SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1937 21.9 1.5 1.5 C04HBa0006E18.1 13 692 (119345) C Unknown00002 Unknown (4373) 1945 1 1 * 4795 24.3 6.5 6.9 C04HBa0006E18.1 308 2664 (117373) + Unknown00016 Unknown 1 2349 (2632) 2 8123 22.1 2.4 3.7 C04HBa0006E18.1 2714 4972 (115065) + Gypsy00025 Gypsy 4698 6927 (1399) 3 310 20.3 2.5 9.7 C04HBa0006E18.1 5025 5220 (114817) C Gypsy00046 Gypsy (10737) 334 153 4 * 4193 24.2 4.4 3.9 C04HBa0006E18.1 5068 6773 (113264) + Gypsy00177 Gypsy 6250 7963 (2342) 5 3652 24.7 5.8 5.9 C04HBa0006E18.1 5160 7135 (112902) + Unknown00025 Unknown 3546 5518 (790) 6 * 712 21.4 0.6 2.8 C04HBa0006E18.1 6979 7156 (112881) + Gypsy00177 Gypsy 8234 8407 (1898) 5 * 4686 19.3 1.9 1.4 C04HBa0006E18.1 7307 8332 (111705) + Gypsy00086 Gypsy 5 1035 (6448) 7 1122 16.1 2.5 2.0 C04HBa0006E18.1 8306 8508 (111529) + Gypsy00011 Gypsy 4912 5115 (2897) 8 * 287 1.2 0.0 1.7 C04HBa0006E18.1 9392 9460 (110577) + STOWAWAY50_OS Unknown 82 6369 (38) 9 286 11.4 5.7 0.0 C04HBa0006E18.1 9406 9475 (110562) C Gypsy00046 Gypsy (6942) 4129 4056 10 * 245 24.3 6.3 12.1 C04HBa0006E18.1 9497 9702 (110335) C Gypsy00177 Gypsy (5711) 4594 4401 11 225 22.4 11.4 9.5 C04HBa0006E18.1 9561 9718 (110319) + Gypsy00131 Gypsy 7800 7960 (273) 12 * 228 16.4 7.9 3.2 C04HBa0006E18.1 9853 9915 (110122) C Gypsy00197 Gypsy (140) 8801 8736 13 626 27.5 4.6 3.7 C04HBa0006E18.1 10204 10554 (109483) + Unknown00016 Unknown 4283 4636 (345) 14 * 4855 24.6 5.5 6.1 C04HBa0006E18.1 10249 14043 (105994) C Unknown00056 Unknown (3) 4666 1 15 2052 26.4 1.7 0.4 C04HBa0006E18.1 14044 14666 (105371) C Gypsy00007 Gypsy (2557) 5375 3125 16 928 27.7 2.1 1.8 C04HBa0006E18.1 14666 14996 (105041) C Gypsy00160 Gypsy (3131) 3314 2983 17 * 1389 17.8 4.5 3.6 C04HBa0006E18.1 15003 15421 (104616) C Unknown00045 Unknown (2484) 2040 1618 18 1719 16.1 1.7 4.3 C04HBa0006E18.1 15442 15791 (104246) + Unknown00045 Unknown 3931 4271 (253) 19 4596 18.7 0.8 1.4 C04HBa0006E18.1 15980 16968 (103069) + Unknown00045 Unknown 6 988 (3536) 20 1486 19.4 8.7 5.5 C04HBa0006E18.1 16984 17420 (102617) + Gypsy00033 Gypsy 7190 7640 (3355) 21 * 2840 18.9 2.3 2.2 C04HBa0006E18.1 17390 18646 (101391) + Unknown00045 Unknown 1363 4758 (733) 20 6110 22.1 2.3 2.7 C04HBa0006E18.1 18758 20562 (99475) + Unknown00056 Unknown 93 1889 (3220) 22 3184 23.7 3.1 5.9 C04HBa0006E18.1 20590 21710 (98327) C Unknown00045 Unknown (3431) 1093 4 23 2016 26.2 3.3 3.4 C04HBa0006E18.1 21625 22828 (97209) C Gypsy00033 Gypsy (4675) 6320 5071 24 * 2920 23.0 1.1 1.0 C04HBa0006E18.1 22481 23296 (96741) C Unknown00045 Unknown (248) 4276 3460 25 2576 23.4 2.7 2.1 C04HBa0006E18.1 24140 24955 (95082) C Unknown00045 Unknown (2261) 2263 1443 25 276 25.0 2.1 1.0 C04HBa0006E18.1 25058 25154 (94883) C Unknown00016 Unknown (3228) 1753 1656 26 3729 21.9 3.4 4.5 C04HBa0006E18.1 25451 26549 (93488) C Unknown00045 Unknown (3431) 1093 8 25 1061 27.1 4.7 2.2 C04HBa0006E18.1 26373 26920 (93117) C Gypsy00033 Gypsy (4569) 6426 5865 27 * 10221 14.4 0.7 1.8 C04HBa0006E18.1 26927 