<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 23:58:50"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328094" ref_strand="+" ref_description="SGN-U328094        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-65, score=251)">
      <seq>cctctgtaagaatagtgtgaatcaaatcgtcggcacggggtacacatacctttcccttaatcctcaaaacaccttccttatcgatttttgcttctttagcctctcctcgcattaccttatctcgaatccagatcagtttctcatcggtaaactgctttcctttaatcttatcaagaaaggaagatcttgcctccacacaagccaaaaattctcccttctcatttaattctagcctcataaggtcattagccagagtctgaacctctctagccaatgggcatctagaaacctgcaagtgagctagacttcccatgctccctgcctttctacttaaagcatctgccacaacattagcctttcccggatgatacaagatagtgatatcatagtccttcagtagctccatcgatctcctctgtctcaaattcaaatctttctgagtaaagacatactgtaaactacgatgatccatatagacttcacacttaaccccatagagataatgtctctattactttaatgcaatcactactgccgctaactccaaatcatgggtcggataattacgttcatgcacctttaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="8340" stop="9525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8640" g_stop="9225" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U328094" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8640" e_stop="9225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTGTAAGAATAGTGTGAATCAAATCATCGACGCGGGGTACACATACCCTTCCCTTAATTCTCAAAACACCTTTCTCATCAATTTTTGCTTCTTTAGCCTCTCCACGCGATACCTTATCTCGAATCCGGATCAGTTTCTCATCAGTAAACTGCTTTCCCTTAATCTTGTCAAGAAAGGAAGATCTTGCCTCCACACAGGCCAAAAATCCTCCCTTCTCTAGTACTTCCAGCCTCATATAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAATGAGCGTTTAGAAACCTGCAAGTGAGCTAGACTTCCCATGCTTCATGCCTTTCTATTTAAAGCATCCGCCACAACA-TAGCCTTTCCCGGATGATACAAGATAGTGATATCATAGTCCTTTAGTAGTTCCATCCACCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGACATACTGTAAACTACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCCATTGCTTTAATGCAAACACTACTGCAGCCAACTCCAAATCGTGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</genome_strand>
        <mrna_strand>CCTCTGTAAGAATAGTGTGAATCAAATCGTCGGCACGGGGTACACATACCTTTCCCTTAATCCTCAAAACACCTTCCTTATCGATTTTTGCTTCTTTAGCCTCTCCTCGCATTACCTTATCTCGAATCCAGATCAGTTTCTCATCGGTAAACTGCTTTCCTTTAATCTTATCAAGAAAGGAAGATCTTGCCTCCACACAAGCCAAAAATTCTCCCTTCTCATTTAATTCTAGCCTCATAAGGTCATTAGCCAGAGTCTGAACCTCTCTAGCCAATGGGCATCTAGAAACCTGCAAGTGAGCTAGACTTCCCATGCTCCCTGCCTTTCTACTTAAAGCATCTGCCACAACATTAGCCTTTCCCGGATGATACAAGATAGTGATATCATAGTCCTTCAGTAGCTCCATCGATCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGACATACTGTAAACTACGATGATCCATATAGACTTCACACTTAACCCCATAGAGATAATGTCTCTATTACTTTAATGCAATCACTACTGCCGCTAACTCCAAATCATGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335936" ref_strand="+" ref_description="SGN-U335936        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-62, score=215)">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="11041" stop="9782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10741" g_stop="10082" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335936" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10741" e_stop="10082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTTTTGATTTACATTGTGATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTGGCTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCCTAGAAATGGTTGACTTCGATGTATTTCTGGGTATGACTTGGCTTTCTCTAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGTCCAAGCCTGGGACAGATCCGTTAGTATGGGAGGGTGATTACACTTCCACTCCAATTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCGGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTACTCTCCCCATTT-CATATCCCCTTATAGAATGACTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTTAAGAGTTGTTAGGCAAAGGCTTCATTAGACCAAGTGCTTCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="10141" stop="11071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10441" g_stop="10771" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10441" e_stop="10771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGACAACGTTACAGTTTTAGCATTACAATCTAAGATTGCAAAATTTAGAGAAAGCCAAGTCATACCCAGAAATACATCGAAGTCAACCATTTCTAGGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGCCACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATCACAATGTAAATCAAAACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGAGCCAGGATCAAATAATACAGAAGTCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346572" ref_strand="+" ref_description="SGN-U346572        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 2e-31, score=89.7)">
      <seq>agatgatcaaccaggttctttctcatcttagcgggttatctgatcagggccagacacctccagtgtttcctgtaccagcacctcaggttccgggagtacaacatgcagctgttgtggctctccgcatggatgcctcattggaaataggcacatttcctcgattgactacagggcctataatgacgagtgatcaacatgaacttttcactaaattcttgaagttgaaacctctagtcttcaagggtgctgaatctgaggatgcctatgattttcttgttgattgtcatgagctgctacataagatggacatagtagaacggttcggggttgagtttgtgacctatcaatttcagggaaatgtcaaaatgtggtggcggtcgtatgttgagtgtcaaccagcacagcaccacctatgacttgggcatcattctctagcttatttatggaaaagtgtataccccggacgttgagggataggaggagagatgagttcctgagtctatagcaaggcaggatgtctgttactgcttatgaggctaaattttgtgcactatccaggtatgccacccagctttgcttcagtccacaagagcggattcaccgttttgtgaaaggattgaggtcagatttgcagatcccagccctacaggtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="12302" stop="11052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12002" g_stop="11351" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U346572" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12002" e_stop="11351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATTAACCAGGTTCTTGCTTATCTTAGCGGGTAATCCGATCAAGGCCAAACGCCTCCAGTGTTTTCTGCACTAGCACCGTAGGTTCCGGGAGTACAACATGCAGCTGCTATGGCTCCCCGCATGGATGCCTCATTAGAAATAAGAACGTTTCCTCGATTGACTACAGGGCCTATAATGACGAGTAATCAACACGAACTTTTCATGAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATAATTTTCTGGTTGATTGTCATGAGCTGCTACATAAGATGGGCATAGTGGAAC----AGGTGTTGAGTTTGTAACCTATCAGTTTCAGGGAAATGCCAAAATGTGGTGGCGATCGTATGTTGAGTGTCAACCAGCACATGCACCACCTATGACTTGGGCATCATTCTCTAGCTTGTTTATGGAGAAGTATATACCCCGGACCTTGAGGGATAGGAGGAGGGATGAATTCCTGAGCCTAGAGCAAGGCAGGATGTCTGTTACTGATTATGAGGATAAGTTTCGTGCATTATCCAGGCATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCGTTTTGTGAAGGGATTGAGGTCAGATTTGCAGATTCCAGCCTTACAGGTAGCA</genome_strand>
        <mrna_strand>AGATGATCAACCAGGTTCTTTCTCATCTTAGCGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTCCTGTACCAGCACCTCAGGTTCCGGGAGTACAACATGCAGCTGTTGTGGCTCTCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAACATGAACTTTTCACTAAATTCTTGAAGTTGAAACCTCTAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTTGTTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAACGGTTCGGGGTTGAGTTTGTGACCTATCAATTTCAGGGAAATGTCAAAATGTGGTGGCGGTCGTATGTTGAGTGTCAACCAGCACA-GCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGGAAAAGTGTATACCCCGGACGTTGAGGGATAGGAGGAGAGATGAGTTCCTGAGTCTATAGCAAGGCAGGATGTCTGTTACTGCTTATGAGGCTAAATTTTGTGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCACCGTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCCTACAGGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315285" ref_strand="-" ref_description="SGN-U315285        Tomato 200607 #1 [6 ESTs aligned]">
      <seq>ccacagccccagtggctggctcagtcgcaccctgtcccgccggtgctggtgttgatgctggcgtagtcgttgctctagttctaaccatctgcgaaatagagtgaagatggtcagataccaatttgtatcacctagataccaattggacccaagtaatagcacgaaagaagaaagaatggaattttccaaaagtcttatagcctctcaaggaaaagtaaaggcatccccctaccgttccttaagactctactagactcgttcttgtgtgatgagaccaacgaacctaatgctctgataccaagtttgtcacgaccaaaaccgggttgcgactggcacccacacttaccctcctatgtgagcgaaccaaccaatctaaccttaacatttcaatataatatcaacagaaagtaatgtggaagacttaaactcattaaatacagaccaattcattaacttctaaaattcaacatctattattccccaaaatctggaagtcatcatcacaagaacatctacgatcaaatgactaaactatgagtattctaaaagctaaaaatacataagaagctagtccatgccggaagttcaaggcatcgagacttgaagaagaagatccagtccaagctagaagcattagctcaccctgaatttccgatgtagtaagactggcttgaattactgttgagttgaggacgatggcacgtttgctgcactccacaaataaacaagaagagaacataaaagtaggggtcagtacaaaacacgggtactgagtagatatcatcggccaactcaaaatagaaatcaatatatataccaagtaatatcataaaatcaactatgatactcaacatgtagcaacaacaaatactatatcattaacaattaccgtcaagttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagattgagtatattaacatctttcaagattcattatctttatttctcttgtgtcggtacgtgacactccgctccctcaatattcattaatcctcttgtgtcggtacgtgacactccgatcccctaaatctatatgtcggaacgtgacactccgatcccctaaatctacgtgtcggttcgtgacacctgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaatctatgtgttggttcgtgacacctgatcccttaatctacgtgtcggtttgtgacacccgatcccctaattctacgtgtcagttcgtgacacccgatcccctaatctcattctatcaattcatcaagccttctcccttaccaaggcatcatcaatctcattactttagttcatcaagccttctcccttaccaaggcatcatcattaaaaagagattaggtttttacaagatttgggattcaataacttcatcatgcttatataataacaattatatagttacattcatgcaagcatacaattaagcacatagcagggtttacaatattatcaatacatatcattctctattaagagtttactacgaatatcgtaagagaaacaataacctacctccaccgaagacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="11934" stop="23559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12240" g_stop="12651" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="460" r_length="411" r_score="0.876"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12652" i_stop="15144" i_length="2493">
            <donor d_prob="0.000" d_score="0.80"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15145" g_stop="15935" g_length="791"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="1253" r_length="793" r_score="0.934"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15936" i_stop="22851" i_length="6916">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22852" g_stop="23259" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1254" r_stop="1660" r_length="407" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U315285" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>1611</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315285" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12240" e_stop="12651"/>
          <exon e_start="15145" e_stop="15935"/>
          <exon e_start="22852" e_stop="23259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGGTGTTGGCGCAGTTGTTGTTCTAGTTCTAACCATCTACGAAATAGAGTGAAGATGGTCAGATATCAATTTGTATCACCTATATACCAATTGGATCCAAGTAATAGCACGAAAGAAAGAAAGAATGGAATTTTCCTAAAGTCCTGTAGACTCTCAAAGAAAAGTAAAGGTGTCCCCCTACCGTTCCTCAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAAGGCTATGATACCAAGTTTGTCACGACCCAAAACGAGCCGCGAGTGGCACCCATACTTATCCTACTATGTGAGCGAACCAACCAATCTAAACCCCAACATTTCAACCATAAGAT--ACAGAATATAATGCGGAAGACTTAAAACTCATT-AATAAACATCGATTAAATAACTTCTAAAACTCAATACTTATTATTCCCAAAATCTGAAAGTCATCACCACAAGAGCATTCTATCCTCAAATTACTAAATCTAAGAGTATCTAGGAAGCTAAAATAAGTAAACAGATGGTCCATGTCCGAACTTCAAGGACATCAAGACATGAATGAGAGAGAATCCAGTCCGAGCTAGGAACAATAGCTCACCCTGAAATCTGACGTGATGAAGACTGGCTAGAGTTGAGGACGAGTTGAAGTCGATGACACGTTTGCTGCACTCCACAAATAACAAAGAAGAAAATTACACGTAGGGGTCAGTACAAGGCACAAGTACTGAGTAGGTATCATCAGCCAACTCAAAATAGAAAGCAATATATATCACATAATAACATAAAATCGACTACCATACTCAACTGGTGACAACAACACGTACCATAACCATTGGCCACAACCCCAGGCACATCTATGAGGACTCAAGCCTCCACACCATACTCATTTGGGGAATAGGTTCTTTAAATTTGAGTATATTAACATAATTCAAGATTCATTCTCTTTATTATCCTGGTGTCAGAACGTGACACTCTGATCCCCTACTACTACGTGTCGATTCGTGACACCCGATCCCCTAATTCCTGGTGTAGGTACGTGACACTCTGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATTCCCTAATTCTTGGTGTCGGTACGTGACACTCCGATCCCCTAATTCTACGTGTCGGTTCGTGACATCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCATGGTGTCGGTACGTGACACCCGATCCCCTAATTCTACGTGTCAGTTCGTGACACCCGATCCCTTAATCTCATTATTTTAGTTCATCAAGCCTTCTTTTATACCAAGGCATCATCATTAACAGTATATTTAAGGTTTTTAAGATTCCACAGTATCATCATTATAATCCACCACCATATACATAATCACAACATGCAACAACACAATGAAGCATATAGAAGACTTTACAATACCACCCAACACATATCAATCGCTATTTAGAGTTTACTATGAAATAGCATAAACCATAACCTACCTCCATCGAAGATTCGTGATCAAGCAATCTACTTCTCCAATGCTTTTTGCTTTCTCTTCGTTCTTCTTTCTCTCTCGCTCGTTATCTCTTCTTTCAAATTCCCTTTGTTTTACCCTAATTACCATATAATTAAGTATAAAAGATGATAAAAGTAACCCACTATTTATTTTAAGGTTATCTCCTTTAATCCTCAAGTAAATAAGTTATTAAACTTACCCACTAATTTCATACAGTTTGACATAAATAGTCCAAAACACCCCTTTAAAACTTTAGCAGAAATCCGACCTAGTCAAGGTTACGCAGCTCGTGACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCTATTTCCATCACAAAGTTCAGAGAGTCGAATTCATTAAAGAGTCTGTGAAGGTCCGTCGTGCCTACGACGGTCCGTGCTGCTCTTCCGTCACGAAGTTCAGAGAGTTGTTTCCCCGTACCCAAATTTTAGAGTTTAAGTGTTTTGGGACGGAGACCCTCGACGATCCGTCGTGACCACGACGGTCCATCGTGTGGTCCGTCGACACAATCAGTTATTTTCAGAACTAAACTTTACTGCTCGAAACGACTAAACAGTCGTTACAAAATTTCTCAAGGAAAAAATTAATACAGATAATCATTTTAAATATACTTATTACTAACCATTCATCCTCCATTATAATGATTCTAAAAATTTACTTAACTTTTTCTCCAACACTTTAATTATAAGAAAATATCATGTATCGTTAATAATCATAAATATTCATATTATTTGTGAAAAGTTTTTTTATGTTTACTTTATTTAGAAAAAATTCAAGAGTCCACTTATAAGTTTTTAGTAGATATATAAGTTTTTTTTTAATCTTAACATAAAACCTTTTATCATTCATCTATAATTGTTCATTTATTACTTATTTTATTATGCATTTTAACAATAATATATTATTTTTATGTTAATTCTATATCACTAAAAATTATTTTATCGAACTAAAATCATGTATCACCCATGTCCTTCCAAAGAATCTATATATATAGAGAACTTTATATTTTAATATATAAATATTGAAGTACTTTTTTAAGTTTTCAAATTATAGGTAGCTTATCTATTACGAATAATTTTTCATATTTCTAAGTCTGTTTTTGAATTTGTTACTATTTTAAATCTTTTGATATTTTTAAAAAAATTTAAAAGACTAAAAATCTCACTTTAAATTTTTAACAAAACATCAAAGTTAACCATATTTAATTTTGAGGACACATTCAAATGGATAATTGTCACGACCCAAATCGGGTCGCGACTGACACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATTTCAACATAAAGTAATGCGGAAGACTTGAACTCATTAATAAAAACCAATTCAATAACTATTATTTCCCAAAATCTGGAAGTCATCATCACAAGAACATCTAC-TTCAAATTACTAAATCTAAGAGT-TTCTAAGAAGCTAAAAATACATAA-AAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTG-ATATCCGGAGTAATGAAGACTGGCTAGAATTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACCAAACACGGGTACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACAATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTACATTGAGTATATTACCATCTTTAAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCACTCCCTC-ATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTACTACTATGTGTCGGAACGTGACACTCCTATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAATCTCCTTCTATCAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATTATTAACAAAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCACAATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAGCAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGACTAGTGATCAAGCAAGCGAATTCCCAAAGCTTTGTTCTTCTTCTCTCCTTGTTCGTTCGTTTTCTCCCTCTCTTGTGCTTTCAAATTTTCTTATTCCAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATAACCCCCTAATTAACTTAAGGTTACCTCTTTTAACCTCCAAGTAATTGGACTTATTAACCTTAACCCTCTAACTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCTGACCCAGACTGGGATTACGCAACCTGTGACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTGGATTTCCCCTGAAGACTCTGTGACGGTCCGTTCTTCCATTTCTTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCTGTCGTGCCCATGACGGTCCGTCGTGGGGGTCCGTCGCCTCAGCTTGTTTTTCCAGAAATAAAATCTGCTGTTCAAAACGACTAAACAGGTCGTTACAATAGATACCAATTTACCCATCGTTCGTTCCCGAACGATCACAAGAAGGAAAACAAGGGCAAAAAGGAGTACCTGAATCTGTAAACAGATATAGGTATCTTTCTCATATATCTGCCTCCTTCTCCCAAGTGGCTTCTTCAACGGGTCGATTCTTCCATTGAACTTTGATGAATGCGATCTCCCTTGATCTCAACTTGCGAATTTCTCTATCTAGAATGGCAACAGGTTCCTCCTCATAAGACAAGTTCTCGTCAAACAAAACTGAATCCCAACAGATAATGTAGTTTCCATCCCCATGGTGTCTTTTCAACATCGACATATGAAATACCGGATGCACTCCGGATAGCCCTGGAGGCAAGGCTAACTCATAAGCCACCTCCCCTACTCGCTTAAGTACTTCAAATGGATCAATATACTTTGGGCTAAGTTTACCTCGCTTACCAAACCACATCACCCCTTTCATTGGCGAAACCTTCAACAAGACTTGTTCACCCTCCATAAACTCCAAGTCTAGAACCTTCCTATTTGCATACTCCTTCTGTCTACTTTGCGCCGCTAGAAGATTTTCTTGAATAGATTTCACTTTATCTAACGATTCCCTCAGAAGGTCAGTACCCCAAGGTCTAACTTCAAATGCATCAAACCACTCAATGGGAGACCTACATCTTCTCCCGTATAGTGCCTCAAATGGGGCCATATCAATGCTTGAGTGATAGCTATTGTTGTAGGAGAACTCTGCTAAGGGTAAAAAGCTATCCCACTGACCACCAAATTCTATCACACATGCACGAAGCATATCTTCCAACACTTGAATCGTTCGCTCAGACTGACCATCGGTCTGAGGATGGAACGCAATACTAAGGTCCAACCTAGTACCCAATTCCGCATGCAATGTTTTTTAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATAATGGAGAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATTACCCAAATAGAATCAAACTTTCCCAATGTCTTTGGAAGACCAACCACGAAATCCATTGCAATCCTTTCCCACTTCCATTCAGGAATGGGCATTCTCTAAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATATCACGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACAGTACATCTTGGTTGCACCCGGATGTATCGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCGACGCGGGGTACACATACCCTTCCCTTAATCCTCAAAACACCTTCCTCATCGATTGTCGCTTCTTTAGGCTCTCCTTGCAACACTTTATCTCGGATCCGGATTAATTTTTCATCATTAAAGTGCTTTCCCTTAATCTTGTCAAGGAAGGAAGATCTTGCCTCCACACAAGCTGAAAATCCTCCCTTCTCATTTACTTCTAATCTCATAAGGTCGTTAGCCAGAATCTGAACTTCTCTAGCCAATGGGCGTCTAGAAGCTTGCAAGTGAGCTAGACTTCCCATGTTTCCCGCCTTTCTACTTAAAGCATCCGCTACAACATTCGCCTTCCCCGGATGATACAGAATAGTGATGTCGTAGTCCTTCAGTAGTTCCATCCATCTCCTCTGTCTCAAGTTCAAATCTTTCTGAGTAAAGACATACTGTAGGCTACGATGATCCGTATAGACCTCACACTGAACCCCATATAAATAGTGTCTCCATTGCTTTAATGCAAACACTACCGCGGCCAATTCCAAGTCATGAGTTGGATAGTTACGTTCATGTACTTTTAATTGTCTTGAAGCATAAGCAATCACATTCTTCTCTTGCATTAGCACTGCACCCAAACCCGAATAGGATGCATCACAATAGACAATGAAATTCTTACCTTCCACTGGCAAGGTGAGAATTGGTGCAGTAGTCAACAAAGTCTTGAGCTTCTGAAAGCTTTCTTCACACTCGTCCGACCATACAAATGGAACATTCTGCTTAGTCAAGTTCGTCAATTGGAAAGCAATGGAAGAGAATCCCTTGACAAATCGGCGGTAATAGCTAGCTAAACCAACAAAACTCCTTATTTTTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACAATCACCCCATCCTTAGAAACCACATGCCCCAAGAAGGACAGTGCATCTAGACAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATGAATACAATCACAAAGATATCCTAATATGGCTTAAAAATCTCGTTCATCAAACTCATGAATGCAGTAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGTCCATACCTGGTTCTAAAAATAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGATAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTAATAGTTACTTTGTTCAACTGCCGGTAGTCTATACACATCCGAAAACTCCCATCCTTCTTCTTTACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGTGGGAGCCATTCTATAAGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCAGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACTAGACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAATAGAAACACGAATAGGCGTATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAAGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTGTTTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCCCGGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCTTCCAGAATAATGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTCTATTTGGGACAATTCCTCCTAATATGCCCAGTCTCCCCACATCCATAACACTCTATAGAGTCAAGTATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTATAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAATCCTCTTTGATGTCGATGCCATTGTGAAATCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACTTGTAAGGCTGAAATCCGCAATTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTATCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTAAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGAAAACGTGCCCATGTCCAATGAGGCATCCATACGAGGAGACATAGTGGCTGCATGTTGTACCTCTAAAATCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTCAGTTTCCCCTTCCTCACCCTCTCTTACTACTTCTTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAAGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCGGTGGAGGAGTCACTGCCCCAGTGGTTGGCTCAGACGCACCCTGTTTCGCCGGTGCTGGTGTTGGCGCGGTTGTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCAGATACCAATTTGTATCACCTAGATACCAATTGGACCCAAGTAATAGCACGAAAGAAAGAAAGAAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCCAAATCGGGTCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATAAATAAAATCAATAACTATTATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTACTTCAAGTTACTAAATCTAAGAGTTTCTAAGAAGCTAAAAATACATAAAAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTTATATCCGGAGTAATGAAGACTGGCTAGAATTACTGTTGAGTCGAAGATGACGACACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACCAAACACGGGTACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGATGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACAACTATGTGTCGGAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTTTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCATGACACTCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAATCTTCTTCTATCAACTCATCAAGCCTTCTTTCTTACCAAGACATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATCATTAACAAAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCAC-ATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAACAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGACTA</genome_strand>
        <mrna_strand>TGTTGATGCTGGCGTAGTCGTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCAGATACCAATTTGTATCACCTAGATACCAATTGGACCCAAGTAATAGCACGAAAG-AAGAAAGAATGGAATTTTCCAAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCAAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCT-AACCTTAACATTTCAA-TATAATATCAACAGAAAGTAATGTGGAAGACTT-AAACTCATTAAATACAGACCAATTCATTAACTTCTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCAACATCTATTATTCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAA-CTATGAGTATTCTAA-AAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCGAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGT-AAGACTGGCTTGAATTACTGTTGAGTTGAGGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAGAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAATACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCAATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTATATGTCGGAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCTGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATGTGTTGGTTCGTGACACCTGAT-CCCTTAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAATTCTACGTGTCAGTTCGTGACACCCGATCCCCTAATCTCATTCTATCAATTCATCAAGCCTTCTCCCTTACCAAGGCATCATCAATCTCATTACTTTAGTTCATCAAGCCTTCTCCCTTACCAAGGCATCATCATTAA-AAAGAGATTAGGTTTTTACAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATAACAATTATATAGTTACATTCATGCAAGCATACAATTAAGCACATAGCAGGGTTTACAATATTATCAATACATATCATTCTCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACAATAACCTACCTCCACCGAAGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="18665" stop="19977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18965" g_stop="19677" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18965" e_stop="19677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAATAGCTAGCTAAACCAACAAAACTCCTTATTTTTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACAATCACCCCATCCTTAGAAACCACATGCCCCAAGAAGGACAGTGCATCTAGACAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATGAATACAATCACAAAGATATCCTAATATGGCTTAAAAATCTCGTTCATCAAACTCATGAATGCAGTAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGTCCATACCTGGTTCTAAAAATAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGATAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTAATAGTTACTTTGTTCAACTGCCGGTAGTCTATACACATCCGAAAACTCCCATCCTTCTTCTTTACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGTGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="19185" stop="20442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19485" g_stop="20142" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19485" e_stop="20142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGGTACTTGTTCTTAATAGTTACTTTGTTCAACTGCCGGTAGTCTATACACATCCGAAAACTCCCATCCTTCTTCTTTACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGTGGGAGCCATTCTATAA-GGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCAGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACTAGACAAGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="21280" stop="9722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20980" g_stop="20808" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20807" i_stop="20064" i_length="744">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20063" g_stop="19537" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="20980" e_stop="20808"/>
          <exon e_start="20063" e_stop="19537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCAGCCTTACAAGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGATTTCACAATGGCATCGACATCAAAGAGGATTTGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTATAGACTGTAGTTGGGGGTCCACCTCAGACCGGTCAACACTTCTCTGAGAGACCTATACTTGACTCTATAGAGTGTTATGGATGTGGGGAGACTGGGCATATTAGGAGGAATTGTCCCAAATAGAGTTATAGACCCCCAATAGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCATTATTCTGGAAGACGTGGTGGTCGAGGTAATGGTGGTCACCAAAACGGCCGGGGTGATGGGCAAACTGGAGCCACTACATCACAACATGGTAGGGGCAATGGACAAACAAACGAAAGGGCCCATTGTTATGCTTTCCCTGGGAGATCGGAGGCGGAGACATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCTTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATACGCCTATTCGTGTTTCTATTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTCTAGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCTGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATA-CCCCTTATAGAATGGCTCCCACGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTCGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGTATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTT-GT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="19254" stop="20610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19554" g_stop="20310" g_length="757"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19554" e_stop="20310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGTGGGAGCCATTCTATAA-GGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCAGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACTAGACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAATAGAAACACGAATAGGCGTATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAAGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATCAACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="19867" stop="21903"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20167" g_stop="21603" g_length="1437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20167" e_stop="21603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCGTATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAAGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTGTTTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCCCGGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCTTCCAGAATAATGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTCTATTTGGGACAATTCCTCCTAATATGCCCAGTCTCCCCACATCCATAACACTCTATAGAGTCAAGTATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTATAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAATCCTCTTTGATGTCGATGCCATTGTGAAATCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACTTGTAAGGCTGAAATCCGCAATTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTATCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTAAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGAAAACGTGCCCATGTCCAATGAGGCATCCATACGAGGAGACATAGTGGCTGCATGTTGTACCTCTAAAATCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTCAGTTTCCCCTTCCTCACCCTCTCT-TACTACTTCTTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCC-CTCCCTTTCTCTATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="21907" stop="20754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21607" g_stop="21054" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21607" e_stop="21054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAAGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAACTGAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGATTTTAGAGGTACAACATGCAGCCACTATGTCTCCTCGTATGGATGCCTCATTGGACATGGGCACGTTTTCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGATACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAATGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335932" ref_strand="+" ref_description="SGN-U335932        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|2190718|gb|AAB64397.1| beta-galactosidase [unidentified cloning vector](evalue: 3e-14, score=80.1)">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="20942" stop="21947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21242" g_stop="21648" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="407" r_length="407" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335932" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21242" e_stop="21648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTAAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGAAAACGTGCCCATGTCCAATGAGGCATCCATACGAGGAGACATAGTGGCTGCATGTTGTACCTCTAAAATCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTCAGTTTCCCCTTCCTCACCCTCTCTTACTACTTCTTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAAGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCG</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315286" ref_strand="-" ref_description="SGN-U315286        Tomato 200607 #1 [5 ESTs aligned]">
