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	15596	15686	1.000	+	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E326243 353 443 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	16279	16368	1.000	+	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E326243 444 533 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	16464	16525	0.984	+	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E326243 534 595 +;Parent=SGN-E326243_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	17080	18303	0.965	+	0	ID=SGN-E253474_alignment_2;Target=SGN-E253474 27 262 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	17080	17172	0.968	+	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E253474 27 119 +;Parent=SGN-E253474_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	17833	17859	1.000	+	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E253474 120 146 +;Parent=SGN-E253474_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	18084	18191	0.963	+	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E253474 147 254 +;Parent=SGN-E253474_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	18296	18303	1.000	+	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E253474 255 262 +;Parent=SGN-E253474_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	17842	21931	0.996	+	0	ID=SGN-E334184_alignment_2;Target=SGN-E334184 1 743 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	17842	17859	1.000	+	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E334184 1 18 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	18084	18191	1.000	+	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E334184 19 126 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	18296	18458	1.000	+	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E334184 127 289 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E334184 290 345 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E334184 346 454 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E334184 455 595 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21784	21931	0.980	+	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E334184 596 743 +;Parent=SGN-E334184_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	18390	21861	1.000	+	0	ID=SGN-E265446_alignment_2;Target=SGN-E265446 1 453 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	18390	18458	1.000	+	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E265446 1 69 +;Parent=SGN-E265446_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E265446 70 125 +;Parent=SGN-E265446_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E265446 126 234 +;Parent=SGN-E265446_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E265446 235 375 +;Parent=SGN-E265446_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21784	21861	1.000	+	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E265446 376 453 +;Parent=SGN-E265446_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match	19599	23072	1.000	+	0	ID=SGN-E209851_alignment_2;Target=SGN-E209851 1 554 +
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	19599	19638	1.000	+	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E209851 1 40 +;Parent=SGN-E209851_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E209851 41 149 +;Parent=SGN-E209851_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E209851 150 290 +;Parent=SGN-E209851_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	21784	21963	1.000	+	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E209851 291 470 +;Parent=SGN-E209851_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E209851 471 554 +;Parent=SGN-E209851_alignment_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	gene	9030	10358	.	+	0	ID=GTH_SGN_E_tom_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	mRNA	9030	10358	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	9030	9113	1.000	+	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	9195	9323	1.000	+	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	9875	10358	0.998	+	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	gene	10464	11931	.	+	0	ID=GTH_SGN_E_tom_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	mRNA	10464	11931	.	+	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	10464	10819	1.000	+	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	11558	11931	1.000	+	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	gene	14183	16525	.	