SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 373 24.1 3.0 4.2 C04HBa0304N09.1 2246 2410 (118637) C Copia00086 Copia (1) 6855 6693 1 1217 20.1 3.9 12.0 C04HBa0304N09.1 3299 3808 (117239) C Copia00172 Copia (4559) 2068 1600 2 310 34.2 0.9 4.7 C04HBa0304N09.1 6929 7140 (113907) C Unknown00041 Unknown (656) 2906 2703 3 330 33.8 0.5 4.7 C04HBa0304N09.1 8509 8722 (112325) + Unknown00041 Unknown 2703 2907 (655) 4 370 20.5 6.0 3.5 C04HBa0304N09.1 9798 9913 (111134) + Gypsy00071 Gypsy 2399 2517 (10194) 5 300 20.0 4.7 0.9 C04HBa0304N09.1 9937 10042 (111005) C SONATA2 Unknown (83) 170 61 6 239 17.4 8.2 5.5 C04HBa0304N09.1 10183 10255 (110792) + Unknown00049 Unknown 381 455 (8576) 7 229 8.8 10.3 1.7 C04HBa0304N09.1 10450 10507 (110540) + Unknown00049 Unknown 1579 1641 (7390) 8 259 27.9 3.3 2.6 C04HBa0304N09.1 10558 10708 (110339) + Unknown00049 Unknown 837 988 (8043) 9 798 25.9 0.5 0.5 C04HBa0304N09.1 10970 11186 (109861) + Unknown00049 Unknown 1020 1236 (7795) 9 232 18.8 7.6 7.6 C04HBa0304N09.1 11959 12050 (108997) + COP3_I_MT Unknown 1364 1455 (2890) 10 763 34.2 4.4 3.9 C04HBa0304N09.1 12191 13045 (108002) + ATCOPIA46_I Unknown 1363 2222 (2038) 11 850 30.9 3.2 3.4 C04HBa0304N09.1 13584 14182 (106865) + RETROFIT_I Unknown 2597 3455 (926) 12 276 29.4 5.1 6.9 C04HBa0304N09.1 14236 14284 (106763) C Copia00215 Copia (3862) 690 624 13 293 19.6 0.0 0.0 C04HBa0304N09.1 14285 14335 (106712) + SC-7 Unknown 3673 3723 (707) 14 276 29.4 5.1 6.9 C04HBa0304N09.1 14336 14410 (106637) C Copia00215 Copia (3929) 623 522 13 * 316 31.5 7.1 2.9 C04HBa0304N09.1 14340 14509 (106538) + ATCOPIA39_I Unknown 2706 2882 (400) 15 * 410 27.3 7.5 6.6 C04HBa0304N09.1 14455 14937 (106110) C Copia00071 Copia (4043) 505 78 16 295 21.7 14.6 4.2 C04HBa0304N09.1 14928 15023 (106024) + Unknown00049 Unknown 394 499 (8532) 17 * 1020 22.5 2.8 5.6 C04HBa0304N09.1 20176 20462 (100585) + Unknown00041 Unknown 2684 2962 (600) 18 350 31.5 1.9 6.2 C04HBa0304N09.1 23218 23427 (97620) + Unknown00041 Unknown 2706 2906 (656) 19 424 24.0 5.5 4.6 C04HBa0304N09.1 23958 24230 (96817) C Unknown00046 Unknown (3090) 6954 6613 20 500 23.2 16.6 3.4 C04HBa0304N09.1 24436 24640 (96407) + Gypsy00071 Gypsy 2384 2615 (10096) 21 412 7.8 0.0 0.0 C04HBa0304N09.1 24640 24716 (96331) C Copia00112 Copia (1187) 7700 7624 22 * 383 7.5 0.0 1.6 C04HBa0304N09.1 24647 24737 (96310) C MuDR1_HV Unknown (41) 1322 46 23 * 394 7.5 0.0 0.0 C04HBa0304N09.1 25565 25617 (95430) + Copia00078 Copia 2981 3033 (0) 24 21376 8.7 0.8 0.7 C04HBa0304N09.1 25881 28908 (92139) + Copia00078 Copia 2 3033 (0) 25 2286 14.5 0.3 0.8 C04HBa0304N09.1 29179 29566 (91481) + Copia00078 Copia 9 394 (2639) 26 505 34.8 3.1 2.8 C04HBa0304N09.1 29737 30340 (90707) C Copia00086 Copia (5319) 1537 932 27 1128 18.1 5.5 13.5 C04HBa0304N09.1 33117 33531 (87516) C Copia00172 Copia (4559) 2068 1687 28 316 32.7 1.0 4.8 C04HBa0304N09.1 38121 38329 (82718) + Unknown00041 Unknown 2706 2906 (656) 29 