      <seq>gtcgttgctctagttctacccatctggcaagagagtgagnatggtcagataccaattcgtatcgcttagataccaattgactcgaagtagtagcacgaaagaaagaatgaaagagtgaagttttcctaaagtcttatagcctctcaaggaaaagtaaaagcgtccccctaccgttccttaagactctactagacttgttcttgtgtgatgagaccaacgaacctaatgctctgataccaagttttgtcacgacccaaatccgggccgccactggcacccacacttaccctcctatgtgagcgaaccaaccaatctaaaccttaacatttcaatgtaatagcaacagaaagtaatgcggaagacttaaactcattaataaaatcaataactactattattaaacatctattattcccaaaacctggaagtcatcatcacaagaacatctactttaaactactaattctaagagtttctaagaagctaaaaaattacataagaagctagtccatgccggaagttcaaggcatcaagacatgaaggagaagatccagtccaagctagaagcgttagctcaccctgaagatccggtgtgacgaagactggcttgagttactgttgagtcgaagatgacggcacgtttgctgcactccacaaataacaagaagaaaaacataaaagtaggggtcagtacaaaacacggctactgagtagatatcatcggccaactcaaaatagggaacagtatgtattaagcaatatcataaaatcaactaatatccttaacatgcagcatttatagttaccataacccttggttacaacaccaagcacatcaatgaggactcacacctcctcatcatactcatttgggaatttagttcatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="21417" stop="46147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21717" g_stop="22110" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22111" i_stop="41558" i_length="19448">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41559" g_stop="41916" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="755" r_length="359" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41917" i_stop="45714" i_length="3798">
            <donor d_prob="0.923" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45715" g_stop="45847" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="888" r_length="133" r_score="0.880"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U315286" ref_strand="-">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>885</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315286" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="21717" e_stop="22110"/>
          <exon e_start="41559" e_stop="41916"/>
          <exon e_start="45715" e_stop="45847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCAGATACCAATTTGTATCACCTAGATACCAATTGGACCCAAGTAATAGCACGAAAGAAAGAAAG-AAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAG-TTTGTCACGACCCAAAT-CGGGTCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATAAATAAAATCAATAACTATTATTATCCCCAAAATCTGGAAGTCATCATCACAAGAACATCTACTTCAAGTTACTAAATCTAAGAGTTTCTAAGAAGCTAAAAATACATAAAAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTTATATCCGGAGTAATGAAGACTGGCTAGAATTACTGTTGAGTCGAAGATGACGACACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACCAAACACGGGTACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGATGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACAACTATGTGTCGGAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTTTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCATGACACTCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAATCTTCTTCTATCAACTCATCAAGCCTTCTTTCTTACCAAGACATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATCATTAACAAAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCACATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAACAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGACTAGTGATCAAGCAAGCAAATTCCCAAAGCTTTGTTCTTCTTCTCTCCTTGTTCGTTCGTTTTCTCCCTCTCTTGTGCTTTCAAATTTTCTTATTCCAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATAACCCCCTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGTAATTGGACTTATTAACCTTAACCCTCTAACTTATTAATTAAAGTAGGAATAGTCCAAAACTTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACTGGATTTCCCCTGAAGACTCTGTGATGGTCCGTCACACATGTGACGGTCCGTCACACATGTGACGGTCCGTCCTTCCATTTCGTTACAAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGAAGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGGGTCCGTCGCCTCAACCTGTTTTTCTAGAAATAAAATCTGCTGTTCAAAACGACTAAACAGGTCGTTACAATAATGAAGTCATAAATTCTTAATTATATATTATAACTAACATAAAAGAATAGGTACTATTCAACCAAAAAAAGTATAGGTATTTGACCGTACAAGTTTTTATTTTTTGATAAAATTAATTCATGAATTGAGTTGAAATTATAAAGCTAAATAATAAAATTTATTAACTAATCTATTGATTTAAAAATTAAAGAAAAATAAAAACTTTGTAATACCGCGCATAGCGCGGCTAAGTTTACTAGTTTAATTATATATGAAAAGATAAAATATGTATATACTTACCATGTATCAAGTTTAAATGGAAATTGTCCATCGAATTTCGAAAGAGTCTCAATGATGAAGCGTGATGAGACTATATAAGTTAAGAGTAGCATCAGTACAAATATAATAAAAGCTCGCACCATTGGAGTTGAGTAAGGCTGGGTAACGAAACGGGATGTATTGGTACCGGTCCGGTACCGTTTCAGTTCGTTGCGGTTTGTCCCGGTTCGGTTGTCTATGAGACGGAAATGGACATTTCGAACCGGGACACAGAACGATACAAAACCGAGGTTTGGTACCGGTTTATTTCGGTTTCGGTCTTGTTCCAATTAATTAATATTTATTAATTAATTTATATTATATATTTATTAATTAATTTATATTATATATTTATAAATTATAATTTCTATTTTATATTAAATAATAAATACTACACAAGTAACCCAACTACCCCTATTAGTAAACATAGTATTACATTCGAGAATTAGTTGAAACAGAACCCTTCCTAGTATGTGGTTGCGTAAACTATGCACTCTACTAGTAGTTATAAATTGAAATTGTAATTTATAATACAAATTTAAATAAATTAAATTGATATTTTTTAATTTGTTTAATTGTTTTATCCTTATTTTTATTTTTATTTTTAAAATTACAAATTTATTTTATTTTAATTACAAGTTATAAATATTACTTTTAAATTATAACATATTAATAAATAATAAGTAATAACTTATAAACTTCAAAGATTTAAATCTTGAAAACTTAATTAGACTTAACTTGCAAACTTAATAAGTAAAATTTTTATTAAAAATATCTTTAAAATAACTTAACTAAAAAATTACGTTATAAATTTAAGAACTATTAATTTAAACTTAAAAAAATAAAAAAAATATTCATATTTTCGTAATTCAAAATTTTTTTGATAAAACTATATGTGTCATCCCGTTTATTTCATTTCGATCTGTTTCGATTCCATCTCGGTATAATGGGATGGGACGAAACTAAAATTCTTCTCAATAATTTTGTTCGATTTATCCCAATATCAATTAATAAATCGATCAACTTATTCCGTTTTAATCTGATATCCATTCATTTCTATTTGCTGGAATAATCTAGGATGAATCTTCCCGATGATTAGAAATAGGAAGAGTAAATAAGAGTTGAGTGGAATACACAAAATAATGAGGTGAAGAAGTGTTCTGAAAGTTCTTAGACGTGGCACACTTGTATATAGACCGCAGACAAAGAAGTGAACAATTATTTCGAGGCCTAACATGTCAAGTTTGTACAAGTTAAATGTCTACTTGTGCATATCCAAAATTGAAGAGTATAAATATAAAATAAGACAAAATTAAAAGATAAATTTATGTATTATGCCGACATTATTTTGGAGCCTAACATTTTAGTTTTGGCCCACGTATGGCTAGTAAGGAAAGTTATTTTAATAATGTGAAATTTTCATAAATAGCTGAGAGTTAGAAACATAATGAAGCTTCTTAGTTAAAGTTTGGTTAATTGCATAATGTAGTTACAATTTGAGTAGCTATTAAGAATTATCTTTGTATACTTTGCGTCATTTTTATACAAATAGGACTTCCTATTTAATAATGGGCAAATTACATAAGTCACATATTTTTAAGATAAAATTACAATATATTCTTTAAAATTTTATAATAAAAAAAATTCCTCAAAACGGCTACAATAAAATAAGCGCTGATAAATTAATCTAATGCACGGGATACGTTAATGATCCGGTGAAAAATATATATTTTGAAATTAAAAATATTTTTAAAATTAATTTTTTTGCCAAAAAAAATGTAATTTGAAGTTGTAGAAGAGTTTTGGAAAATATTTTCCTTAATTTTTGAAGGGAATTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAAACATTTTTCAAGAATTTTGTCCCAACCAAACATGAGAAAATTGAAAAACATTTTCTAGAAAATATTTTCCTTCATACCAAACACACTTTTAAACTTGTATAAACTTGAACAAATAAACACACATGTCCTACATGTCATTTTTTGTCCTACATGTATTTTGCCATGTAGGACTCATGTGTTTATTTATTTAAAAATTGGATAGTGAAAGTGTCTATTTGTGCATTATGAAAGTTGGAGGTCAAAGTTAAAATTTAAAGTCAAGTTTGAGGTCCAATATATGTATTGTAACTAAAGATAAATAAAGCACAATATGCATTATATTATTAACAGAACATGTATAAGTGCATTTATCATAGCACCTTAGCATAATTGTACACATACAAGATAATCAACCATAATTACCTAGTCTTATTCGAGCTTAGATGTTTCATTTGTATGATCAATGGATAATTGATGATACTTGTCCTATCTCATCTGGATCGCGAGGAAATACTCTATTTATTTGAGTTGGCAAGCTTGAAATTGGGGGAAAATTGAGCTCTGATTCACCAAAATTAGTTGCTTTTTTTGTATTTGGTAAGCTTGTAATTATAATTGAATTTTGACGTTCACCATACTTTTGAATAGTTTCTTCATTTGTAGTTGAAGCGCTTGTAACTGCGTTATAACGTGCTCTTAGTGTGCGAGGAGTTATTGCATGTGTGTGAGCTGACGATCTTGAAATAGGATGGTATTGGATTGCTGATCCACGCGAAGTAATTGCTTTATTTGTATTTGATAAGCTTGTAATTCCATTATGGCGACTTGCCCATAATTTGCGAGGAGTTGCCTTTAATTTTACCTGTTGCCACATTTGTGATGGGGAAAAACGATGGAAAATATGAGCAATAATCGTTTGAGAAGGTGAGCTTGAAATGGGGTAAGAACGAATTTTTGATTCACCAGAATCAACTGCTTCATTTGTATTTGATAAGCTTGTGATTATAATTGGATTATCGCGTTTCCCAAGCTTGGGAAAAGTTGCTTCATTTGGATTCATAAGTGGGCCTCGAGGAATTATTATATTTGTATGAGCTAATGAGCTTGGAATGTGAGAATCCTGGTGTTCTGATCCACTAGAAGTTGCTTCCCCTGTAACTGCATTATGGCGTGCCCCTAGTATGTGAGGAGTTGCTACATTTGCATGATCATTTGGCGAGCTTGAAATAGCAAAATATTGATGTCCTGGTTCATCAGAAGTTGTTTCTTCTGTATATGGCAAGCTTGTAACTGTGTTTTGTTGTGATCCTAATATACGAGGAGTTTTTGCATTTTCGTGAATCAATAGGTTTGAAACTGGAAAATATTGGCCTCCTGATCCACGATAAGTTATTTTATATGTATTTGACAAGCTTGTAACTGCGTTTTGACGTGTCCCTAGTTTGCGAGGAGTTGTTGCATTTCCATGGTTCCAAAAGAGTGGAAATATCGTGAGAAATGCAACTGCATAAAGTAGGATTATTTTGGTCATGATGACTTTGATGTATATTTGAGAGATGACCAAATATTGATAAATAACATGCCTTAATAAAGGTGTTATATATATAAGGAACCAATCTTGGTAATAACTTCCATGTTTTATTTAATTCATAAAAAATTATCATCTATCACTTATGTAAATTAAATATTATACATAGTGTATATCTTTTCCTTGTTATTGTTTCGAATATATTTGATACATTTGTTAGTTTATCGTTTTCATGCAAACTTTCTTCCAAAATTTGATTCTCCAATTTTAATATTAAATATTTGATCATTTCAATAGTTTGTTAGAGTATATTGTACGCAGACCTTATCTTTTATCAAATGTGTCGACAAAAGTGTGTGTGTATATATATATATATATATATTTGAAATATCAAATTAGAGACCAATTGTATTGTTTTGACTAAACTGTGTAGAAAAAAATCATGTAATTGTCTATGATTCGGTTCCACTTAGAACGAGACGCTTTGATTTATGCTAAAGTGTTTTCAAGATTTACGCCTTTATAACCTTCTCTATCGCCTATCATCGATATTTAATTTATCGTATAAGCATCTCATCCCCATTTATATATTAAATGTATGTTTATATTTGACTATATGATTAACTAGCCTAATTATATCGATCAAGCAAGTGTTTGGAGCTCAAATTTCGAGTTATATATTTTTTCAATGAAATATGATCGAAGGTTAAAAAAAATAGAATGTGACAAATGAAGTTGTCAAAAAGGGTCAGCCACTCCAGTCCAAGCCTCGCGGTCAAGGAATTTGATGGGCTAGGTCGAGTCGGTCCTCCATTTGGCAGAACTTGAAAATGCTCAATCGATTCAATCCAACCCTATAAGGCTCGTGCAATTTATGGCGGGCTAGCCCGTCTTTTTATCATTTTTTTCTTTTCAAACTTAAACTTGTGTACATATTACAAATTAAATATAGGAAACAATTGTATTGTTTCAATAACACTAGCAAATGATCTAGTGTGCTTAGCATGTATTTAGGATACTAGATACATGAGATTCATGTATCTGGTGTGATGCATATCATACGCGAGTGAGATAAGAGAGTAGCGAGCGAAATGTTTGTGTGTGTGGGGGAGGGGGGGGGGGGGCAGGCAAGGGCGCATAATTTGTATGTGTATTCTAGATACATACGATTTCACTTGGATAGAGTGTATCTCGAACAAATTACACCTATTTTTGAGTCCATGTATCTGAATGCATCAAAATTTGATAAGATTTGTATTATTAATACAACATAGTGTGCATCTATGTAATTTGCTCATACACTAGTGAGATTTCTGTAAATTATCCTTAATTTGCTCATACACTAGTGAGATTTCTATAAGTTACCCTTAAATAAATATTTTCGCCCATAGGCCGATCCGAGCGCAGTTACGATCAAGCCTCAAGAGTCAAAGGCTTATATGAGTCACACTTATAAGCACTAATTTTAAATGAGCTTGAAAAATCATATCATAACTCTACCTCAATAACGGATTGTGTCGAACTGGGCCAACCCCATTTTAGTAGCTCTGGTGATAAATTTGATATTTTCTTTTGTAGTAAATTAGAAGTATCTATTTTAAAGGGACAAAAAGATCTTACAGAAATGGGTTTAAACTTTATACTCTCTTAATTAATTAATCATACAATTCAAACATTAGGAACTTGATAGTTTATAGAATATTAATTCATCTGTAAACCATCGAATTTATTGTTTTACACAAAAAATTAAAGGTAAATTAATTTTCACATTATCAGATCACGTAATTAATCTCTTTTCATAGAAAATTGATCTATAATCTTGAAAACAATACATATTATGGCGCCCAACGACCTCTTTCTTTTTCTTTCATATTTTTTTAAGTGAACCAAGAAAAAGGTGACAAAGGAAACTTTTTAACATTTAATTAGCATCTACCGATAGTGAAGATAAGTAAATGCTATCACGTTCCCAAAAGATATATTTACACAATCATCATACGTAAAAAATTAAATACATAATATATAATCTTGAAAATAATGCACGTTACGTCAATCCAATATATATAAGAGTGACCTCTTCTTTTGGCCAAAAGGAAACTTTTATTCGTACTAGGTAAAGTTATTACATAATTTGATCCGAAAATAAAGCAAAAACAAGGGGTACATGATATTGCATTAAGGTATTTTCGAGTTTAACTAATATCCATCGATAGTGTAAATAATTTTTCACGCAATCAGTTCACTCGAAAGACATCTCCACACTAAACCACCGTATATGAATAAAGTGGTCGGATTTATAATCTTGAAAACAGTACAAATTATGTTACAATAACTTGCTAAAACAAATACAAGTGACTTGGTAACATGAAAATTATTTATACTATCAACATATATAAGCAGAACTCCGAGTTTATTAAATAGCCACTTTTAAGAAGTAGGACATGGGCATATGTAACAACAAGGTGTACATGAGCAAACTTCCATTTTTCTACGTTGAAGCTCAGCAAAAAAGCCCTTTGATATTGGAGTGAAGTAATTGTCTATAGTTTCAAATTTATCACTTATATAATTATCATCATTATTATTAGAAGAAGAAGAAGAGTTTCCAATGAAGAAAAGTAGGGGGAAAATCAAGAAAATTGCAAAAATGGACACTAAATTTTTGTTTGCCATGGTTCAAGAGTTTAAATAGCTATATAGATGAATCATCTTATCCTATGTTCAAGTGTTTATATAGTAGTATATTTCATGGAGTATAATTTAGGGGTCGTTTGGTTCAAAATTACGATATCTCAACATAAATAATCTCACTTTTATATACATATATAATCATGACGTCTGAATCAGTTTACTCATAACTAATTTCGTGGATATATATATATATGTATGCTACCTCTTACCAAGTTACCAGAACAAGTATCACATAATTTTATCCATCAAAATTTAAACAGATAAAAGAAAAACTCTAGTGTTTTTCCCTTCCTATTGGAAAAAAAAATACGGTAGATAATCCTTCGATTTTATATGAATTTTAATCTAGTTTAAGCTAATATATATTGGCTCATAACTAAATGGTGAACAAATTTAATCCCAAATTCTAATATTGAAATAACCGTTAATAATCCTTGTAACCAAACGACCCCTTATGGTATAAAGGTCAAAATTTTGTCATTTACAAGAGACATGTCTTTGAAATTAGAAGTATAGTATAACAATAAAAATAAATTTAAATTTACAAAGTGATTTTGTCTTATAATATTTTTAAAGAATCTTTCAGACTGCAGAATAAGAACAAATAATTTAATTTTATTAGTAATTTTAATCGGATAGCAAATTATAATCTGTATATATGGAGAATAGAGGTCATAATTAACTATTAATCTATGTAAATTTCACTTGATAGCTTTAAAAATATTATTATCATTCAGCGTATATTTTATCATTTTTTTAACAATTATTTAAACTCTAAAGCTTTAACTAAAACATAACCATCAGAAAGAGTTTTGTTCTGTCCAAACTAATACAATATACGGGAGTCTCGAAGTAATGATAAAATTATCTTTGTGTGATTTATAGGTTATGTGTTTGAATCTTACAATTACTAATATTCGTATTCTGATATATTATCTACATTACACCTCTAAAAGTTTTGTCCTAACGTCCTTCCCCGAATCCTTCATGCATGAATAATACTTATACACCGATAGACTAATTACCCATTTTCAACAAATTTTTATTAGTTAATCGCAAGTTATTATTAGTAGCATCATATCTTTATATAAGAAAATAACTGTTATTACAATCTATATAAACTTAATAAAGTAGACATATTATAAACCATAATCTAAGAATATTTTACACAAGTTTTTCTTATATAAAAAATATTAAATGGAAAATAAAAAGAGGAAAAAATATGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCTTTTTGTTAATTTTCTTCTTTATTTATTAATTAAATAATTTCTTTTTAATACAATCAAATTTCTCAATAACAGGGTCTTTTATTTCGATATTTTGTATTTGTTAAAGAAAATTATTGTTATAGAAAATATATAATATAAAATATAAGATTGATTTTTAAATTAAAAAATGATGTTTTAATGAAATATTGTTATCAAGAGGCGCATTCGACGATATATTTATATCTTTCCCTCATTTATAACTGTTGACACCCAATTTTGACCCCTCCACGATAGGAGTTAACTTTCGAGCTTCTTAAATTCCAAAAGATTCAAAATAATTGACTTTGTAAAATTCAAATATTTTCTCAAGTTATTTTAAATGGTTTAGTCACCCTATACGATTTTTAAATGATATGTATGCTTAGTATATCTTATAACTATCCGAAAATCAGCTCGTGAAGATTTTCATTGTTTTAGTAGGTATTTTGTTAAATTAGTTTAGTTAAATTATGGTTATAATTTTTGAATCATAAGTTTACGTTCAAACTAATTATTTTATTTTGTTAAAATTAAGAAGCTCGTAAGTTAATTATATCAATTCGTCTTATTTAATCACTAGACAAGCTTATCCTATGATCAGCTTGGCTACATTTTAATTTCTAATTAATTAATTTAAATATATGTGGCCGAAACCTAGTCAAATTGTAGACAACTTTAAGTTTGGGAACATTTATCACATTTTATTTGACCTTTTCCAGCAGCCCAAATCCGAACCGGCCCAAACTCTCTAATTCTCATGCAATACTATCAACAAATTCATTCCAATACAATTAGACTAACCCAATATTCCCAATCCATTTGTTTCAATTACCAGAAGCCCATCAGCCCACAATTCAATAACCCAACAAATATCCAGTACAATCCAACCCCTTCTCCTTGTTCAGCAAAACGACTCACAAGCAACGCGACAAAAACCAAAAAATCACGCAACTCCAGCTCGCATCAGACGCGAAATCAGCAAACACCGCGTGCTCTCCTTATCGTCTCGTACAGGCGTACCCGAACAGAGCAGGTGTCTCAATCCTGTCGCTCGCTCGTCCTTACTCATAATCGGATGGCCTTGGTTCTGAATCCGTTGAGAATTCGTACGAATTCCAGCTCCCTCGACCTTATCCATTAAGAGTTCTGAATTGTGAGGCATTCCCACATCGTTTTCCCCCTCAATTCCAACCCAGAAGTGGCCCTATATAAACCCTCTTCATTCACTGTTTTAGGAGAGGATTTTCGGAGACCAAAGAGTACCCATAAAATTTTGGGAATTCTTGGTCCCATAGTTCAAAATTTTAAAGCGTTTTGTGGCTTTCGAGTTGAAGAGGTGGAGTCGTCTTGGAAGACTCGTCGCTGCGCAGAACCAGGTAATCTTCTTGCCCTTTGTCAGTGTTGCATTCTAGAGTTGTTATTTGTTTAGATTCAATATGATTAGTGGTGTGAATGACAGTGGAAGTCTTCTTAAAGTTAAGTAAATTTTGAAGGAGTTCAAATGTTTTGCTCTGCTGAAAGTTATTTTCCATGTCAATGTGATTCTTTATTTCATCAAGTTCATAAATCCATACATGTGTTTCCACTTACTATTATCTCTATTCGGTTGGAAATTTGTGCGATATAGTTGGTTTTTTTTTTGCCTTAAGTTGTTGTGTTCTGCATAAAGATTATCACCTCGCCTTTTGCCAAAGCCTGATTTCTCGTATCTGTTTTATAAATACTAGGTTGTGCAACTGCTGTTTTGTTATATTAAGGTGAAAATTAGTTGTTGGGTTGCTTTCTTATTGTCTTCAAAACGTTTTGATTGCTATTGATATGAAAAATGTCTTTATTTCCTACCTTAGCTTCTTTGATCCATAGTTGTGCATACCTTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTTGTTGTTTTATATGGGTTAGTATCATAAACCTCTTTATTTTGTTAAGTAGCATGTTCTATGCCATCTATACTTGCTTTGTATAGTTTCTGTTCTGCGTTAATTCCTGTTGTAGATGCTTAGTTTTGTTATGTGTAATGAATAACAACTCACTGGTTTGAAAGCTTTAAATATGTAAGTTGGGTAATTGGATTCAAAACTTTGGTTCTAGTATTTTATTTCTCGTCTTAATAGTTTCTTAAATACAGGTGATTTGCTCTTTATAGTTTAGTTTTCTTAATTATATCGGAAATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCACTTCGAGTTCAATGGACTCCACTTCTCTTGCATTATTCCACTTCTTGAGTCAACCTTCTTCGGAGTCGTGAAAGGGAGTCATGTTATTGGGTTAAACACCCAAAAATCAGCAGCAACAACAGCTCCAAATAGCTCAATAAATTGGGTTTAAACACCCAAAAAATGCAACAGCAGCAGTAGCCTTAAAAGGCCAAACCTGAAGCAGCAACTACAGGTCCCCAAAGGGACACAAATTGTTGATTCAAGTCCAATTTATATAGTAATCCCGGCAGCAGCTAAGCAAGAAGCATGAAATGGGGGTTAAAAACCAAAATCGATGAAGTAACAAATCGACATTTCAGCCCCCGAAATTTCAGTTTTATAATTTATTATTTATGTTTGTCTTCTCGTTATTATTTTGGTCATTGTGAATGCTAACCCTTTGTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGAATGGCTATTCCATTTCGTTACTTGTTTACTTTATGTTTTCGAAGCTTTTTTTTAAGTTGGACAATTTAGGCCTATGAGAATAACTTGAGAACCCTTTATGTTCTTTTATAGTTATCGAAAAGCTTTGGATCCATGTTTATGAATTTAAACTAACTATATAGTTCAAGTTTTTGAATAGGAAAAAAAATTTGTCAAGTTCCTTAAACTAAATTAGTGGCTTTTTATTTTAATTTAGAGCTTTGTATGAATGACTTGAGGATCGTTAATATCCTCTTATAGTTGTTTTAAACAAGGTCTTTCAATTCACATTTATGTGTTGAAGCATTTGTGTGGTTCAAAATATGACTATGGACAAGAATTTGAGATAAATCTTAAAATTTTTAGAAGTATCAAAATACTTTTATATGAGTATCAACCAAGATTTTTTTTAATTAAATTTTTTTTTTATATATAAAATTAGCCAAATTTTTAAATCCGTTGGTCAACCGCGTGTTAGAGGATTCTCTAAGGTGCCTAAGCCCTTCCTTAGAGAATTATTTGAACCCTTACCCAAAACTCTGATTTTATGTTTTCTTTTAAACTTCCCTTTTTTATCTATTTGGTTTTCTTAATTTTTCCTAAAAGATTAAGTGGCAACTTCCTAAAATTAAAATTTTGCAAAATTGGCCAAAGTTGCGAAATTGGCTTCGAAACCCTTTAGTTTTTGAAATCGGGTCGTAACAATAACATGCACCGTCAATTTAAAAGAAGTTGAAGCTACCACTTTACTTTGAATTGTTGTTGTAAATCAATTAATTGTCTTATTTTTCCAATGTAACTTGCTTCACTTATTATGGATATCGATATGTAATAATTTTTTTGATGACATAAATAATCAAATATATAGAATATTTTTTAATAATTGAAAAGGGTCAAAAATATCCTTAAATTATCTGAAATAGCTCATATATACCTTTGAAGTATATTTCGGCTTAAATATATCCTTATCGGCAAACTATTGGGTCAAAAATACCCTTCTTATTAACCGAATCGATCAAACGTGACTTAGATGACATGTGGATGTCACATGGCATGCCACATGAGCCAATAGAATTCCACTCATGCCACATAGACTAATAAACTTATCCGTAATTTCTCCATTTTTCGTAGAATTTAGAAACCATTTTACTTGAAACATAGAACCCCTTTTCCTCATTTCTCCATTTCCTTAGAACGATTTCACAAAATACATAAGTTCTAAGGGAAGGGTATTTTTGACCCTATAGTTTGAGGGGAAGGGTATTTTTGAGCCGAAATATAGTTCAAGGATATATTTGAGTTATTCGAATGGTTCAAGAGTATTTTTGACCCACCATTCTTTTTATAATTATCAGTGTATAAAAATTAAATTCTGCTGAGAAGATAGAAAATGAAGATGCAATCTCAAATATAAAACACAATAGAGAAGGAAGGAAATGAACATGCAATCTCAAATATAAAACACATACTAGGGGTGTACAAAATCGAATCAAAAGTCGAATCAAATCAAAAATCGAATCAAATCGTAAATCGAGAAAAAAAATCCAACTAGTGATTGGTTTGACTTCATTTGGTGTTTAAAAAAGAACTCGAGTATATTTGGATTGGTTTGGTTTTAACTAAAAAAATCAACCCGAGACCAAACCAATCCAACATTATATATATAATTTAAAATTTTATTTTATACATAAAAATATTTCATTTGATATCGATTTTAAATATTTCTTATATTTTTCATAGTTTTAATCTTTTAATATATTATTTCAAGTTTGAAACTTAAAATTTTGAATGGATCCGTAAAGATTATAGTCCACAAATGTTGATAATTATAATAAAACTTCAATCAAAATCAAATTAATAGTAATGCAAAAAGGAAATCAATTTAACCCTAAGAATGACAATAATATTGAATGTTTGTTCTTTGTTTTTACATTGGTTTCGACAATTAAAATATATAATCTAATTTTAATTTTCTTTAATATTTAGTCATGTAACTAATATTTATTAAAATTATTTTAGCATAAAATAATACTTTTAAATTATGATCATTTCATTATGACTTGTTAATTGGCAATATTTGTTTTACGCGATTTTATTATCATTATATATATATATATATATATATATATATATATATATATATTGGATATTTTAGTGTCATTAACCATATCATTGTTTGTGTTATATTCTTAAGCAACACCTTCGATAGTTGTATTTTGGAAGACTGAAGAAATATTTTAAGTACAAGTAAATTTTATGTTTGTATGAATACTTCAAAGGAAAAAATCCGAAAAAACCAGAAAACCTGAAAACACGAAAAAATCCATAAAATTTGAGGTTGAAAAATCCGAGTTTTATTGGTTTGGTTTATAATTTTAAAAATCCGATACAAATAGTTTGATTTGATATTTGAAAAACTAAAACCAATCCGACCATGTACACCCCTAACACATACTATGCATTGAAAAAATAAATGATTTATTATTTTCAAGAATGTTTAATTAATTACACCATATATGTTTTTCACATAAATCCACCAAATCAATGACATGATCAATTTACTTTCTTATTCATAAAACTCCAAAATCTTATTCTAAAAACAAAGGATTATCAATAACACAACAACAAAGATCATGAAAAATTCCTCTTTTAAGAAGAACATGGACATGGAAAAGCACAACAAGGATAGCAAGGGCAACGCTCCATTCTTCGTCTTCGCAATTCATTAGTAATATTATCATCATAATTTTCGATAATTTTAGACGATGTTAATTCACCATCATCACCAGTAACGATTGAATTATCATAATTAGACGAAGAGTTACAAAGTAAGAAAAGGGTCATTAAGAATATTGTGATAAATTGAAGTATTTTTGTCATGGTTGATATAAATTCTAAAAGTTATTGATATTAATTTCCTTCATGCAAGTTGTTTATTTATAGGCATCGTTGATAATTTTTTGGTCTTTTTTTTTTCAAGATTCTTGTGATTATTTTGAAGTCGGCAATGAAGCAATATAAATACTTACTTTAGTAAAAAAAATTTGAGAAGGAAAATAAAGTTGTGGAATTTTCAAGAGAATCTTTTAGGTGGCATTAGAAAAATAAATAAGAAATATTCAATTACCCCTTTTTAATTTTACTTGACTTGATAAATCATGAGGCAATTATTCAAGGTGAAAAATAAATAAATAAATAACAATGATGATGATAAAAAGGGAAAATTATGCGGATAAGCAAACTTAAACTATTTAATTACTCATCATACCTATAATTTGTTATAATTATCACTCGTGACTAACATCATACATTGATTTGACTTCGAGTTTGTATATTTAGTCATGTTTGTATATGTATAATTCGTCAGGATATACAAATAAATAAATAAATATATATATATACACACACACACAATGTTTTAGCCTATATACATATATAATTCACCTCTCTGTCCTCTCTCGCTCGCCTCTCTCTCCCTCTCTCGATCTCGCTCGCCTCTCTCCTCTCTCTCCCAATCTCGTTTTCCATTTATACAAATGTATATGTATAATATACAGTTATATACAATTATATACAAATATAATTCACATCTCTCCCACTCTATGCCCTCTCTTGCTCGCATCTCTCGATCTCGCTCGCCGCTCTCTTGTCTCTCCCAGTATCGCTCGCCTCTATCCTCCCTCTCCCAATCTCTCTTGCCATATATACAATTACATATGTAAAATATACAATAATCAAACCAATATACATATACAATTCACCTTTCTCCCACTCTTTTTCCCCTCTCTCTCGCCTTTCTCCTCTCTCTCCCAATCTCGCTCGCCTCTCTCCTCCAAATAACTTGTAGCTACAAATGTAATTATCAAACTAAAGCTATAGAAAGTAATTAATTATTTTTAAGTGACCATATGTGAAAGTTTCCCTTAATAATAATAATGATCATAATAGCAGCACATCGAAGAATATATATTATGATTAAATGTTTCAGTAATAATAATTAATAATAATGTTGAAGTGTTATTTTGAGAAAGTAATAGAAAATACATTAATAGGAGATACTTATAAAAAAAAATCCTCCTGTTAAGCAAGGAAAGACATGATTTTTCAGTGTCAAACACTAGAAAATGACTTTCTTATCAAAAATGAATTTCATAACATCGATCCGATCTAAAAAATGAAATTATGAGAGAGACATAACATAGATAAGTAGAAGTAAAAGGAAAATATATGAAGCCATGAATATTTGGCAACAGTTAACACGAAATATTACAAACATGTTTATTGTAATCTTACAAATAATTGAAGTCTGAGAGATTTTGTGTATTTAATCTTACTTCTATCTTGTGAAGATAGAGAAGTTATTTCTGATAGACTCTCCGCTCACATAAAACATATTAAATTCAAATACAATAATAAAAAAAGTCGTACTAGAAACAATACAAACAACAATATAGTTTTACAACATAAGTAATATTAATTAATGCTTCAATTTTGCAATGCAACAAGTACAAGATCCACATTGTTCCATACAAATTCTACAATTGGCAGCAACATCAGGATGAATATCACTTGTCTTTTGGGATAAGAGGTTTCTCTGTGTTAATGGATTATCAAAAGAAATATCCCTTGAGCTATTAATTGGGTTGAAGCAAAGTGATGATAAAACAATGAAAAGGGCAAAAATTGCTATTGTGGTTCTTGCCATTGGCACTAGAAGAGAGTAGAGACTATGTGCTATATTTGAATATTTTATAGTTATGAAGTGAAATATTAACTCATTGGTCCTCCTTTATATAGAGGAAATCATGTGAAAATAAAAAGCTAGGATAGTTCAATGTATTAAATTTATAGTATGATAGAATTTTTAAAATGATCAGATCATATCTTTTGATGCAGTTCTACTTTTTATTTTTGAGAAGGGTATTTCTGCACTTTGAATTCGCAATTTTCTAATTGCACGACAATAACTTTCATCGTCAGATATGGGAGTTTTACTGTGTTTTTCGTGAGAGGTTGTTTCTGCAATTTGAACTAGTGAAGAACTACTAGTCACACGATAACAATTTTAATTTGTCATTGCACCTAGACTTCCTTTTTTATTTCATTTATGTGATTATTTTCCTTAATTATTTACTCAGTTTCGAAAAAAATGATGACTCATTTCTAAAGCCGAATACAAGTCAACATTAAACACCTATTTTATTCTTAAATATCATAAATTTATGATCATAATAATTTAAAATCACATATTTCAATTAAAACCAACAGAAACTTATCTTTTATATCAATCAATTAAATATAACCACATAAATTTATTGGGGGGGGGGGGGGGGGGGAGATTTAGATATTCAAATGATGCTTATGGATAAATGGAGGGCTAGAGCTATAATCAACTTGGTCATTGTGGTAAGACTTTGATCCAAAGCCTCTTTGTTTGAATAATATATGTAAGTAATAAATGAATTCACATGCTAGCTTTGAATTTGTATATATTGCTGATATCAGGAATGATATCATCAAGGGCATTGATGTCCAAAAGATTATACTATTAGTTATAATTGGGACAGCCAAAGAATTATTATTATTTTATTATATAATCTCTTGAATTTTGAATTTATTAGTTATGTGTGATTTATAATATTTTTTATATAATTTTTTAATTATGTAAATTATTTTTTAAATAATAAAAATATTATATTTAGTTCACATTAAACATTTAAATTAGTTTAATTTTTGTATTCTGAATAAGAAAAAAAACATTTTGTGACGGAGGGAGCATTTGATTATAGTATATATTCTTCATAGTCTTAATTAATTGATGATTTTTTTCTTTATTTTTCTTTCTTAAATTTTATGTATAATTAAATATTTCGCGAAAAAAAGTAATTTTGATTTAAGAAATACAATTTACTTTTTCCTTATATGGTAAATCTTTACCATTAATATTCTTTTCTTTTAACTTTTATATCTCAAGAACATTACAAGATAGATAAAATGTACTCCATTTATCATTTCATTAGGAGTCATCTTGGGATGACTTAACATAATTGAGAGCTTAAAGCAAATAAGTAGAAGAGTTTAAAACAAAACAAATTACTATAGATGGGTGGTTAACTCATGTTATTTAAAAAAAAAAAATAACCAAATAAACAGACAGACGATATAAATAAACGACAGAAATTTCAATATAACATCGTTCAATACAAAATAGTATATATAACGACATATATCAATAATTAGGATAGTTACATCAAGTAAATGTACGTATTAGCTAGTTGTTTATTAAAAAAAAAAAAAAGACAACATGTTACAGATCAACAATGGTTAACGTTTTCCCTCAACAACAAATGTCACAATCTACGCACCCACATTGTACGCAACAACCACACATAAGTTGAGGCAACATTTTTCTTGACATGATATAATCATATGAAGAAGAAGAAGAAGCAGTGCTAATTGCAAAACATATTATCAAAATTGTAACAAAAAGAAGTATAGTTTTTTTATCCATAGCAAATGTGTATTGTGCAACTATGATGAAATTAAGACCTACAATTTATAGTTTGTATTGATATCCCTTCTTGTATTTATTTAATCCATATTTTCTTTTATAAGCAACCAACTTGATTATAGTTAAATTAGAAAAGTTAATGATAGTATTATCACCTAGTCAACTAAATTTTTGTTTTATTAACAAGTTGATTATTAAATTAGCAACCAAATGTTGCACATGAACATTACTGTCACGACCCAAATCCGGGCGCGACTGGCACCCACACTTATCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATATAATATAAACAGAAAGTAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCCGGAAGTCATCATCACAAGAACATCTACTTTAAACTACTAATTCTAAGAGTTTCTAAGAAGCT-AAAAA-TACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAGAAGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGATTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACAAGAAGGAAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAGAACAGTATATATCAAGTAATATCATAAATCAACTATAAAACTCAACATGTAGCAACAACAAGTACTATAATCATCAGTAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTAAGTTTTATTAAATTGAATATATTATCATCTTCCAAGATTCATTATCTTTCTTCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACTACTATGTGTCGGTACGTGACACTCCGATCCCCTAATTCTATGTGTCGGAACGTGACACTCCGATCCCCTACATGTGTCGGTACGTGACACTCCGATCCACTAATACTATGTGTCGGTACGTGACACTCTGATCCCCTAATTCTATGTGTCGGAACGTGACACTCCGATCCTCTACATGTGTCGGTACGTGACACTCCGATCCCCTACATGTGTCGGAACGTGACACTCCGATCCCCTACATGTGTCGGTACGTGACACTCCGATCCCCTAATTCTATGTGTCGAAACGTGACACTCCGATCCACTAATACTATGTGTCGGTACGTGACACTCCGATCCACTAATACTATGTGTCGGAACGTGACACTCCGATCCACTAATACTATGTGTCGGAACGTGACACTCCGATCCACTAATATATTCTGTAAATCATCAAGCCTTCTCTATACCAAGGCATCATCAATCCCATTACTTTAATTCATCAAGCTTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCTTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCATGCAAACATACCATTAAGCATATAGTAGGGCTTACAATACTACCAATACATATCATTCACTATTGAGAGTTTACTTATGAAAGCATGAAAACCATAACCTACCTTCACCGAAGAATTGGAATCAACAAGCAATTTCCCAAGCTTTGATATTCCCTCTGCCTCTTGATCGATCAATTTCTCTCTCTCCTTGTTCTCTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAGTTAACATATAATTAAGTGTAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACAAAATCTATAATTAAGGAAGGAATAGTCCAAAAACGTCCCTTAAAACGTGTAAGGAAATCCGATTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGAGTCAGAGAGTCAATTTCCACTGAACAATCTATGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCCATTCCGTCACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCAACGGTCCGTCGTGCCCATGACGGATCGTCGTTTGGTCCGTCGCCTCAGCCTATTTTTCCAGAATTGAAGTTTGTTGCTCAAAACGACTAAACAGGTCGTTACAATTACTTGAATACTTATATTTTAAACGTTTAATTTATAGATAGCCCGATAAAATTGTATATTCAGTGAAATTATATTTTGATTTGTAAAATTTATTGTGAAATATAATCATTATGCAAGTAGAAAAGTAATTAACAACTGGCAGTTGAGTTGTATTTCAATAAACATTTGGTGATAGTTCATATATGAATCAACAAACTTGATGATTTAGATATAAAATTCAAAAAAAAAATATTATTATATTTCACTGTATATTTTATTATTTTTCGCAATTATTTAAAATCTAAAGCTTTAACTAATAACTAAAACATAACAATTAGAAAATGTTTTGTTACATCACAAGGGAATTTCGGACCAATGATAAAATTATCTTTTGTGTGATTTATAGATTACGTGTTTGGGTCCTACAATCACTAAATATTTATATAAGGATTGATTATCTACATCACACCCCTTAAAAGTAGAGTAAATTTTACGTTTAGCAAACATAAAAATCATATTTGTGTGTTATAGCTATAGTTTGTATGATTGTGCTCCATAGCAAACTAATTTATGTTTACTATGGAACATCATATTTGTATAAATCCATGGGGGCATCAGATTTGTATAAATAATTTGCAGCCTCATATTTGTATAAATCACTGACAACCTCTCGTTTGCATAAATCGTTGGCAGTTGCTCCATTCAATTTTATGTATTAGTAGATCTGCATAAAATTTGAATTTGTATACAACTGAATCGGAATAAAACATTTGAATATCACGTCTCTCTTTCTCTTTATACAACACAAATTATAAATTGTAATTTTTATAATTTATGTTTGTATAAAGCGAGAAAGAGAGAAAGACAAAAGAAAACTGGCAGGGGAAGATCTGTATTTGTATAATTATAATTGTATAAGACGAAAATATATATATTTGTATTTGTATATACACTTTTCTCTCGCTTTATACAAACACAAATGTGTTTTATACATTTGTGTTTGTATAAAGTGAGAGAGGCGATGGAGAGACTAGAGAGCGAGAGAGGGAGAGTGTCGAGCGAAAAAGCTGGGGAGAGAGGTGAATGACAACTGTTTGCTATGGTTTACAATTAAATCAAATTATGGTTATAGCATTTAACTTAAATTAATAGTTCACTATTTTATACAATAAAAGTATTGTCCTAATATCCTTCCGCGAATCCTACATGAATGAAGGATACTTTATACATCGATAGGTCGATTACCCTTTTTTAAAACATTTTTTTAATTAGTTTATCGAGTCCTACAATCACTAATGTTATTATAACCTTTTTTTAAATGTTATTATAACCTATCTAAACTTAATAACGCAAAAATGTTATAAACCATGTCTGAAAATATTTTTGAGAGAATTTTTTTTTTATATAAAATAAAAAGAGAAAAAAATATGCACCAGCCAAGAATCGAGCCTGGGTCTAATTAGAAAAGTTAATGATAGTTTTATCACTTAGTCAACTAAATTGTTGTTTAATTAGCAAGTTGATGATTTAATTAGCAACCAACATGTTGCACATGAACCACACACCATCTCACTTGAATATTTATATTTTAAATGTTTAATTTATAGATAGTTCCTAAAGTTGTGCATTCATTAAAATATTTTGATTTGTAAAATTTATTGTGAAATATTATAGGAAAAATAATTAATAACTCATAGTTGAGTTGTGTTTTAATAAATATTTGATGATAGTACATAGAGTCACAAATCTGATAGTTTAAATATAAAATTTAAAAAATCATGCTATGTTAGATATGTTTTTAACATTTAACTCTAAAGTAACCGAAAAAGGCAGAGGAGTGGGGGAATAATGAACTTTTACATATTGAAGAGTGCCCAAGTACAAAAGCTGAACATAAAAGAGTTTAATTTTTATACACTAAATAATATAAATAATAATATCAATTCAAAACATATACAACTTTAGAAGTTATTAAACCTATTCTAGTTCCACCATTGCATAAGATAGTACATGATTGGATTGGTTCGGATTTTTAAATATCAAAATCAAATCATTCGTGTAAAAAATTTAAATGTATAAATCAAATCAAACTAATAAAATTTAGTTTTTTTGTCACGACCCAAAACGGGTCGCGAGTGGCACCCACACTTATCCTACTATGTGAGCGAACCAACCAATCTAAACCCCAACATTTTCAAACATAGTAAACAGAATAAAATGCGGAAGACTTAAAACTCAATAATAACTTCTAAAACTCAAAATAGAAAACAGTATATATCAGATAATATCATAAAATCAACTACAATACTCAACATGCGGCATTTACAATTACCATAACCCTTGGTCACAACACCAAGCTCATCAAAGAGGACTCACGCCTCCCCATCATACTCATTTGGGAATTAGGTTCATTA</genome_strand>
        <mrna_strand>GTCGTTGCTCTAGTTCTACCCATCTG-GCAAGAGAGTGAGNATGGTCAGATACCAATTCGTATCGCTTAGATACCAATTGACTCGAAGTAGTAGCACGAAAGAAAGAATGAAAGAGTGAAGTTTTCCTAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAAGCGTCCCCCTACCGTTCCTTAAGACTCTACTAGACTTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTTGTCACGACCCAAATCCGGGCCGCCACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAGCAACAGAAAGTAATGCGGAAGACTTAAACTCATTAATAAAATCAATAACTACTATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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GAAGGAGAAGATCCAGTCCAAGCTAGAAGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGACTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACAAGAA-GAAAAACATAAAAGTAGGGGTCAGTACAAAACACGGCTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATGTATTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATCATAAAATCAACTAATATCCTTAACATGCAGCATTTATAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335079" ref_strand="+" ref_description="SGN-U335079        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="22102" stop="23216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22402" g_stop="22714" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335079" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>313</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22402" e_stop="22714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGATGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACAACT</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATAT--CAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316321" ref_strand="+" ref_description="SGN-U316321        Tomato 200607 #1 [16 ESTs aligned]">