+	0	ID=GTH_SGN_E_tom_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	mRNA	14183	16525	.	+	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	14183	14406	1.000	+	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	15165	15203	1.000	+	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	15428	15516	1.000	+	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	15596	15686	1.000	+	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	16279	16368	1.000	+	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	16464	16525	0.984	+	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	gene	17080	23072	.	+	0	ID=GTH_SGN_E_tom_gene_4
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	mRNA	17080	23072	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	17080	17172	0.968	+	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	17833	17859	1.000	+	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	18084	18191	1.000	+	0	ID=GTH_SGN_E_tom_exon_14;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	18296	18458	1.000	+	0	ID=GTH_SGN_E_tom_exon_15;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	19583	19638	1.000	+	0	ID=GTH_SGN_E_tom_exon_16;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	20363	20471	1.000	+	0	ID=GTH_SGN_E_tom_exon_17;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	21555	21695	1.000	+	0	ID=GTH_SGN_E_tom_exon_18;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	21784	21963	1.000	+	0	ID=GTH_SGN_E_tom_exon_19;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_E_tomato	exon	22989	23072	1.000	+	0	ID=GTH_SGN_E_tom_exon_20;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	gene	8943	39685	1	+	.	ID=g1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	transcript	8943	39685	.	+	.	ID=g1.t1_1;Parent=g1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	8943	9113	.	+	2	ID=g1.t1.cds_1;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	9195	9323	.	+	2	ID=g1.t1.cds_2;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	9875	10819	.	+	2	ID=g1.t1.cds_3;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	11558	11592	.	+	2	ID=g1.t1.cds_4;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	15165	15203	.	+	0	ID=g1.t1.cds_5;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	15428	15516	.	+	0	ID=g1.t1.cds_6;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	15596	15686	.	+	1	ID=g1.t1.cds_7;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	16279	16368	.	+	0	ID=g1.t1.cds_8;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	16464	16543	.	+	0	ID=g1.t1.cds_9;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	17080	17172	.	+	1	ID=g1.t1.cds_10;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	17833	17859	.	+	1	ID=g1.t1.cds_11;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	18084	18191	.	+	1	ID=g1.t1.cds_12;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	18296	18458	.	+	1	ID=g1.t1.cds_13;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	19583	19638	.	+	0	ID=g1.t1.cds_14;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	20363	20471	.	+	1	ID=g1.t1.cds_15;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	21555	21695	.	+	0	ID=g1.t1.cds_16;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	21784	21963	.	+	0	ID=g1.t1.cds_17;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	22989	23072	.	+	0	ID=g1.t1.cds_18;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	26768	26846	.	+	0	ID=g1.t1.cds_19;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	CDS	39618	39685	.	+	2	ID=g1.t1.cds_20;Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_cdna	stop_codon	39683	39685	.	+	0	Parent=g1.t1_1
C04HBa0149O17.1	AUGUSTUS_ab_initio	gene	18094	39685	1	+	.	ID=g1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	transcript	18094	39685	.	+	.	ID=g1.t1_2;Parent=g1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	start_codon	18094	18096	.	+	0	Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	CDS	18094	18191	.	+	0	ID=g1.t1.cds_21;Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	CDS	18296	18458	.	+	1	ID=g1.t1.cds_22;Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	CDS	21784	21963	.	+	0	ID=g1.t1.cds_23;Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	CDS	26768	26846	.	+	0	ID=g1.t1.cds_24;Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	CDS	39618	39685	.	+	2	ID=g1.t1.cds_25;Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_ab_initio	stop_codon	39683	39685	.	+	0	Parent=g1.t1_2
