SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 3415 14.1 2.3 4.8 C04SLm0033N19.1 166 867 (120457) + Copia00110 Copia 1728 2411 (11721) 1 * 7384 11.5 0.4 3.5 C04SLm0033N19.1 625 1795 (119529) C Unknown00040 Unknown (1) 4681 3547 2 1108 12.3 0.0 0.0 C04SLm0033N19.1 1792 1961 (119363) C Unknown00040 Unknown (1582) 3100 2931 2 * 9769 13.9 5.0 3.9 C04SLm0033N19.1 1959 3958 (117366) C Unknown00033 Unknown (2442) 2175 154 3 3193 15.2 3.0 4.9 C04SLm0033N19.1 3924 4622 (116702) + Copia00110 Copia 1724 2409 (11723) 4 * 1983 15.2 1.1 2.1 C04SLm0033N19.1 4300 4676 (116648) + Unknown00020 Unknown 1 373 (4832) 5 * 1495 17.2 1.5 10.5 C04SLm0033N19.1 4387 4775 (116549) C Unknown00040 Unknown (2) 4680 4327 6 * 1232 6.0 6.0 0.0 C04SLm0033N19.1 5298 5481 (115843) C Unknown00049 Unknown (4269) 4762 4568 7 * 28062 4.6 1.2 0.5 C04SLm0033N19.1 5394 8876 (112448) + Copia00018 Copia 1 3509 (877) 8 7952 5.7 1.4 0.1 C04SLm0033N19.1 8794 9798 (111526) C Unknown00049 Unknown (3358) 5673 4656 9 * 680 4.5 0.0 0.0 C04SLm0033N19.1 9768 9856 (111468) + Copia00018 Copia 1 89 (4297) 10 * 20073 23.1 2.1 2.3 C04SLm0033N19.1 10852 15759 (105565) + Copia00012 Copia 66 4965 (39) 11 1096 29.6 4.2 5.0 C04SLm0033N19.1 15127 15844 (105480) C ATCOPIA30_I Unknown (2173) 1696 985 12 * 1461 4.1 0.5 0.0 C04SLm0033N19.1 18084 18277 (103047) C Unknown00049 Unknown (4269) 4762 4568 13 * 35352 4.9 0.2 0.9 C04SLm0033N19.1 18190 22608 (98716) + Copia00018 Copia 1 4386 (0) 14 452 8.1 4.7 0.0 C04SLm0033N19.1 22609 22694 (98630) C Unknown00049 Unknown (1736) 7295 7206 15 259 0.0 0.0 0.0 C04SLm0033N19.1 22685 22713 (98611) + Copia00018 Copia 3 31 (4355) 16 * 709 1.1 0.0 0.0 C04SLm0033N19.1 22714 22801 (98523) + Copia00018 Copia 1 88 (4298) 16 1109 21.0 6.2 4.3 C04SLm0033N19.1 22807 23130 (98194) + Copia00172 Copia 1740 2069 (4558) 17 248 20.5 20.2 1.6 C04SLm0033N19.1 24427 24454 (96870) C Unknown00029 Unknown (2378) 3331 3264 18 302 9.7 2.9 10.1 C04SLm0033N19.1 24455 24523 (96801) C Copia00063 Copia (3761) 155 92 19 * 1617 17.0 3.4 5.3 C04SLm0033N19.1 24517 24967 (96357) C Copia00008 Copia (0) 5110 3489 20 248 20.5 20.2 1.6 C04SLm0033N19.1 24524 24555 (96769) C Unknown00029 Unknown (2446) 3263 3186 18 * 3573 18.3 4.1 0.6 C04SLm0033N19.1 24963 25626 (95698) C Copia00013 Copia (451) 3290 2604 21 824 27.1 11.1 3.4 C04SLm0033N19.1 25660 26137 (95187) C Copia00124 Copia (1365) 3905 3391 22 * 2025 24.1 2.3 2.7 C04SLm0033N19.1 25749 26346 (94978) + Copia00110 Copia 12110 12705 (1427) 23 1975 19.2 0.7 2.2 C04SLm0033N19.1 26331 26783 (94541) + Copia00110 Copia 12536 12981 (1151) 23 * 581 27.1 9.4 3.4 C04SLm0033N19.1 26785 27051 (94273) C Copia00173 Copia (2465) 2563 2281 24 * 1376 24.5 11.4 2.1 C04SLm0033N19.1 