      <seq>caattcgcatcagacgcaaaaccagcaaacatcgcgtgctatccttatcctctcgtacaggcgtactcaaacagagcaggtgtctcaatcttgtcgctcgctcgtccttactcataatcggacggccttggttctcaatccgttgagaattcgtacgaattccagctccctcgaccttatccattaagagttctgaattgtgaggcattcccacatcgttttccccctcaatttcaacccagaagttgccctatataaaccctcttcattcactgtttaggagaggattttcggataccaaagagtacccataaaattttgggaattcttggtcccatagttcaaaattttaaagcgttttgtggctttcgagttgaagaggtggagtcgtcttggaagactcgtcgctgcgcagaaccaggtaatcttcttgccctttgtcagtgttgcattctagagttgttatttgtttagattcaatatgattagtggtgtgaatgacagtggaagtcttcttaaagttaagtaaattttgaaggagttcaaatgttttgctctgctgaaagttattttccatgtcaatgtgattctttatttcatcaagttcataaatccatacatgtgtttccacttactattatctctattcggttggaaatttgtgcgatatagttggttttttttttgccttaagttgttgtgttctgcataaagattatcacctcgccttttgccaaagcctgatttctcgtatctgttttataaatactaggttgtgcaactgctgttttgttatattaaggtgaaaattagttgttgggttgctttcttattgtcttcaaaacgttttgattgctattgatatgaaaaatgtctttatttcctaccttagcttctttgatccatagttgtgcataccttagcaatattacataaccatgttttttccccagacgttgctggttgctttcctttctgttagattttgaattaaatgcttcaggatatgcatgtcgttttaatatttgatagtatgatttctttgttttgttgttaactttttttaaaacttagatgaatcctttggaggttttcgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="32226" stop="34943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32526" g_stop="33570" g_length="1045"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1044" r_length="1044" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33571" i_stop="34589" i_length="1019">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34590" g_stop="34642" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1045" r_stop="1097" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U316321" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>1098</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32526" e_stop="33570"/>
          <exon e_start="34590" e_stop="34642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCTCGCATCAGACGCGAAATCAGCAAACACCGCGTGCTCTCCTTATCGTCTCGTACAGGCGTACCCGAACAGAGCAGGTGTCTCAATCCTGTCGCTCGCTCGTCCTTACTCATAATCGGATGGCCTTGGTTCTGAATCCGTTGAGAATTCGTACGAATTCCAGCTCCCTCGACCTTATCCATTAAGAGTTCTGAATTGTGAGGCATTCCCACATCGTTTTCCCCCTCAATTCCAACCCAGAAGTGGCCCTATATAAACCCTCTTCATTCACTGTTTTAGGAGAGGATTTTCGGAGACCAAAGAGTACCCATAAAATTTTGGGAATTCTTGGTCCCATAGTTCAAAATTTTAAAGCGTTTTGTGGCTTTCGAGTTGAAGAGGTGGAGTCGTCTTGGAAGACTCGTCGCTGCGCAGAACCAGGTAATCTTCTTGCCCTTTGTCAGTGTTGCATTCTAGAGTTGTTATTTGTTTAGATTCAATATGATTAGTGGTGTGAATGACAGTGGAAGTCTTCTTAAAGTTAAGTAAATTTTGAAGGAGTTCAAATGTTTTGCTCTGCTGAAAGTTATTTTCCATGTCAATGTGATTCTTTATTTCATCAAGTTCATAAATCCATACATGTGTTTCCACTTACTATTATCTCTATTCGGTTGGAAATTTGTGCGATATAGTTGGTTTTTTTTTTGCCTTAAGTTGTTGTGTTCTGCATAAAGATTATCACCTCGCCTTTTGCCAAAGCCTGATTTCTCGTATCTGTTTTATAAATACTAGGTTGTGCAACTGCTGTTTTGTTATATTAAGGTGAAAATTAGTTGTTGGGTTGCTTTCTTATTGTCTTCAAAACGTTTTGATTGCTATTGATATGAAAAATGTCTTTATTTCCTACCTTAGCTTCTTTGATCCATAGTTGTGCATACCTTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTTGTTGTTTTATATGGGTTAGTATCATAAACCTCTTTATTTTGTTAAGTAGCATGTTCTATGCCATCTATACTTGCTTTGTATAGTTTCTGTTCTGCGTTAATTCCTGTTGTAGATGCTTAGTTTTGTTATGTGTAATGAATAACAACTCACTGGTTTGAAAGCTTTAAATATGTAAGTTGGGTAATTGGATTCAAAACTTTGGTTCTAGTATTTTATTTCTCGTCTTAATAGTTTCTTAAATACAGGTGATTTGCTCTTTATAGTTTAGTTTTCTTAATTATATCGGAAATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCACTTCGAGTTCAATGGACTCCACTTCTCTTGCATTATTCCACTTCTTGAGTCAACCTTCTTCGGAGTCGTGAAAGGGAGTCATGTTATTGGGTTAAACACCCAAAAATCAGCAGCAACAACAGCTCCAAATAGCTCAATAAATTGGGTTTAAACACCCAAAAAATGCAACAGCAGCAGTAGCCTTAAAAGGCCAAACCTGAAGCAGCAACTACAGGTCCCCAAAGGGACACAAATTGTTGATTCAAGTCCAATTTATATAGTAATCCCGGCAGCAGCTAAGCAAGAAGCATGAAATGGGGGTTAAAAACCAAAATCGATGAAGTAACAAATCGACATTTCAGCCCCCGAAATTTCAGTTTTATAATTTATTATTTATGTTTGTCTTCTCGTTATTATTTTGGTCATTGTGAATGCTAACCCTTTGTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGA</genome_strand>
        <mrna_strand>CAATTCGCATCAGACGCAAAACCAGCAAACATCGCGTGCTATCCTTATCCTCTCGTACAGGCGTACTCAAACAGAGCAGGTGTCTCAATCTTGTCGCTCGCTCGTCCTTACTCATAATCGGACGGCCTTGGTTCTCAATCCGTTGAGAATTCGTACGAATTCCAGCTCCCTCGACCTTATCCATTAAGAGTTCTGAATTGTGAGGCATTCCCACATCGTTTTCCCCCTCAATTTCAACCCAGAAGTTGCCCTATATAAACCCTCTTCATTCACTG-TTTAGGAGAGGATTTTCGGATACCAAAGAGTACCCATAAAATTTTGGGAATTCTTGGTCCCATAGTTCAAAATTTTAAAGCGTTTTGTGGCTTTCGAGTTGAAGAGGTGGAGTCGTCTTGGAAGACTCGTCGCTGCGCAGAACCAGGTAATCTTCTTGCCCTTTGTCAGTGTTGCATTCTAGAGTTGTTATTTGTTTAGATTCAATATGATTAGTGGTGTGAATGACAGTGGAAGTCTTCTTAAAGTTAAGTAAATTTTGAAGGAGTTCAAATGTTTTGCTCTGCTGAAAGTTATTTTCCATGTCAATGTGATTCTTTATTTCATCAAGTTCATAAATCCATACATGTGTTTCCACTTACTATTATCTCTATTCGGTTGGAAATTTGTGCGATATAGTTGGTTTTTTTTTTGCCTTAAGTTGTTGTGTTCTGCATAAAGATTATCACCTCGCCTTTTGCCAAAGCCTGATTTCTCGTATCTGTTTTATAAATACTAGGTTGTGCAACTGCTGTTTTGTTATATTAAGGTGAAAATTAGTTGTTGGGTTGCTTTCTTATTGTCTTCAAAACGTTTTGATTGCTATTGATATGAAAAATGTCTTTATTTCCTACCTTAGCTTCTTTGATCCATAGTTGTGCATACCTTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316320" ref_strand="+" ref_description="SGN-U316320        Tomato 200607 #1 [11 ESTs aligned]">
      <seq>ttagcaatattacataaccatgttttttccccagacgttgctggttgctttcctttctgttagattttgaattaaatgcttcaggatatgcatgtcgttttaatatttgatagtatgatttctttgttgttttatatgggttagtatcataaacctctttattttgttaagtagcatgttctatgccatctatacttgctttgtatagtttctgttctgcgttaattcctgttgtagatgcttagttttgttatgtgtaatgaataacaactcactggtttgaaagctttaaatatgtaagttgggtaattggattcaaaactttggttctagtattttatttctcgtcttaatagtttcttaaatacaggtgatttgctctttatagtttagttttcttaattatatcggaaatggataagaagcctcttgtttgttcttatgttagatattattctcttttaggtctagtcgatttgttttctttttaaatgccccgtgtaattcaaattatctcaaggtttctttgcttctcaaatagatgttggtctcattttgatttttaatgtgagctcatttaaagttcctttccattttgtgtcttaaactgtttatttgagatatgttatctagttttgaatgttcactggcttagattaatattatttatgattgattctaattcttatcttttcttccttttctctactctgcatgagcacttcgagttcaatggactccacttctcttgcattattccacttcttgagtcaaccttcttcggagtcgtgaaagggagtcatgttattgggttaaacacccaaaaatcagcagcaacaacagctccaaatagctcaataaattgggtttaaacacccaaaaaatgcaacagcagcagtagccttaaaaggccaaacctgaagcagcaactacaggtccccaaagggacacaaattgttgattcaagtccaatttatatagtaatcccggcagcagctaagcaagaagcatgaaatgggggttaaaaaccaaaatcgatgaagtaacaaatcgacatttcagcccccgaaatttcagttttataatttattatttatgtttgtcttctcgttattattttggtcattgtgaatgctaaccctttgttttgttgttaactttttttaaaacttagatgaatcctttggaggttttcgaaaaaaaaaaccatttctttacttgtttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="33146" stop="34943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33446" g_stop="34670" g_length="1225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1225" r_length="1225" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U316320" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1225</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33446" e_stop="34670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTTGTTGTTTTATATGGGTTAGTATCATAAACCTCTTTATTTTGTTAAGTAGCATGTTCTATGCCATCTATACTTGCTTTGTATAGTTTCTGTTCTGCGTTAATTCCTGTTGTAGATGCTTAGTTTTGTTATGTGTAATGAATAACAACTCACTGGTTTGAAAGCTTTAAATATGTAAGTTGGGTAATTGGATTCAAAACTTTGGTTCTAGTATTTTATTTCTCGTCTTAATAGTTTCTTAAATACAGGTGATTTGCTCTTTATAGTTTAGTTTTCTTAATTATATCGGAAATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCACTTCGAGTTCAATGGACTCCACTTCTCTTGCATTATTCCACTTCTTGAGTCAACCTTCTTCGGAGTCGTGAAAGGGAGTCATGTTATTGGGTTAAACACCCAAAAATCAGCAGCAACAACAGCTCCAAATAGCTCAATAAATTGGGTTTAAACACCCAAAAAATGCAACAGCAGCAGTAGCCTTAAAAGGCCAAACCTGAAGCAGCAACTACAGGTCCCCAAAGGGACACAAATTGTTGATTCAAGTCCAATTTATATAGTAATCCCGGCAGCAGCTAAGCAAGAAGCATGAAATGGGGGTTAAAAACCAAAATCGATGAAGTAACAAATCGACATTTCAGCCCCCGAAATTTCAGTTTTATAATTTATTATTTATGTTTGTCTTCTCGTTATTATTTTGGTCATTGTGAATGCTAACCCTTTGTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGAATGGCTATTCCATTTCGTTACTTGTTTA</genome_strand>
        <mrna_strand>TTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTTGTTGTTTTATATGGGTTAGTATCATAAACCTCTTTATTTTGTTAAGTAGCATGTTCTATGCCATCTATACTTGCTTTGTATAGTTTCTGTTCTGCGTTAATTCCTGTTGTAGATGCTTAGTTTTGTTATGTGTAATGAATAACAACTCACTGGTTTGAAAGCTTTAAATATGTAAGTTGGGTAATTGGATTCAAAACTTTGGTTCTAGTATTTTATTTCTCGTCTTAATAGTTTCTTAAATACAGGTGATTTGCTCTTTATAGTTTAGTTTTCTTAATTATATCGGAAATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCACTTCGAGTTCAATGGACTCCACTTCTCTTGCATTATTCCACTTCTTGAGTCAACCTTCTTCGGAGTCGTGAAAGGGAGTCATGTTATTGGGTTAAACACCCAAAAATCAGCAGCAACAACAGCTCCAAATAGCTCAATAAATTGGGTTTAAACACCCAAAAAATGCAACAGCAGCAGTAGCCTTAAAAGGCCAAACCTGAAGCAGCAACTACAGGTCCCCAAAGGGACACAAATTGTTGATTCAAGTCCAATTTATATAGTAATCCCGGCAGCAGCTAAGCAAGAAGCATGAAATGGGGGTTAAAAACCAAAATCGATGAAGTAACAAATCGACATTTCAGCCCCCGAAATTTCAGTTTTATAATTTATTATTTATGTTTGTCTTCTCGTTATTATTTTGGTCATTGTGAATGCTAACCCTTTGTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGAAAAAAAAAACCATTTCTTTACTTGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335597" ref_strand="+" ref_description="SGN-U335597        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gcacgagaaactaaactataaagagttaatggataagaagcctcttgtttggggttatgttagatattattctctttcaggtctagtcgatttgttttctttttaaatgccccgtgtaattcaaattatctcaaggtttctttgcttctcaaatagatgttggtctcattttgatttttaatgtgagctcatttaaagttcctttccattttgtgtcttaaactgtttatttgagatatgttatctagttttgaatgttcactggcttagattaatattatttatgattgattctaattcttatattatgttacttttctctactctgcatgagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="33543" stop="34467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33858" g_stop="34167" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="337" r_length="310" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335597" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>310</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33858" e_stop="34167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCAC</genome_strand>
        <mrna_strand>AATGGATAAGAAGCCTCTTGTTTGGGGTTATGTTAGATATTATTCTCTTTCAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATATTATGTTACTTTTCTCTACTCTGCATGAGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330306" ref_strand="+" ref_description="SGN-U330306        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>caagaaccacaatagcaatttttgcccttttcattgttttatcatcactttgcttcaacccaattaatagctcaagggatatttcttttgataatccattaacacagagaaacctcttatcccaaaagacaagtgatattcatcctgatgttgctgccaattgtagaatttgtatggaacaatgtggatcttgtacttgttgcattgcaaaattgaagcattaattaatattacttatgttgtaaaactatattgttgtttgtattgtttctagtacgactttttttattattgtatttgaatttaatatgttttatgtgagcggagagtctatcagaaataacttctctatcttcacaagatagaagtaagattaaatacacaaacgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="39661" stop="38676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39361" g_stop="38976" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="389" polyA_stop="406"/>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U330306" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39361" e_stop="38976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAACCACAATAGCAATTTTTGCCCTTTTCATTGTTTTATCATCACTTTGCTTCAACCCAATTAATAGCTCAAGGGATATTTCTTTTGATAATCCATTAACACAGAGAAACCTCTTATCCCAAAAGACAAGTGATATTCATCCTGATGTTGCTGCCAATTGTAGAATTTGTATGGAACAATGTGGATCTTGTACTTGTTGCATTGCAAAATTGAAGCATTAATTAATATTACTTATGTTGTAAAACTATATTGTTGTTTGTATTGTTTCTAGTACGACTTTTTTTATTATTGTATTTGAATTTAATATGTTTTATGTGAGCGGAGAGTCTATCAGAAATAACTTCTCTATCTTCACAAGATAGAAGTAAGATTAAATACACAAA</genome_strand>
        <mrna_strand>CAAGAACCACAATAGCAATTTTTGCCCTTTTCATTGTTTTATCATCACTTTGCTTCAACCCAATTAATAGCTCAAGGGATATTTCTTTTGATAATCCATTAACACAGAGAAACCTCTTATCCCAAAAGACAAGTGATATTCATCCTGATGTTGCTGCCAATTGTAGAATTTGTATGGAACAATGTGGATCTTGTACTTGTTGCATTGCAAAATTGAAGCATTAATTAATATTACTTATGTTGTAAAACTATATTGTTGTTTGTATTGTTTCTAGTACGACTTTTTTTATTATTGTATTTGAATTTAATATGTTTTATGTGAGCGGAGAGTCTATCAGAAATAACTTCTCTATCTTCACAAGATAGAAGTAAGATTAAATACACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="115980" stop="77363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79099" g_stop="77663" g_length="1437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79099" e_stop="77663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATGAAGTAATTCACAATGTAAATTTAGACCATTACCAAATGAGGAAGATACATAAGAAATTGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCTACTTCAGATCTCCAAGGGAAAGCGTAGCAATGGGCCCTCTCACCCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTACAGGTTGCCCATCACCTCGGCCGTTCTGGTGGCCACCATTACCTCGGCCACCATATTTTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGATAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTAGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAACTGCGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCCCTTTGATGTCGATGCCATGGTGAATTCATATGGCTTCACTCCTTCCACCTCTACCACAAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGGAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAACGTCCGGGGGATATACTTCTCCATAAACAAGTTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAATATGCGACCGCCACCACATTTTGGTGTTCCCTTGAAACTGATAAGTCACAAATTCCACACAAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAAAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGCACTTCTGAAACTGGAGATGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATTAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGACAATCGCTCATTCTGCACTTGTTCATTTTCCCCAT-CCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="77986" stop="116574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78286" g_stop="78458" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78459" i_stop="79202" i_length="744">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79203" g_stop="79730" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="78286" e_stop="78458"/>
          <exon e_start="79203" e_stop="79730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTCCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCATTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTGGTAGATTTTGTGGTAGAGGTGGAAGGAGTGAAGCCATATGAATTCACCATGGCATCGACATCAAAGGGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACGCAGTTCGACCCATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCCGACCGGTCAACACTTCTCTGAGAGACCTATGCATGAACCTAGAGAGTGCTATGGATGTGGGGAGATTGGACATATTAAGAGATATTATCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAAAATATGGTGGCCGAGGTAATGGTGGCCACCAGAACGGCCGAGGTGATGGGCAACCTGTAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACGGGTGAGAGGGCCCATTGCTACGCTTTCCCTTGGAGATCTGAAGTAGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACAATTTCTTATGTATCTTCCTCATTTGGTAATGGTCTAAATTTACATTGTGAATTACTTCATATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCCTGTTTGGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTATGGGTATGACTTGGCTTTTTTCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCGGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTGTTGAACAAAAGCTTCATTAGACCAAGTGCATCCCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335930" ref_strand="+" ref_description="SGN-U335930        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 7e-35, score=150)">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="79403" stop="78245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79103" g_stop="78545" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335930" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79103" e_stop="78545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATGAAGTAATTCACAATGTAAATTTAGACCATTACCAAATGAGGAAGATACATAAGAAATTGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCTACTTCAGATCTCCAAGGGAAAGCGTAGCAATGGGCCCTCTCACCCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTACAGGTTGCCCATCACCTCGGCCGTTCTGGTGGCCACCATTACCTCGGCCACCATATTTTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGATAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTAGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAACTGCGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="80013" stop="78656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79713" g_stop="78956" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79713" e_stop="78956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCTTTTGTTCAACAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCCGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGAAAAAAGCCAAGTCATACCCATAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATGAAGTAATTCACAATGTAAATTTAGACCATTACCAAATGAGGAAGATACATAAGAAATTGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="80082" stop="78824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79782" g_stop="79124" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79782" e_stop="79124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCTGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCTTTTGTTCAACAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCCGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGAAAAAAGCCAAGTCATACCCATAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="80602" stop="79290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80302" g_stop="79590" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80302" e_stop="79590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGCCTCAATCTTAGAAGGATCTACCATCACCTCATCCTTCGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTGGAGAATTTGGCATAAAGCCTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGTTCTTCATGTTCCTCCTTACTTTTAAAGTATATCAGTATATCATCAATAAATACGATCACAAATAGATCCAGATATGGCTTAAAAATCCTGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCATAATGGCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCCCAGGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCTGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCTTTTGTTCAACAACTC-TTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340455" ref_strand="+" ref_description="SGN-U340455        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | villin 2 (VLN2), nearly identical to villin 2 (VLN2) (Arabidopsis thaliana) GI:3415115 | chr2:17417793-17424667 REVERSE | Aliases: T11A7.16, T11A7_16(evalue: 1e-17, score=60.5) genbank/nr: gi|5880464|gb|AAD54660.1| actin bundling protein ABP135 [Lilium longiflorum] (evalue: 1e-18, score=63.9)">
      <seq>aatggccggtgcctcccttcttcatctgtcaaagactcaatttttttcaacattttaatatcttcttcttcttcatagtttctctctctacacctctgtctccataaaaatatataaatttgtctgaatttttcttcttttttttgttcttgattttcgtatatatatactgtctctctgtatatctgcaaaaaaaaagaatatcaaaaaaataattagtacagtacaatcattttccaggcaaaggaagaaaaggggaggtccaaaatatacaatcttggaaccccattacttcaattattcacttcctttttggtgtaccactttttcatattttgccagctttgcataacccctttttcttctgtgttttgaatacccttttggtttttcttctctgaggagggagagtttttgctgcatagatctctctgtagaggaggaatagttggttttgtcagaatattgagatagctgtggttagaaacttcagcattccagtttcctttgttgaaagaagtggtaacaaggaggactttgcacaatgtctggctctgtgaaaactttggatcctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="95695" stop="98790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95995" g_stop="96440" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96441" i_stop="98361" i_length="1921">
            <donor d_prob="0.721" d_score="0.98"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98362" g_stop="98490" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="577" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U340455" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95995" e_stop="96440"/>
          <exon e_start="98362" e_stop="98490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGCCGGTGCCTCCCTTCTTCATCTGTCAAAGACTCAATTTTTTTCAACATTTCAATA---TCTTCTTCTTCATAGTTTCTCTCTCTACACCTCTGTCTCCATAAAAATATATAAATTTGTCTGAA-TTTTCTTCTTTTTTTTGTTCTTGATTTTCGTATATATATACTGTCTCTCTGTATATCTGCAAAAAAAAAAAGAATATCAAAAAAATAATTAGTACGGTACAATCATTTTCCAGGCAAAGGGAGAAAAGGGGAGGTCCAAAATATACAATCTTGGAACCCCATTACTTCAATTATTCACTTCCTTTTTGGTGTACCACTTTTTCATATTTCGCCAGCTTTGCATAACCCCTTTTTCTTCTGTGTTTTGAATACCCTTTTGGTTTATCTTCTCTGTGGAGGGAGAGTTTTTGCTGCATAGATCTCTCTGTAGAGGAGGAATAGGTGTGTTTTCTTAATCATTTTGAGGGTTTTTGATCATTTGGGGTTTTTCGATTGTCCTTGCTCAGATCTTGTTTTTGTGAATTGAATTGATGTGATGTGTTTATTTTGGTCTAATTATTTTGTTGTTGTTGTTGTTGTTGTTTTTGAATAATCTGATGAGTGAAGATCTGTGCTTTAGTTTAGTTTTGAGGTATTGAGGAATTTGATTAATTGATATGCTGGATTTTGTTTGATCTGTTCATTCTATTGGTTGATTAAAGATGAACTCTTTTGTTTAAATTTGTCAAATGTTGTTTTGGAGAATGGTCATTTGACTTTTGTTTTTGGTTAAAATTTGTGAATTTTGGATGAGTATGTTTGATTATTAGGTGATCTTGCAAAAGATCATTACTTTCTGGTGTATGTTATGTATGAATTTTGATGAACTGATTATTGAGTTTTTGAATGGAGCGGAATGGATATTGAGGATTCATGTAGCTGATCCCAGCTTAGCTTGGGATCGAGGTCTACTAGTAGTTACTTAGATTGGGCTATAGGAAAGTTAAGTTAAGAAGCATGCAATGTTGCTGATGTAACAATGCTTCTCTGCGTCCTTGATAGTTCGTCTCATTCTGAGCATAGCTGGTTCAATGAGCATAGAGGAAGATATGTTAATTGAGGATGTTTGTTGTATATCTTTTACCGGTTTCTTAATTGTTTGGAATTTGCAGTGAATTAATGTTGGTGATGGATTTACTGTTAGTCTGTTTTTTAAAACAGAGAGTTCTATAGGAAGTTGCCAAAAGCAGAAGACGGAGGAACTTTTAAAGTGTGCAAGAGAGCCAAAGGAAAACTAAGAAGGCTATGAGTAAAGCTAGAGGGGAAGCTCAAGATGGCTGGTACCAAAAGTTAGGGACACGAGAAGGGGAGAAAGACATGTTTAAACTAGCATGATTGATTAATAAAAAGGATAAGAATTTAAACATGGGGAAGTGTATTGAAGATGATTCTCACCAAGTGTTGATAGTAGATAGGTCAATGAGAGATAGAGAGTTGATCACTTGTTCAACTCGAACCAAAAGAATAACATTTTGGACCTCCACACGTCCGTACACGATAGAAACTGTAGTTACACTCGTAGAATTAGGCCGACAGGAGTAAATGATGCCATGAGAAATATGAGGACTAGAAAAGCGTGTTGGCATAATATTATTCCCTCATGGGTATGGAAGTGTTTCGGAGAGGTTGGAGTATAATAACTAACTGAGCTATTGAATGCAATACTAAGAAGTGGTAGAATTTCCAACGAGTGGAGAAAGGTGGTAGAATTCCCAATGAGTGGAGAAAGAGTATTGATTTCAAGGGGATGAAGTTGATTTAAAATCACATAGAAGGAAGTTGTCTCAAAAGAATTGCAATTTCTTGAAATAAATGCAGACTTAGGTAAAGATAGGTTATAATGGAAGATATAGATGTCTACTGGTTGAGAAAAGGTTTTGGTCTTGTTAGTATGTTGATTTTGAGCTTATTGCTTTTGTAGGATATTTGACCTTATCATAGATTTCACTATATATAATTTATTCTCTGTTTTTCTTTTGGTATGGTATGACATGATCTGAACTTAAATGGGAAAAAACTTGGTCGGTGAGGACTCATAAAGCTGATTCTAACTTGTATGGGACTGACACGTAGTAGTAGTGGTAGTAGTGCTTGTAGTATGATTTCTAGCTTCTTAATAAGTTGTGGAACAAACATTGGGAAGTTGAAGAAACTGTATCATGGCTTCAAATATGAAGAACTTTCTGTTTTAGGATTGATTTGTTCTTATGAAGATTTCATTCTGATGTGTTACTGTAAACATCAATTTATTTCCTAAGTTGTTGCATTTTCAATTTGGTCTATATTCCACTAATACTTATTACTCTCATTTTCCATTTTACAGTTGGTTTTGTCAGAATATTGAGATAGCTGTGGTTAGAAACTTCAGCATTCCAGTTTCCTTTGTTGAAAGAAGTGGTAACAAGGAGGACTTTGCACAATGTCTGGCTCTGTGAAAACTTTGGATCCTGCA</genome_strand>
        <mrna_strand>AATGGCCGGTGCCTCCCTTCTTCATCTGTCAAAGACTCAATTTTTTTCAACATTTTAATATCTTCTTCTTCTTCATAGTTTCTCTCTCTACACCTCTGTCTCCATAAAAATATATAAATTTGTCTGAATTTTTCTTCTTTTTTTTGTTCTTGATTTTCGTATATATATACTGTCTCTCTGTATATCTGC--AAAAAAAAAGAATATCAAAAAAATAATTAGTACAGTACAATCATTTTCCAGGCAAAGGAAGAAAAGGGGAGGTCCAAAATATACAATCTTGGAACCCCATTACTTCAATTATTCACTTCCTTTTTGGTGTACCACTTTTTCATATTTTGCCAGCTTTGCATAACCCCTTTTTCTTCTGTGTTTTGAATACCCTTTTGGTTTTTCTTCTCTGAGGAGGGAGAGTTTTTGCTGCATAGATCTCTCTGTAGAGGAGGAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTTGTCAGAATATTGAGATAGCTGTGGTTAGAAACTTCAGCATTCCAGTTTCCTTTGTTGAAAGAAGTGGTAACAAGGAGGACTTTGCACAATGTCTGGCTCTGTGAAAACTTTGGATCCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312678" ref_strand="+" ref_description="SGN-U312678        Tomato 200607 #1 [28 ESTs aligned] arabidopsis/peptide: | Symbol: None | villin 2 (VLN2), nearly identical to villin 2 (VLN2) (Arabidopsis thaliana) GI:3415115 | chr2:17417793-17424667 REVERSE | Aliases: T11A7.16, T11A7_16(evalue: 0, score=966) genbank/nr: gi|3415115|gb|AAC31606.1| villin 2 [Arabidopsis thaliana] (evalue: 0, score=966)">
      <seq>ccattctcccggtcctctctaaatcatgatgatgtgttcattctggacactaaagacaagatatatcaattcaatggtgcaaactccaatatccaagaaagggccaaagcattggaagttattcagtttttgaaggaaaaatatcatgaggggacgtgtgatgttgcaattgttgatgatggaaatttgcaagctgagtctgattctggatcattctgggttttgtttggtggatttgctccaattagcaaaaaggttattactgaagatgatattgttcccgagaagacacctcctaaacttagcagcatcactgatggtcaagtcagtcctgtagatggtgaactttcaaagtctagcttggaaaacaataaatgctatcttttggattgcggtgctgaggtgtttgtttggattggtcgtgtaactcaactggaggagaggaaagctgccattcaaactgcagaggaatatcttgtctctgaaaatagacccaaggcaacgcgtgtaacccgggttattcaaggttatgaaacccattcattcaagtccaactttgactcttggccatcaggatctgcacctgcccctgaagagggaagaggaaaagtagcagctttgctgaagcagcaaggtgctggcgtcaaaggtgccagcaaaagtgctcctgtaattgaggaagtgcctccgttgcttgaagagggtggaaaattagaggtatggcgcataaatggtaatgcaaagacacctgtcccaaaagaagatattggtaaattctacagtggagattgctatgtggttctctacaactaccattctcatgaaaggagagacgattactatctatgttggtggattggaaaggatagtattgaggaggaccaaatcacggctgctcgattggccagtacaatgtgcaattcactcaaaggaagacctgtgctgggtcgagtgtttcaagggaaagaacctccacagtttgttgcaatcttccagcccatgttggtccttaagggtggtttgagcactggctacaaaaactatattgctgacaaaggcttgaatgatgaaacctatactgctgattcagttgcacttattcggttatctggaacttctgtgcataataacaaagcggttcaagtggatgctgtgccaagttcactgaactctaatgagtgttttcttctgcaatctggctcttcattattcagttggcatggtaaccagagttcttatgagcagcagcaattagcagcaaaggttgcagaattcttgaagccaggagcaacagtgaaacacactaaagaaggaacagagagctctgctttctggtttgcccttggaggaaaacaaagttataccagcaagaaagtggctccagaagtctccagggatccccacttgtttgcttattcatttaataaaggaaaatttgaggttgaagaaatctacaactttgctcaagatgatttattgaccgaggatgtcttactactcgacacacatgctgaagtgtttgtttgggttggtcagtcagcagactccaaagaaaagcagagcgcttttgaaattggacagaaatacgtggagatggctgcatctttggaaggattatcaccaaatgttccactctataaaatcacagaaggaaatgaaccttgcttttttacaacatttttctcatgggatcctgcaaaagccagtgctcatggaaactcattccagaagaaggttatgctactctttggggttggtcatgcttcagagaatcagcaaaggtcaaatggggcaggtgggccaacccaaagggcttcagcgttagctgctttaaactcggctttcagttccccatctcccccaaaatctggttctgcaccgaggcctgctggagcaagtcaggcttcttcacaaagagcagctgcaatagctgcattatctaacgttcttacagctgagaaaaagcagtcgagtgagagtggttctcctgtccaatcaaacagaagctcacctgtacgatcaagcagaagctctcctgttcgatcagtagactctggccctgctgaaagtgatctttctactgctgaggtccaagattccgaaaaagtttcagaacctaaggagattgttgagcctgctgaaactaatgggtcagaaccagagcaggatgagggtggaaatgaaagtggtcaagctatatttagttatgaacagctgaaggctaaatctgacaaccctgtcaccgggattgattttaagcgaagagaggcctatctatcggatgaagaatttatgtctgtacttggtatgaagaaagaagcattctacaagttgcctaaatggaaacaagatatgcacaaaaggaaaactgatctcttctagatcctgcatcggagaaaccaaatggcctgttgctatcttgttgttgcaattctcgacatccgttcccatgtttcttgccagagcaacctacttttataggtacatattgcctggatcgtgtatgtagcattttttttcatttgcttctctcaatgaccatagctcctggtagttttatttttacgattttgtgatgcctgcttgaagtttggtttttttcgattggaaatcagcagtcaggtggttgattctttgatttgatcagtgtatccgagtttgtgttcattgaagtcatgtattttgttaattaaaagggtgtatacattatgttgtaacctatacaaaaaggaatataacatttggggtttgccatcaagagacctttgtggctctgctcttgttttcgttttttaaacggttgtatcccaggccagcttgcatgcagctcgactattccaccgagggcgatgctttggttcctgaattacttataagttcacatattggccatagatatttatatcatatgtatttgaggtttgtttggttgctaaatcaaaaggacattgtatcaagagttaatctcttggtggtttgcaattccattattggagagttttgttgaacaactttgttaatgtttaatgatttacatttataattaagtggtgttgcttgtaacaattttttaaaatttttaattcttttggaatcaaataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="99065" stop="110660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
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          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
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          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="308" r_length="133" r_score="1.000"/>
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            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
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        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102351" g_stop="102510" g_length="160"/>
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        <intron i_serial="3">
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            <donor d_prob="0.984" d_score="1.00"/>
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          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="616" r_length="148" r_score="1.000"/>
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            <donor d_prob="0.999" d_score="1.00"/>
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            <donor d_prob="0.992" d_score="1.00"/>
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            <donor d_prob="0.764" d_score="1.00"/>