C04HBa0149O17.1	AUGUSTUS_tom_ugs	gene	8943	39685	1	+	.	ID=g1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	transcript	8943	39685	.	+	.	ID=g1.t1_3;Parent=g1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	8943	9113	.	+	2	ID=g1.t1.cds_26;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	9195	9323	.	+	2	ID=g1.t1.cds_27;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	9875	10819	.	+	2	ID=g1.t1.cds_28;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	11558	11592	.	+	2	ID=g1.t1.cds_29;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	15165	15203	.	+	0	ID=g1.t1.cds_30;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	15428	15516	.	+	0	ID=g1.t1.cds_31;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	15596	15686	.	+	1	ID=g1.t1.cds_32;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	16279	16368	.	+	0	ID=g1.t1.cds_33;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	16464	16543	.	+	0	ID=g1.t1.cds_34;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	17080	17172	.	+	1	ID=g1.t1.cds_35;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	17833	17859	.	+	1	ID=g1.t1.cds_36;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	18084	18191	.	+	1	ID=g1.t1.cds_37;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	18296	18458	.	+	1	ID=g1.t1.cds_38;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	19583	19638	.	+	0	ID=g1.t1.cds_39;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	20363	20471	.	+	1	ID=g1.t1.cds_40;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	21555	21695	.	+	0	ID=g1.t1.cds_41;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	21784	21963	.	+	0	ID=g1.t1.cds_42;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	22989	23072	.	+	0	ID=g1.t1.cds_43;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	26768	26846	.	+	0	ID=g1.t1.cds_44;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	CDS	39618	39685	.	+	2	ID=g1.t1.cds_45;Parent=g1.t1_3
C04HBa0149O17.1	AUGUSTUS_tom_ugs	stop_codon	39683	39685	.	+	0	Parent=g1.t1_3
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match	9030	11931	1.000	+	0	ID=SGN-U315358_alignment_1;Target=SGN-U315358 1 1532 +
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	9030	9113	1.000	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U315358 1 84 +;Parent=SGN-U315358_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	9195	9323	1.000	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U315358 85 213 +;Parent=SGN-U315358_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	9875	10819	1.000	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U315358 214 1158 +;Parent=SGN-U315358_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	11558	11931	1.000	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U315358 1159 1532 +;Parent=SGN-U315358_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match	14183	16525	0.998	+	0	ID=SGN-U345085_alignment_1;Target=SGN-U345085 1 595 +
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	14183	14406	1.000	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U345085 1 224 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	15165	15203	1.000	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U345085 225 263 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	15428	15516	1.000	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U345085 264 352 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	15596	15686	1.000	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U345085 353 443 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	16279	16368	1.000	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U345085 444 533 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	16464	16525	0.984	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U345085 534 595 +;Parent=SGN-U345085_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match	17080	23072	0.997	+	0	ID=SGN-U326716_alignment_1;Target=SGN-U326716 27 987 +