28704 (91333) C Gypsy00163 Gypsy (6652) 2095 338 28 9953 17.1 4.5 1.8 C04HBa0006E18.1 28693 31117 (88920) C Gypsy00059 Gypsy (5422) 3039 545 29 * 11061 18.1 2.7 3.2 C04HBa0006E18.1 30481 32961 (87076) + Gypsy00123 Gypsy 463 2930 (4817) 30 8491 11.8 0.7 1.7 C04HBa0006E18.1 32926 34298 (85739) C Gypsy00058 Gypsy (60) 7630 6272 31 * 8421 14.9 1.2 0.7 C04HBa0006E18.1 32941 34489 (85548) + Gypsy00168 Gypsy 1 1558 (6624) 32 * 261 20.4 0.0 0.0 C04HBa0006E18.1 34498 34546 (85491) C Gypsy00027 Gypsy (563) 7369 7321 33 2276 27.5 1.2 2.8 C04HBa0006E18.1 34551 35349 (84688) C Gypsy00033 Gypsy (5138) 5857 5071 34 238 25.8 0.0 1.5 C04HBa0006E18.1 35399 35465 (84572) C Gypsy00147 Gypsy (4276) 3474 3409 35 306 27.9 5.8 1.8 C04HBa0006E18.1 37574 37794 (82243) C Unknown00002 Unknown (1885) 8096 853 36 328 23.2 1.0 2.1 C04HBa0006E18.1 37622 37718 (82319) + Unknown00016 Unknown 4332 4427 (554) 37 300 14.6 0.0 3.5 C04HBa0006E18.1 37795 37851 (82186) + Gypsy00198 Gypsy 5599 5653 (2591) 38 * 344 23.5 13.1 3.6 C04HBa0006E18.1 37801 37937 (82100) C Gypsy00046 Gypsy (10063) 1008 859 39 1076 19.3 8.4 1.8 C04HBa0006E18.1 40405 40689 (79348) + Unknown00016 Unknown 2226 2529 (2452) 40 610 23.4 8.6 9.2 C04HBa0006E18.1 40547 40884 (79153) + Gypsy00042 Gypsy 313 648 (6850) 41 * 234 28.1 1.0 1.0 C04HBa0006E18.1 40997 41093 (78944) C Unknown00054 Unknown (1806) 3685 3589 42 11807 18.1 3.0 1.4 C04HBa0006E18.1 41099 43667 (76370) + Unknown00002 Unknown 4373 6981 (3000) 43 314 27.3 4.1 0.0 C04HBa0006E18.1 43624 43744 (76293) + Gypsy00177 Gypsy 10138 10263 (42) 44 * 231 6.1 0.0 0.0 C04HBa0006E18.1 43953 43985 (76052) + Unknown00054 Unknown 630 662 (4829) 45 3437 26.1 5.9 2.1 C04HBa0006E18.1 44410 45580 (74457) + Unknown00002 Unknown 6995 8209 (1772) 43 280 25.3 2.7 0.0 C04HBa0006E18.1 45578 45652 (74385) C Gypsy00003 Gypsy (3899) 4494 4418 46 * 22447 22.9 5.8 6.2 C04HBa0006E18.1 47737 54913 (65124) C Gypsy00114 Gypsy (786) 7156 9 47 11176 17.6 4.6 5.0 C04HBa0006E18.1 53439 56061 (63976) + Unknown00037 Unknown 144 2756 (2083) 48 * 2276 27.5 5.3 4.6 C04HBa0006E18.1 56215 57354 (62683) + Unknown00002 Unknown 7007 8155 (1826) 49 * 17940 14.8 1.9 2.1 C04HBa0006E18.1 57353 60518 (59519) + Gypsy00147 Gypsy 920 4080 (3670) 50 * 27037 17.1 2.3 2.2 C04HBa0006E18.1 59519 64921 (55116) C Gypsy00142 Gypsy (2654) 5411 1 51 9321 22.4 2.7 2.4 C04HBa0006E18.1 63305 65855 (54182) C Unknown00038 Unknown (5703) 3404 846 52 * 1248 24.1 6.5 4.7 C04HBa0006E18.1 65836 66837 (53200) + Unknown00002 Unknown 2777 8209 (1772) 53 * 2160 17.9 0.5 0.5 C04HBa0006E18.1 66839 67232 (52805) C Gypsy00086 Gypsy (7087) 396 3 54 2137 20.2 1.6 3.1 C04HBa0006E18.1 67515 68090 (51947) + Gypsy00197 Gypsy 715 1281 (7660) 55 1689 28.5 3.2 2.9 C04HBa0006E18.1 67714 68682 (51355) C Gypsy00177 Gypsy (329) 7736 5248 56 * 340 18.3 7.5 1.9 C04HBa0006E18.1 75009 75114 (44923) C SONATA3 Unknown (128) 119 8 57 3927 16.0 1.8 2.8 C04HBa0006E18.1 75374 76093 (43944) + Gypsy00034 Gypsy 397 1109 (5896) 58 17407 9.4 2.4 2.7 C04HBa0006E18.1 76100 