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            <donor d_prob="0.746" d_score="1.00"/>
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            <donor d_prob="0.987" d_score="1.00"/>
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            <donor d_prob="0.910" d_score="1.00"/>
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            <donor d_prob="0.999" d_score="1.00"/>
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            <donor d_prob="0.996" d_score="1.00"/>
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            <donor d_prob="0.923" d_score="1.00"/>
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            <donor d_prob="0.994" d_score="1.00"/>
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      </exon-intron_info>
      <PPA_line polyA_start="3099" polyA_stop="3111"/>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U312678" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>3098</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312678" rDNA_strand="+"/>
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        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTCTCCCGGTCCTCTCTAAATCATGATGATGTGTTCATTCTGGACACTAAAGACAAGATATATCAATTCAATGGTGCAAACTCCAATATCCAAGAAAGGGCCAAAGCATTGGAAGTTATTCAGTTTTTGAAGGAAAAATATCATGAGGGGACGTGTGATGTTGCAATTGTTGGTACGTTGCCATGGAAAATTATAAGAGAAGTGGATCAAGTTGAATATATTTCTGCACTTTCTTTATCTTAATTTAACTTGCGTTGTTTGAATCTGATTGGTAAAAAGGTTATTCTGGTATATCTTGCAACTAATACTTAAGCATTTGGTAGCATTTCAATTTTCAAGTGTACTTTCATATGAAAAGTAACTGCCTAATATCATTCTTAACTTCTGTTAATTTGACCATCAAAATCAAAGTAGGAAGCTGATATCGGGATGGATGGAGCAAGTACTATTTTTATACAATATTTGAAACTTTTCACAAATGTATTCCGAGATACTATGCTTATAAAAATAATGTGTTCCTAGATATTATGTTTAAAACCTTTGGTGGAAAGTTTTCAAATAGTGTTCTCTATGGAATGCTTCTATGCTTTTAAGCATATTATGTGTGCCACAATTGATTTGATTCATGAGAACAATGAATAAAATATTTCAAAATGTGCAAAAGATGTGATTAATAAATTTGGGTGAATTTTGTTTTACATGAATGCTTCTTGTGTGAAAGAACAATTTTTTATATCTTTGCTAATAGATATTGTGGGAGAGAATCATTCGATTCAACTAAAAGGCGGAACTAAACTGCTTACACCCATGAAAAAGATCTGATCAACCAAGATAGGGAACAAACGTTAAAACTTAGAAAGCTATAGGGGGAATAATCTATCATTATGATGTCAACACCATGCAGATTGGGTTGGATAGAGTCAATATGTTCGTTTATCCATCATGTGTGGCGCCTAACATATCACTCTTTTGTTACTCCCTAAATTTTTACGAAATAACTCTGGGCTTGACTACTCCTTCTTACTTCTCTTATGTATATCTCAGATGATGGAAATTTGCAAGCTGAGTCTGATTCTGGATCATTCTGGGTTTTGTTTGGTGGATTTGCTCCAATTAGCAAAAAGGTTATTACTGAAGATGATATTGTTCCCGAGAAGACACCTCCTAAACTTAGCAGGTATTGTTGCCTCCTTTTATCTTATGTTTGTTATTAGGTTGGTGACTCAATTGTAACTTGTTAGTAATTCATATTGGCAACTTTGAGTCCCCTTTTTTGGGGGGATAGTCAAAGGACATTTTTTAGTTCTGCACGCTACATGTGTGGCTTAGTGATCAATGATGTGGGTTGAGACCCATGAGGTCTCAAGTTCAAATCCCAGTGGAAACAAAAATACTAGGTGATTTATTCCAATGTATCCAACCCTTAGTTGACAATGTTATGTGATACTCGTGGTGGTAGGAGGTAGCTGTACCCTATGAAGTTAATCAGTTGAGGCGTAGGAAAGCAGAACTTTGAGTTCCTTGAGTGATCCATAGTTTATCTAGGAGCAAACTATTTATGATTTATCTTGTTAGATTTAGCCAGTGTTGTGAATGGCGAGCGCCTCATCGCCAAAGGCGACATACAAAAGCGACCCATGGCGATCTAATGGCGACAAAAATGGCCCGCCTTTTTTATTTAATTTTTCTTTAAAGATTTGACTTAACGATATTAGTCAAAATTAGGTTTTTTTTTTCTATTTTCCAAATTTGCTGCTGCGCGACTCCTTTTTAGTATCTACTATTGGTTTTTGAATTGAATATTTGCTAATATGTGTTATTACTATTAAGATTTTGGATAAAATATGCAATTAAATATTTTTAATTTTTGGTATTCATTGGCGCCTTGATTCAAAAAGGCAAGCGCCTCGCCGCGTGGCGAGGCAGGCCCTTGTCGCCTTTCGCCATCCAAAACACTGGATTTAGCATGTTCTGGATTGTTGTCTCTTACTGATATTATAAATGTTCTTATTTGAGGGAAATGGTTTTAGATTTTCAATGATGCTAAGAGGTAAAGATTAGTCATACTATAGAAGTAGTATACACCTAGCCTGGATCCTCGGGGCTGATTACAAACCGGACGAAGTGAAAGAACTATGAGATGAGATCATTTGCGTTCAAATTCAATTGGTTCTTGCATATTTGAAGTGATCGAAGCTAGCTGGTTACTGGTCGAGTTTGGGATAATAGTTATCAAAAGAAGAATCACTAGAACCACATTTCCTTGATCTTGGTATATGTTGTTAGACACAAAGAAGAAAAGAAAGAAGATAAAATTTGAGAGATGTGCCTTGTGTTCAGGCCCTGAAGACCGGGGATGACATTGGAGGAATTACTTTTCTGATTTGCATCCCTTATCAACTCATGGGCATGTGAAAACTGAATAACTTTCATTGATGAAGTTTGACAAGTTTATGGTTGATGTATTCTTGCACGGTGCTGGTTGCAATCATTGCTGGACATCTCCTAGAGAATATCCCTGTTGGAAGATTTGAAGAGGTTGTTTTGTTGGGATATTGTGTGGGGGGTGGGAGGGATGTAATGGTAGAATGTCCGAGAGGAGCTTGAATGTTTTGGACTTGGGATCAGTGAATACATAAATATTGGCCGGAAAAATAAGCAAGGAAATGAAGATGCATGATGGGATATTTGGAATTTTGTTTTGTCGGGTGCATGTCGTGTATTATCAGCTCATGTTCTATCTATGGTTTATGATGATGCATATCAAAATTATTTAACATCCTTGATTGACCTTGAACTGCTGAACATGACTTCTTCATGGTAGAAGATCTTTACACTGAATCGCTCTAATTAATTCTCTCGTGTTTTCCATTTCTATGTCTATTGCAATGCCCTTATGCTTGCTACTTTCTCATCACTGAATTTTTTATATCAACCTTATGCTGGTGTTGCTGCTGAAGCTGATTGCTTCCTCATTTTGCAGCATCACTGATGGTCAAGTCAGTCCTGTAGATGGTGAACTTTCAAAGTCTAGCTTGGAAAACAATAAATGCTATCTTTTGGATTGCGGTGCTGAGGTGTTTGTTTGGATTGGTCGTGTAACTCAACTGGAGGAGAGGAAAGCTGCCATTCAAACTGCAGAGGTAGAATTGTTTAGTCCACATGTTAGTTATTTGATACGACTTTTAGTTGCTAAATGGCTTGTGATATCCCCAGGAATATCTTGTCTCTGAAAATAGACCCAAGGCAACGCGTGTAACCCGGGTTATTCAAGGTTATGAAACCCATTCATTCAAGTCCAACTTTGACTCTTGGCCATCAGGATCTGCACCTGCCCCTGAAGAGGGAAGAGGAAAAGTAGCAGGTAAATTTTTTCTCTACTTGTGAAGTGTAATGTTGTTTGGTGCCAGTAGTTCTAAGTTCTCGCATCTTTACAGCTTTGCTGAAGCAGCAAGGTGCTGGCGTCAAAGGTGCCAGCAAAAGTGCTCCTGTAATTGAGGAAGTGCCTCCGTTGCTTGAAGAGGGTGGAAAATTAGAGGTCTGATCAGCACTGTTATTTCCATTTCTTCACCAATGTGTGTTGATATAACCAGCTTGTTTTACTAAAAATATGAGATTTATTAGGTATGGCGCATAAATGGTAATGCAAAGACACCTGTCCCAAAAGAAGATATTGGTAAATTCTACAGTGGAGATTGCTATGTGGTTCTCTACAACTACCATTCTCATGAAAGGAGAGACGATTACTATCTATGTTGGTGGATTGGAAAGGATAGTATTGAGGTAATGTGGATTGTCACTGCAATTCAAGGGTCCATGCATTTCTTCCCATAAATTTTATTTGATAATTAAGTTGATATGCCATGCATCTGAGAATTATAGTTATCATTTGTTTTAACTTGCTTGTGAGCTAGCCCTTCATGGACCTGGTGAAAAAAGGAAATGAAACCAAAAAATGTAATGCAAAGGAAACGAAACAAAAAAATATAATGGTACATCTAAGAACTTCAATTGTGTAAATGATTCTCATATGTTTGTACTTGTGAACTGTTCTTTAATTTGATTAGCGTGGAGATAGTTATAAAAGAAAGTCTTACCTAAAAAAGGATTTATTACACTAGAGTGAGGTAGATGTGATTTTAATAATAGATAAAGTGCTTTAAAGTGAGGTTTGTAGTAAGAATGCACTTCTAGGAATAAGTAATTTACTGGAATAATACTATTTGTTTTAGTTTGTAATGGTAGGAGATTCTGATCTTCTCCACCAGGGGAAGGGGTCAAAGTGAAATTGAAAGAACTAAAAAAACCAGCCATGGCTTTCATCTAGTACCCCCCTTTCTTAGTTTGTGTACCATCTTTCTGCTTTCTTGGAGATAGGTAGTGAGTCTAAAGGACTTATCCAGTTTCCATATGTGATAAAGTTGTGTCTTGATACAGGAGGACCAAATCACGGCTGCTCGATTGGCCAGTACAATGTGCAATTCACTCAAAGGAAGACCTGTGCTGGTATTACTTGTCACATATTGGTTGTCTCTCTCTAAAGTTGGCAAGGTTTTAATTCGACACTAAACATTGTCCAGGGTCGAGTGTTTCAAGGGAAAGAACCTCCACAGTTTGTTGCAATCTTCCAGCCCATGTTGGTCCTTAAGGTACGTCGTCATACAGCATAATACAGGCTGCTGTTGCTGCAGTACTTGATTTACATCATCAATAGCCCTGATGAATTTTGATTTTCCTCAGGGTGGTTTGAGCACTGGCTACAAAAACTATATTGCTGACAAAGGCTTGAATGATGAAACCTATACTGCTGATTCAGTTGCACTTATTCGGTTATCTGGAACTTCTGTGCATAATAACAAAGCGGTTCAAGTGGATGCTGTAAGCTTATGACCTTCAACTTTTTCTTCTTGTTTTGGTCTATAAGGTTGCAGATTATCTTAATTGTTTTAGTATTTGAAGCAGATAATATCCTTTCTTCCTACAGTACCTGTTCTCCTATAATTATCTTGTTGATGTTACTTCATATGATATGCCAACCTGTTTTTAGATAGATGAGTAGCTACTCCCCAGGTTGATAACTTGATATAATCTTTCTTCGAGTCTTCACATCTCTTTTTCACATCTGGTATTAGTCCTCAGTATCCACCCCGTTGTTCTTGAGCTTATTTTGCTTCAATACTAAATAATGCCTTCAAGGGCAAATTACGGATTTTCTGCAACTAGTGGTTCTCTTGATGTACAAGTGTTTTTTATAATCCGTAAAAGGAACCAGTAATGCCAGAATGATTCTTACATGGACATTTATGTTCTCAAACCAGAACAAAGAACTCTTTACGAACATCAGACTGAATATCAGTGTAGTACAGCTACAAAGCCTTAGTCCCAATCGTTGACGTCTACTATGTAAATCTTTTGTATTTTTTGCAGTTATGATATCATTGAATTATACTTGATTGTGTTGGTAATGATGAGAGCCCATTAATTCTAATTCAGACAACTTGTCTGGCTTTGTCGATGACTGTATTCTGTGATTAGTGAAAGTTGCAGTTCTCTTAGTATACAAATTACTGTGAACTTATAAAAATAAAATTTTCTACGGGGATTGCTTATTTTTATTTTTTTCTGTGTCGGAACTGTCAGGTGCCAAGTTCACTGAACTCTAATGAGTGTTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAGGTGAGATGTTTATTGAAACTGGAAAGACTTCTCACCTTTTTCCCATCATTCTCTTTATGACTAGGAAGGGTTCAATCTTTTAAGTACTCCGGGAGAAATTGCTTATGGTTTTGCTTTGAAATATTCAAAGACTTGAGGTGAATTTAAGTTTCTTTTCTCATAGGCAGATCCCCACTGAGTTAATGTGAGTTCCGCTAGATATAGAATAAATTACCATGAAATGAAGTGTATAGTTGTCTACAGTATATGTGAGTTTTGTATGGTGAAAGTTGCTTGAAGTTGTTATCTGGCAATCCTCATCATTTGAGTGCTAGCATGGAGGGTAATAATCTACTCCAGTTGGACAAAATGTCACGTTTTATCCTGCTTAAAATTTTGGTAATTTTTTTTTTGGCAAATGTCTCGAGCAGATTCCACTCAGTTCATAAGAGTTCACCTTGTGTGACTGGTTGTGCTTGTATGATGGTATCATTATGTCTGTGCTTGATGAAGGATGCATCTATTTTCATTAGTCATTAATAAATGTCTCCATATGCATGAAACATTTCTTTTACTTTGATGCTGTAGAACGATTTTAAATGCACTTTGTAAGAAAGCGAAACCATCTTAAAATGCACTAATTGAGAGATGATGCAGTGAAATTTCATAAACTTACCTTGATCAAATTACAGTCGTCAGGTTGTTATACAGTAACATCGTGACTGAATAACTATTTGAAATATGAAAAATGCAAGCATAGCCTGCATCTGTTAAGATGTATATCCACGGTGGTGAAATTTTAGCAAAATATACAGCATTATAGCTAGAAATGATTGCATGGACACCTCTTCATCTTCATTGGTTTTGACTAGTGTTTCAGCTTTTCTTTTTTACCTGGAATGAATAATGAAATAATCAAGAAAGTGGCTACCAACCTCAAATTTCATATGATTGTTCTTGCCGCTGACTTTTCGTTGCAATCACAAAAGGCTGAAGTTTCATTACTTAGTTTCGTGGATATTAAGCGTATACTTTTATGATTTCTAGCTTGTAGCAGATAGCATAGCTTTGATTTGTGTGTTGTACCGGTTGTGTAGTTTTAAGTATCCACATGCATATTGACATCCACTCTGAAATTGTGAAGAAGATATCCCCAATCGATATGCCTCATGTTTGTGTATGTCCTGCACTGGACTAATGTACTTAATTTTTTGTGCAACTTCAGCCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAGGTATGCCTATTATTCTATAATTCTTTTGATTTTTTATTAGCTTTCATCTGCTAACGATCTTTTTAATGATTTGCATGTTATCAACATTGATATCCAGGAAAATTTGAGGTAATGTTCTACAGTACAAGTGTAAAATTTCTCACTTTCTGCTCCATCCTTTTACTGTGTTTTTAAAATTTGTTCTCTACTCATTTGATAGGTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAGGTAATTCACAAGGCTATCATAGGCATTTACAATTATGCAAGCATGTTTTTAATTAACATTTTAATCCACTAATATGATTACAGAAATACGTGGAGATGGCTGCATCTTTGGAAGGATTATCACCAAATGTTCCACTCTATAAAATCACAGAAGGAAATGAACCTTGCTTTTTTACAACATTTTTCTCATGGGATCCTGCAAAAGCCAGTGTAAGTGACTAAACCTTTAGTCTGATTGTCATTATGAGTCCTCCTGGCATGAACTCGTAGACACTATGTTGATGCCATAGAAGAGTTCCATTAGTCATCCTTTATTTAAACATTTCTTTTATGATTTCGGAGAGGATGGGGAGATGAGGTGCAATTTTTACATGGAACTGATAAGTTGTACAGTATTGTATTTGCATGCTGAACTCAATTACCATTTCAGCTTTGATGACTAGACCCTGCAGTATTTGTATATGTGTTTTTGAACAACTGATAACGATAGACTGATGACATATTTGGATACCTGTTTCTGATCCTTAAACCAAAATCATGCAGTTATTATAAATCATCTTGTACAAGATACTGAATGATCTCTCTTAGAGAAGATCTCACACAATAGCTTTGAAGTAGGGACTAAACAAGCATATTGAAGCTTCTTCTTTCTCACTGTTGAAGGCAAAGTTACTTTCCATGAGGGTGAAACTTTTAAATAGTCATTTTAACTACAATATATTTGTGGTTGTAACTTATTGGTTCATCAATTATCTCACCTCTAATAGTTCTATAATCTGTATATTGCACTAACCTTCCTATTTAACCAGGCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAGGTAATTTCTTGACTTCATTTAAGCAATGATGGGTTTATGCCCAATTTTTTTCGTATTTGCAAATGTTTTCTCATTTCCATTTCTGTCATTGTAAGACTACTGAAATCTGTGAATCATGTAATTTATGATTCCTTTCAGAGACCAATGTATAGCATATGTGACTACTTTTTCCTGTCTAAGCTGGCCATTGTAGAATGAAGAAAATCTTTTTGGTTGTGCAAGTGTCATATCTCTGTGTGGGTTTTCTTTAGAATCATAATATAGAGCCCCCTCCCTCTCCCCTTTGGGGTGGTTAAATAGAAAAACTAAAAGAAAGTGATATTAGAAAATAAAGACCGTGGAATAGGAGAACGACAATTGCCAAAAAATGCAATGGATATTTGGGTACCAAAATGTTACAGATTATGAGTGTGTACATAAGTAAAATATTCTGTGTAGATATCATGGTTATTAAGCAGTAGTTGTTAACGGTTGATTCTGTCATTATCAATCAAATGTGGAATGCGATAAATCTCAGATGTTCAAAAAATCCCAATGTGCTAACAGCCTGCTCTATATTTCAGAATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAAGCTCACCTGTACGATCAAGCAGAAGCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTGGTATTAAAATCTGTTTTGCTCTTCCTTTTGCTATTATACCGACTTCAAAATCTCTTTTTTCTCTTAATCTTGTGCTTTTAATTCATAATTTTAAGTGCTTGTGCATGCATTTACATAAATTATTGTGCTTATGCTATCAGTTGATGTTATTGAGGGAAGTATTGACTGCATGAAAAGTGAAAGTTGACTGTTTCTATGGAAAATCAAATCATTCTACTTAAAATTACCTTTAAGTTCAGCTCTTTAAGTGGTTTGACATACCTGAATGTTTACTTTTCCACCAAAGCAGAAAGTGATCTTTCTACTGCTGAGGTCCAAGATTCCGAAAAAGTTTCAGAACCTAAGGAGATTGTTGAGCCTGCTGAAACTAATGGGTCAGAACCAGAGCAGGATGAGGGTGGAAATGAAAGTGGTCAAGCTATATTTAGTTATGAACAGCTGAAGGCTAAATCTGACAACCCTGTCACCGGGATTGATTTTAAGCGAAGAGAGGTTTGTAGCTCAACCATTCTTTGGCATTCCTCATATGATGTAATTACTCCTATACATATCATATAACAAATAGTTCTCACAAGTCCATAAAATCAGTCGAATCTGAAGCCAATATCTCTTTGCACTAATACAATAAATACTCGAATACTTTTTAAGGCATAATACATAATCAAACATTCGACTTGGTCTCAACTGACAATTAAACACTTCAACTTGTCCCCACTGTTTCTCGTGGACTCCTGACGTTAACGTGACACATAAATTTTGGAGGTGTCTAGATAAGCATTTTGTGAGTTGGTGTTCAACTGGCTCTGTGGAGACAAGTTGAGGTGTTTAGAGGTGCATACTTAAAATTGGAGTGTTTTCTCGTCAGCTGAGGTCAAGTTCAAGTTTGAGTGTATGTTTTATGTATAATGCCTACTTTTAAGTCCTACAACATCGCTGAGCTCCATCTTTCTTTTCTGATATTCTCTTCCAGGCCTATCTATCGGATGAAGAATTTATGTCTGTACTTGGTATGAAGAAAGAAGCATTCTACAAGTTGCCTAAATGGAAACAAGATATGCACAAAAGGAAAACTGATCTCTTCTAGATCCTGCATCGGAGAAACCAAATGGCCTGTTGCTATCTTGTTGTTGCAATTCTCGACATCCGTTCCCATGTTTCTTGCCAGAGCAACCTACTTTTATAGGTACATATTGCCTGGATCGTGTATGTAGCATTTTTTTTCATTTGCTTCTCTCAATGACCATAGCTCCTGGTAGTTTTATTTTTACGATTTTGTGATGCCTGCTTGAAGTTTGGTTTTTTTCGATTGGAAATCAGCAGTCAGGTGGTTGATTCTTTGATTTGATCAGTGTATCCGAGTTTGTGTTCATTGAAGTCATGTATTTTGTTAATTAAAAGGGTGTATACATTATGTTGTAACCTATACAAAAAGGAATATAACATTTGGGGTTTGCCATCAAGAGACCTTTGTGGCTCTGCTCTTGTTTTCGTTTTTTAAACGGTTGTATCCCAGGCCAGCTTGCATGCAGCTCGACTATTCCACCGAGGGCGATGCTTTGGTTCCTGAATTACTTATAAGTTCACATATTGGCCATAGATATTTATATCATATGTATTTGAGGTTTGTTTGGTTGCTAAATCAAAAGGACATTGTATCAAGAGTTAATCTCTTGGTGGTTTGCAATTCCATTATTGGAGAGTTTTGTTGAACAACTTTGTTAATGTTTAATGATTTACATTTATAATTAAGTGGTGTTGCTTGTAACAATTTTTTAAAATTTTTAATTCTTTTGGGATCAA</genome_strand>
        <mrna_strand>CCATTCTCCCGGTCCTCTCTAAATCATGATGATGTGTTCATTCTGGACACTAAAGACAAGATATATCAATTCAATGGTGCAAACTCCAATATCCAAGAAAGGGCCAAAGCATTGGAAGTTATTCAGTTTTTGAAGGAAAAATATCATGAGGGGACGTGTGATGTTGCAATTGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGGAAATTTGCAAGCTGAGTCTGATTCTGGATCATTCTGGGTTTTGTTTGGTGGATTTGCTCCAATTAGCAAAAAGGTTATTACTGAAGATGATATTGTTCCCGAGAAGACACCTCCTAAACTTAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACTGATGGTCAAGTCAGTCCTGTAGATGGTGAACTTTCAAAGTCTAGCTTGGAAAACAATAAATGCTATCTTTTGGATTGCGGTGCTGAGGTGTTTGTTTGGATTGGTCGTGTAACTCAACTGGAGGAGAGGAAAGCTGCCATTCAAACTGCAGAG.........................................................................GAATATCTTGTCTCTGAAAATAGACCCAAGGCAACGCGTGTAACCCGGGTTATTCAAGGTTATGAAACCCATTCATTCAAGTCCAACTTTGACTCTTGGCCATCAGGATCTGCACCTGCCCCTGAAGAGGGAAGAGGAAAAGTAGCAG.........................................................................CTTTGCTGAAGCAGCAAGGTGCTGGCGTCAAAGGTGCCAGCAAAAGTGCTCCTGTAATTGAGGAAGTGCCTCCGTTGCTTGAAGAGGGTGGAAAATTAGAG......................................................................................GTATGGCGCATAAATGGTAATGCAAAGACACCTGTCCCAAAAGAAGATATTGGTAAATTCTACAGTGGAGATTGCTATGTGGTTCTCTACAACTACCATTCTCATGAAAGGAGAGACGATTACTATCTATGTTGGTGGATTGGAAAGGATAGTATTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACCAAATCACGGCTGCTCGATTGGCCAGTACAATGTGCAATTCACTCAAAGGAAGACCTGTGCTG..........................................................................GGTCGAGTGTTTCAAGGGAAAGAACCTCCACAGTTTGTTGCAATCTTCCAGCCCATGTTGGTCCTTAAG...........................................................................................GGTGGTTTGAGCACTGGCTACAAAAACTATATTGCTGACAAAGGCTTGAATGATGAAACCTATACTGCTGATTCAGTTGCACTTATTCGGTTATCTGGAACTTCTGTGCATAATAACAAAGCGGTTCAAGTGGATGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCAAGTTCACTGAACTCTAATGAGTGTTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAG.................................................................................................GAAAATTTGAG...........................................................................................GTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAG...................................................................................AAATACGTGGAGATGGCTGCATCTTTGGAAGGATTATCACCAAATGTTCCACTCTATAAAATCACAGAAGGAAATGAACCTTGCTTTTTTACAACATTTTTCTCATGGGATCCTGCAAAAGCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAAGCTCACCTGTACGATCAAGCAGAAGCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTG.................................................................................................................................................................................................................................................................................................AAAGTGATCTTTCTACTGCTGAGGTCCAAGATTCCGAAAAAGTTTCAGAACCTAAGGAGATTGTTGAGCCTGCTGAAACTAATGGGTCAGAACCAGAGCAGGATGAGGGTGGAAATGAAAGTGGTCAAGCTATATTTAGTTATGAACAGCTGAAGGCTAAATCTGACAACCCTGTCACCGGGATTGATTTTAAGCGAAGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTATCTATCGGATGAAGAATTTATGTCTGTACTTGGTATGAAGAAAGAAGCATTCTACAAGTTGCCTAAATGGAAACAAGATATGCACAAAAGGAAAACTGATCTCTTCTAGATCCTGCATCGGAGAAACCAAATGGCCTGTTGCTATCTTGTTGTTGCAATTCTCGACATCCGTTCCCATGTTTCTTGCCAGAGCAACCTACTTTTATAGGTACATATTGCCTGGATCGTGTATGTAGCATTTTTTTTCATTTGCTTCTCTCAATGACCATAGCTCCTGGTAGTTTTATTTTTACGATTTTGTGATGCCTGCTTGAAGTTTGGTTTTTTTCGATTGGAAATCAGCAGTCAGGTGGTTGATTCTTTGATTTGATCAGTGTATCCGAGTTTGTGTTCATTGAAGTCATGTATTTTGTTAATTAAAAGGGTGTATACATTATGTTGTAACCTATACAAAAAGGAATATAACATTTGGGGTTTGCCATCAAGAGACCTTTGTGGCTCTGCTCTTGTTTTCGTTTTTTAAACGGTTGTATCCCAGGCCAGCTTGCATGCAGCTCGACTATTCCACCGAGGGCGATGCTTTGGTTCCTGAATTACTTATAAGTTCACATATTGGCCATAGATATTTATATCATATGTATTTGAGGTTTGTTTGGTTGCTAAATCAAAAGGACATTGTATCAAGAGTTAATCTCTTGGTGGTTTGCAATTCCATTATTGGAGAGTTTTGTTGAACAACTTTGTTAATGTTTAATGATTTACATTTATAATTAAGTGGTGTTGCTTGTAACAATTTTTTAAAATTTTTAATTCTTTTGGAATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333826" ref_strand="+" ref_description="SGN-U333826        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | villin 3 (VLN3), nearly identical to villin 3 (VLN3) (Arabidopsis thaliana) GI:3415117 | chr3:21254113-21262077 REVERSE | Aliases: F28O9.1(evalue: 9e-60, score=227) genbank/nr: gi|57283139|emb|CAE17317.1| villin 2 [Nicotiana tabacum] (evalue: 4e-104, score=381)">
      <seq>cgttagtggtttcttctgcaatctggctcttcattattcagttggcatggtaaccagagttcttatgagcagcagcaattagcagcaaaggttgcagaattcttgaagccaggagcaacagtgaaacacactaaagaaggaacagagagctctgctttctggtttgcccttggaggaaaacaaagttataccagcaagaaagtggctccagaagtctccagggatccccacttgtttgcttattcatttaataaaggaaaatttgaggttgaagaaatctacaactttgctcaagatgatttattgaccgaggatgtcttactactcgacacacatgctgaagtgtttgtttgggttggtcagtcagcagactccaaagaaaagcagagcgcttttgaaattggacagaaatacgtggagatggctgcaaaagccagtgctcatggaaactcattccagaagaaggttatgctactctttggggttggtcatgcttcagagaatcagcaaaggtcaaatggggcaggtgggccaacccaaagggcttcagcgttagctgctttaaactcggctttcagttccccatctcccccaaaatctggttctgcaccgaggcctgctggagcaagtcaggcttcttcacaaagagcagctgcaatagctgcattatctaacgttcttacagctgagaaaaagcagtcgagtgagagtggttctcctgtccaatcaaacagaacctcacctgtacgatcaagcagaacctctcctgttcgatcagtagactctggccctgctgaaagtgatctttctactgctgaggcccaagattccgaaaaagtttcagaacctaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="104731" stop="109202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105029" g_stop="105136" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105137" i_stop="106340" i_length="1204">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106341" g_stop="106488" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="256" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106489" i_stop="106585" i_length="97">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.401" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106586" g_stop="106596" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="267" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106597" i_stop="106687" i_length="91">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106688" g_stop="106828" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="408" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106829" i_stop="106911" i_length="83">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106912" g_stop="106929" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="426" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106930" i_stop="107025" i_length="96">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="107026" g_stop="107037" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="438" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="107038" i_stop="107636" i_length="599">
            <donor d_prob="0.923" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="107637" g_stop="107699" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="501" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="107700" i_stop="108262" i_length="563">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="108263" g_stop="108557" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="796" r_length="295" r_score="0.993"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="108558" i_stop="108846" i_length="289">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.125" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="108847" g_stop="108902" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="852" r_length="56" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U333826" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105029" e_stop="105136"/>
          <exon e_start="106341" e_stop="106488"/>
          <exon e_start="106586" e_stop="106596"/>
          <exon e_start="106688" e_stop="106828"/>
          <exon e_start="106912" e_stop="106929"/>
          <exon e_start="107026" e_stop="107037"/>
          <exon e_start="107637" e_stop="107699"/>
          <exon e_start="108263" e_stop="108557"/>
          <exon e_start="108847" e_stop="108902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAGTGTTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAGGTGAGATGTTTATTGAAACTGGAAAGACTTCTCACCTTTTTCCCATCATTCTCTTTATGACTAGGAAGGGTTCAATCTTTTAAGTACTCCGGGAGAAATTGCTTATGGTTTTGCTTTGAAATATTCAAAGACTTGAGGTGAATTTAAGTTTCTTTTCTCATAGGCAGATCCCCACTGAGTTAATGTGAGTTCCGCTAGATATAGAATAAATTACCATGAAATGAAGTGTATAGTTGTCTACAGTATATGTGAGTTTTGTATGGTGAAAGTTGCTTGAAGTTGTTATCTGGCAATCCTCATCATTTGAGTGCTAGCATGGAGGGTAATAATCTACTCCAGTTGGACAAAATGTCACGTTTTATCCTGCTTAAAATTTTGGTAATTTTTTTTTTGGCAAATGTCTCGAGCAGATTCCACTCAGTTCATAAGAGTTCACCTTGTGTGACTGGTTGTGCTTGTATGATGGTATCATTATGTCTGTGCTTGATGAAGGATGCATCTATTTTCATTAGTCATTAATAAATGTCTCCATATGCATGAAACATTTCTTTTACTTTGATGCTGTAGAACGATTTTAAATGCACTTTGTAAGAAAGCGAAACCATCTTAAAATGCACTAATTGAGAGATGATGCAGTGAAATTTCATAAACTTACCTTGATCAAATTACAGTCGTCAGGTTGTTATACAGTAACATCGTGACTGAATAACTATTTGAAATATGAAAAATGCAAGCATAGCCTGCATCTGTTAAGATGTATATCCACGGTGGTGAAATTTTAGCAAAATATACAGCATTATAGCTAGAAATGATTGCATGGACACCTCTTCATCTTCATTGGTTTTGACTAGTGTTTCAGCTTTTCTTTTTTACCTGGAATGAATAATGAAATAATCAAGAAAGTGGCTACCAACCTCAAATTTCATATGATTGTTCTTGCCGCTGACTTTTCGTTGCAATCACAAAAGGCTGAAGTTTCATTACTTAGTTTCGTGGATATTAAGCGTATACTTTTATGATTTCTAGCTTGTAGCAGATAGCATAGCTTTGATTTGTGTGTTGTACCGGTTGTGTAGTTTTAAGTATCCACATGCATATTGACATCCACTCTGAAATTGTGAAGAAGATATCCCCAATCGATATGCCTCATGTTTGTGTATGTCCTGCACTGGACTAATGTACTTAATTTTTTGTGCAACTTCAGCCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAGGTATGCCTATTATTCTATAATTCTTTTGATTTTTTATTAGCTTTCATCTGCTAACGATCTTTTTAATGATTTGCATGTTATCAACATTGATATCCAGGAAAATTTGAGGTAATGTTCTACAGTACAAGTGTAAAATTTCTCACTTTCTGCTCCATCCTTTTACTGTGTTTTTAAAATTTGTTCTCTACTCATTTGATAGGTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAGGTAATTCACAAGGCTATCATAGGCATTTACAATTATGCAAGCATGTTTTTAATTAACATTTTAATCCACTAATATGATTACAGAAATACGTGGAGATGGCTGCATCTTTGGAAGGATTATCACCAAATGTTCCACTCTATAAAATCACAGAAGGAAATGAACCTTGCTTTTTTACAACATTTTTCTCATGGGATCCTGCAAAAGCCAGTGTAAGTGACTAAACCTTTAGTCTGATTGTCATTATGAGTCCTCCTGGCATGAACTCGTAGACACTATGTTGATGCCATAGAAGAGTTCCATTAGTCATCCTTTATTTAAACATTTCTTTTATGATTTCGGAGAGGATGGGGAGATGAGGTGCAATTTTTACATGGAACTGATAAGTTGTACAGTATTGTATTTGCATGCTGAACTCAATTACCATTTCAGCTTTGATGACTAGACCCTGCAGTATTTGTATATGTGTTTTTGAACAACTGATAACGATAGACTGATGACATATTTGGATACCTGTTTCTGATCCTTAAACCAAAATCATGCAGTTATTATAAATCATCTTGTACAAGATACTGAATGATCTCTCTTAGAGAAGATCTCACACAATAGCTTTGAAGTAGGGACTAAACAAGCATATTGAAGCTTCTTCTTTCTCACTGTTGAAGGCAAAGTTACTTTCCATGAGGGTGAAACTTTTAAATAGTCATTTTAACTACAATATATTTGTGGTTGTAACTTATTGGTTCATCAATTATCTCACCTCTAATAGTTCTATAATCTGTATATTGCACTAACCTTCCTATTTAACCAGGCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAGGTAATTTCTTGACTTCATTTAAGCAATGATGGGTTTATGCCCAATTTTTTTCGTATTTGCAAATGTTTTCTCATTTCCATTTCTGTCATTGTAAGACTACTGAAATCTGTGAATCATGTAATTTATGATTCCTTTCAGAGACCAATGTATAGCATATGTGACTACTTTTTCCTGTCTAAGCTGGCCATTGTAGAATGAAGAAAATCTTTTTGGTTGTGCAAGTGTCATATCTCTGTGTGGGTTTTCTTTAGAATCATAATATAGAGCCCCCTCCCTCTCCCCTTTGGGGTGGTTAAATAGAAAAACTAAAAGAAAGTGATATTAGAAAATAAAGACCGTGGAATAGGAGAACGACAATTGCCAAAAAATGCAATGGATATTTGGGTACCAAAATGTTACAGATTATGAGTGTGTACATAAGTAAAATATTCTGTGTAGATATCATGGTTATTAAGCAGTAGTTGTTAACGGTTGATTCTGTCATTATCAATCAAATGTGGAATGCGATAAATCTCAGATGTTCAAAAAATCCCAATGTGCTAACAGCCTGCTCTATATTTCAGAATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAAGCTCACCTGTACGATCAAGCAGAAGCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTGGTATTAAAATCTGTTTTGCTCTTCCTTTTGCTATTATACCGACTTCAAAATCTCTTTTTTCTCTTAATCTTGTGCTTTTAATTCATAATTTTAAGTGCTTGTGCATGCATTTACATAAATTATTGTGCTTATGCTATCAGTTGATGTTATTGAGGGAAGTATTGACTGCATGAAAAGTGAAAGTTGACTGTTTCTATGGAAAATCAAATCATTCTACTTAAAATTACCTTTAAGTTCAGCTCTTTAAGTGGTTTGACATACCTGAATGTTTACTTTTCCACCAAAGCAGAAAGTGATCTTTCTACTGCTGAGGTCCAAGATTCCGAAAAAGTTTCAGAACCTAAG</genome_strand>
        <mrna_strand>CGTTAGTGGTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAG.................................................................................................GAAAATTTGAG...........................................................................................GTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAG...................................................................................AAATACGTGGAGATGGCT................................................................................................GCAAAAGCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAACCTCACCTGTACGATCAAGCAGAACCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTG.................................................................................................................................................................................................................................................................................................AAAGTGATCTTTCTACTGCTGAGGCCCAAGATTCCGAAAAAGTTTCAGAACCTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335078" ref_strand="+" ref_description="SGN-U335078        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 1e-06, score=56.6)">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="112430" stop="113697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112730" g_stop="112834" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112835" i_stop="112986" i_length="152">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112987" g_stop="113397" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="515" r_length="410" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335078" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112730" e_stop="112834"/>