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	17080	17172	0.968	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U326716 27 119 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	17833	17859	1.000	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U326716 120 146 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	18084	18191	1.000	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U326716 147 254 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	18296	18458	1.000	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U326716 255 417 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U326716 418 473 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U326716 474 582 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U326716 583 723 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	21784	21963	1.000	+	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U326716 724 903 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U326716 904 987 +;Parent=SGN-U326716_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	gene	9030	11931	.	+	0	ID=GTH_SGN_U_tom_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	mRNA	9030	11931	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	9030	9113	1.000	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	9195	9323	1.000	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	9875	10819	1.000	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	11558	11931	1.000	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	gene	14183	16525	.	+	0	ID=GTH_SGN_U_tom_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	mRNA	14183	16525	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	14183	14406	1.000	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	15165	15203	1.000	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	15428	15516	1.000	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	15596	15686	1.000	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	16279	16368	1.000	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	16464	16525	0.984	+	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	gene	17080	23072	.	+	0	ID=GTH_SGN_U_tom_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	mRNA	17080	23072	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	17080	17172	0.968	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	17833	17859	1.000	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	18084	18191	1.000	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	18296	18458	1.000	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	19583	19638	1.000	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	20363	20471	1.000	+	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	21555	21695	1.000	+	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	21784	21963	1.000	+	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_U_tomato	exon	22989	23072	1.000	+	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match	17080	23072	0.997	+	0	ID=SGN-M7030_alignment_1;Target=SGN-M7030 27 987 +
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	17080	17172	0.968	+	0	ID=GTH_SGN_markers_match_part_1;Target=SGN-M7030 27 119 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	17833	17859	1.000	+	0	ID=GTH_SGN_markers_match_part_2;Target=SGN-M7030 120 146 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	18084	18191	1.000	+	0	ID=GTH_SGN_markers_match_part_3;Target=SGN-M7030 147 254 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	18296	18458	1.000	+	0	ID=GTH_SGN_markers_match_part_4;Target=SGN-M7030 255 417 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	19583	19638	1.000	+	0	ID=GTH_SGN_markers_match_part_5;Target=SGN-M7030 418 473 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	20363	20471	1.000	+	0	ID=GTH_SGN_markers_match_part_6;Target=SGN-M7030 474 582 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	21555	21695	1.000	+	0	ID=GTH_SGN_markers_match_part_7;Target=SGN-M7030 583 723 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	21784	21963	1.000	+	0	ID=GTH_SGN_markers_match_part_8;Target=SGN-M7030 724 903 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_markers_match_part_9;Target=SGN-M7030 904 987 +;Parent=SGN-M7030_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match	20434	29271	0.981	+	0	ID=SGN-M7030-2_alignment_1;Target=SGN-M7030-2 1 809 +