27046 27657 (93667) C Copia00013 Copia (2826) 915 247 25 353 33.5 3.3 5.5 C04SLm0033N19.1 28284 28555 (92769) C Copia00124 Copia (4210) 1060 795 26 363 33.0 0.0 0.0 C04SLm0033N19.1 28587 28698 (92626) + Copia00012 Copia 4293 4404 (600) 27 276 26.5 2.0 0.0 C04SLm0033N19.1 29250 29347 (91977) + Copia00198 Copia 8043 8142 (214) 28 * 608 16.0 8.5 11.0 C04SLm0033N19.1 29269 29584 (91740) C Copia00063 Copia (34) 5100 18 29 632 19.4 5.1 4.0 C04SLm0033N19.1 29914 30090 (91234) + Unknown00043 Unknown 349 527 (10797) 30 326 21.9 7.7 2.4 C04SLm0033N19.1 30247 30414 (90910) C ATHPOGON2 Unknown (101) 590 414 31 34809 0.0 0.0 0.0 C04SLm0033N19.1 31540 35370 (85954) C Copia00210 Copia (0) 3831 1 32 880 2.5 0.0 0.8 C04SLm0033N19.1 35528 35647 (85677) C Copia00126 Copia (0) 4019 3901 33 488 26.9 4.8 0.6 C04SLm0033N19.1 35809 35976 (85348) C Copia00110 Copia (11242) 2890 2716 34 * 1032 25.8 2.0 0.7 C04SLm0033N19.1 35895 36187 (85137) C Unknown00020 Unknown (4832) 373 77 35 301 12.8 3.1 2.1 C04SLm0033N19.1 36499 36510 (84814) C Copia00112 Copia (1158) 7729 7633 36 426 2.4 1.2 0.0 C04SLm0033N19.1 36511 36594 (84730) + Gypsy00046 Gypsy 4078 4162 (6909) 37 364 5.4 1.1 1.1 C04SLm0033N19.1 36520 36612 (84712) C Gypsy00046 Gypsy (6908) 4163 4071 37 * 282 26.0 4.5 6.8 C04SLm0033N19.1 36949 37080 (84244) + Gypsy00136 Gypsy 4783 4911 (12) 38 1570 10.0 0.8 0.4 C04SLm0033N19.1 38788 39029 (82295) + SONATA1 Unknown 1 243 (0) 39 287 18.3 0.0 6.6 C04SLm0033N19.1 40012 40087 (81237) C Copia00158 Copia (4234) 84 14 40 492 20.8 11.5 4.8 C04SLm0033N19.1 41194 41445 (79879) + TORTL1 Unknown 9419 9687 (8) 41 * 1320 32.7 4.4 3.1 C04SLm0033N19.1 41237 42168 (79156) + Copia00194 Copia 273 1216 (9046) 42 235 28.6 0.0 0.0 C04SLm0033N19.1 42372 42427 (78897) + Copia00101 Copia 1061 1116 (6863) 43 1539 32.5 4.4 4.9 C04SLm0033N19.1 42442 43854 (77470) + Copia00180 Copia 1246 2651 (9356) 44 281 28.9 6.7 0.0 C04SLm0033N19.1 43934 44037 (77287) C Copia00072 Copia (3216) 4661 4551 45 518 28.9 5.2 2.2 C04SLm0033N19.1 44324 44553 (76771) + Copia00025 Copia 4239 4475 (3586) 46 403 18.4 0.0 4.6 C04SLm0033N19.1 44962 45069 (76255) + Copia00194 Copia 280 382 (9880) 47 290 11.8 0.0 0.0 C04SLm0033N19.1 46566 46616 (74708) C VANDAL13 Unknown (4468) 7679 7629 48 545 14.7 5.9 0.0 C04SLm0033N19.1 47752 47853 (73471) C Unknown00046 Unknown (7981) 2063 1956 49 33457 7.9 1.4 0.2 C04SLm0033N19.1 48651 53160 (68164) C Gypsy00074 Gypsy (5699) 8392 3830 50 560 9.4 5.2 1.0 C04SLm0033N19.1 53082 53178 (68146) C Copia00138 Copia (0) 4039 3939 51 * 286 11.5 6.4 0.0 C04SLm0033N19.1 53684 53761 (67563) + MuDR1_HV Unknown 1222 1304 (5156) 52 306 1.8 0.0 0.0 C04SLm0033N19.1 53705 53761 (67563) C Gypsy00019 Gypsy (6257) 660 604 