          <exon e_start="112987" e_stop="113397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGCATATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGCTGATTTTATGATATTGCTTAATGCATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGA........................................................................................................................................................ATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGG-GTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315286" ref_strand="+" ref_description="SGN-U315286        Tomato 200607 #1 [5 ESTs aligned]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttcgagtcaattggtatctaagcgatacgaattggtatctgaccatnctcactctcttgccagatgggtagaactagagcaacgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="112953" stop="114448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113253" g_stop="114148" g_length="896"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="888" r_length="888" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U315286" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>896</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113253" e_stop="114148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGCTGATTTTATGATATTGCTTAATGCATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAACAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAACTGGTTTTTTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTT-GAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTCCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGAC</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATAATAGTAGTTATTG-A--------TTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTCGAGT-CAATTGGTATCTAAGCGATACGAATTGGTATCTGACCATNCTCACTCTCTTGC-CAGATGGGTAGAACTAGAGCAACGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="113622" stop="114507"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113922" g_stop="114207" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113922" e_stop="114207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTCCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335932" ref_strand="+" ref_description="SGN-U335932        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|2190718|gb|AAB64397.1| beta-galactosidase [unidentified cloning vector](evalue: 3e-14, score=80.1)">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="114946" stop="113914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114646" g_stop="114214" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335932" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114646" e_stop="114214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGTCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTAGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACCTCCTCAGTCGGTAGAGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGTTTGTCCTCTTCCCCTAGAGGACGTCCTCCCACGACCTCTACCATGGCCCCTTGCCGCTGTTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="113981" stop="115134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114281" g_stop="114834" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114281" e_stop="114834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCTACCGACTGAGGAGGTAATAAGAGAAGGGGAGGATGGGGAAACTGAACAAGTGCAAAATGAGGAAATGCCACCCCAACCTACCCTAGAGATGATCAATCAGGTTCTGGCTTATCTTAGCGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGACTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGCCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGAAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="116191" stop="115265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115891" g_stop="115561" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115891" e_stop="115561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTGTCCCAGGCTTGGCTAACGTCACTGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGAAATTCACAATGTAATTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="-" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="118663" stop="117886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118363" g_stop="118187" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="-" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118363" e_stop="118187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCGAATGGAGCCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335078" ref_strand="+" ref_description="SGN-U335078        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 1e-06, score=56.6)">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="112430" stop="120901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119934" g_stop="120038" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120039" i_stop="120190" i_length="152">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120191" g_stop="120601" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="515" r_length="410" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U335078" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119934" e_stop="120038"/>
          <exon e_start="120191" e_stop="120601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGCATATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGCTGATTTTATGATATTGCTTAATGCATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGA........................................................................................................................................................ATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGG-GTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333723" ref_strand="-" ref_description="SGN-U333723        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:3830613-3830972 REVERSE | Aliases: F7B19.23, F7B19_23(evalue: 3e-18, score=84.7) genbank/nr: putative(evalue: 5e-22, score=107)">
      <seq>gaacagatttcacagaacagacacgttccttgctgaaaattgctataaaggaagtcaattttgattttcaaacactgaaaattttccttctcngtattatttttctctaaaaaaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgctgttctgaagtttgctgaagttaaagaagtttgagaaaaaaaaagactaactcaagtcaaacaaatgctggaatagtaagtgctgcaacaacatcggctgcacataatcattcagatgctatcttagcggcggctgagaaacctgcagagttttctggagtcgactttgagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcattaatgagaatgttcctgtttatcagatgaaactccggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgaacaacaatgccaaaacctcaaagaactcttggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggtaaaatttttggactataagatgatagacaataagactgtcgtcacccaagttcaagaattgcaggtcataatccatgatctgtgctgaatgtataaatttatttaatgcctatgttagaaatattaagttttcccttaataaatttatttaattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="126810" stop="128234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127109" g_stop="127304" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127305" i_stop="127732" i_length="428">
            <donor d_prob="0.807" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127733" g_stop="128234" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="673" r_length="486" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="748" polyA_stop="757"/>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U333723" ref_strand="-">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333723" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="127109" e_stop="127304"/>
          <exon e_start="127733" e_stop="128234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGATTTCACTGAACAGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTTCATTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTATTCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTATTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTCTGTTTATTAACTTTATAAATACAAGTTATTGTAAGAATAACAATCTTAAGAAATTTAGACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGATTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTTCAAAGTTTTCTGGAGTCGACTTTAAGAGAT-GCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCACCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTATAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATC</genome_strand>
        <mrna_strand>GAACAGATTTCACAGAACAGACACGTTCCTTGCTGAAAATTGCTAT-AAAGGAAGTCAA-TTTTGA-TTTTCAAACACTGAAAA--TTTTCCTTCTCNGTATT-ATTTTTCTCT-AAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTGAAGTTTGCTGAAGTTAAAGAAGTTT--G............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAAAAAAGACTAACTCAAGTCAAACAAATGCTGGAATAGTAAGTGCTGCAACAACATCGGCTGCACATAATCATTCAGATGCTATCTTAGCGGCGGCTGAGAAACCTGCAGAGTTTTCTGGAGTCGACTTTGAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATTAATGAGAATGTTCCTGTT-TATCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGA-----AC-------A-A-CAATGCCAAAACCTC-AAAGAACTCTTGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGG-TAAAATTTTTGGACTATAAGATGATAGACAATAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312594" ref_strand="+" ref_description="SGN-U312594        Tomato 200607 #1 [17 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:3830613-3830972 REVERSE | Aliases: F7B19.23, F7B19_23(evalue: 2e-31, score=133) genbank/nr: gi|14586969|gb|AAK70407.1| pol polyprotein [Citrus x paradisi](evalue: 2e-61, score=239)">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgatctgtacaatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggcaaaatttctagactttaagatgatagacagtaagactgtcgtcacccaagttcaagaattgcaggttataatccatgatctccttgctgaaggattgattgtgaatgatgcttttcaagtggctgcaattattgaaaagttacctctattgtggaaggactttaaaaactacttgaaacacaaacgcaaggagatgattgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C04SLm0143K21-jeIHV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C04SLm0143K21.1" temp_strand="+" temp_description="C04SLm0143K21.1  CU074337.8 htgs_phase:3 submitted_to_sgn_as:C04SLm0143K21 sequenced_by:sanger upload_account_name:uk">
        <position start="126828" stop="128234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127127" g_stop="128234" g_length="1108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1098" r_length="1098" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C04SLm0143K21.1" gen_strand="+" ref_id="SGN-U312594" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>1108</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C04SLm0143K21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127127" e_stop="128234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTTCATTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTATTCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTATTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTCTGTTTATTAACTTTATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTAGACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGATTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTTCAAAGTTTTCTGGAGTCGACTTTAAGAGAT-GCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCACCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTATAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATC</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTA------TTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGAC--AG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGC-AAAATTTCTAGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTTATAATCCATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>37</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8640" PGL_stop="9225"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8640" e_stop="9225"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="8640" e_stop="9225" e_length="586"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8640" stop="9225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328094" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCTGTAAGAATAGTGTGAATCAAATCATCGACGCGGGGTACACATACCCTTCCCTTAATTCTCAAAACACCTTTCTCATCAATTTTTGCTTCTTTAGCCTCTCCACGCGATACCTTATCTCGAATCCGGATCAGTTTCTCATCAGTAAACTGCTTTCCCTTAATCTTGTCAAGAAAGGAAGATCTTGCCTCCACACAGGCCAAAAATCCTCCCTTCTCTAGTACTTCCAGCCTCATATAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAATGAGCGTTTAGAAACCTGCAAGTGAGCTAGACTTCCCATGCTTCATGCCTTTCTATTTAAAGCATCCGCCACAACATAGCCTTTCCCGGATGATACAAGATAGTGATATCATAGTCCTTTAGTAGTTCCATCCACCTCCTCTGTCTCAAATTCAAATCTTTCTGAGTAAAGACATACTGTAAACTACGATGATCCGTATAGACTTCACACTTAACCCCATATAGATAATGTCTCCATTGCTTTAATGCAAACACTACTGCAGCCAACTCCAAATCGTGGGTCGGATAATTACGTTCATGCACCTTTAATTGC</gDNA_template>
            <first_frame> P  L  *  E  *  C  E  S  N  H  R  R  G  V  H  I  P  F  P  *  F  S  K  H  L  S  H  Q  F  L  L  L  *  P  L  H  A  I  P  Y  L  E  S  G  S  V  S  H  Q  *  T  A  F  P  *  S  C  Q  E  R  K  I  L  P  P  H  R  P  K  I  L  P  S  L  V  L  P  A  S  Y  S  H  *  L  E  S  E  P  L  *  P  M  S  V  *  K  P  A  S  E  L  D  F  P  C  F  M  P  F  Y  L  K  H  P  P  Q  H  S  L  S  R  M  I  Q  D  S  D  I  I  V  L  *  *  F  H  P  P  P  L  S  Q  I  Q  I  F  L  S  K  D  I  L  *  T  T  M  I  R  I  D  F  T  L  N  P  I  *  I  M  S  P  L  L  *  C  K  H  Y  C  S  Q  L  Q  I  V  G  R  I  I  T  F  M  H  L  *  L  </first_frame>
            <second_frame>  L  C  K  N  S  V  N  Q  I  I  D  A  G  Y  T  Y  P  S  L  N  S  Q  N  T  F  L  I  N  F  C  F  F  S  L  S  T  R  Y  L  I  S  N  P  D  Q  F  L  I  S  K  L  L  S  L  N  L  V  K  K  G  R  S  C  L  H  T  G  Q  K  S  S  L  L  *  Y  F  Q  P  H  I  V  I  S  *  S  L  N  L  S  S  Q  *  A  F  R  N  L  Q  V  S  *  T  S  H  A  S  C  L  S  I  *  S  I  R  H  N  I  A  F  P  G  *  Y  K  I  V  I  S  *  S  F  S  S  S  I  H  L  L  C  L  K  F  K  S  F  *  V  K  T  Y  C  K  L  R  *  S  V  *  T  S  H  L  T  P  Y  R  *  C  L  H  C  F  N  A  N  T  T  A  A  N  S  K  S  W  V  G  *  L  R  S  C  T  F  N  C </second_frame>
            <third_frame>   S  V  R  I  V  *  I  K  S  S  T  R  G  T  H  T  L  P  L  I  L  K  T  P  F  S  S  I  F  A  S  L  A  S  P  R  D  T  L  S  R  I  R  I  S  F  S  S  V  N  C  F  P  L  I  L  S  R  K  E  D  L  A  S  T  Q  A  K  N  P  P  F  S  S  T  S  S  L  I  *  S  L  A  R  V  *  T  S  L  A  N  E  R  L  E  T  C  K  *  A  R  L  P  M  L  H  A  F  L  F  K  A  S  A  T  T  *  P  F  P  D  D  T  R  *  *  Y  H  S  P  L  V  V  P  S  T  S  S  V  S  N  S  N  L  S  E  *  R  H  T  V  N  Y  D  D  P  Y  R  L  H  T  *  P  H  I  D  N  V  S  I  A  L  M  Q  T  L  L  Q  P  T  P  N  R  G  S  D  N  Y  V  H  A  P  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8641" stop="8862"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCKNSVNQIIDAGYTYPSLNSQNTFLINFCFFSLSTRYLISNPDQFLISKLLSLNLVKKGRSCLHTGQKSSLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8660" stop="8881"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKSSTRGTHTLPLILKTPFSSIFASLASPRDTLSRIRISFSSVNCFPLILSRKEDLASTQAKNPPFSSTSSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="10741" PGL_stop="10082"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10741" e_stop="10082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="10741" e_stop="10082" e_length="660"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10741" stop="10082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335936" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATCCTGGCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGGTTTTGATTTACATTGTGATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTGGCTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCCTAGAAATGGTTGACTTCGATGTATTTCTGGGTATGACTTGGCTTTCTCTAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGTCCAAGCCTGGGACAGATCCGTTAGTATGGGAGGGTGATTACACTTCCACTCCAATTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCGGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTACTCTCCCCATTTCATATCCCCTTATAGAATGACTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTTAAGAGTTGTTAGGCAAAGGCTTCATTAGACCAAGTGCTTCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  S  F  A  T  G  F  D  L  H  C  D  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  V  Y  R  S  C  L  V  A  F  V  G  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  F  L  G  M  T  W  L  S  L  N  F  A  I  L  D  C  N  A  K  T  V  T  L  S  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  T  P  I  R  I  I  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  L  A  H  L  R  D  D  T  T  Q  V  P  S  I  E  S  V  S  I  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  L  P  I  S  Y  P  L  I  E  *  L  P  L  S  *  G  S  *  R  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  L  P  L  G </first_frame>
            <second_frame>  L  I  L  A  P  H  F  H  M  Y  L  P  H  L  L  L  V  L  I  Y  I  V  I  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  R  C  I  G  L  V  L  W  L  L  W  G  A  I  L  M  *  T  W  L  S  *  K  W  L  T  S  M  Y  F  W  V  *  L  G  F  L  *  I  L  Q  S  *  I  V  M  L  K  L  *  R  C  P  S  L  G  Q  I  R  *  Y  G  R  V  I  T  L  P  L  Q  F  V  S  S  P  F  F  V  L  R  E  W  L  V  K  G  V  *  L  S  W  H  T  S  G  M  I  L  P  K  Y  L  Q  L  S  R  F  R  *  S  V  S  F  W  M  C  F  L  Q  T  F  L  V  C  H  R  I  G  I  L  T  F  A  L  I  W  S  R  V  L  S  P  F  H  I  P  L  *  N  D  S  R  *  V  K  G  V  K  G  P  T  L  R  V  V  R  Q  R  L  H  *  T  K  C  F  P  L   </second_frame>
            <third_frame>   *  S  W  L  H  I  F  I  C  I  F  L  I  C  Y  W  F  *  F  T  L  *  F  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  G  F  C  G  E  Q  Y  S  C  R  L  G  Y  P  R  N  G  *  L  R  C  I  S  G  Y  D  L  A  F  S  K  F  C  N  L  R  L  *  C  *  N  C  N  V  V  Q  A  W  D  R  S  V  S  M  G  G  *  L  H  F  H  S  N  S  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  P  Q  G  *  Y  Y  P  S  T  F  N  *  V  G  F  D  S  P  *  V  S  G  C  V  S  C  R  P  S  W  Y  A  T  G  *  G  Y  *  L  L  H  *  S  G  A  G  Y  S  P  H  F  I  S  P  Y  R  M  T  P  A  E  L  R  E  L  K  A  Q  L  *  E  L  L  G  K  G  F  I  R  P  S  A  S  P  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10741" stop="10166"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPGSTFSYVSSSFATGFDLHCDLLDMPIRVSTPVGESVIVEKVYRSCLVAFVGSNTHVDLVILEMVDFDVFLGMTWLSLNFAILDCNAKTVTLSKPGTDPLVWEGDYTSTPIRIISFLRAKRMVSKGCLAFLAHLRDDTTQVPSIESVSIVREFLDVFPADLPGMPPDRDIDFCIDLEPGTLPISYPLIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="10441" PGL_stop="10771"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10441" e_stop="10771"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="10441" e_stop="10771" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10441" stop="10771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGGCTTGGACAACGTTACAGTTTTAGCATTACAATCTAAGATTGCAAAATTTAGAGAAAGCCAAGTCATACCCAGAAATACATCGAAGTCAACCATTTCTAGGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGCCACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATCACAATGTAAATCAAAACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGAGCCAGGATCAAATAATACAGAAGTCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  T  T  L  Q  F  *  H  Y  N  L  R  L  Q  N  L  E  K  A  K  S  Y  P  E  I  H  R  S  Q  P  F  L  G  *  P  S  L  H  E  Y  C  S  P  Q  K  P  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  N  H  N  V  N  Q  N  Q  *  Q  M  R  K  I  H  M  K  M  W  S  Q  D  Q  I  I  Q  K  S  C  N  H  K  P  </first_frame>
            <second_frame>  I  C  P  R  L  G  Q  R  Y  S  F  S  I  T  I  *  D  C  K  I  *  R  K  P  S  H  T  Q  K  Y  I  E  V  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  H  K  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  I  T  M  *  I  K  T  S  S  K  *  G  R  Y  I  *  K  C  G  A  R  I  K  *  Y  R  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  D  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  R  E  S  Q  V  I  P  R  N  T  S  K  S  T  I  S  R  I  T  K  S  T  *  V  L  L  P  T  K  A  T  R  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  K  S  Q  C  K  S  K  P  V  A  N  E  E  D  T  Y  E  N  V  E  P  G  S  N  N  T  E  V  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10572" stop="10769"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLLPTKATRQDLYTFSTITDSPTGVETRIGMSSKSQCKSKPVANEEDTYENVEPGSNNTEVMQSQT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="12002" PGL_stop="11351"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12002" e_stop="11351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="12002" e_stop="11351" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12002" stop="11351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346572" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATGATTAACCAGGTTCTTGCTTATCTTAGCGGGTAATCCGATCAAGGCCAAACGCCTCCAGTGTTTTCTGCACTAGCACCGTAGGTTCCGGGAGTACAACATGCAGCTGCTATGGCTCCCCGCATGGATGCCTCATTAGAAATAAGAACGTTTCCTCGATTGACTACAGGGCCTATAATGACGAGTAATCAACACGAACTTTTCATGAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATAATTTTCTGGTTGATTGTCATGAGCTGCTACATAAGATGGGCATAGTGGAACAGGTGTTGAGTTTGTAACCTATCAGTTTCAGGGAAATGCCAAAATGTGGTGGCGATCGTATGTTGAGTGTCAACCAGCACATGCACCACCTATGACTTGGGCATCATTCTCTAGCTTGTTTATGGAGAAGTATATACCCCGGACCTTGAGGGATAGGAGGAGGGATGAATTCCTGAGCCTAGAGCAAGGCAGGATGTCTGTTACTGATTATGAGGATAAGTTTCGTGCATTATCCAGGCATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCGCCGTTTTGTGAAGGGATTGAGGTCAGATTTGCAGATTCCAGCCTTACAGGTAGCA</gDNA_template>
            <first_frame> R  *  L  T  R  F  L  L  I  L  A  G  N  P  I  K  A  K  R  L  Q  C  F  L  H  *  H  R  R  F  R  E  Y  N  M  Q  L  L  W  L  P  A  W  M  P  H  *  K  *  E  R  F  L  D  *  L  Q  G  L  *  *  R  V  I  N  T  N  F  S  *  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  P  I  I  F  W  L  I  V  M  S  C  Y  I  R  W  A  *  W  N  R  C  *  V  C  N  L  S  V  S  G  K  C  Q  N  V  V  A  I  V  C  *  V  S  T  S  T  C  T  T  Y  D  L  G  I  I  L  *  L  V  Y  G  E  V  Y  T  P  D  L  E  G  *  E  E  G  *  I  P  E  P  R  A  R  Q  D  V  C  Y  *  L  *  G  *  V  S  C  I  I  Q  A  C  H  P  A  L  L  Q  S  T  R  A  D  S  P  F  C  E  G  I  E  V  R  F  A  D  S  S  L  T  G  S  </first_frame>
            <second_frame>  D  D  *  P  G  S  C  L  S  *  R  V  I  R  S  R  P  N  A  S  S  V  F  C  T  S  T  V  G  S  G  S  T  T  C  S  C  Y  G  S  P  H  G  C  L  I  R  N  K  N  V  S  S  I  D  Y  R  A  Y  N  D  E  *  S  T  R  T  F  H  E  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  *  F  S  G  *  L  S  *  A  A  T  *  D  G  H  S  G  T  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  Y  V  E  C  Q  P  A  H  A  P  P  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  R  T  L  R  D  R  R  R  D  E  F  L  S  L  E  Q  G  R  M  S  V  T  D  Y  E  D  K  F  R  A  L  S  R  H  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  D  L  Q  I  P  A  L  Q  V  A </second_frame>
            <third_frame>   M  I  N  Q  V  L  A  Y  L  S  G  *  S  D  Q  G  Q  T  P  P  V  F  S  A  L  A  P  *  V  P  G  V  Q  H  A  A  A  M  A  P  R  M  D  A  S  L  E  I  R  T  F  P  R  L  T  T  G  P  I  M  T  S  N  Q  H  E  L  F  M  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  N  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  Q  V  L  S  L  *  P  I  S  F  R  E  M  P  K  C  G  G  D  R  M  L  S  V  N  Q  H  M  H  H  L  *  L  G  H  H  S  L  A  C  L  W  R  S  I  Y  P  G  P  *  G  I  G  G  G  M  N  S  *  A  *  S  K  A  G  C  L  L  L  I  M  R  I  S  F  V  H  Y  P  G  M  P  P  S  F  A  S  V  H  K  S  G  F  A  V  L  *  R  D  *  G  Q  I  C  R  F  Q  P  Y  R  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11701" stop="11351"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGHSGTGVEFVTYQFQGNAKMWWRSYVECQPAHAPPMTWASFSSLFMEKYIPRTLRDRRRDEFLSLEQGRMSVTDYEDKFRALSRHATQLCFSPQERIRRFVKGLRSDLQIPALQVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="12240" PGL_stop="45847"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18965" e_stop="21648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="18965" e_stop="21648" e_length="2684"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18965" stop="19677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19485" stop="20142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19554" stop="20310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20167" stop="21603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21242" stop="21648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAATAGCTAGCTAAACCAACAAAACTCCTTATTTTTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACAATCACCCCATCCTTAGAAACCACATGCCCCAAGAAGGACAGTGCATCTAGACAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATGAATACAATCACAAAGATATCCTAATATGGCTTAAAAATCTCGTTCATCAAACTCATGAATGCAGTAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGTCCATACCTGGTTCTAAAAATAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGATAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTAATAGTTACTTTGTTCAACTGCCGGTAGTCTATACACATCCGAAAACTCCCATCCTTCTTCTTTACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGTGGGAGCCATTCTATAAGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCAGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACTAGACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAATAGAAACACGAATAGGCGTATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAAGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTGTTTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCCCGGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCTTCCAGAATAATGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTCTATTTGGGACAATTCCTCCTAATATGCCCAGTCTCCCCACATCCATAACACTCTATAGAGTCAAGTATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTATAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAATCCTCTTTGATGTCGATGCCATTGTGAAATCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACTTGTAAGGCTGAAATCCGCAATTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTATCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTAAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGAAAACGTGCCCATGTCCAATGAGGCATCCATACGAGGAGACATAGTGGCTGCATGTTGTACCTCTAAAATCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCCTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTTTGCACTTGTTCAGTTTCCCCTTCCTCACCCTCTCTTACTACTTCTTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAAGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCG</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  I  A  S  *  T  N  K  T  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  N  H  P  I  L  R  N  H  M  P  Q  E  G  Q  C  I  *  T  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  I  N  E  Y  N  H  K  D  I  L  I  W  L  K  N  L  V  H  Q  T  H  E  C  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  S  I  P  G  S  K  N  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  *  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  V  L  V  L  N  S  Y  F  V  Q  L  P  V  V  Y  T  H  P  K  T  P  I  L  L  L  Y  E  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  S  I  R  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  R  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  R  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  I  E  T  R  I  G  V  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  R  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  V  S  A  S  D  L  P  G  K  A  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  L  P  E  *  W  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  Y  L  G  Q  F  L  L  I  C  P  V  S  P  H  P  *  H  S  I  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  Y  S  E  D  *  M  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  Q  I  L  F  D  V  D  A  I  V  K  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  R  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  I  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  R  E  N  V  P  M  S  N  E  A  S  I  R  G  D  I  V  A  A  C  C  T  S  K  I  G  G  V  G  A  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  C  T  C  S  V  S  P  S  S  P  S  L  T  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G  L  S  A  R  P  L  P  L  E  D  V  L  P  R  P   </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  K  P  T  K  L  L  I  F  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  S  A  S  R  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  S  L  L  L  E  Y  I  S  I  S  S  M  N  T  I  T  K  I  S  *  Y  G  L  K  I  S  F  I  K  L  M  N  A  V  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  L  K  I  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  D  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  L  I  V  T  L  F  N  C  R  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L  N  S  V  G  A  I  L  *  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  Q  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  S  L  D  K  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  S  P  P  P  I  S  Q  G  K  H  N  N  G  P  F  R  L  F  V  H  C  P  Y  H  V  V  M  *  W  L  Q  F  A  H  H  P  G  R  F  G  D  H  H  Y  L  D  H  H  V  F  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  L  L  G  V  Y  N  S  I  W  D  N  S  S  *  Y  A  Q  S  P  H  I  H  N  T  L  *  S  Q  V  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  I  V  K  T  E  W  V  E  L  S  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  K  S  S  L  M  S  M  P  L  *  N  H  L  A  S  L  L  P  P  L  P  R  N  L  P  L  L  G  R  I  L  P  *  P  L  L  V  R  L  K  S  A  I  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  I  W  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  T  A  T  T  F  W  H  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  V  S  H  D  S  Q  P  E  N  R  K  H  P  Q  I  Q  