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	20434	20471	0.921	+	0	ID=GTH_SGN_markers_match_part_10;Target=SGN-M7030-2 1 38 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	21555	21695	0.986	+	0	ID=GTH_SGN_markers_match_part_11;Target=SGN-M7030-2 39 179 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	21784	21963	0.972	+	0	ID=GTH_SGN_markers_match_part_12;Target=SGN-M7030-2 180 359 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	22989	23072	1.000	+	0	ID=GTH_SGN_markers_match_part_13;Target=SGN-M7030-2 360 443 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	23172	23258	0.989	+	0	ID=GTH_SGN_markers_match_part_14;Target=SGN-M7030-2 444 530 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	24681	24725	1.000	+	0	ID=GTH_SGN_markers_match_part_15;Target=SGN-M7030-2 531 575 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	26768	26846	0.975	+	0	ID=GTH_SGN_markers_match_part_16;Target=SGN-M7030-2 576 654 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	28902	28971	0.986	+	0	ID=GTH_SGN_markers_match_part_17;Target=SGN-M7030-2 655 724 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	GenomeThreader_SGN_markers	match_part	29187	29271	0.965	+	0	ID=GTH_SGN_markers_match_part_18;Target=SGN-M7030-2 725 809 +;Parent=SGN-M7030-2_alignment_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	gene	8943	11688	1	+	.	ID=g1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	transcript	8943	11688	.	+	.	ID=g1.t1_4;Parent=g1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	8943	9113	.	+	2	ID=g1.t1.cds_46;Parent=g1.t1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	9195	9323	.	+	2	ID=g1.t1.cds_47;Parent=g1.t1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	9875	10819	.	+	2	ID=g1.t1.cds_48;Parent=g1.t1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	11558	11688	.	+	2	ID=g1.t1.cds_49;Parent=g1.t1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	stop_codon	11686	11688	.	+	0	Parent=g1.t1_4
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	gene	14278	29295	1	+	.	ID=g2_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	transcript	14278	29295	.	+	.	ID=g2.t1_1;Parent=g2_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	start_codon	14278	14280	.	+	0	Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	14278	14406	.	+	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	15165	15203	.	+	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	15428	15516	.	+	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	15596	15686	.	+	1	ID=g2.t1.cds_4;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	16279	16368	.	+	0	ID=g2.t1.cds_5;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	16464	16543	.	+	0	ID=g2.t1.cds_6;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	17080	17172	.	+	1	ID=g2.t1.cds_7;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	17833	17859	.	+	1	ID=g2.t1.cds_8;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	18084	18191	.	+	1	ID=g2.t1.cds_9;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	18296	18458	.	+	1	ID=g2.t1.cds_10;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	19583	19638	.	+	0	ID=g2.t1.cds_11;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	20363	20471	.	+	1	ID=g2.t1.cds_12;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	21555	21695	.	+	0	ID=g2.t1.cds_13;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	21784	21963	.	+	0	ID=g2.t1.cds_14;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	22989	23072	.	+	0	ID=g2.t1.cds_15;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	23172	23258	.	+	0	ID=g2.t1.cds_16;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	24681	24725	.	+	0	ID=g2.t1.cds_17;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	26768	26846	.	+	0	ID=g2.t1.cds_18;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	28902	28971	.	+	2	ID=g2.t1.cds_19;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	29187	29295	.	+	1	ID=g2.t1.cds_20;Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	stop_codon	29293	29295	.	+	0	Parent=g2.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	gene	29408	32969	1	+	.	ID=g3_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	transcript	29408	32969	.	+	.	ID=g3.t1_1;Parent=g3_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	start_codon	29408	29410	.	+	0	Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	29408	29464	.	