774 24.8 5.6 4.1 C04HBa0304N09.1 38854 39193 (81854) C Unknown00046 Unknown (3087) 6957 6613 30 236 18.5 0.0 5.8 C04HBa0304N09.1 39533 39555 (81492) + Gypsy00071 Gypsy 2551 2615 (10096) 31 269 10.9 2.2 0.0 C04HBa0304N09.1 39556 39601 (81446) C SONATA2 Unknown (84) 169 123 32 * 408 13.0 0.0 1.1 C04HBa0304N09.1 39580 39672 (81375) + Unknown00002 Unknown 9768 9859 (122) 33 * 513 12.0 0.0 0.0 C04HBa0304N09.1 39601 39700 (81347) C Gypsy00042 Gypsy (1419) 6079 5980 34 238 6.8 1.7 0.0 C04HBa0304N09.1 39659 39717 (81330) + Copia00105 Copia 7485 7544 (1313) 35 * 362 7.8 0.0 0.0 C04HBa0304N09.1 40657 40707 (80340) + Copia00078 Copia 2983 3033 (0) 36 276 27.9 7.3 7.0 C04HBa0304N09.1 40907 41319 (79728) + TOTO1_LP_I Unknown 2642 3055 (474) 37 * 4188 10.2 0.0 0.0 C04HBa0304N09.1 40971 41565 (79482) + Copia00078 Copia 2 596 (2437) 38 * 6219 8.1 0.1 0.4 C04HBa0304N09.1 41555 42458 (78589) + Copia00078 Copia 744 1705 (1328) 38 805 7.6 0.0 0.0 C04HBa0304N09.1 42454 42558 (78489) + Copia00078 Copia 2475 2579 (454) 38 * 60224 9.4 1.6 3.4 C04HBa0304N09.1 42559 51675 (69372) C Gypsy00073 Gypsy (238) 11846 2894 39 3470 7.7 0.0 0.2 C04HBa0304N09.1 51674 52132 (68915) + Copia00078 Copia 2575 3032 (1) 38 * 2410 12.9 0.0 0.2 C04HBa0304N09.1 52396 52790 (68257) + Copia00078 Copia 2 395 (2638) 40 366 23.4 3.4 5.1 C04HBa0304N09.1 55174 55349 (65698) C Copia00086 Copia (1) 6855 6683 41 325 23.8 4.7 1.9 C04HBa0304N09.1 56487 56593 (64454) C Copia00172 Copia (4559) 2068 1959 42 292 33.5 1.1 5.0 C04HBa0304N09.1 60219 60397 (60650) C Unknown00041 Unknown (688) 2874 2703 43 285 30.8 0.7 6.3 C04HBa0304N09.1 62108 62249 (58798) + Unknown00041 Unknown 2703 2836 (726) 44 356 33.5 0.5 4.7 C04HBa0304N09.1 63295 63507 (57540) + Unknown00041 Unknown 2703 2906 (656) 45 938 23.5 4.2 3.6 C04HBa0304N09.1 64074 64409 (56638) C Unknown00046 Unknown (3088) 6956 6619 46 355 19.6 4.1 1.0 C04HBa0304N09.1 64795 64892 (56155) C SONATA2 Unknown (83) 170 70 47 336 22.6 16.8 3.4 C04HBa0304N09.1 65020 65138 (55909) + Unknown00049 Unknown 365 499 (8532) 48 1168 25.3 4.7 5.5 C04HBa0304N09.1 65316 65822 (55225) + Unknown00049 Unknown 734 1236 (7795) 48 626 22.0 1.4 1.4 C04HBa0304N09.1 66015 66157 (54890) + Unknown00049 Unknown 1255 1397 (7634) 48 583 35.0 3.0 3.7 C04HBa0304N09.1 66651 67345 (53702) + ATCOPIA46_I Unknown 1184 1873 (2387) 49 57705 10.9 1.7 2.7 C04HBa0304N09.1 70036 79098 (41949) C Gypsy00073 Gypsy (223) 11861 2895 50 456 24.2 5.4 1.8 C04HBa0304N09.1 80279 80446 (40601) C Copia00086 Copia (1) 6855 6682 51 368 19.4 8.0 14.0 C04HBa0304N09.1 81526 81675 (39372) C Copia00172 Copia (4530) 2097 1957 52 * 1093 14.8 7.5 3.4 C04HBa0304N09.1 81654 81918 (39129) C Copia00172 Copia (4603) 2024 1749 52 313 30.1 0.7 6.3 C04HBa0304N09.1 85194 85335 (35712) C Unknown00041 Unknown (726) 2836 2703 53 331 33.3 0.9 4.7 C04HBa0304N09.1 86989 87199 (33848) + Unknown00041 Unknown 2704 2906 (656) 54 783 26.8 5.0 2.6 C04HBa0304N09.1 87712 88052 (32995) C Unknown00046 Unknown (3080) 6964 6616 55 308 19.4 11.7 1.1 C04HBa0304N09.1 88406 88499 (32548) C SONATA2 Unknown (37) 216 113 56 * 397 11.1 0.0 5.8 C04HBa0304N09.1 88422 88507 (32540) + Gypsy00071 Gypsy 2553 2633 (10078) 57 226 11.1 2.4 1.2 C04HBa0304N09.1 88571 88585 (32462) + GYCUME1_LTR Unknown 338 420 (2226) 58 236 7.5 3.0 0.0 C04HBa0304N09.1 88586 88652 (32395) + Gypsy00019 Gypsy 587 655 (6262) 59 * 268 3.6 1.8 0.0 C04HBa0304N09.1 88600 88654 (32393) C Gypsy00046 Gypsy (6934) 4137 4082 60 260 12.5 12.5 0.0 C04HBa0304N09.1 88655 88671 (32376) C Copia00112 Copia (1220) 7667 7587 61 237 36.5 3.5 3.9 C04HBa0304N09.1 89165 89446 (31601) + ATCOPIA72_I Unknown 4123 4403 (80) 62 * 387 26.0 3.6 3.2 C04HBa0304N09.1 89318 89527 (31520) + Copia00125 Copia 3839 4376 (24) 63 266 23.8 17.1 3.8 C04HBa0304N09.1 89521 89625 (31422) + Unknown00049 Unknown 381 499 (8532) 64 * 1084 27.4 5.0 3.3 C04HBa0304N09.1 93361 93997 (27050) + Unknown00006 Unknown 5054 5559 (5031) 65 1872 16.3 1.5 6.6 C04HBa0304N09.1 94047 94441 (26606) + Unknown00006 Unknown 6002 6376 (4214) 66 * 5281 31.9 3.8 3.6 C04HBa0304N09.1 94196 97526 (23521) + Gypsy00109 Gypsy 3355 6693 (3885) 67 8788 16.0 0.2 2.1 C04HBa0304N09.1 97548 99128 (21919) + Unknown00006 Unknown 6352 7903 (2687) 68 281 18.6 0.0 6.7 C04HBa0304N09.1 100982 101056 (19991) C Copia00158 Copia (4235) 83 14 69 1747 31.8 3.2 2.9 C04HBa0304N09.1 101880 102931 (18116) + Copia00212 Copia 1 1114 (7223) 70 226 32.0 5.6 4.3 C04HBa0304N09.1 103049 103280 (17767) C Copia00062 Copia (925) 5961 5727 71 * 1006 30.4 4.1 6.9 C04HBa0304N09.1 103253 104342 (16705) + Copia00025 Copia 1244 2228 (5833) 72 * 1018 18.6 3.3 0.9 C04HBa0304N09.1 104139 104350 (16697) C Copia00158 Copia (1999) 2319 2103 73 263 33.3 6.0 4.3 C04HBa0304N09.1 104434 104665 (16382) C Copia00062 Copia (2387) 4499 4264 71 229 19.5 0.0 0.0 C04HBa0304N09.1 105097 105137 (15910) + Copia00043 Copia 3810 3850 (4219) 74 455 32.2 1.0 4.0 C04HBa0304N09.1 105141 105441 (15606) + Copia00212 Copia 4380 4671 (3502) 75 512 30.8 4.1 2.1 C04HBa0304N09.1 105754 106020 (15027) + Copia00212 Copia 4479 5120 (1564) 76 334 14.3 0.0 6.7 C04HBa0304N09.1 106154 106228 (14819) C Copia00158 Copia (4235) 83 14 77 1090 21.9 3.2 4.1 C04HBa0304N09.1 107033 107375 (13672) + Copia00194 Copia 152 491 (9771) 78 274 32.5 0.0 0.0 C04HBa0304N09.1 110032 110108 (10939) + Unknown00043 Unknown 1962 2038 (9286) 79 285 13.3 9.7 3.2 C04HBa0304N09.1 110368 110429 (10618) C TS2 Unknown (5) 650 585 80 287 22.7 0.0 0.0 C04HBa0304N09.1 110629 110694 (10353) C TS2 Unknown (318) 337 272 81 3807 31.0 7.3 6.6 C04HBa0304N09.1 111161 115646 (5401) C Copia00061 Copia (0) 5170 178 82 4260 30.8 5.1 5.4 C04HBa0304N09.1 111253 114292 (6755) + Copia00045 Copia 1 3030 (1641) 83 508 19.6 5.0 8.1 C04HBa0304N09.1 116424 116584 (4463) C Unknown00046 Unknown (9720) 324 169 84 16933 19.2 2.6 2.9 C04HBa0304N09.1 117513 121046 (1) + Copia00195 Copia 8 3531 (946) 85