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  K  T  C  P  C  P  M  R  H  P  Y  E  E  T  *  W  L  H  V  V  P  L  K  S  E  V  L  V  Q  K  T  L  E  V  P  D  P  D  Q  T  T  H  *  D  K  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  F  A  L  V  Q  F  P  L  P  H  P  L  L  L  L  L  Q  S  V  E  E  S  L  P  *  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  S  S  H  D  L  </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  N  S  *  L  N  Q  Q  N  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  Q  S  P  H  P  *  K  P  H  A  P  R  R  T  V  H  L  D  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  P  Y  F  *  S  I  S  V  Y  H  Q  *  I  Q  S  Q  R  Y  P  N  M  A  *  K  S  R  S  S  N  S  *  M  Q  *  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  V  H  T  W  F  *  K  *  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  I  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  G  T  C  S  *  *  L  L  C  S  T  A  G  S  L  Y  T  S  E  N  S  H  P  S  S  L  R  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  W  E  P  F  Y  K  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  Q  R  K  P  S  H  T  Q  N  Y  I  K  I  N  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  K  V  H  *  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  N  R  N  T  N  R  R  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  K  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  L  R  S  P  R  E  S  I  T  M  G  P  F  V  C  L  S  I  A  P  T  M  L  *  C  S  G  S  S  L  P  I  T  P  A  V  L  V  T  T  I  T  S  T  T  T  S  S  R  I  M  A  S  T  M  T  T  S  T  S  S  Y  W  G  S  I  T  L  F  G  T  I  P  P  N  M  P  S  L  P  T  S  I  T  L  Y  R  V  K  Y  R  S  L  R  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  *  R  L  N  G  S  N  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  N  P  L  *  C  R  C  H  C  E  I  I  W  L  H  S  F  H  L  Y  H  E  I  Y  H  F  L  E  G  F  C  R  S  R  Y  L  *  G  *  N  P  Q  F  *  P  Q  P  L  H  K  T  T  N  P  L  L  W  T  E  T  K  L  G  G  I  S  G  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  A  R  E  *  G  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  P  P  P  H  F  G  I  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  *  Y  L  M  T  V  N  Q  K  I  V  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  K  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  *  K  R  A  H  V  Q  *  G  I  H  T  R  R  H  S  G  C  M  L  Y  L  *  N  R  R  C  W  C  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  F  L  I  L  H  L  F  S  F  P  F  L  T  L  S  Y  Y  F  F  S  R  W  R  S  H  C  P  S  I  R  W  A  K  C  S  S  S  S  S  R  G  R  P  P  T  T  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20705" stop="21094"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFQILFDVDAIVKSSGFTPSTSTTKSTTSWKDFAVAATCKAEIRNSDLNPFTKRRIRSCGLKQSWVAYLDSARNLASYALTDILPCSRLKNSSLFLSLKVRGIYFSINKLENEAQVIGGASVG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19130" stop="19450"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKLTLRELGIKLFLPQHFQYHSQMLLMFLLTFRVYQYIINEYNHKDILIWLKNLVHQTHECSRGIRKTKRHHYKFVMSIPGSKNSLWHIRCPYFQLMITGSQVNLR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19670" stop="19936"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRGSHSIRGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20395" stop="20649"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSSLPITPAVLVTTITSTTTSSRIMASTMTTSTSSYWGSITLFGTIPPNMPSLPTSITLYRVKYRSLREVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21397" stop="21648"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRRCWCRKHWRCLTLIRQPTKISENLIDHLWGRLGWQFLILHLFSFPFLTLSYYFFSRWRSHCPSIRWAKCSSSSSRGRPPTTS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="33446" e_stop="34670"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="33446" e_stop="34670" e_length="1225"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33446" stop="34670"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316320" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33858" stop="34167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335597" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTTGTTGTTTTATATGGGTTAGTATCATAAACCTCTTTATTTTGTTAAGTAGCATGTTCTATGCCATCTATACTTGCTTTGTATAGTTTCTGTTCTGCGTTAATTCCTGTTGTAGATGCTTAGTTTTGTTATGTGTAATGAATAACAACTCACTGGTTTGAAAGCTTTAAATATGTAAGTTGGGTAATTGGATTCAAAACTTTGGTTCTAGTATTTTATTTCTCGTCTTAATAGTTTCTTAAATACAGGTGATTTGCTCTTTATAGTTTAGTTTTCTTAATTATATCGGAAATGGATAAGAAGCCTCTTGTTTGTTCTTATGTTAGATATTATTCTCTTTTAGGTCTAGTCGATTTGTTTTCTTTTTAAATGCCCCGTGTAATTCAAATTATCTCAAGGTTTCTTTGCTTCTCAAATAGATGTTGGTCTCATTTTGATTTTTAATGTGAGCTCATTTAAAGTTCCTTTCCATTTTGTGTCTTAAACTGTTTATTTGAGATATGTTATCTAGTTTTGAATGTTCACTGGCTTAGATTAATATTATTTATGATTGATTCTAATTCTTATCTTTTCTTCCTTTTCTCTACTCTGCATGAGCACTTCGAGTTCAATGGACTCCACTTCTCTTGCATTATTCCACTTCTTGAGTCAACCTTCTTCGGAGTCGTGAAAGGGAGTCATGTTATTGGGTTAAACACCCAAAAATCAGCAGCAACAACAGCTCCAAATAGCTCAATAAATTGGGTTTAAACACCCAAAAAATGCAACAGCAGCAGTAGCCTTAAAAGGCCAAACCTGAAGCAGCAACTACAGGTCCCCAAAGGGACACAAATTGTTGATTCAAGTCCAATTTATATAGTAATCCCGGCAGCAGCTAAGCAAGAAGCATGAAATGGGGGTTAAAAACCAAAATCGATGAAGTAACAAATCGACATTTCAGCCCCCGAAATTTCAGTTTTATAATTTATTATTTATGTTTGTCTTCTCGTTATTATTTTGGTCATTGTGAATGCTAACCCTTTGTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGAATGGCTATTCCATTTCGTTACTTGTTTA</gDNA_template>
            <first_frame> L  A  I  L  H  N  H  V  F  S  P  D  V  A  G  C  F  P  F  C  *  I  L  N  *  M  L  Q  D  M  H  V  V  L  I  F  D  S  M  I  S  L  L  F  Y  M  G  *  Y  H  K  P  L  Y  F  V  K  *  H  V  L  C  H  L  Y  L  L  C  I  V  S  V  L  R  *  F  L  L  *  M  L  S  F  V  M  C  N  E  *  Q  L  T  G  L  K  A  L  N  M  *  V  G  *  L  D  S  K  L  W  F  *  Y  F  I  S  R  L  N  S  F  L  N  T  G  D  L  L  F  I  V  *  F  S  *  L  Y  R  K  W  I  R  S  L  L  F  V  L  M  L  D  I  I  L  F  *  V  *  S  I  C  F  L  F  K  C  P  V  *  F  K  L  S  Q  G  F  F  A  S  Q  I  D  V  G  L  I  L  I  F  N  V  S  S  F  K  V  P  F  H  F  V  S  *  T  V  Y  L  R  Y  V  I  *  F  *  M  F  T  G  L  D  *  Y  Y  L  *  L  I  L  I  L  I  F  S  S  F  S  L  L  C  M  S  T  S  S  S  M  D  S  T  S  L  A  L  F  H  F  L  S  Q  P  S  S  E  S  *  K  G  V  M  L  L  G  *  T  P  K  N  Q  Q  Q  Q  Q  L  Q  I  A  Q  *  I  G  F  K  H  P  K  N  A  T  A  A  V  A  L  K  G  Q  T  *  S  S  N  Y  R  S  P  K  G  H  K  L  L  I  Q  V  Q  F  I  *  *  S  R  Q  Q  L  S  K  K  H  E  M  G  V  K  N  Q  N  R  *  S  N  K  S  T  F  Q  P  P  K  F  Q  F  Y  N  L  L  F  M  F  V  F  S  L  L  F  W  S  L  *  M  L  T  L  C  F  V  V  N  F  F  *  N  L  D  E  S  F  G  G  F  R  M  A  I  P  F  R  Y  L  F  </first_frame>
            <second_frame>  *  Q  Y  Y  I  T  M  F  F  P  Q  T  L  L  V  A  F  L  S  V  R  F  *  I  K  C  F  R  I  C  M  S  F  *  Y  L  I  V  *  F  L  C  C  F  I  W  V  S  I  I  N  L  F  I  L  L  S  S  M  F  Y  A  I  Y  T  C  F  V  *  F  L  F  C  V  N  S  C  C  R  C  L  V  L  L  C  V  M  N  N  N  S  L  V  *  K  L  *  I  C  K  L  G  N  W  I  Q  N  F  G  S  S  I  L  F  L  V  L  I  V  S  *  I  Q  V  I  C  S  L  *  F  S  F  L  N  Y  I  G  N  G  *  E  A  S  C  L  F  L  C  *  I  L  F  S  F  R  S  S  R  F  V  F  F  L  N  A  P  C  N  S  N  Y  L  K  V  S  L  L  L  K  *  M  L  V  S  F  *  F  L  M  *  A  H  L  K  F  L  S  I  L  C  L  K  L  F  I  *  D  M  L  S  S  F  E  C  S  L  A  *  I  N  I  I  Y  D  *  F  *  F  L  S  F  L  P  F  L  Y  S  A  *  A  L  R  V  Q  W  T  P  L  L  L  H  Y  S  T  S  *  V  N  L  L  R  S  R  E  R  E  S  C  Y  W  V  K  H  P  K  I  S  S  N  N  S  S  K  *  L  N  K  L  G  L  N  T  Q  K  M  Q  Q  Q  Q  *  P  *  K  A  K  P  E  A  A  T  T  G  P  Q  R  D  T  N  C  *  F  K  S  N  L  Y  S  N  P  G  S  S  *  A  R  S  M  K  W  G  L  K  T  K  I  D  E  V  T  N  R  H  F  S  P  R  N  F  S  F  I  I  Y  Y  L  C  L  S  S  R  Y  Y  F  G  H  C  E  C  *  P  F  V  L  L  L  T  F  F  K  T  *  M  N  P  L  E  V  F  E  W  L  F  H  F  V  T  C  L </second_frame>
            <third_frame>   S  N  I  T  *  P  C  F  F  P  R  R  C  W  L  L  S  F  L  L  D  F  E  L  N  A  S  G  Y  A  C  R  F  N  I  *  *  Y  D  F  F  V  V  L  Y  G  L  V  S  *  T  S  L  F  C  *  V  A  C  S  M  P  S  I  L  A  L  Y  S  F  C  S  A  L  I  P  V  V  D  A  *  F  C  Y  V  *  *  I  T  T  H  W  F  E  S  F  K  Y  V  S  W  V  I  G  F  K  T  L  V  L  V  F  Y  F  S  S  *  *  F  L  K  Y  R  *  F  A  L  Y  S  L  V  F  L  I  I  S  E  M  D  K  K  P  L  V  C  S  Y  V  R  Y  Y  S  L  L  G  L  V  D  L  F  S  F  *  M  P  R  V  I  Q  I  I  S  R  F  L  C  F  S  N  R  C  W  S  H  F  D  F  *  C  E  L  I  *  S  S  F  P  F  C  V  L  N  C  L  F  E  I  C  Y  L  V  L  N  V  H  W  L  R  L  I  L  F  M  I  D  S  N  S  Y  L  F  F  L  F  S  T  L  H  E  H  F  E  F  N  G  L  H  F  S  C  I  I  P  L  L  E  S  T  F  F  G  V  V  K  G  S  H  V  I  G  L  N  T  Q  K  S  A  A  T  T  A  P  N  S  S  I  N  W  V  *  T  P  K  K  C  N  S  S  S  S  L  K  R  P  N  L  K  Q  Q  L  Q  V  P  K  G  T  Q  I  V  D  S  S  P  I  Y  I  V  I  P  A  A  A  K  Q  E  A  *  N  G  G  *  K  P  K  S  M  K  *  Q  I  D  I  S  A  P  E  I  S  V  L  *  F  I  I  Y  V  C  L  L  V  I  I  L  V  I  V  N  A  N  P  L  F  C  C  *  L  F  L  K  L  R  *  I  L  W  R  F  S  N  G  Y  S  I  S  L  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34027" stop="34317"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSFPFCVLNCLFEICYLVLNVHWLRLILFMIDSNSYLFFLFSTLHEHFEFNGLHFSCIIPLLESTFFGVVKGSHVIGLNTQKSAATTAPNSSINWV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="32526" e_stop="33570"/>
            <exon e_start="34590" e_stop="34642"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.985"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="32526" e_stop="33570" e_length="1045"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33571" i_stop="34589" i_length="1019"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34590" e_stop="34642" e_length="53"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32526" stop="33570"/>
              <exon start="34590" stop="34642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316321" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGCTCGCATCAGACGCGAAATCAGCAAACACCGCGTGCTCTCCTTATCGTCTCGTACAGGCGTACCCGAACAGAGCAGGTGTCTCAATCCTGTCGCTCGCTCGTCCTTACTCATAATCGGATGGCCTTGGTTCTGAATCCGTTGAGAATTCGTACGAATTCCAGCTCCCTCGACCTTATCCATTAAGAGTTCTGAATTGTGAGGCATTCCCACATCGTTTTCCCCCTCAATTCCAACCCAGAAGTGGCCCTATATAAACCCTCTTCATTCACTGTTTTAGGAGAGGATTTTCGGAGACCAAAGAGTACCCATAAAATTTTGGGAATTCTTGGTCCCATAGTTCAAAATTTTAAAGCGTTTTGTGGCTTTCGAGTTGAAGAGGTGGAGTCGTCTTGGAAGACTCGTCGCTGCGCAGAACCAGGTAATCTTCTTGCCCTTTGTCAGTGTTGCATTCTAGAGTTGTTATTTGTTTAGATTCAATATGATTAGTGGTGTGAATGACAGTGGAAGTCTTCTTAAAGTTAAGTAAATTTTGAAGGAGTTCAAATGTTTTGCTCTGCTGAAAGTTATTTTCCATGTCAATGTGATTCTTTATTTCATCAAGTTCATAAATCCATACATGTGTTTCCACTTACTATTATCTCTATTCGGTTGGAAATTTGTGCGATATAGTTGGTTTTTTTTTTGCCTTAAGTTGTTGTGTTCTGCATAAAGATTATCACCTCGCCTTTTGCCAAAGCCTGATTTCTCGTATCTGTTTTATAAATACTAGGTTGTGCAACTGCTGTTTTGTTATATTAAGGTGAAAATTAGTTGTTGGGTTGCTTTCTTATTGTCTTCAAAACGTTTTGATTGCTATTGATATGAAAAATGTCTTTATTTCCTACCTTAGCTTCTTTGATCCATAGTTGTGCATACCTTAGCAATATTACATAACCATGTTTTTTCCCCAGACGTTGCTGGTTGCTTTCCTTTCTGTTAGATTTTGAATTAAATGCTTCAGGATATGCATGTCGTTTTAATATTTGATAGTATGATTTCTTT : GTTTTGTTGTTAACTTTTTTTAAAACTTAGATGAATCCTTTGGAGGTTTTCGA</gDNA_template>
            <first_frame> Q  L  A  S  D  A  K  S  A  N  T  A  C  S  P  Y  R  L  V  Q  A  Y  P  N  R  A  G  V  S  I  L  S  L  A  R  P  Y  S  *  S  D  G  L  G  S  E  S  V  E  N  S  Y  E  F  Q  L  P  R  P  Y  P  L  R  V  L  N  C  E  A  F  P  H  R  F  P  P  Q  F  Q  P  R  S  G  P  I  *  T  L  F  I  H  C  F  R  R  G  F  S  E  T  K  E  Y  P  *  N  F  G  N  S  W  S  H  S  S  K  F  *  S  V  L  W  L  S  S  *  R  G  G  V  V  L  E  D  S  S  L  R  R  T  R  *  S  S  C  P  L  S  V  L  H  S  R  V  V  I  C  L  D  S  I  *  L  V  V  *  M  T  V  E  V  F  L  K  L  S  K  F  *  R  S  S  N  V  L  L  C  *  K  L  F  S  M  S  M  *  F  F  I  S  S  S  S  *  I  H  T  C  V  S  T  Y  Y  Y  L  Y  S  V  G  N  L  C  D  I  V  G  F  F  F  A  L  S  C  C  V  L  H  K  D  Y  H  L  A  F  C  Q  S  L  I  S  R  I  C  F  I  N  T  R  L  C  N  C  C  F  V  I  L  R  *  K  L  V  V  G  L  L  S  Y  C  L  Q  N  V  L  I  A  I  D  M  K  N  V  F  I  S  Y  L  S  F  F  D  P  *  L  C  I  P  *  Q  Y  Y  I  T  M  F  F  P  Q  T  L  L  V  A  F  L  S  V  R  F  *  I  K  C  F  R  I  C  M  S  F  *  Y  L  I  V  *  F  L   : C  F  V  V  N  F  F  *  N  L  D  E  S  F  G  G  F  R </first_frame>
            <second_frame>  S  S  H  Q  T  R  N  Q  Q  T  P  R  A  L  L  I  V  S  Y  R  R  T  R  T  E  Q  V  S  Q  S  C  R  S  L  V  L  T  H  N  R  M  A  L  V  L  N  P  L  R  I  R  T  N  S  S  S  L  D  L  I  H  *  E  F  *  I  V  R  H  S  H  I  V  F  P  L  N  S  N  P  E  V  A  L  Y  K  P  S  S  F  T  V  L  G  E  D  F  R  R  P  K  S  T  H  K  I  L  G  I  L  G  P  I  V  Q  N  F  K  A  F  C  G  F  R  V  E  E  V  E  S  S  W  K  T  R  R  C  A  E  P  G  N  L  L  A  L  C  Q  C  C  I  L  E  L  L  F  V  *  I  Q  Y  D  *  W  C  E  *  Q  W  K  S  S  *  S  *  V  N  F  E  G  V  Q  M  F  C  S  A  E  S  Y  F  P  C  Q  C  D  S  L  F  H  Q  V  H  K  S  I  H  V  F  P  L  T  I  I  S  I  R  L  E  I  C  A  I  *  L  V  F  F  L  P  *  V  V  V  F  C  I  K  I  I  T  S  P  F  A  K  A  *  F  L  V  S  V  L  *  I  L  G  C  A  T  A  V  L  L  Y  *  G  E  N  *  L  L  G  C  F  L  I  V  F  K  T  F  *  L  L  L  I  *  K  M  S  L  F  P  T  L  A  S  L  I  H  S  C  A  Y  L  S  N  I  T  *  P  C  F  F  P  R  R  C  W  L  L  S  F  L  L  D  F  E  L  N  A  S  G  Y  A  C  R  F  N  I  *  *  Y  D  F  F  :  V  L  L  L  T  F  F  K  T  *  M  N  P  L  E  V  F   </second_frame>
            <third_frame>   A  R  I  R  R  E  I  S  K  H  R  V  L  S  L  S  S  R  T  G  V  P  E  Q  S  R  C  L  N  P  V  A  R  S  S  L  L  I  I  G  W  P  W  F  *  I  R  *  E  F  V  R  I  P  A  P  S  T  L  S  I  K  S  S  E  L  *  G  I  P  T  S  F  S  P  S  I  P  T  Q  K  W  P  Y  I  N  P  L  H  S  L  F  *  E  R  I  F  G  D  Q  R  V  P  I  K  F  W  E  F  L  V  P  *  F  K  I  L  K  R  F  V  A  F  E  L  K  R  W  S  R  L  G  R  L  V  A  A  Q  N  Q  V  I  F  L  P  F  V  S  V  A  F  *  S  C  Y  L  F  R  F  N  M  I  S  G  V  N  D  S  G  S  L  L  K  V  K  *  I  L  K  E  F  K  C  F  A  L  L  K  V  I  F  H  V  N  V  I  L  Y  F  I  K  F  I  N  P  Y  M  C  F  H  L  L  L  S  L  F  G  W  K  F  V  R  Y  S  W  F  F  F  C  L  K  L  L  C  S  A  *  R  L  S  P  R  L  L  P  K  P  D  F  S  Y  L  F  Y  K  Y  *  V  V  Q  L  L  F  C  Y  I  K  V  K  I  S  C  W  V  A  F  L  L  S  S  K  R  F  D  C  Y  *  Y  E  K  C  L  Y  F  L  P  *  L  L  *  S  I  V  V  H  T  L  A  I  L  H  N  H  V  F  S  P  D  V  A  G  C  F  P  F  C  *  I  L  N  *  M  L  Q  D  M  H  V  V  L  I  F  D  S  M  I  S  L :   F  C  C  *  L  F  L  K  L  R  *  I  L  W  R  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32722" stop="33000"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVRHSHIVFPLNSNPEVALYKPSSFTVLGEDFRRPKSTHKILGILGPIVQNFKAFCGFRVEEVESSWKTRRCAEPGNLLALCQCCILELLFV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33138" stop="33332"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHTCVSTYYYLYSVGNLCDIVGFFFALSCCVLHKDYHLAFCQSLISRICFINTRLCNCCFVILR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="22402" e_stop="22714"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="22402" e_stop="22714" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22402" stop="22714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335079" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGATGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACAACT</gDNA_template>
            <first_frame> T  E  *  I  S  L  A  N  S  K  *  R  S  I  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  H  M  M  T  Q  A  S  I  P  Y  S  F  G  N  Y  V  H  *  I  E  Y  I  T  I  F  Q  D  S  L  S  L  F  L  L  C  R  H  V  T  L  R  S  L  I  F  I  N  P  L  V  S  V  R  D  T  P  I  P  Y  N  </first_frame>
            <second_frame>  L  S  R  Y  H  W  P  T  Q  N  R  D  Q  Y  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  S  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  *  L  K  P  Q  Y  H  T  H  L  G  I  M  F  I  R  L  S  I  L  P  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  S  L  I  L  L  C  R  Y  V  T  L  R  S  P  T  T </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  A  S  T  I  S  L  T  I  T  V  K  F  T  H  D  D  S  S  L  N  T  I  L  I  W  E  L  C  S  L  D  *  V  Y  Y  H  L  S  R  F  I  I  F  I  S  L  V  S  A  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04SLm0143K21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="21717" e_stop="22110"/>
            <exon e_start="41559" e_stop="41916"/>
            <exon e_start="45715" e_stop="45847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.911"/>
          <exon-intron don_prob="0.923" acc_prob="0.000" e_score="0.966"/>
          <exon-only e_score="0.880"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="21717" e_stop="22110" e_length="394"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22111" i_stop="41558" i_length="19448"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="41559" e_stop="41916" e_length="358"/>
          </exon>
          <intron i_serial="2" don_prob="0.923" acc_prob="0.000">
            <gDNA_intron_boundary i_start="41917" i_stop="45714" i_length="3798"/>
          </intron>
          <exon e_serial="3" e_score="0.880">
            <gDNA_exon_boundary e_start="45715" e_stop="45847" e_length="133"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21717" stop="22110"/>
              <exon start="41559" stop="41916"/>
              <exon start="45715" stop="45847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315286" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTTGCTCTAGTTCTAACCATCTGCGAAATAGAGTGAAGATGGTCAGATACCAATTTGTATCACCTAGATACCAATTGGACCCAAGTAATAGCACGAAAGAAAGAAAGAAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAAGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCCAAATCGGGTCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATAAATAAAATCAATAACTATTATT : ATTCAACATCTATTATTCCCAAAACCCGGAAGTCATCATCACAAGAACATCTACTTTAAACTACTAATTCTAAGAGTTTCTAAGAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAGAAGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGATTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACAAGAAGGAAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAGAACAGTATATATCAA : ATAATATCATAAAATCAACTACAATACTCAACATGCGGCATTTACAATTACCATAACCCTTGGTCACAACACCAAGCTCATCAAAGAGGACTCACGCCTCCCCATCATACTCATTTGGGAATTAGGTTCATTA</gDNA_template>
            <first_frame> V  V  A  L  V  L  T  I  C  E  I  E  *  R  W  S  D  T  N  L  Y  H  L  D  T  N  W  T  Q  V  I  A  R  K  K  E  R  R  M  E  F  S  *  S  L  I  A  S  Q  R  K  V  K  A  S  P  Y  R  S  L  R  L  Y  *  T  R  S  C  V  M  R  P  T  N  L  M  L  *  Y  Q  V  C  H  D  P  N  R  V  A  T  G  T  H  T  Y  P  P  M  *  A  N  Q  P  I  *  T  L  T  F  Q  C  N  I  N  I  K  *  C  G  R  L  K  L  I  N  K  I  N  N  Y  Y   : Y  S  T  S  I  I  P  K  T  R  K  S  S  S  Q  E  H  L  L  *  T  T  N  S  K  S  F  *  E  A  K  N  T  *  E  A  S  P  C  R  K  F  K  A  S  R  H  E  G  E  D  P  V  Q  A  R  S  V  S  S  P  *  R  S  G  V  T  K  I  G  L  S  Y  C  *  V  E  D  D  G  T  F  A  A  L  H  K  *  Q  E  G  K  T  *  K  *  G  S  V  Q  N  T  G  T  E  *  I  S  S  A  N  S  K  *  R  T  V  Y  I  K :   *  Y  H  K  I  N  Y  N  T  Q  H  A  A  F  T  I  T  I  T  L  G  H  N  T  K  L  I  K  E  D  S  R  L  P  I  I  L  I  W  E  L  G  S  L </first_frame>
            <second_frame>  L  L  L  *  F  *  P  S  A  K  *  S  E  D  G  Q  I  P  I  C  I  T  *  I  P  I  G  P  K  *  *  H  E  R  K  K  E  E  W  N  F  P  K  V  L  *  P  L  K  E  K  *  R  H  P  P  T  V  P  *  D  S  T  R  L  V  L  V  *  *  D  Q  R  T  *  C  S  D  T  K  F  V  T  T  Q  I  G  S  R  L  A  P  T  L  T  L  L  C  E  R  T  N  Q  S  K  P  *  H  F  N  V  I  S  T  *  S  N  A  E  D  L  N  S  *  I  K  S  I  T  I  I  :  I  Q  H  L  L  F  P  K  P  G  S  H  H  H  K  N  I  Y  F  K  L  L  I  L  R  V  S  K  K  L  K  I  H  K  K  L  V  H  A  G  S  S  R  H  Q  D  M  K  E  K  I  Q  S  K  L  E  A  L  A  H  P  E  D  P  V  *  R  R  L  A  *  V  T  V  E  S  K  M  T  A  R  L  L  H  S  T  N  N  K  K  E  K  H  K  S  R  G  Q  Y  K  T  R  V  L  S  R  Y  H  R  P  T  Q  N  R  E  Q  Y  I  S   : N  N  I  I  K  S  T  T  I  L  N  M  R  H  L  Q  L  P  *  P  L  V  T  T  P  S  S  S  K  R  T  H  A  S  P  S  Y  S  F  G  N  *  V  H   </second_frame>
            <third_frame>   C  C  S  S  S  N  H  L  R  N  R  V  K  M  V  R  Y  Q  F  V  S  P  R  Y  Q  L  D  P  S  N  S  T  K  E  R  K  K  N  G  I  F  L  K  S  Y  S  L  S  K  K  S  K  G  I  P  L  P  F  L  K  T  L  L  D  S  F  L  C  D  E  T  N  E  P  N  A  L  I  P  S  L  S  R  P  K  S  G  R  D  W  H  P  H  L  P  S  Y  V  S  E  P  T  N  L  N  L  N  I  S  M  *  Y  Q  H  K  V  M  R  K  T  *  T  H  K  *  N  Q  *  L  L  L :   F  N  I  Y  Y  S  Q  N  P  E  V  I  I  T  R  T  S  T  L  N  Y  *  F  *  E  F  L  R  S  *  K  Y  I  R  S  *  S  M  P  E  V  Q  G  I  K  T  *  R  R  R  S  S  P  S  *  K  R  *  L  T  L  K  I  R  C  D  E  D  W  L  E  L  L  L  S  R  R  *  R  H  V  C  C  T  P  Q  I  T  R  R  K  N  I  K  V  G  V  S  T  K  H  G  Y  *  V  D  I  I  G  Q  L  K  I  E  N  S  I  Y  Q  :  I  I  S  *  N  Q  L  Q  Y  S  T  C  G  I  Y  N  Y  H  N  P  W  S  Q  H  Q  A  H  Q  R  G  L  T  P  P  H  H  T  H  L  G  I  R  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21719" stop="22051"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCSSSNHLRNRVKMVRYQFVSPRYQLDPSNSTKERKKNGIFLKSYSLSKKSKGIPLPFLKTLLDSFLCDETNEPNALIPSLSRPKSGRDWHPHLPSYVSEPTNLNLNISM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22090" stop="22110"/>
                    <exon start="41559" stop="41756"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKSITIIIQHLLFPKPGSHHHKNIYFKLLILRVSKKLKIHKKLVHAGSSRHQDMKEKIQSKLEALAHPEDPV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="5" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41772" stop="41916"/>
                    <exon start="45715" stop="45770"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTVESKMTARLLHSTNNKKEKHKSRGQYKTRVLSRYHRPTQNREQYISNNIIKSTTILNMRHLQLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="12240" e_stop="12651"/>
            <exon e_start="15145" e_stop="15935"/>
            <exon e_start="22852" e_stop="23259"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.876"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.934"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.876">
            <gDNA_exon_boundary e_start="12240" e_stop="12651" e_length="412"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12652" i_stop="15144" i_length="2493"/>
          </intron>
          <exon e_serial="2" e_score="0.934">
            <gDNA_exon_boundary e_start="15145" e_stop="15935" e_length="791"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15936" i_stop="22851" i_length="6916"/>
          </intron>
          <exon e_serial="3" e_score="0.919">
            <gDNA_exon_boundary e_start="22852" e_stop="23259" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12240" stop="12651"/>
              <exon start="15145" stop="15935"/>
              <exon start="22852" stop="23259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315285" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGGTGTTGGCGCAGTTGTTGTTCTAGTTCTAACCATCTACGAAATAGAGTGAAGATGGTCAGATATCAATTTGTATCACCTATATACCAATTGGATCCAAGTAATAGCACGAAAGAAAGAAAGAATGGAATTTTCCTAAAGTCCTGTAGACTCTCAAAGAAAAGTAAAGGTGTCCCCCTACCGTTCCTCAAGACTCTACTAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAAGGCTATGATACCAAGTTTGTCACGACCCAAAACGAGCCGCGAGTGGCACCCATACTTATCCTACTATGTGAGCGAACCAACCAATCTAAACCCCAACATTTCAACCATAAGATACAGAATATAATGCGGAAGACTTAAAACTCATTAATAAACATCGATTAAATAACTTCTAA : AATTCAATAACTATTATTTCCCAAAATCTGGAAGTCATCATCACAAGAACATCTACTTCAAATTACTAAATCTAAGAGTTTCTAAGAAGCTAAAAATACATAAAAGCTAGTCCATGCCGGAACTTCAAGGCATCAAGACATGAAGAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGATATCCGGAGTAATGAAGACTGGCTAGAATTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACCAAACACGGGTACTGAGTAGATATCATTGGCCAACTCAAAATAGAGATCAATATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACAATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTCATTACATTGAGTATATTACCATCTTTAAAGATTCATTATCTTTATTTCTCTTGTGTCGGCACGTGACACTCCACTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTACTACTATGTGTCGGAACGTGACACTCCTATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTA : ATCTACGTGTCGGTTCATGACACTCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAAATCTACGTGTCAGTTCGTGACACCCGATCCCCTAATCTTCTTCTATCAACTCATCAAGCCTTCTTTCTTACCAAGACATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATCATTAACAAAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCACATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAACAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGACTA</gDNA_template>
            <first_frame> C  W  C  W  R  S  C  C  S  S  S  N  H  L  R  N  R  V  K  M  V  R  Y  Q  F  V  S  P  I  Y  Q  L  D  P  S  N  S  T  K  E  R  K  N  G  I  F  L  K  S  C  R  L  S  K  K  S  K  G  V  P  L  P  F  L  K  T  L  L  D  S  F  L  C  D  E  T  N  E  P  K  A  M  I  P  S  L  S  R  P  K  T  S  R  E  W  H  P  Y  L  S  Y  Y  V  S  E  P  T  N  L  N  P  N  I  S  T  I  R  Y  R  I  *  C  G  R  L  K  T  H  *  *  T  S  I  K  *  L  L   : K  F  N  N  Y  Y  F  P  K  S  G  S  H  H  H  K  N  I  Y  F  K  L  L  N  L  R  V  S  K  K  L  K  I  H  K  S  *  S  M  P  E  L  Q  G  I  K  T  *  R  G  R  S  S  P  S  *  K  H  *  L  T  L  I  S  G  V  M  K  T  G  *  N  Y  C  *  V  E  D  D  G  T  F  A  A  L  H  K  *  T  R  R  K  H  K  S  R  G  Q  Y  Q  T  R  V  L  S  R  Y  H  W  P  T  Q  N  R  D  Q  Y  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  N  K  Y  N  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  Q  Y  H  T  H  L  G  I  M  F  I  T  L  S  I  L  P  S  L  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  T  P  S  Y  S  L  I  L  L  C  R  Y  V  T  L  *  S  P  T  T  M  C  R  N  V  T  L  L  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  *  H  P  I  P  *  I  Y  V  S  V  C  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  :  I  Y  V  S  V  H  D  T  R  S  P  K  S  T  C  Q  F  V  T  P  D  P  L  N  L  R  V  S  S  *  H  P  I  P  *  S  S  S  I  N  S  S  S  L  L  S  Y  Q  D  I  I  N  L  I  I  L  V  H  H  A  F  F  Y  T  K  A  S  S  L  T  K  R  L  G  F  C  K  I  W  D  S  I  T  S  S  C  L  Y  N  H  I  I  *  L  H  S  C  K  H  T  I  K  H  I  T  G  F  T  I  L  S  I  H  I  I  R  Y  *  E  F  T  T  N  I  V  R  E  T  I  T  Y  L  H  R  R  L </first_frame>