53 274 4.1 7.8 3.9 C04SLm0033N19.1 53762 53772 (67552) + Copia00105 Copia 7494 7532 (1325) 54 483 32.4 5.4 3.6 C04SLm0033N19.1 54345 54901 (66423) + HATSOD1 Unknown 1534 2100 (2692) 55 5974 32.0 5.3 3.9 C04SLm0033N19.1 56341 60357 (60967) + ATCOPIA78_I Unknown 4 4077 (0) 56 1222 22.9 1.3 4.7 C04SLm0033N19.1 62488 62804 (58520) + TLP2 Unknown 1 306 (0) 57 1812 7.5 2.0 8.5 C04SLm0033N19.1 63838 64130 (57194) C Copia00205 Copia (4282) 5974 5701 58 37428 0.0 0.0 0.0 C04SLm0033N19.1 64132 68220 (53104) + Copia00167 Copia 1 4089 (0) 59 6200 5.4 1.6 2.9 C04SLm0033N19.1 67689 68520 (52804) C Copia00205 Copia (2317) 6506 2536 60 * 2648 21.1 4.6 4.0 C04SLm0033N19.1 68878 69524 (51800) C Copia00082 Copia (1) 4406 3756 61 1540 22.1 3.6 4.5 C04SLm0033N19.1 69539 69959 (51365) C Copia00082 Copia (617) 3790 3374 62 232 27.4 3.1 3.1 C04SLm0033N19.1 70203 70300 (51024) + ATHILA6B_I Unknown 2345 2442 (5521) 63 1612 32.0 4.8 4.9 C04SLm0033N19.1 70559 71917 (49407) + MEGY-I_MT Unknown 3669 5011 (1539) 64 408 19.6 3.8 2.9 C04SLm0033N19.1 72468 72572 (48752) + Gypsy00181 Gypsy 5975 6080 (630) 65 * 1582 17.2 3.7 2.6 C04SLm0033N19.1 72536 72886 (48438) + Unknown00048 Unknown 3672 4026 (0) 66 * 9956 16.2 0.7 2.4 C04SLm0033N19.1 72590 74502 (46822) C Gypsy00060 Gypsy (8) 5733 3852 67 * 11401 15.6 0.7 2.6 C04SLm0033N19.1 73179 75269 (46055) + Gypsy00181 Gypsy 1 2051 (4659) 68 9754 14.7 0.1 0.1 C04SLm0033N19.1 75270 76799 (44525) C Gypsy00127 Gypsy (1072) 5475 3945 69 2223 12.3 0.0 0.0 C04SLm0033N19.1 76794 77118 (44206) C Gypsy00172 Gypsy (2699) 3214 2890 70 * 4602 16.9 2.9 0.8 C04SLm0033N19.1 77120 78059 (43265) C Gypsy00180 Gypsy (2305) 11110 10152 71 268 4.2 1.3 8.9 C04SLm0033N19.1 78048 78126 (43198) C Unknown00037 Unknown (256) 4583 4511 72 * 326 6.8 8.1 0.0 C04SLm0033N19.1 78072 78145 (43179) C Copia00105 Copia (1327) 7530 7451 73 234 20.2 6.9 2.9 C04SLm0033N19.1 78170 78271 (43053) + Gypsy00152 Gypsy 5012 5117 (661) 74 284 16.9 9.1 5.7 C04SLm0033N19.1 78174 78261 (43063) C Gypsy00140 Gypsy (484) 6543 6453 75 9893 18.8 5.1 4.8 C04SLm0033N19.1 78333 82752 (38572) C Gypsy00063 Gypsy (2759) 10319 3156 76 427 23.4 1.4 0.7 C04SLm0033N19.1 82744 82881 (38443) + Gypsy00152 Gypsy 1388 1526 (4252) 77 * 654 29.9 5.7 1.7 C04SLm0033N19.1 82967 83262 (38062) + Gypsy00003 Gypsy 3366 3673 (4720) 78 310 15.9 0.0 0.0 C04SLm0033N19.1 83374 83417 (37907) C Gypsy00198 Gypsy (7561) 683 640 79 3640 22.4 3.2 3.1 C04SLm0033N19.1 83588 84785 (36539) + Gypsy00152 Gypsy 3849 5047 (731) 80 4739 17.3 1.4 0.5 C04SLm0033N19.1 83829 84779 (36545) C Gypsy00180 Gypsy (2305) 11110 10152 81 290 7.1 2.8 2.8 C04SLm0033N19.1 84768 84839 (36485) C Unknown00037 Unknown (256) 4583 4512 82 * 255 12.8 7.5 2.5 