+	0	ID=g3.t1.cds_1;Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	31840	31956	.	+	0	ID=g3.t1.cds_2;Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	32272	32334	.	+	0	ID=g3.t1.cds_3;Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	32838	32969	.	+	0	ID=g3.t1.cds_4;Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	stop_codon	32967	32969	.	+	0	Parent=g3.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	gene	43500	43623	1	-	.	ID=g4_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	transcript	43500	43623	.	-	.	ID=g4.t1_1;Parent=g4_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	stop_codon	43500	43502	.	-	0	Parent=g4.t1_1
C04HBa0149O17.1	AUGUSTUS_tom_pot_cdna	CDS	43500	43623	.	-	1	ID=g4.t1.cds_1;Parent=g4.t1_1
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9319	122	+	0	ID=AT1G18140.1_fwd_alignment_1;blast_gaps=1;Target=AT1G18140.1 86 208 +;blast_percent_identity=41.33;blast_mismatches=88;blast_evalue=3e-26
C04HBa0149O17.1	BLAST_ath_pep	match	9874	10830	271	+	0	ID=AT1G18140.1_fwd_alignment_2;blast_gaps=5;Target=AT1G18140.1 210 542 +;blast_percent_identity=44.31;blast_mismatches=171;blast_evalue=3e-71
C04HBa0149O17.1	BLAST_ath_pep	match	21784	21972	117	+	0	ID=AT1G71820.1_fwd_alignment_1;blast_gaps=0;Target=AT1G71820.1 409 471 +;blast_percent_identity=88.89;blast_mismatches=7;blast_evalue=6e-46
C04HBa0149O17.1	BLAST_ath_pep	match	21555	21695	90.9	+	0	ID=AT1G71820.1_fwd_alignment_2;blast_gaps=0;Target=AT1G71820.1 362 408 +;blast_percent_identity=91.49;blast_mismatches=4;blast_evalue=6e-46
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9319	132	+	0	ID=AT2G29130.1_fwd_alignment_1;blast_gaps=1;Target=AT2G29130.1 87 209 +;blast_percent_identity=42.67;blast_mismatches=86;blast_evalue=2e-29
C04HBa0149O17.1	BLAST_ath_pep	match	9874	10827	272	+	0	ID=AT2G29130.1_fwd_alignment_2;blast_gaps=9;Target=AT2G29130.1 211 533 +;blast_percent_identity=45.71;blast_mismatches=169;blast_evalue=1e-71
C04HBa0149O17.1	BLAST_ath_pep	match	9877	10830	297	+	0	ID=AT2G30210.1_fwd_alignment_1;blast_gaps=7;Target=AT2G30210.1 210 531 +;blast_percent_identity=48.48;blast_mismatches=159;blast_evalue=5e-79
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9325	152	+	0	ID=AT2G30210.1_fwd_alignment_2;blast_gaps=1;Target=AT2G30210.1 85 209 +;blast_percent_identity=48.68;blast_mismatches=78;blast_evalue=2e-35
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9325	135	+	0	ID=AT2G38080.1_fwd_alignment_1;blast_gaps=1;Target=AT2G38080.1 84 208 +;blast_percent_identity=43.42;blast_mismatches=86;blast_evalue=2e-30
C04HBa0149O17.1	BLAST_ath_pep	match	9880	10830	269	+	0	ID=AT2G38080.1_fwd_alignment_2;blast_gaps=5;Target=AT2G38080.1 209 519 +;blast_percent_identity=44.34;blast_mismatches=176;blast_evalue=1e-70
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9331	148	+	0	ID=AT2G40370.1_fwd_alignment_1;blast_gaps=1;Target=AT2G40370.1 86 212 +;blast_percent_identity=43.51;blast_mismatches=87;blast_evalue=3e-34
C04HBa0149O17.1	BLAST_ath_pep	match	9868	10827	305	+	0	ID=AT2G40370.1_fwd_alignment_2;blast_gaps=4;Target=AT2G40370.1 208 540 +;blast_percent_identity=44.51;blast_mismatches=170;blast_evalue=1e-81
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9319	112	+	0	ID=AT2G46570.1_fwd_alignment_1;blast_gaps=1;Target=AT2G46570.1 89 211 +;blast_percent_identity=38.67;blast_mismatches=92;blast_evalue=3e-23
C04HBa0149O17.1	BLAST_ath_pep	match	9868	10827	238	+	0	ID=AT2G46570.1_fwd_alignment_2;blast_gaps=6;Target=AT2G46570.1 211 529 +;blast_percent_identity=39.14;blast_mismatches=192;blast_evalue=2e-61
C04HBa0149O17.1	BLAST_ath_pep	match	9880	10821	251	+	0	ID=AT3G09220.1_fwd_alignment_1;blast_gaps=5;Target=AT3G09220.1 209 525 +;blast_percent_identity=41.43;blast_mismatches=181;blast_evalue=3e-65
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9316	143	+	0	ID=AT3G09220.1_fwd_alignment_2;blast_gaps=1;Target=AT3G09220.1 83 204 +;blast_percent_identity=43.62;blast_mismatches=84;blast_evalue=1e-32
C04HBa0149O17.1	BLAST_ath_pep	match	9880	10827	150	+	0	ID=AT4G39830.1_fwd_alignment_1;blast_gaps=8;Target=AT4G39830.1 237 542 +;blast_percent_identity=32.10;blast_mismatches=212;blast_evalue=5e-35
C04HBa0149O17.1	BLAST_ath_pep	match	9880	10827	255	+	0	ID=AT5G01040.1_fwd_alignment_1;blast_gaps=7;Target=AT5G01040.1 205 526 +;blast_percent_identity=40.62;blast_mismatches=184;blast_evalue=2e-66