            <second_frame>  V  G  V  G  A  V  V  V  L  V  L  T  I  Y  E  I  E  *  R  W  S  D  I  N  L  Y  H  L  Y  T  N  W  I  Q  V  I  A  R  K  K  E  R  M  E  F  S  *  S  P  V  D  S  Q  R  K  V  K  V  S  P  Y  R  S  S  R  L  Y  *  T  R  S  C  V  M  R  P  T  N  L  R  L  *  Y  Q  V  C  H  D  P  K  R  A  A  S  G  T  H  T  Y  P  T  M  *  A  N  Q  P  I  *  T  P  T  F  Q  P  *  D  T  E  Y  N  A  E  D  L  K  L  I  N  K  H  R  L  N  N  F  *  :  N  S  I  T  I  I  S  Q  N  L  E  V  I  I  T  R  T  S  T  S  N  Y  *  I  *  E  F  L  R  S  *  K  Y  I  K  A  S  P  C  R  N  F  K  A  S  R  H  E  E  E  D  P  V  Q  A  R  S  I  S  S  P  *  Y  P  E  *  *  R  L  A  R  I  T  V  E  S  K  M  T  A  R  L  L  H  S  T  N  K  Q  E  E  N  I  K  V  G  V  S  T  K  H  G  Y  *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  T  I  L  I  W  E  L  C  S  L  H  *  V  Y  Y  H  L  *  R  F  I  I  F  I  S  L  V  S  A  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  L  L  C  V  G  T  *  H  S  Y  P  L  N  L  R  V  G  S  *  H  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  *  H  P  I  P  * :   S  T  C  R  F  M  T  L  D  P  L  N  L  R  V  S  S  *  H  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  P  N  L  L  L  S  T  H  Q  A  F  F  L  T  K  T  S  S  I  S  L  F  *  F  I  T  P  S  F  I  P  R  P  H  H  *  Q  R  D  *  G  F  A  R  F  G  I  Q  *  L  H  H  A  Y  I  I  T  L  Y  N  Y  I  H  A  S  I  Q  L  S  T  *  Q  G  L  Q  Y  Y  Q  Y  I  S  F  A  I  K  S  L  L  R  I  S  *  E  K  P  *  P  T  S  T  E  D   </second_frame>
            <third_frame>   L  V  L  A  Q  L  L  F  *  F  *  P  S  T  K  *  S  E  D  G  Q  I  S  I  C  I  T  Y  I  P  I  G  S  K  *  *  H  E  R  K  K  E  W  N  F  P  K  V  L  *  T  L  K  E  K  *  R  C  P  P  T  V  P  Q  D  S  T  R  L  V  L  V  *  *  D  Q  R  T  *  G  Y  D  T  K  F  V  T  T  Q  N  E  P  R  V  A  P  I  L  I  L  L  C  E  R  T  N  Q  S  K  P  Q  H  F  N  H  K  I  Q  N  I  M  R  K  T  *  N  S  L  I  N  I  D  *  I  T  S  K :   I  Q  *  L  L  F  P  K  I  W  K  S  S  S  Q  E  H  L  L  Q  I  T  K  S  K  S  F  *  E  A  K  N  T  *  K  L  V  H  A  G  T  S  R  H  Q  D  M  K  R  K  I  Q  S  K  L  E  A  L  A  H  P  D  I  R  S  N  E  D  W  L  E  L  L  L  S  R  R  *  R  H  V  C  C  T  P  Q  I  N  K  K  K  T  *  K  *  G  S  V  P  N  T  G  T  E  *  I  S  L  A  N  S  K  *  R  S  I  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  Q  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  Y  V  H  Y  I  E  Y  I  T  I  F  K  D  S  L  S  L  F  L  L  C  R  H  V  T  L  H  S  L  I  F  I  N  P  L  V  S  V  R  D  T  L  I  P  Y  Y  Y  V  S  E  R  D  T  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  L  *  H  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  P   : N  L  R  V  G  S  *  H  S  I  P  *  I  Y  V  S  V  R  D  T  R  S  P  K  S  T  C  Q  F  V  T  P  D  P  L  I  F  F  Y  Q  L  I  K  P  S  F  L  P  R  H  H  Q  S  H  Y  F  S  S  S  R  L  L  L  Y  Q  G  L  I  I  N  K  E  I  R  V  L  Q  D  L  G  F  N  N  F  I  M  L  I  *  S  H  Y  I  I  T  F  M  Q  A  Y  N  *  A  H  N  R  V  Y  N  I  I  N  T  Y  H  S  L  L  R  V  Y  Y  E  Y  R  K  R  N  H  N  L  P  P  P  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12240" stop="12602"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CWCWRSCCSSSNHLRNRVKMVRYQFVSPIYQLDPSNSTKERKNGIFLKSCRLSKKSKGVPLPFLKTLLDSFLCDETNEPKAMIPSLSRPKTSREWHPYLSYYVSEPTNLNPNISTIRYRI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15566" stop="15796"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLPSSSHMRTQASIPYSFGNYVHYIEYITIFKDSLSLFLLCRHVTLHSLIFINPLVSVRDTLIPYYYVSERDTPIP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="6" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22887" stop="23117"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYVSVRDTRSPKSTCQFVTPDPLIFFYQLIKPSFLPRHHQSHYFSSSRLLLYQGLIINKEIRVLQDLGFNNFIMLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="20980" PGL_stop="19537"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20980" e_stop="20808"/>
            <exon e_start="20063" e_stop="19537"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.954"/>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="20980" e_stop="20808" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20807" i_stop="20064" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.915">
            <gDNA_exon_boundary e_start="20063" e_stop="19537" e_length="527"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20980" stop="20808"/>
              <exon start="20063" stop="19537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCAGCCTTACAAGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCTGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCTTATAGAATGGCTCCCACGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTCGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGTATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  Q  I  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  I  A  D  F  S  L  T  S  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  G  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  A  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  S  *  T  G  Y  S  P  H  F  Y  T  P  Y  R  M  A  P  T  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  L  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  L  I  E  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  S  *  R  R  R  M  G  V  F  G  C  V  *  T  T </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  P  D  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  R  G  *  G  Q  N  C  G  F  Q  P  Y  K  *  R  L  R  Q  N  P  S  K  :  K  W  L  I  L  M  *  F  W  V  *  L  G  F  L  C  N  L  R  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  C  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  *  N  G  S  H  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  G  F  V  R  K  E  E  G  W  E  F  S  D  V  Y  R  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20979" stop="20808"/>
                    <exon start="20063" stop="19666"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVKGLRSELRISALQVAATAKSFQEMVDFDVILGMTWLSLQFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVRIISFLRAKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPLIEWLPRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="21607" PGL_stop="21054"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21607" e_stop="21054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="21607" e_stop="21054" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21607" stop="21054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAAGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAACTGAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAGGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGATTTTAGAGGTACAACATGCAGCCACTATGTCTCCTCGTATGGATGCCTCATTGGACATGGGCACGTTTTCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGATACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAATGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  S  D  S  S  T  D  *  R  S  S  K  R  G  *  G  R  G  N  *  T  S  A  K  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  G  S  G  T  S  S  V  F  C  T  N  T  S  D  F  R  G  T  T  C  S  H  Y  V  S  S  Y  G  C  L  I  G  H  G  H  V  F  T  S  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  *  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  R  F  S  G  *  L  S  *  D  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  C  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  L  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  V  R  E  G  E  E  G  E  T  E  Q  V  Q  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  P  P  V  F  S  A  P  T  P  P  I  L  E  V  Q  H  A  A  T  M  S  P  R  M  D  A  S  L  D  M  G  T  F  S  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  I  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  Q  *  L  L  H  R  L  K  K  *  *  E  R  V  R  K  G  K  L  N  K  C  K  M  R  N  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  R  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  *  R  Y  N  M  Q  P  L  C  L  L  V  W  M  P  H  W  T  W  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  M  N  F  L  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  L  T  I  F  W  L  T  V  M  R  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  M  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21606" stop="21055"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSPSDTRAVTPPPTEEVVREGEEGETEQVQNEELPPQPTPEMINQVLAYLSGLSDQGQAPPVFSAPTPPILEVQHAATMSPRMDASLDMGTFSRLTTGPIMTNDQHELFSKFLKLKPPVFKGAESEDAYDFLVDCHEILHKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="39361" PGL_stop="38976"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39361" e_stop="38976"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="39361" e_stop="38976" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39361" stop="38976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330306" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGAACCACAATAGCAATTTTTGCCCTTTTCATTGTTTTATCATCACTTTGCTTCAACCCAATTAATAGCTCAAGGGATATTTCTTTTGATAATCCATTAACACAGAGAAACCTCTTATCCCAAAAGACAAGTGATATTCATCCTGATGTTGCTGCCAATTGTAGAATTTGTATGGAACAATGTGGATCTTGTACTTGTTGCATTGCAAAATTGAAGCATTAATTAATATTACTTATGTTGTAAAACTATATTGTTGTTTGTATTGTTTCTAGTACGACTTTTTTTATTATTGTATTTGAATTTAATATGTTTTATGTGAGCGGAGAGTCTATCAGAAATAACTTCTCTATCTTCACAAGATAGAAGTAAGATTAAATACACAAA</gDNA_template>
            <first_frame> Q  E  P  Q  *  Q  F  L  P  F  S  L  F  Y  H  H  F  A  S  T  Q  L  I  A  Q  G  I  F  L  L  I  I  H  *  H  R  E  T  S  Y  P  K  R  Q  V  I  F  I  L  M  L  L  P  I  V  E  F  V  W  N  N  V  D  L  V  L  V  A  L  Q  N  *  S  I  N  *  Y  Y  L  C  C  K  T  I  L  L  F  V  L  F  L  V  R  L  F  L  L  L  Y  L  N  L  I  C  F  M  *  A  E  S  L  S  E  I  T  S  L  S  S  Q  D  R  S  K  I  K  Y  T   </first_frame>
            <second_frame>  K  N  H  N  S  N  F  C  P  F  H  C  F  I  I  T  L  L  Q  P  N  *  *  L  K  G  Y  F  F  *  *  S  I  N  T  E  K  P  L  I  P  K  D  K  *  Y  S  S  *  C  C  C  Q  L  *  N  L  Y  G  T  M  W  I  L  Y  L  L  H  C  K  I  E  A  L  I  N  I  T  Y  V  V  K  L  Y  C  C  L  Y  C  F  *  Y  D  F  F  Y  Y  C  I  *  I  *  Y  V  L  C  E  R  R  V  Y  Q  K  *  L  L  Y  L  H  K  I  E  V  R  L  N  T  Q  </second_frame>
            <third_frame>   R  T  T  I  A  I  F  A  L  F  I  V  L  S  S  L  C  F  N  P  I  N  S  S  R  D  I  S  F  D  N  P  L  T  Q  R  N  L  L  S  Q  K  T  S  D  I  H  P  D  V  A  A  N  C  R  I  C  M  E  Q  C  G  S  C  T  C  C  I  A  K  L  K  H  *  L  I  L  L  M  L  *  N  Y  I  V  V  C  I  V  S  S  T  T  F  F  I  I  V  F  E  F  N  M  F  Y  V  S  G  E  S  I  R  N  N  F  S  I  F  T  R  *  K  *  D  *  I  H  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39359" stop="39138"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTTIAIFALFIVLSSLCFNPINSSRDISFDNPLTQRNLLSQKTSDIHPDVAANCRICMEQCGSCTCCIAKLKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="80302" PGL_stop="77663"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80302" e_stop="77663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="80302" e_stop="77663" e_length="2640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80302" stop="79590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79782" stop="79124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79713" stop="78956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79103" stop="78545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79099" stop="77663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGCCTCAATCTTAGAAGGATCTACCATCACCTCATCCTTCGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTGGAGAATTTGGCATAAAGCCTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGTTCTTCATGTTCCTCCTTACTTTTAAAGTATATCAGTATATCATCAATAAATACGATCACAAATAGATCCAGATATGGCTTAAAAATCCTGTTCATCAAGCTCATGAAAGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCATAATGGCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCCCAGGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGGTACTTGTTCTTTATGGTTACCTTGTTCAACTGCTGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCTTTTGTTCAACAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCCGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGAAAAAAGCCAAGTCATACCCATAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAGGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATGAAGTAATTCACAATGTAAATTTAGACCATTACCAAATGAGGAAGATACATAAGAAATTGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCTACTTCAGATCTCCAAGGGAAAGCGTAGCAATGGGCCCTCTCACCCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTACAGGTTGCCCATCACCTCGGCCGTTCTGGTGGCCACCATTACCTCGGCCACCATATTTTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGATAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTAGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAACTGCGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCCCTTTGATGTCGATGCCATGGTGAATTCATATGGCTTCACTCCTTCCACCTCTACCACAAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGGAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAACGTCCGGGGGATATACTTCTCCATAAACAAGTTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCCGTTGGTTGACACTCAATATGCGACCGCCACCACATTTTGGTGTTCCCTTGAAACTGATAAGTCACAAATTCCACACAAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAAAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGCACTTCTGAAACTGGAGATGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATTAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGACAATCGCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  Y  H  H  L  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  G  E  F  G  I  K  P  F  L  P  Q  H  F  Q  Y  H  S  Q  M  F  F  M  F  L  L  T  F  K  V  Y  Q  Y  I  I  N  K  Y  D  H  K  *  I  Q  I  W  L  K  N  P  V  H  Q  A  H  E  S  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  I  M  A  I  P  G  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  V  L  V  L  Y  G  Y  L  V  Q  L  L  V  V  Y  A  H  P  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  G  C  T  W  S  N  E  A  F  V  Q  Q  L  L  K  L  C  L  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  V  N  T  E  I  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  P  K  L  T  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  K  K  P  S  H  T  H  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  K  V  H  Q  T  G  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  M  K  *  F  T  M  *  I  *  T  I  T  K  *  G  R  Y  I  R  N  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  Y  F  R  S  P  R  E  S  V  A  M  G  P  L  T  R  L  S  V  A  P  T  M  L  *  C  S  G  Y  R  L  P  I  T  S  A  V  L  V  A  T  I  T  S  A  T  I  F  S  R  I  T  A  S  T  M  T  T  S  T  S  N  I  W  R  S  V  T  L  F  W  I  I  S  L  N  M  S  N  L  P  T  S  I  A  L  S  R  F  M  H  R  S  L  R  E  V  L  T  G  R  R  W  T  P  N  Y  S  L  *  *  R  L  N  G  S  N  C  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  K  I  Y  H  F  L  E  G  F  C  R  S  R  Y  L  *  G  *  N  P  Q  L  *  P  Q  P  L  H  K  M  T  N  P  L  L  W  T  E  T  K  L  G  G  I  S  G  *  C  T  E  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  R  P  G  D  I  L  L  H  K  Q  V  R  E  *  G  P  S  H  R  W  C  L  R  W  L  T  L  N  M  R  P  P  P  H  F  G  V  P  L  K  L  I  S  H  K  F  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  V  N  Q  K  I  I  S  I  L  R  F  S  T  L  E  D  R  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  C  A  Y  V  Q  *  G  I  H  T  R  S  H  S  G  C  M  L  H  F  *  N  W  R  C  W  R  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  E  I  G  E  N  L  I  D  H  L  W  G  R  L  G  *  Q  S  L  I  L  H  L  F  I  F  P  I  L  P  F  S  Y  Y  F  L  S  R  W  R  S  H  C  P  S  I  R  W  A </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  A  S  I  L  E  G  S  T  I  T  S  S  F  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  L  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  S  L  L  L  K  Y  I  S  I  S  S  I  N  T  I  T  N  R  S  R  Y  G  L  K  I  L  F  I  K  L  M  K  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  W  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  P  R  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  W  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  L  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  E  K  S  Q  V  I  P  I  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  *  S  N  S  Q  C  K  F  R  P  L  P  N  E  E  D  T  *  E  I  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  T  S  D  L  Q  G  K  A  *  Q  W  A  L  S  P  V  C  P  L  P  L  P  C  C  D  V  V  A  T  G  C  P  S  P  R  P  F  W  W  P  P  L  P  R  P  P  Y  F  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  G  *  Y  L  L  I  C  P  I  S  P  H  P  *  H  S  L  G  S  C  I  G  L  S  E  K  C  *  P  V  G  G  G  P  P  T  T  V  C  S  E  D  *  M  G  R  T  A  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  P  F  D  V  D  A  M  V  N  S  Y  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  *  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  N  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  I  C  D  R  H  H  I  L  V  F  P  *  N  *  *  V  T  N  S  T  Q  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  K  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  R  G  N  V  P  M  S  N  E  A  S  I  R  G  A  I  V  A  A  C  C  T  S  E  T  G  D  V  G  A  E  N  T  G  G  A  *  P  *  L  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  D  N  R  S  F  C  T  C  S  F  S  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G   </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  P  Q  S  *  K  D  L  P  S  P  H  P  S  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  W  R  I  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  V  L  H  V  P  P  Y  F  *  S  I  S  V  Y  H  Q  *  I  R  S  Q  I  D  P  D  M  A  *  K  S  C  S  S  S  S  *  K  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  H  N  G  H  T  W  F  *  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  P  G  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  G  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  S  Q  T  K  P  E  H  P  K  G  M  H  L  V  *  *  S  F  C  S  T  T  L  E  V  V  P  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  G  Q  Y  R  N  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  K  K  A  K  S  Y  P  *  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  S  P  N  R  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  E  V  I  H  N  V  N  L  D  H  Y  Q  M  R  K  I  H  K  K  L  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  L  L  Q  I  S  K  G  K  R  S  N  G  P  S  H  P  S  V  R  C  P  Y  H  V  V  M  *  W  L  Q  V  A  H  H  L  G  R  S  G  G  H  H  Y  L  G  H  H  I  F  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  H  L  E  V  C  N  S  V  L  D  N  I  S  *  Y  V  Q  S  P  H  I  H  S  T  L  *  V  H  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  W  V  E  L  R  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  E  T  P  L  M  S  M  P  W  *  I  H  M  A  S  L  L  P  P  L  P  Q  N  L  P  L  L  G  R  I  L  P  *  P  L  P  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  I  W  I  V  H  G  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  T  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  P  L  V  D  T  Q  Y  A  T  A  T  T  F  W  C  S  L  E  T  D  K  S  Q  I  P  H  K  T  V  L  L  Y  P  S  C  V  V  A  R  D  S  Q  P  K  N  H  K  H  P  P  I  Q  H  P  *  R  P  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  C  P  M  R  H  P  Y  E  E  P  *  W  L  H  V  A  L  L  K  L  E  M  L  A  Q  K  T  L  E  V  P  D  L  D  *  T  T  H  *  D  R  R  E  P  D  *  S  S  L  G  *  V  G  V  T  I  A  H  S  A  L  V  H  F  P  H  P  P  L  L  L  L  L  P  Q  S  V  E  E  S  L  P  *  Y  Q  M  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78871" stop="78617"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGYRLPITSAVLVATITSATIFSRITASTMTTSTSNIWRSVTLFWIISLNMSNLPTSIALSRFMHRSLREVLTGRRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79575" stop="79330"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78381" stop="78172"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIRSCGLKQSWVAYLDSARNLASYALTDILPCSRLKNSSLFLSLNVRGIYFSINKLENEAQVIGGASVG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79999" stop="79799"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IQIWLKNPVHQAHESSRGIRKTKRHHYKFIMAIPGSKSSLWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79597" stop="79397"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRGSHSIRGYRNGASTRFKVNTEINIPIWWHTRKICREHIPKLTDHRNRLNRRYLGSVILEMCQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80106" stop="79909"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFSLNISNTILKCSSCSSLLLKYISISSINTITNRSRYGLKILFIKLMKAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="78286" PGL_stop="79730"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78286" e_stop="78458"/>
            <exon e_start="79203" e_stop="79730"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.954"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="78286" e_stop="78458" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="78459" i_stop="79202" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="79203" e_stop="79730" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78286" stop="78458"/>
              <exon start="79203" stop="79730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTCCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCATTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTATGGGTATGACTTGGCTTTTTTCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCGGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTGTTGAACAAAAGCTTCATTAGACCAAGTGCATCCCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  P  C  T  I  Q  I  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  Y  G  Y  D  L  A  F  F  A  I  C  D  L  G  L  *  C  *  N  G  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  A  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  F  L  Y  *  P  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  G  T  T  S  R  V  V  E  Q  K  L  H  *  T  K  C  I  P  L  G  C  S  G  F  V  C  E  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  H  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  M  G  M  T  W  L  F  S  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  R  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  S  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  S  V  H  Y  P  D  M  P  P  N  F  V  S  V  H  K  S  G  F  V  I  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  L  W  V  *  L  G  F  F  R  N  L  R  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  C  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  G  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  I  S  V  L  T  L  N  R  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  R  H  N  F  K  S  C  *  T  K  A  S  L  D  Q  V  H  P  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78287" stop="78458"/>
                    <exon start="79203" stop="79729"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRHFVKGLRSELRISALQVAATAKSFQEMDDFDVIMGMTWLFSQFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVRIISFLRAKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVREFRDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQELLNKSFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="95995" PGL_stop="98490"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95995" e_stop="96440"/>
            <exon e_start="98362" e_stop="98490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.721" acc_prob="0.963" e_score="0.964"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="95995" e_stop="96440" e_length="446"/>
          </exon>
          <intron i_serial="1" don_prob="0.721" acc_prob="0.963">
            <gDNA_intron_boundary i_start="96441" i_stop="98361" i_length="1921"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98362" e_stop="98490" e_length="129"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95995" stop="96440"/>
              <exon start="98362" stop="98490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340455" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGGCCGGTGCCTCCCTTCTTCATCTGTCAAAGACTCAATTTTTTTCAACATTTCAATATCTTCTTCTTCATAGTTTCTCTCTCTACACCTCTGTCTCCATAAAAATATATAAATTTGTCTGAATTTTCTTCTTTTTTTTGTTCTTGATTTTCGTATATATATACTGTCTCTCTGTATATCTGCAAAAAAAAAAAGAATATCAAAAAAATAATTAGTACGGTACAATCATTTTCCAGGCAAAGGGAGAAAAGGGGAGGTCCAAAATATACAATCTTGGAACCCCATTACTTCAATTATTCACTTCCTTTTTGGTGTACCACTTTTTCATATTTCGCCAGCTTTGCATAACCCCTTTTTCTTCTGTGTTTTGAATACCCTTTTGGTTTATCTTCTCTGTGGAGGGAGAGTTTTTGCTGCATAGATCTCTCTGTAGAGGAGGAATAG : TTGGTTTTGTCAGAATATTGAGATAGCTGTGGTTAGAAACTTCAGCATTCCAGTTTCCTTTGTTGAAAGAAGTGGTAACAAGGAGGACTTTGCACAATGTCTGGCTCTGTGAAAACTTTGGATCCTGCA</gDNA_template>
            <first_frame> N  G  R  C  L  P  S  S  S  V  K  D  S  I  F  F  N  I  S  I  S  S  S  S  *  F  L  S  L  H  L  C  L  H  K  N  I  *  I  C  L  N  F  L  L  F  F  V  L  D  F  R  I  Y  I  L  S  L  C  I  S  A  K  K  K  R  I  S  K  K  *  L  V  R  Y  N  H  F  P  G  K  G  R  K  G  E  V  Q  N  I  Q  S  W  N  P  I  T  S  I  I  H  F  L  F  G  V  P  L  F  H  I  S  P  A  L  H  N  P  F  F  F  C  V  L  N  T  L  L  V  Y  L  L  C  G  G  R  V  F  A  A  *  I  S  L  *  R  R  N  S :   W  F  C  Q  N  I  E  I  A  V  V  R  N  F  S  I  P  V  S  F  V  E  R  S  G  N  K  E  D  F  A  Q  C  L  A  L  *  K  L  W  I  L   </first_frame>
            <second_frame>  M  A  G  A  S  L  L  H  L  S  K  T  Q  F  F  S  T  F  Q  Y  L  L  L  H  S  F  S  L  Y  T  S  V  S  I  K  I  Y  K  F  V  *  I  F  F  F  F  L  F  L  I  F  V  Y  I  Y  C  L  S  V  Y  L  Q  K  K  K  E  Y  Q  K  N  N  *  Y  G  T  I  I  F  Q  A  K  G  E  K  G  R  S  K  I  Y  N  L  G  T  P  L  L  Q  L  F  T  S  F  L  V  Y  H  F  F  I  F  R  Q  L  C  I  T  P  F  S  S  V  F  *  I  P  F  W  F  I  F  S  V  E  G  E  F  L  L  H  R  S  L  C  R  G  G  I   : V  G  F  V  R  I  L  R  *  L  W  L  E  T  S  A  F  Q  F  P  L  L  K  E  V  V  T  R  R  T  L  H  N  V  W  L  C  E  N  F  G  S  C  </second_frame>
            <third_frame>   W  P  V  P  P  F  F  I  C  Q  R  L  N  F  F  Q  H  F  N  I  F  F  F  I  V  S  L  S  T  P  L  S  P  *  K  Y  I  N  L  S  E  F  S  S  F  F  C  S  *  F  S  Y  I  Y  T  V  S  L  Y  I  C  K  K  K  K  N  I  K  K  I  I  S  T  V  Q  S  F  S  R  Q  R  E  K  R  G  G  P  K  Y  T  I  L  E  P  H  Y  F  N  Y  S  L  P  F  W  C  T  T  F  S  Y  F  A  S  F  A  *  P  L  F  L  L  C  F  E  Y  P  F  G  L  S  S  L  W  R  E  S  F  C  C  I  D  L  S  V  E  E  E  *  :  L  V  L  S  E  Y  *  D  S  C  G  *  K  L  Q  H  S  S  F  L  C  *  K  K  W  *  Q  G  G  L  C  T  M  S  G  S  V  K  T  L  D  P  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96208" stop="96417"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVRYNHFPGKGRKGEVQNIQSWNPITSIIHFLFGVPLFHISPALHNPFFFCVLNTLLVYLLCGGRVFAA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96144" stop="96344"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSYIYTVSLYICKKKKNIKKIISTVQSFSRQREKRGGPKYTILEPHYFNYSLPFWCTTFSYFASFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="99365" PGL_stop="110357"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99365" e_stop="99539"/>
            <exon e_start="100412" e_stop="100544"/>
            <exon e_start="102351" e_stop="102510"/>
            <exon e_start="102584" e_stop="102731"/>
            <exon e_start="102805" e_stop="102905"/>
            <exon e_start="102992" e_stop="103150"/>
            <exon e_start="103805" e_stop="103873"/>
            <exon e_start="103948" e_stop="104016"/>
            <exon e_start="104108" e_stop="104245"/>
            <exon e_start="105008" e_stop="105136"/>
            <exon e_start="106341" e_stop="106488"/>