78879 (41158) C Gypsy00151 Gypsy (5394) 6255 3485 59 10655 13.6 2.3 1.8 C04HBa0006E18.1 77600 79617 (40420) + Copia00112 Copia 5625 7652 (1235) 60 * 7040 11.8 1.6 2.7 C04HBa0006E18.1 78991 80169 (39868) C Gypsy00151 Gypsy (8143) 3506 2341 59 * 376 7.5 0.0 0.0 C04HBa0006E18.1 80167 80219 (39818) C Gypsy00176 Gypsy (5095) 2533 2481 61 * 26276 11.4 0.7 0.3 C04HBa0006E18.1 80217 84054 (35983) C Gypsy00176 Gypsy (1159) 6469 2617 62 10590 15.4 1.1 2.1 C04HBa0006E18.1 84046 85932 (34105) C Gypsy00034 Gypsy (5082) 1923 55 63 * 11431 11.2 2.3 0.3 C04HBa0006E18.1 85330 87063 (32974) + Gypsy00176 Gypsy 1 1768 (5860) 64 10152 19.0 2.7 1.7 C04HBa0006E18.1 85685 87898 (32139) + GYPSODE1_LTR Unknown 727 2963 (0) 65 * 1866 24.0 4.6 4.2 C04HBa0006E18.1 94769 95638 (24399) + Copia00144 Copia 5532 6404 (59) 66 1183 24.2 3.5 3.8 C04HBa0006E18.1 96344 96971 (23066) C Copia00183 Copia (4333) 1254 629 67 1273 29.0 4.8 4.0 C04HBa0006E18.1 96994 97941 (22096) C Unknown00052 Unknown (3655) 1014 59 68 * 1538 25.4 2.6 2.4 C04HBa0006E18.1 97766 98379 (21658) + Gypsy00033 Gypsy 5872 6486 (4509) 69 * 3488 21.8 2.7 3.4 C04HBa0006E18.1 98129 99124 (20913) + Unknown00045 Unknown 4 992 (3532) 70 5729 21.2 2.6 3.5 C04HBa0006E18.1 99417 101100 (18937) + Unknown00045 Unknown 1133 2900 (1624) 70 7626 12.8 2.1 0.8 C04HBa0006E18.1 101105 102391 (17646) C Gypsy00018 Gypsy (6645) 1304 1 71 * 19150 13.3 2.4 1.8 C04HBa0006E18.1 101255 104527 (15510) + Gypsy00091 Gypsy 2 3293 (5254) 72 3241 16.2 0.7 1.4 C04HBa0006E18.1 104526 105096 (14941) + Gypsy00091 Gypsy 2651 3217 (5330) 73 * 1474 15.2 0.4 0.0 C04HBa0006E18.1 105100 105342 (14695) + Unknown00045 Unknown 2899 3142 (1382) 70 306 30.5 6.4 9.8 C04HBa0006E18.1 105264 105700 (14337) C Unknown00002 Unknown (5599) 4382 3961 74 * 2316 25.2 5.0 5.6 C04HBa0006E18.1 105393 106436 (13601) + Unknown00045 Unknown 3143 4180 (344) 75 2119 26.7 7.9 6.5 C04HBa0006E18.1 106470 108825 (11212) C Gypsy00114 Gypsy (5455) 2487 689 76 1102 19.9 3.6 3.2 C04HBa0006E18.1 108616 108896 (11141) C Unknown00050 Unknown (639) 4992 4711 77 * 850 19.6 14.7 0.8 C04HBa0006E18.1 108681 108932 (11105) + Gypsy00063 Gypsy 6210 6496 (4430) 78 * 307 23.9 9.0 2.3 C04HBa0006E18.1 108818 108950 (11087) C Gypsy00059 Gypsy (7898) 563 422 79 * 6715 19.3 3.9 2.9 C04HBa0006E18.1 109099 110767 (9270) C Gypsy00003 Gypsy (1704) 6689 1 80 244 11.6 2.3 0.0 C04HBa0006E18.1 110768 110810 (9227) + Gypsy00038 Gypsy 5238 5281 (2437) 81 * 1005 27.1 5.3 4.3 C04HBa0006E18.1 110776 111383 (8654) C Unknown00052 Unknown (3946) 723 110 82 * 1562 25.2 3.5 2.3 C04HBa0006E18.1 111259 111860 (8177) + Gypsy00033 Gypsy 5872 6480 (4515) 83 * 3825 24.0 7.1 5.9 C04HBa0006E18.1 111622 113638 (6399) + Unknown00045 Unknown 4 2045 (2479) 84 460 19.3 1.4 7.5 C04HBa0006E18.1 113981 114126 (5911) + Copia00110 Copia 10878 11014 (3118) 85 558 34.4 0.0 0.8 C04HBa0006E18.1 119133 119387 (650) + PIGY-I_PS Unknown 4173 4425 (4823) 86 481 30.1 6.4 4.1 C04HBa0006E18.1 119388 119600 (437) + Gypsy00066 Gypsy 6618 7096 (5212) 87