SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 510 30.8 5.8 3.2 C04HBa0213A03.1 6210 6518 (111931) + RTE1_MT Unknown 2559 2875 (280) 1 * 655 25.5 1.6 4.5 C04HBa0213A03.1 6506 6751 (111698) + TS2 Unknown 99 337 (318) 2 460 21.7 2.5 3.1 C04HBa0213A03.1 6874 7024 (111425) + TS Unknown 59 2039 (2) 3 554 16.1 0.9 0.9 C04HBa0213A03.1 9398 9510 (108939) C SONATA2 Unknown (0) 253 141 4 243 9.9 2.2 10.0 C04HBa0213A03.1 10725 10742 (107707) C SHAMUDRAV_MT Unknown (5178) 1628 1551 5 289 6.0 4.5 0.0 C04HBa0213A03.1 10743 10809 (107640) C Gypsy00019 Gypsy (6240) 677 608 6 258 8.0 3.9 3.9 C04HBa0213A03.1 10764 10841 (107608) + Copia00105 Copia 7486 7563 (1294) 7 * 1524 18.7 3.1 0.0 C04HBa0213A03.1 20322 20615 (97834) + Copia00151 Copia 5513 5815 (4946) 8 338 32.6 6.2 4.2 C04HBa0213A03.1 21914 22412 (96037) + Copia00125 Copia 1370 1878 (2187) 9 316 34.1 5.8 5.1 C04HBa0213A03.1 21992 22613 (95836) + SC-5 Unknown 729 1354 (2416) 10 * 1313 13.7 0.8 3.0 C04HBa0213A03.1 25815 26048 (92401) C Copia00172 Copia (6113) 514 286 11 416 23.2 10.6 2.8 C04HBa0213A03.1 26161 26302 (92147) + TS2 Unknown 503 655 (0) 12 1484 10.1 1.3 0.0 C04HBa0213A03.1 27026 27252 (91197) C SONATA1 Unknown (0) 243 14 13 1158 19.1 0.8 0.4 C04HBa0213A03.1 28780 29021 (89428) + SONATA1 Unknown 1 243 (0) 14 453 22.5 2.6 2.6 C04HBa0213A03.1 29288 29401 (89048) + Unknown00043 Unknown 1924 2037 (9287) 15 251 20.0 28.5 1.5 C04HBa0213A03.1 30345 30481 (87968) C Unknown00050 Unknown (2148) 3483 3310 16 451 27.5 5.3 0.0 C04HBa0213A03.1 31553 31683 (86766) + Copia00151 Copia 10036 10173 (588) 17 * 638 16.4 1.0 0.0 C04HBa0213A03.1 31581 31684 (86765) + TS2 Unknown 550 654 (1) 18 2301 14.2 1.6 1.3 C04HBa0213A03.1 36594 36977 (81472) + Copia00172 Copia 1105 1489 (5138) 19 398 24.0 4.0 0.0 C04HBa0213A03.1 37593 37606 (80843) C Copia00110 Copia (11404) 2728 2630 20 457 17.3 0.0 0.0 C04HBa0213A03.1 37607 37687 (80762) C TLP1 Unknown (376) 286 206 21 * 916 22.9 0.0 1.5 C04HBa0213A03.1 37675 37878 (80571) + Unknown00046 Unknown 2644 2844 (7200) 22 412 23.4 3.4 4.1 C04HBa0213A03.1 43633 43779 (74670) + Unknown00043 Unknown 5297 5442 (5882) 23 295 13.3 1.1 5.3 C04HBa0213A03.1 44132 44226 (74223) + HELMET3 Unknown 3705 3795 (2778) 24 998 21.3 1.7 0.4 C04HBa0213A03.1 47052 47287 (71162) C SONATA1 Unknown (4) 239 1 25 2223 28.1 3.1 4.7 C04HBa0213A03.1 48344 49357 (69092) C TS2 Unknown (4) 2965 3 26 269 18.8 1.5 1.5 C04HBa0213A03.1 49846 49910 (68539) C Unknown00043 Unknown (9281) 2043 1979 27 616 21.1 0.0 3.1 C04HBa0213A03.1 51093 51219 (67230) + Copia00172 Copia 5190 5312 (1315) 28 1132 7.0 0.0 0.0 C04HBa0213A03.1 56438 56579 (61870) + Copia00143 Copia 77 218 (5086) 29 * 1240 9.1 9.2 9.2 C04HBa0213A03.1 56568 56784 (61665) + Copia00143 Copia 1 217 (5087) 30 268 16.0 4.0 0.0 C04HBa0213A03.1 56857 56931 (61518) C Copia00112 Copia (1185) 7702 7625 31 572 18.8 2.0 2.0 C04HBa0213A03.1 57974 58120 (60329) + Unknown00046 Unknown 364 510 (9534) 32 274 11.7 4.9 1.6 C04HBa0213A03.1 58284 58344 (60105) C SC-5 Unknown (100) 3670 3608 33 * 527 27.2 4.0 4.9 C04HBa0213A03.1 58300 58546 (59903) + Copia00133 Copia 45 289 (4430) 34 517 32.5 6.2 0.6 C04HBa0213A03.1 58538 58862 (59587) C Copia00125 Copia (1099) 2966 2624 35 * 295 33.2 4.9 2.3 C04HBa0213A03.1 58541 58949 (59500) C COPIA2-I_OS Unknown (1350) 3710 2540 36 * 1676 29.1 6.3 5.1 C04HBa0213A03.1 59921 61164 (57285) C Unknown00056 Unknown (2000) 3109 1851 37 1656 23.7 6.8 2.9 C04HBa0213A03.1 61267 61983 (56466) C Unknown00054 Unknown (4533) 958 214 38 1483 14.2 1.0 5.8 C04HBa0213A03.1 61980 62292 (56157) C Unknown00056 Unknown (4207) 902 605 39 * 1911 17.9 0.5 2.0 C04HBa0213A03.1 62286 62683 (55766) + Unknown00002 Unknown 181 572 (9409) 40 * 2313 24.8 3.9 2.8 C04HBa0213A03.1 62682 63609 (54840) + Unknown00056 Unknown 911 1848 (3261) 41 787 19.8 4.6 4.6 C04HBa0213A03.1 63638 63896 (54553) + Unknown00054 Unknown 972 1230 (4261) 42 253 25.9 3.4 4.3 C04HBa0213A03.1 63898 64014 (54435) + Unknown00056 Unknown 2223 2338 (2771) 41 1692 25.8 2.5 3.8 C04HBa0213A03.1 64107 64715 (53734) + Unknown00056 Unknown 2507 3107 (2002) 41 889 32.0 2.4 2.4 C04HBa0213A03.1 67202 67665 (50784) C SHACOP11_I_MT Unknown (0) 4392 3929 43 11827 15.1 2.6 2.9 C04HBa0213A03.1 67689 69965 (48484) C Unknown00025 Unknown (1739) 4569 2299 44 1458 29.5 1.4 2.2 C04HBa0213A03.1 69960 70510 (47939) C COP14_I_MT Unknown (998) 2963 2417 45 * 328 9.6 14.6 6.7 C04HBa0213A03.1 79778 79866 (38583) C TOTO1_LP_I Unknown (433) 3096 3001 46 232 8.8 0.0 0.0 C04HBa0213A03.1 80115 80148 (38301) C DEM1_LTR Unknown (1405) 1368 1335 47 270 11.9 0.0 0.0 C04HBa0213A03.1 81136 81177 (37272) + Copia00089 Copia 1775 1816 (9640) 48 1125 25.5 9.0 5.3 C04HBa0213A03.1 87517 88137 (30312) + Copia00089 Copia 2349 2992 (8464) 49 673 20.9 2.8 8.1 C04HBa0213A03.1 88766 89104 (29345) C Copia00212 Copia (7947) 486 8 50 270 30.9 1.8 0.9 C04HBa0213A03.1 90191 90301 (28148) + TS2 Unknown 4 115 (540) 51 2397 7.3 1.0 0.0 C04HBa0213A03.1 92150 92462 (25987) + Unknown00034 Unknown 3702 4017 (5060) 52 833 17.1 2.9 8.3 C04HBa0213A03.1 93049 93252 (25197) + Unknown00046 Unknown 1869 2061 (7983) 53 1905 15.0 2.2 0.0 C04HBa0213A03.1 95256 95575 (22874) C Unknown00034 Unknown (5068) 4009 3683 54 809 17.2 1.1 7.9 C04HBa0213A03.1 96350 96538 (21911) C Unknown00046 Unknown (9656) 388 213 55 723 12.1 2.4 10.2 C04HBa0213A03.1 96416 96581 (21868) + Unknown00046 Unknown 367 519 (9525) 56 * 679 10.5 1.6 8.8 C04HBa0213A03.1 97728 97852 (20597) + Unknown00034 Unknown 3704 3819 (5258) 57 296 8.1 1.9 2.1 C04HBa0213A03.1 99615 99722 (18727) + Copia00105 Copia 7453 7690 (1197) 58 * 317 10.2 1.1 0.0 C04HBa0213A03.1 99655 99742 (18707) C Gypsy00046 Gypsy (6908) 4163 4075 59 * 337 20.0 0.0 1.2 C04HBa0213A03.1 99736 99816 (18633) + Unknown00034 Unknown 5146 5225 (3852) 60 921 14.4 2.9 8.3 C04HBa0213A03.1 103100 103303 (15146) + Unknown00046 Unknown 1869 2061 (7983) 61 345 28.4 5.7 5.7 C04HBa0213A03.1 107418 107645 (10804) C RETROFIT6_I Unknown (2512) 1879 1652 62 676 10.9 0.0 0.0 C04HBa0213A03.1 107831 107931 (10518) + Copia00209 Copia 4040 4140 (0) 63 27584 9.9 1.6 0.7 C04HBa0213A03.1 108095 112197 (6252) + Copia00209 Copia 1 4140 (0) 64 249 9.1 2.3 0.0 C04HBa0213A03.1 112322 112365 (6084) + Copia00042 Copia 1774 1818 (3225) 65 371 26.1 0.0 5.7 C04HBa0213A03.1 112819 112940 (5509) + TS2 Unknown 1 115 (540) 66 2434 6.2 0.3 6.3 C04HBa0213A03.1 113824 114185 (4264) + Unknown00040 Unknown 4341 4680 (2) 67 * 3387 14.0 2.2 6.8 C04HBa0213A03.1 113945 114665 (3784) C Copia00110 Copia (11721) 2411 1724 68 * 22377 5.7 0.6 1.7 C04HBa0213A03.1 114531 117758 (691) + Unknown00059 Unknown 1 3065 (1348) 69 5810 4.5 0.0 0.0 C04HBa0213A03.1 117741 118449 (0) + Unknown00022 Unknown 1663 2371 (425) 70 *