C04SLm0033N19.1 84798 84877 (36447) + Gypsy00178 Gypsy 6518 6601 (2490) 83 * 372 26.0 3.0 0.8 C04SLm0033N19.1 84896 85027 (36297) C Gypsy00140 Gypsy (484) 6543 6409 84 7425 12.5 0.9 2.5 C04SLm0033N19.1 85048 86290 (35034) C Gypsy00063 Gypsy (3330) 7596 6374 85 * 10268 18.6 2.7 2.9 C04SLm0033N19.1 86286 89187 (32137) C Gypsy00180 Gypsy (1232) 8889 5495 86 13746 12.1 0.5 0.1 C04SLm0033N19.1 89190 91240 (30084) C Gypsy00172 Gypsy (3019) 2894 837 87 12147 17.4 0.8 2.0 C04SLm0033N19.1 90253 92493 (28831) + Gypsy00187 Gypsy 3645 5859 (5) 88 * 10318 17.4 2.3 2.6 C04SLm0033N19.1 91342 93405 (27919) C Copia00153 Copia (892) 6497 4440 89 * 3981 27.5 2.6 3.3 C04SLm0033N19.1 96951 98375 (22949) C Gypsy00034 Gypsy (5541) 1464 50 90 5482 25.1 5.9 1.6 C04SLm0033N19.1 97798 98125 (23199) + Gypsy00176 Gypsy 27 1585 (6043) 91 5813 20.0 6.3 1.9 C04SLm0033N19.1 98126 99422 (21902) + GYPSODE1_LTR Unknown 728 2081 (882) 92 5482 25.1 5.9 1.6 C04SLm0033N19.1 99423 99456 (21868) + Gypsy00176 Gypsy 1586 1743 (5885) 91 4108 11.9 2.2 2.2 C04SLm0033N19.1 99458 100138 (21186) + GYPSODE1_LTR Unknown 2283 2963 (0) 93 235 13.1 2.7 17.6 C04SLm0033N19.1 100087 100160 (21164) + Copia00172 Copia 1485 1547 (5080) 94 * 992 22.6 0.9 1.3 C04SLm0033N19.1 101502 101725 (19599) C Copia00180 Copia (9777) 2230 2008 95 314 24.2 11.7 3.1 C04SLm0033N19.1 102219 102346 (18978) C Copia00180 Copia (10578) 1429 1291 95 255 23.4 1.2 5.8 C04SLm0033N19.1 102342 102427 (18897) C SIMPLEHAT2 Unknown (0) 1208 1127 96 * 268 22.3 13.1 6.9 C04SLm0033N19.1 103078 103207 (18117) C HAT1_MT Unknown (4451) 138 1 97 566 31.8 5.7 4.4 C04SLm0033N19.1 103214 103753 (17571) C Copia00194 Copia (8542) 1720 1174 98 585 31.1 4.0 4.3 C04SLm0033N19.1 103271 103643 (17681) + Copia00062 Copia 5718 6089 (797) 99 284 26.8 11.0 4.2 C04SLm0033N19.1 103771 103961 (17363) C Copia00180 Copia (11797) 210 7 100 * 381 15.5 2.7 2.7 C04SLm0033N19.1 103904 103976 (17348) C TORTL1 Unknown (95) 9600 9528 101 915 19.7 3.8 1.7 C04SLm0033N19.1 111580 111817 (9507) C SONATA1 Unknown (0) 243 1 102 334 22.3 4.0 3.2 C04SLm0033N19.1 113476 113756 (7568) C Gypsy00205 Gypsy (8839) 2473 2283 103 483 14.8 2.2 4.5 C04SLm0033N19.1 113767 113900 (7424) C Gypsy00205 Gypsy (8867) 2445 2315 104 409 25.0 6.6 2.8 C04SLm0033N19.1 115727 115907 (5417) + Unknown00046 Unknown 1878 2065 (7979) 105 7647 6.4 1.8 1.9 C04SLm0033N19.1 118012 119082 (2242) C Gypsy00107 Gypsy (993) 9906 8837 106 272 28.9 1.8 5.9 C04SLm0033N19.1 118965 119133 (2191) + Unknown00038 Unknown 4341 4502 (4605) 107 * 1224 15.8 3.6 3.6 C04SLm0033N19.1 119584 119869 (1455) + Unknown00049 Unknown 310 584 (8447) 108 1368 16.0 4.7 4.6 C04SLm0033N19.1 119966 120312 (1012) + Unknown00049 Unknown 360 652 (8379) 109