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9334	115	+	0	ID=AT5G01040.1_fwd_alignment_2;blast_gaps=2;Target=AT5G01040.1 85 206 +;blast_percent_identity=40.65;blast_mismatches=92;blast_evalue=2e-24
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9334	115	+	0	ID=AT5G01050.1_fwd_alignment_1;blast_gaps=2;Target=AT5G01050.1 85 206 +;blast_percent_identity=40.65;blast_mismatches=92;blast_evalue=3e-24
C04HBa0149O17.1	BLAST_ath_pep	match	9880	10827	251	+	0	ID=AT5G01050.1_fwd_alignment_2;blast_gaps=5;Target=AT5G01050.1 205 528 +;blast_percent_identity=40.92;blast_mismatches=183;blast_evalue=4e-65
C04HBa0149O17.1	BLAST_ath_pep	match	9868	10830	252	+	0	ID=AT5G01190.1_fwd_alignment_1;blast_gaps=3;Target=AT5G01190.1 204 519 +;blast_percent_identity=41.12;blast_mismatches=189;blast_evalue=1e-65
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9325	134	+	0	ID=AT5G01190.1_fwd_alignment_2;blast_gaps=1;Target=AT5G01190.1 82 206 +;blast_percent_identity=44.08;blast_mismatches=85;blast_evalue=4e-30
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9316	131	+	0	ID=AT5G03260.1_fwd_alignment_1;blast_gaps=1;Target=AT5G03260.1 83 204 +;blast_percent_identity=44.30;blast_mismatches=83;blast_evalue=4e-29
C04HBa0149O17.1	BLAST_ath_pep	match	9877	10830	281	+	0	ID=AT5G03260.1_fwd_alignment_2;blast_gaps=6;Target=AT5G03260.1 208 518 +;blast_percent_identity=46.08;blast_mismatches=171;blast_evalue=3e-74
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9319	150	+	0	ID=AT5G05390.1_fwd_alignment_1;blast_gaps=1;Target=AT5G05390.1 84 206 +;blast_percent_identity=46.67;blast_mismatches=80;blast_evalue=9e-35
C04HBa0149O17.1	BLAST_ath_pep	match	9874	10827	312	+	0	ID=AT5G05390.1_fwd_alignment_2;blast_gaps=4;Target=AT5G05390.1 208 525 +;blast_percent_identity=47.37;blast_mismatches=165;blast_evalue=1e-83
C04HBa0149O17.1	BLAST_ath_pep	match	9868	10821	276	+	0	ID=AT5G07130.1_fwd_alignment_1;blast_gaps=7;Target=AT5G07130.1 120 442 +;blast_percent_identity=43.77;blast_mismatches=174;blast_evalue=6e-73
C04HBa0149O17.1	BLAST_ath_pep	match	8888	9319	136	+	0	ID=AT5G07130.1_fwd_alignment_2;blast_gaps=3;Target=AT5G07130.1 2 120 +;blast_percent_identity=48.63;blast_mismatches=73;blast_evalue=1e-30
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9316	149	+	0	ID=AT5G09360.1_fwd_alignment_1;blast_gaps=2;Target=AT5G09360.1 93 215 +;blast_percent_identity=46.67;blast_mismatches=79;blast_evalue=1e-34
C04HBa0149O17.1	BLAST_ath_pep	match	9874	10827	359	+	0	ID=AT5G09360.1_fwd_alignment_2;blast_gaps=4;Target=AT5G09360.1 218 529 +;blast_percent_identity=53.75;blast_mismatches=146;blast_evalue=1e-97
C04HBa0149O17.1	BLAST_ath_pep	match	9886	10830	131	+	0	ID=AT5G21100.1_fwd_alignment_1;blast_gaps=6;Target=AT5G21100.1 225 524 +;blast_percent_identity=30.19;blast_mismatches=219;blast_evalue=3e-29
C04HBa0149O17.1	BLAST_ath_pep	match	9886	10830	136	+	0	ID=AT5G21105.1_fwd_alignment_1;blast_gaps=11;Target=AT5G21105.1 184 483 +;blast_percent_identity=31.08;blast_mismatches=214;blast_evalue=1e-30
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9316	154	+	0	ID=AT5G48100.1_fwd_alignment_1;blast_gaps=1;Target=AT5G48100.1 79 200 +;blast_percent_identity=48.99;blast_mismatches=76;blast_evalue=6e-36
C04HBa0149O17.1	BLAST_ath_pep	match	9871	10830	342	+	0	ID=AT5G48100.1_fwd_alignment_2;blast_gaps=8;Target=AT5G48100.1 202 524 +;blast_percent_identity=53.96;blast_mismatches=143;blast_evalue=1e-92
C04HBa0149O17.1	BLAST_ath_pep	match	9799	10830	256	+	0	ID=AT5G58910.1_fwd_alignment_1;blast_gaps=6;Target=AT5G58910.1 146 484 +;blast_percent_identity=40.29;blast_mismatches=203;blast_evalue=7e-67
C04HBa0149O17.1	BLAST_ath_pep	match	8897	9313	117	+	0	ID=AT5G58910.1_fwd_alignment_2;blast_gaps=1;Target=AT5G58910.1 52 163 +;blast_percent_identity=41.01;blast_mismatches=82;blast_evalue=6e-25
C04HBa0149O17.1	BLAST_ath_pep	match	8870	9316	120	+	0	ID=AT5G60020.1_fwd_alignment_1;blast_gaps=1;Target=AT5G60020.1 82 203 +;blast_percent_identity=38.26;blast_mismatches=92;blast_evalue=1e-25
C04HBa0149O17.1	BLAST_ath_pep	match	9874	10830	277	+	0	ID=AT5G60020.1_fwd_alignment_2;blast_gaps=8;Target=AT5G60020.1 206 538 +;blast_percent_identity=45.24;blast_mismatches=167;blast_evalue=5e-73