            <exon e_start="106586" e_stop="106596"/>
            <exon e_start="106688" e_stop="106828"/>
            <exon e_start="106912" e_stop="107037"/>
            <exon e_start="107637" e_stop="107699"/>
            <exon e_start="108263" e_stop="108557"/>
            <exon e_start="108847" e_stop="109049"/>
            <exon e_start="109528" e_stop="110357"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.152" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.878" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.866" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.746" acc_prob="0.769" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.401" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.125" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.907" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="99365" e_stop="99539" e_length="175"/>
          </exon>
          <intron i_serial="1" don_prob="0.152" acc_prob="0.959">
            <gDNA_intron_boundary i_start="99540" i_stop="100411" i_length="872"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100412" e_stop="100544" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.878">
            <gDNA_intron_boundary i_start="100545" i_stop="102350" i_length="1806"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102351" e_stop="102510" e_length="160"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.987">
            <gDNA_intron_boundary i_start="102511" i_stop="102583" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="102584" e_stop="102731" e_length="148"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.866">
            <gDNA_intron_boundary i_start="102732" i_stop="102804" i_length="73"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="102805" e_stop="102905" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="102906" i_stop="102991" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="102992" e_stop="103150" e_length="159"/>
          </exon>
          <intron i_serial="6" don_prob="0.764" acc_prob="0.989">
            <gDNA_intron_boundary i_start="103151" i_stop="103804" i_length="654"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="103805" e_stop="103873" e_length="69"/>
          </exon>
          <intron i_serial="7" don_prob="0.746" acc_prob="0.769">
            <gDNA_intron_boundary i_start="103874" i_stop="103947" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="103948" e_stop="104016" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.980" acc_prob="0.993">
            <gDNA_intron_boundary i_start="104017" i_stop="104107" i_length="91"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="104108" e_stop="104245" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.987" acc_prob="0.941">
            <gDNA_intron_boundary i_start="104246" i_stop="105007" i_length="762"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="105008" e_stop="105136" e_length="129"/>
          </exon>
          <intron i_serial="10" don_prob="0.910" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105137" i_stop="106340" i_length="1204"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="106341" e_stop="106488" e_length="148"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.401">
            <gDNA_intron_boundary i_start="106489" i_stop="106585" i_length="97"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="106586" e_stop="106596" e_length="11"/>
          </exon>
          <intron i_serial="12" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="106597" i_stop="106687" i_length="91"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="106688" e_stop="106828" e_length="141"/>
          </exon>
          <intron i_serial="13" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="106829" i_stop="106911" i_length="83"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="106912" e_stop="107037" e_length="126"/>
          </exon>
          <intron i_serial="14" don_prob="0.923" acc_prob="0.989">
            <gDNA_intron_boundary i_start="107038" i_stop="107636" i_length="599"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="107637" e_stop="107699" e_length="63"/>
          </exon>
          <intron i_serial="15" don_prob="0.994" acc_prob="0.723">
            <gDNA_intron_boundary i_start="107700" i_stop="108262" i_length="563"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="108263" e_stop="108557" e_length="295"/>
          </exon>
          <intron i_serial="16" don_prob="0.982" acc_prob="0.125">
            <gDNA_intron_boundary i_start="108558" i_stop="108846" i_length="289"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="108847" e_stop="109049" e_length="203"/>
          </exon>
          <intron i_serial="17" don_prob="0.998" acc_prob="0.907">
            <gDNA_intron_boundary i_start="109050" i_stop="109527" i_length="478"/>
          </intron>
          <exon e_serial="18" e_score="0.999">
            <gDNA_exon_boundary e_start="109528" e_stop="110357" e_length="830"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99365" stop="99539"/>
              <exon start="100412" stop="100544"/>
              <exon start="102351" stop="102510"/>
              <exon start="102584" stop="102731"/>
              <exon start="102805" stop="102905"/>
              <exon start="102992" stop="103150"/>
              <exon start="103805" stop="103873"/>
              <exon start="103948" stop="104016"/>
              <exon start="104108" stop="104245"/>
              <exon start="105008" stop="105136"/>
              <exon start="106341" stop="106488"/>
              <exon start="106586" stop="106596"/>
              <exon start="106688" stop="106828"/>
              <exon start="106912" stop="107037"/>
              <exon start="107637" stop="107699"/>
              <exon start="108263" stop="108557"/>
              <exon start="108847" stop="109049"/>
              <exon start="109528" stop="110357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312678" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCATTCTCCCGGTCCTCTCTAAATCATGATGATGTGTTCATTCTGGACACTAAAGACAAGATATATCAATTCAATGGTGCAAACTCCAATATCCAAGAAAGGGCCAAAGCATTGGAAGTTATTCAGTTTTTGAAGGAAAAATATCATGAGGGGACGTGTGATGTTGCAATTGTTG : ATGATGGAAATTTGCAAGCTGAGTCTGATTCTGGATCATTCTGGGTTTTGTTTGGTGGATTTGCTCCAATTAGCAAAAAGGTTATTACTGAAGATGATATTGTTCCCGAGAAGACACCTCCTAAACTTAGCAG : CATCACTGATGGTCAAGTCAGTCCTGTAGATGGTGAACTTTCAAAGTCTAGCTTGGAAAACAATAAATGCTATCTTTTGGATTGCGGTGCTGAGGTGTTTGTTTGGATTGGTCGTGTAACTCAACTGGAGGAGAGGAAAGCTGCCATTCAAACTGCAGAG : GAATATCTTGTCTCTGAAAATAGACCCAAGGCAACGCGTGTAACCCGGGTTATTCAAGGTTATGAAACCCATTCATTCAAGTCCAACTTTGACTCTTGGCCATCAGGATCTGCACCTGCCCCTGAAGAGGGAAGAGGAAAAGTAGCAG : CTTTGCTGAAGCAGCAAGGTGCTGGCGTCAAAGGTGCCAGCAAAAGTGCTCCTGTAATTGAGGAAGTGCCTCCGTTGCTTGAAGAGGGTGGAAAATTAGAG : GTATGGCGCATAAATGGTAATGCAAAGACACCTGTCCCAAAAGAAGATATTGGTAAATTCTACAGTGGAGATTGCTATGTGGTTCTCTACAACTACCATTCTCATGAAAGGAGAGACGATTACTATCTATGTTGGTGGATTGGAAAGGATAGTATTGAG : GAGGACCAAATCACGGCTGCTCGATTGGCCAGTACAATGTGCAATTCACTCAAAGGAAGACCTGTGCTG : GGTCGAGTGTTTCAAGGGAAAGAACCTCCACAGTTTGTTGCAATCTTCCAGCCCATGTTGGTCCTTAAG : GGTGGTTTGAGCACTGGCTACAAAAACTATATTGCTGACAAAGGCTTGAATGATGAAACCTATACTGCTGATTCAGTTGCACTTATTCGGTTATCTGGAACTTCTGTGCATAATAACAAAGCGGTTCAAGTGGATGCT : GTGCCAAGTTCACTGAACTCTAATGAGTGTTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAG : CCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAG : GAAAATTTGAG : GTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAG : AAATACGTGGAGATGGCTGCATCTTTGGAAGGATTATCACCAAATGTTCCACTCTATAAAATCACAGAAGGAAATGAACCTTGCTTTTTTACAACATTTTTCTCATGGGATCCTGCAAAAGCCAGT : GCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAG : AATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAAGCTCACCTGTACGATCAAGCAGAAGCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTG : AAAGTGATCTTTCTACTGCTGAGGTCCAAGATTCCGAAAAAGTTTCAGAACCTAAGGAGATTGTTGAGCCTGCTGAAACTAATGGGTCAGAACCAGAGCAGGATGAGGGTGGAAATGAAAGTGGTCAAGCTATATTTAGTTATGAACAGCTGAAGGCTAAATCTGACAACCCTGTCACCGGGATTGATTTTAAGCGAAGAGAG : GCCTATCTATCGGATGAAGAATTTATGTCTGTACTTGGTATGAAGAAAGAAGCATTCTACAAGTTGCCTAAATGGAAACAAGATATGCACAAAAGGAAAACTGATCTCTTCTAGATCCTGCATCGGAGAAACCAAATGGCCTGTTGCTATCTTGTTGTTGCAATTCTCGACATCCGTTCCCATGTTTCTTGCCAGAGCAACCTACTTTTATAGGTACATATTGCCTGGATCGTGTATGTAGCATTTTTTTTCATTTGCTTCTCTCAATGACCATAGCTCCTGGTAGTTTTATTTTTACGATTTTGTGATGCCTGCTTGAAGTTTGGTTTTTTTCGATTGGAAATCAGCAGTCAGGTGGTTGATTCTTTGATTTGATCAGTGTATCCGAGTTTGTGTTCATTGAAGTCATGTATTTTGTTAATTAAAAGGGTGTATACATTATGTTGTAACCTATACAAAAAGGAATATAACATTTGGGGTTTGCCATCAAGAGACCTTTGTGGCTCTGCTCTTGTTTTCGTTTTTTAAACGGTTGTATCCCAGGCCAGCTTGCATGCAGCTCGACTATTCCACCGAGGGCGATGCTTTGGTTCCTGAATTACTTATAAGTTCACATATTGGCCATAGATATTTATATCATATGTATTTGAGGTTTGTTTGGTTGCTAAATCAAAAGGACATTGTATCAAGAGTTAATCTCTTGGTGGTTTGCAATTCCATTATTGGAGAGTTTTGTTGAACAACTTTGTTAATGTTTAATGATTTACATTTATAATTAAGTGGTGTTGCTTGTAACAATTTTTTAAAATTTTTAATTCTTTTGGGATCAA</gDNA_template>
            <first_frame> P  F  S  R  S  S  L  N  H  D  D  V  F  I  L  D  T  K  D  K  I  Y  Q  F  N  G  A  N  S  N  I  Q  E  R  A  K  A  L  E  V  I  Q  F  L  K  E  K  Y  H  E  G  T  C  D  V  A  I  V   : D  D  G  N  L  Q  A  E  S  D  S  G  S  F  W  V  L  F  G  G  F  A  P  I  S  K  K  V  I  T  E  D  D  I  V  P  E  K  T  P  P  K  L  S  S :   I  T  D  G  Q  V  S  P  V  D  G  E  L  S  K  S  S  L  E  N  N  K  C  Y  L  L  D  C  G  A  E  V  F  V  W  I  G  R  V  T  Q  L  E  E  R  K  A  A  I  Q  T  A  E  :  E  Y  L  V  S  E  N  R  P  K  A  T  R  V  T  R  V  I  Q  G  Y  E  T  H  S  F  K  S  N  F  D  S  W  P  S  G  S  A  P  A  P  E  E  G  R  G  K  V  A   : A  L  L  K  Q  Q  G  A  G  V  K  G  A  S  K  S  A  P  V  I  E  E  V  P  P  L  L  E  E  G  G  K  L  E  :  V  W  R  I  N  G  N  A  K  T  P  V  P  K  E  D  I  G  K  F  Y  S  G  D  C  Y  V  V  L  Y  N  Y  H  S  H  E  R  R  D  D  Y  Y  L  C  W  W  I  G  K  D  S  I  E  :  E  D  Q  I  T  A  A  R  L  A  S  T  M  C  N  S  L  K  G  R  P  V  L  :  G  R  V  F  Q  G  K  E  P  P  Q  F  V  A  I  F  Q  P  M  L  V  L  K  :  G  G  L  S  T  G  Y  K  N  Y  I  A  D  K  G  L  N  D  E  T  Y  T  A  D  S  V  A  L  I  R  L  S  G  T  S  V  H  N  N  K  A  V  Q  V  D  A  :  V  P  S  S  L  N  S  N  E  C  F  L  L  Q  S  G  S  S  L  F  S  W  H  G  N  Q  S  S  Y  E  Q  Q  Q  L  A  A  K  V  A  E  F  L  K  :  P  G  A  T  V  K  H  T  K  E  G  T  E  S  S  A  F  W  F  A  L  G  G  K  Q  S  Y  T  S  K  K  V  A  P  E  V  S  R  D  P  H  L  F  A  Y  S  F  N  K   : G  K  F  E  :  V  E  E  I  Y  N  F  A  Q  D  D  L  L  T  E  D  V  L  L  L  D  T  H  A  E  V  F  V  W  V  G  Q  S  A  D  S  K  E  K  Q  S  A  F  E  I  G  Q  :  K  Y  V  E  M  A  A  S  L  E  G  L  S  P  N  V  P  L  Y  K  I  T  E  G  N  E  P  C  F  F  T  T  F  F  S  W  D  P  A  K  A  S  :  A  H  G  N  S  F  Q  K  K  V  M  L  L  F  G  V  G  H  A  S  E  :  N  Q  Q  R  S  N  G  A  G  G  P  T  Q  R  A  S  A  L  A  A  L  N  S  A  F  S  S  P  S  P  P  K  S  G  S  A  P  R  P  A  G  A  S  Q  A  S  S  Q  R  A  A  A  I  A  A  L  S  N  V  L  T  A  E  K  K  Q  S  S  E  S  G  S  P  V  Q  S  N  R  S  S  P  V  R  S  S  R  S  S  P  V  R  S  V  D  S  G  P  A   : E  S  D  L  S  T  A  E  V  Q  D  S  E  K  V  S  E  P  K  E  I  V  E  P  A  E  T  N  G  S  E  P  E  Q  D  E  G  G  N  E  S  G  Q  A  I  F  S  Y  E  Q  L  K  A  K  S  D  N  P  V  T  G  I  D  F  K  R  R  E  :  A  Y  L  S  D  E  E  F  M  S  V  L  G  M  K  K  E  A  F  Y  K  L  P  K  W  K  Q  D  M  H  K  R  K  T  D  L  F  *  I  L  H  R  R  N  Q  M  A  C  C  Y  L  V  V  A  I  L  D  I  R  S  H  V  S  C  Q  S  N  L  L  L  *  V  H  I  A  W  I  V  Y  V  A  F  F  F  I  C  F  S  Q  *  P  *  L  L  V  V  L  F  L  R  F  C  D  A  C  L  K  F  G  F  F  R  L  E  I  S  S  Q  V  V  D  S  L  I  *  S  V  Y  P  S  L  C  S  L  K  S  C  I  L  L  I  K  R  V  Y  T  L  C  C  N  L  Y  K  K  E  Y  N  I  W  G  L  P  S  R  D  L  C  G  S  A  L  V  F  V  F  *  T  V  V  S  Q  A  S  L  H  A  A  R  L  F  H  R  G  R  C  F  G  S  *  I  T  Y  K  F  T  Y  W  P  *  I  F  I  S  Y  V  F  E  V  C  L  V  A  K  S  K  G  H  C  I  K  S  *  S  L  G  G  L  Q  F  H  Y  W  R  V  L  L  N  N  F  V  N  V  *  *  F  T  F  I  I  K  W  C  C  L  *  Q  F  F  K  I  F  N  S  F  G  I   </first_frame>
            <second_frame>  H  S  P  G  P  L  *  I  M  M  M  C  S  F  W  T  L  K  T  R  Y  I  N  S  M  V  Q  T  P  I  S  K  K  G  P  K  H  W  K  L  F  S  F  *  R  K  N  I  M  R  G  R  V  M  L  Q  L  L  :  M  M  E  I  C  K  L  S  L  I  L  D  H  S  G  F  C  L  V  D  L  L  Q  L  A  K  R  L  L  L  K  M  I  L  F  P  R  R  H  L  L  N  L  A   : A  S  L  M  V  K  S  V  L  *  M  V  N  F  Q  S  L  A  W  K  T  I  N  A  I  F  W  I  A  V  L  R  C  L  F  G  L  V  V  *  L  N  W  R  R  G  K  L  P  F  K  L  Q  R :   N  I  L  S  L  K  I  D  P  R  Q  R  V  *  P  G  L  F  K  V  M  K  P  I  H  S  S  P  T  L  T  L  G  H  Q  D  L  H  L  P  L  K  R  E  E  E  K  *  Q  :  L  C  *  S  S  K  V  L  A  S  K  V  P  A  K  V  L  L  *  L  R  K  C  L  R  C  L  K  R  V  E  N  *  R :   Y  G  A  *  M  V  M  Q  R  H  L  S  Q  K  K  I  L  V  N  S  T  V  E  I  A  M  W  F  S  T  T  T  I  L  M  K  G  E  T  I  T  I  Y  V  G  G  L  E  R  I  V  L  R :   R  T  K  S  R  L  L  D  W  P  V  Q  C  A  I  H  S  K  E  D  L  C  W :   V  E  C  F  K  G  K  N  L  H  S  L  L  Q  S  S  S  P  C  W  S  L  R :   V  V  *  A  L  A  T  K  T  I  L  L  T  K  A  *  M  M  K  P  I  L  L  I  Q  L  H  L  F  G  Y  L  E  L  L  C  I  I  T  K  R  F  K  W  M  L :   C  Q  V  H  *  T  L  M  S  V  F  F  C  N  L  A  L  H  Y  S  V  G  M  V  T  R  V  L  M  S  S  S  N  *  Q  Q  R  L  Q  N  S  *  S :   Q  E  Q  Q  *  N  T  L  K  K  E  Q  R  A  L  L  S  G  L  P  L  E  E  N  K  V  I  P  A  R  K  W  L  Q  K  S  P  G  I  P  T  C  L  L  I  H  L  I  K  :  E  N  L  R :   L  K  K  S  T  T  L  L  K  M  I  Y  *  P  R  M  S  Y  Y  S  T  H  M  L  K  C  L  F  G  L  V  S  Q  Q  T  P  K  K  S  R  A  L  L  K  L  D  R :   N  T  W  R  W  L  H  L  W  K  D  Y  H  Q  M  F  H  S  I  K  S  Q  K  E  M  N  L  A  F  L  Q  H  F  S  H  G  I  L  Q  K  P  V :   L  M  E  T  H  S  R  R  R  L  C  Y  S  L  G  L  V  M  L  Q  R :   I  S  K  G  Q  M  G  Q  V  G  Q  P  K  G  L  Q  R  *  L  L  *  T  R  L  S  V  P  H  L  P  Q  N  L  V  L  H  R  G  L  L  E  Q  V  R  L  L  H  K  E  Q  L  Q  *  L  H  Y  L  T  F  L  Q  L  R  K  S  S  R  V  R  V  V  L  L  S  N  Q  T  E  A  H  L  Y  D  Q  A  E  A  L  L  F  D  Q  *  T  L  A  L  L  :  K  V  I  F  L  L  L  R  S  K  I  P  K  K  F  Q  N  L  R  R  L  L  S  L  L  K  L  M  G  Q  N  Q  S  R  M  R  V  E  M  K  V  V  K  L  Y  L  V  M  N  S  *  R  L  N  L  T  T  L  S  P  G  L  I  L  S  E  E  R :   P  I  Y  R  M  K  N  L  C  L  Y  L  V  *  R  K  K  H  S  T  S  C  L  N  G  N  K  I  C  T  K  G  K  L  I  S  S  R  S  C  I  G  E  T  K  W  P  V  A  I  L  L  L  Q  F  S  T  S  V  P  M  F  L  A  R  A  T  Y  F  Y  R  Y  I  L  P  G  S  C  M  *  H  F  F  S  F  A  S  L  N  D  H  S  S  W  *  F  Y  F  Y  D  F  V  M  P  A  *  S  L  V  F  F  D  W  K  S  A  V  R  W  L  I  L  *  F  D  Q  C  I  R  V  C  V  H  *  S  H  V  F  C  *  L  K  G  C  I  H  Y  V  V  T  Y  T  K  R  N  I  T  F  G  V  C  H  Q  E  T  F  V  A  L  L  L  F  S  F  F  K  R  L  Y  P  R  P  A  C  M  Q  L  D  Y  S  T  E  G  D  A  L  V  P  E  L  L  I  S  S  H  I  G  H  R  Y  L  Y  H  M  Y  L  R  F  V  W  L  L  N  Q  K  D  I  V  S  R  V  N  L  L  V  V  C  N  S  I  I  G  E  F  C  *  T  T  L  L  M  F  N  D  L  H  L  *  L  S  G  V  A  C  N  N  F  L  K  F  L  I  L  L  G  S  </second_frame>
            <third_frame>   I  L  P  V  L  S  K  S  *  *  C  V  H  S  G  H  *  R  Q  D  I  S  I  Q  W  C  K  L  Q  Y  P  R  K  G  Q  S  I  G  S  Y  S  V  F  E  G  K  I  S  *  G  D  V  *  C  C  N  C  * :   *  W  K  F  A  S  *  V  *  F  W  I  I  L  G  F  V  W  W  I  C  S  N  *  Q  K  G  Y  Y  *  R  *  Y  C  S  R  E  D  T  S  *  T  *  Q  :  H  H  *  W  S  S  Q  S  C  R  W  *  T  F  K  V  *  L  G  K  Q  *  M  L  S  F  G  L  R  C  *  G  V  C  L  D  W  S  C  N  S  T  G  G  E  E  S  C  H  S  N  C  R   : G  I  S  C  L  *  K  *  T  Q  G  N  A  C  N  P  G  Y  S  R  L  *  N  P  F  I  Q  V  Q  L  *  L  L  A  I  R  I  C  T  C  P  *  R  G  K  R  K  S  S  S :   F  A  E  A  A  R  C  W  R  Q  R  C  Q  Q  K  C  S  C  N  *  G  S  A  S  V  A  *  R  G  W  K  I  R   : G  M  A  H  K  W  *  C  K  D  T  C  P  K  R  R  Y  W  *  I  L  Q  W  R  L  L  C  G  S  L  Q  L  P  F  S  *  K  E  R  R  L  L  S  M  L  V  D  W  K  G  *  Y  *   : G  G  P  N  H  G  C  S  I  G  Q  Y  N  V  Q  F  T  Q  R  K  T  C  A   : G  S  S  V  S  R  E  R  T  S  T  V  C  C  N  L  P  A  H  V  G  P  *   : G  W  F  E  H  W  L  Q  K  L  Y  C  *  Q  R  L  E  *  *  N  L  Y  C  *  F  S  C  T  Y  S  V  I  W  N  F  C  A  *  *  Q  S  G  S  S  G  C   : C  A  K  F  T  E  L  *  *  V  F  S  S  A  I  W  L  F  I  I  Q  L  A  W  *  P  E  F  L  *  A  A  A  I  S  S  K  G  C  R  I  L  E   : A  R  S  N  S  E  T  H  *  R  R  N  R  E  L  C  F  L  V  C  P  W  R  K  T  K  L  Y  Q  Q  E  S  G  S  R  S  L  Q  G  S  P  L  V  C  L  F  I  *  *  R :   K  I  *   : G  *  R  N  L  Q  L  C  S  R  *  F  I  D  R  G  C  L  T  T  R  H  T  C  *  S  V  C  L  G  W  S  V  S  R  L  Q  R  K  A  E  R  F  *  N  W  T   : E  I  R  G  D  G  C  I  F  G  R  I  I  T  K  C  S  T  L  *  N  H  R  R  K  *  T  L  L  F  Y  N  I  F  L  M  G  S  C  K  S  Q   : C  S  W  K  L  I  P  E  E  G  Y  A  T  L  W  G  W  S  C  F  R   : E  S  A  K  V  K  W  G  R  W  A  N  P  K  G  F  S  V  S  C  F  K  L  G  F  Q  F  P  I  S  P  K  I  W  F  C  T  E  A  C  W  S  K  S  G  F  F  T  K  S  S  C  N  S  C  I  I  *  R  S  Y  S  *  E  K  A  V  E  *  E  W  F  S  C  P  I  K  Q  K  L  T  C  T  I  K  Q  K  L  S  C  S  I  S  R  L  W  P  C  * :   K  *  S  F  Y  C  *  G  P  R  F  R  K  S  F  R  T  *  G  D  C  *  A  C  *  N  *  W  V  R  T  R  A  G  *  G  W  K  *  K  W  S  S  Y  I  *  L  *  T  A  E  G  *  I  *  Q  P  C  H  R  D  *  F  *  A  K  R   : G  L  S  I  G  *  R  I  Y  V  C  T  W  Y  E  E  R  S  I  L  Q  V  A  *  M  E  T  R  Y  A  Q  K  E  N  *  S  L  L  D  P  A  S  E  K  P  N  G  L  L  L  S  C  C  C  N  S  R  H  P  F  P  C  F  L  P  E  Q  P  T  F  I  G  T  Y  C  L  D  R  V  C  S  I  F  F  H  L  L  L  S  M  T  I  A  P  G  S  F  I  F  T  I  L  *  C  L  L  E  V  W  F  F  S  I  G  N  Q  Q  S  G  G  *  F  F  D  L  I  S  V  S  E  F  V  F  I  E  V  M  Y  F  V  N  *  K  G  V  Y  I  M  L  *  P  I  Q  K  G  I  *  H  L  G  F  A  I  K  R  P  L  W  L  C  S  C  F  R  F  L  N  G  C  I  P  G  Q  L  A  C  S  S  T  I  P  P  R  A  M  L  W  F  L  N  Y  L  *  V  H  I  L  A  I  D  I  Y  I  I  C  I  *  G  L  F  G  C  *  I  K  R  T  L  Y  Q  E  L  I  S  W  W  F  A  I  P  L  L  E  S  F  V  E  Q  L  C  *  C  L  M  I  Y  I  Y  N  *  V  V  L  L  V  T  I  F  *  N  F  *  F  F  W  D  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99365" stop="99539"/>
                    <exon start="100412" stop="100544"/>
                    <exon start="102351" stop="102510"/>
                    <exon start="102584" stop="102731"/>
                    <exon start="102805" stop="102905"/>
                    <exon start="102992" stop="103150"/>
                    <exon start="103805" stop="103873"/>
                    <exon start="103948" stop="104016"/>
                    <exon start="104108" stop="104245"/>
                    <exon start="105008" stop="105136"/>
                    <exon start="106341" stop="106488"/>
                    <exon start="106586" stop="106596"/>
                    <exon start="106688" stop="106828"/>
                    <exon start="106912" stop="107037"/>
                    <exon start="107637" stop="107699"/>
                    <exon start="108263" stop="108557"/>
                    <exon start="108847" stop="109049"/>
                    <exon start="109528" stop="109641"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2379</number_coding_nucleotides>
                  <number_encoded_amino_acids>793</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFSRSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHEGTCDVAIVDDGNLQAESDSGSFWVLFGGFAPISKKVITEDDIVPEKTPPKLSSITDGQVSPVDGELSKSSLENNKCYLLDCGAEVFVWIGRVTQLEERKAAIQTAEEYLVSENRPKATRVTRVIQGYETHSFKSNFDSWPSGSAPAPEEGRGKVAALLKQQGAGVKGASKSAPVIEEVPPLLEEGGKLEVWRINGNAKTPVPKEDIGKFYSGDCYVVLYNYHSHERRDDYYLCWWIGKDSIEEDQITAARLASTMCNSLKGRPVLGRVFQGKEPPQFVAIFQPMLVLKGGLSTGYKNYIADKGLNDETYTADSVALIRLSGTSVHNNKAVQVDAVPSSLNSNECFLLQSGSSLFSWHGNQSSYEQQQLAAKVAEFLKPGATVKHTKEGTESSAFWFALGGKQSYTSKKVAPEVSRDPHLFAYSFNKGKFEVEEIYNFAQDDLLTEDVLLLDTHAEVFVWVGQSADSKEKQSAFEIGQKYVEMAASLEGLSPNVPLYKITEGNEPCFFTTFFSWDPAKASAHGNSFQKKVMLLFGVGHASENQQRSNGAGGPTQRASALAALNSAFSSPSPPKSGSAPRPAGASQASSQRAAAIAALSNVLTAEKKQSSESGSPVQSNRSSPVRSSRSSPVRSVDSGPAESDLSTAEVQDSEKVSEPKEIVEPAETNGSEPEQDEGGNESGQAIFSYEQLKAKSDNPVTGIDFKRREAYLSDEEFMSVLGMKKEAFYKLPKWKQDMHKRKTDLF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109949" stop="110266"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKGCIHYVVTYTKRNITFGVCHQETFVALLLFSFFKRLYPRPACMQLDYSTEGDALVPELLISSHIGHRYLYHMYLRFVWLLNQKDIVSRVNLLVVCNSIIGEFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109632" stop="109835"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLLDPASEKPNGLLLSCCCNSRHPFPCFLPEQPTFIGTYCLDRVCSIFFHLLLSMTIAPGSFIFTIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="105029" e_stop="105136"/>
            <exon e_start="106341" e_stop="106488"/>
            <exon e_start="106586" e_stop="106596"/>
            <exon e_start="106688" e_stop="106828"/>
            <exon e_start="106912" e_stop="106929"/>
            <exon e_start="107026" e_stop="107037"/>
            <exon e_start="107637" e_stop="107699"/>
            <exon e_start="108263" e_stop="108557"/>
            <exon e_start="108847" e_stop="108902"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.910" acc_prob="0.999" e_score="0.963"/>
          <exon-intron don_prob="0.999" acc_prob="0.401" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.125" e_score="0.993"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="105029" e_stop="105136" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="0.910" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105137" i_stop="106340" i_length="1204"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106341" e_stop="106488" e_length="148"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.401">
            <gDNA_intron_boundary i_start="106489" i_stop="106585" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="106586" e_stop="106596" e_length="11"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="106597" i_stop="106687" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="106688" e_stop="106828" e_length="141"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="106829" i_stop="106911" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106912" e_stop="106929" e_length="18"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106930" i_stop="107025" i_length="96"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="107026" e_stop="107037" e_length="12"/>
          </exon>
          <intron i_serial="6" don_prob="0.923" acc_prob="0.989">
            <gDNA_intron_boundary i_start="107038" i_stop="107636" i_length="599"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="107637" e_stop="107699" e_length="63"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.723">
            <gDNA_intron_boundary i_start="107700" i_stop="108262" i_length="563"/>
          </intron>
          <exon e_serial="8" e_score="0.993">
            <gDNA_exon_boundary e_start="108263" e_stop="108557" e_length="295"/>
          </exon>
          <intron i_serial="8" don_prob="0.982" acc_prob="0.125">
            <gDNA_intron_boundary i_start="108558" i_stop="108846" i_length="289"/>
          </intron>
          <exon e_serial="9" e_score="0.982">
            <gDNA_exon_boundary e_start="108847" e_stop="108902" e_length="56"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105029" stop="105136"/>
              <exon start="106341" stop="106488"/>
              <exon start="106586" stop="106596"/>
              <exon start="106688" stop="106828"/>
              <exon start="106912" stop="106929"/>
              <exon start="107026" stop="107037"/>
              <exon start="107637" stop="107699"/>
              <exon start="108263" stop="108557"/>
              <exon start="108847" stop="108902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333826" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGAGTGTTTTCTTCTGCAATCTGGCTCTTCATTATTCAGTTGGCATGGTAACCAGAGTTCTTATGAGCAGCAGCAATTAGCAGCAAAGGTTGCAGAATTCTTGAAG : CCAGGAGCAACAGTGAAACACACTAAAGAAGGAACAGAGAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTATACCAGCAAGAAAGTGGCTCCAGAAGTCTCCAGGGATCCCCACTTGTTTGCTTATTCATTTAATAAAG : GAAAATTTGAG : GTTGAAGAAATCTACAACTTTGCTCAAGATGATTTATTGACCGAGGATGTCTTACTACTCGACACACATGCTGAAGTGTTTGTTTGGGTTGGTCAGTCAGCAGACTCCAAAGAAAAGCAGAGCGCTTTTGAAATTGGACAG : AAATACGTGGAGATGGCT : GCAAAAGCCAGT : GCTCATGGAAACTCATTCCAGAAGAAGGTTATGCTACTCTTTGGGGTTGGTCATGCTTCAGAG : AATCAGCAAAGGTCAAATGGGGCAGGTGGGCCAACCCAAAGGGCTTCAGCGTTAGCTGCTTTAAACTCGGCTTTCAGTTCCCCATCTCCCCCAAAATCTGGTTCTGCACCGAGGCCTGCTGGAGCAAGTCAGGCTTCTTCACAAAGAGCAGCTGCAATAGCTGCATTATCTAACGTTCTTACAGCTGAGAAAAAGCAGTCGAGTGAGAGTGGTTCTCCTGTCCAATCAAACAGAAGCTCACCTGTACGATCAAGCAGAAGCTCTCCTGTTCGATCAGTAGACTCTGGCCCTGCTG : AAAGTGATCTTTCTACTGCTGAGGTCCAAGATTCCGAAAAAGTTTCAGAACCTAAG</gDNA_template>
            <first_frame> N  E  C  F  L  L  Q  S  G  S  S  L  F  S  W  H  G  N  Q  S  S  Y  E  Q  Q  Q  L  A  A  K  V  A  E  F  L  K  :  P  G  A  T  V  K  H  T  K  E  G  T  E  S  S  A  F  W  F  A  L  G  G  K  Q  S  Y  T  S  K  K  V  A  P  E  V  S  R  D  P  H  L  F  A  Y  S  F  N  K   : G  K  F  E  :  V  E  E  I  Y  N  F  A  Q  D  D  L  L  T  E  D  V  L  L  L  D  T  H  A  E  V  F  V  W  V  G  Q  S  A  D  S  K  E  K  Q  S  A  F  E  I  G  Q  :  K  Y  V  E  M  A  :  A  K  A  S  :  A  H  G  N  S  F  Q  K  K  V  M  L  L  F  G  V  G  H  A  S  E  :  N  Q  Q  R  S  N  G  A  G  G  P  T  Q  R  A  S  A  L  A  A  L  N  S  A  F  S  S  P  S  P  P  K  S  G  S  A  P  R  P  A  G  A  S  Q  A  S  S  Q  R  A  A  A  I  A  A  L  S  N  V  L  T  A  E  K  K  Q  S  S  E  S  G  S  P  V  Q  S  N  R  S  S  P  V  R  S  S  R  S  S  P  V  R  S  V  D  S  G  P  A   : E  S  D  L  S  T  A  E  V  Q  D  S  E  K  V  S  E  P  K </first_frame>
            <second_frame>  M  S  V  F  F  C  N  L  A  L  H  Y  S  V  G  M  V  T  R  V  L  M  S  S  S  N  *  Q  Q  R  L  Q  N  S  *  S :   Q  E  Q  Q  *  N  T  L  K  K  E  Q  R  A  L  L  S  G  L  P  L  E  E  N  K  V  I  P  A  R  K  W  L  Q  K  S  P  G  I  P  T  C  L  L  I  H  L  I  K  :  E  N  L  R :   L  K  K  S  T  T  L  L  K  M  I  Y  *  P  R  M  S  Y  Y  S  T  H  M  L  K  C  L  F  G  L  V  S  Q  Q  T  P  K  K  S  R  A  L  L  K  L  D  R :   N  T  W  R  W  L :   Q  K  P  V :   L  M  E  T  H  S  R  R  R  L  C  Y  S  L  G  L  V  M  L  Q  R :   I  S  K  G  Q  M  G  Q  V  G  Q  P  K  G  L  Q  R  *  L  L  *  T  R  L  S  V  P  H  L  P  Q  N  L  V  L  H  R  G  L  L  E  Q  V  R  L  L  H  K  E  Q  L  Q  *  L  H  Y  L  T  F  L  Q  L  R  K  S  S  R  V  R  V  V  L  L  S  N  Q  T  E  A  H  L  Y  D  Q  A  E  A  L  L  F  D  Q  *  T  L  A  L  L  :  K  V  I  F  L  L  L  R  S  K  I  P  K  K  F  Q  N  L   </second_frame>
            <third_frame>   *  V  F  S  S  A  I  W  L  F  I  I  Q  L  A  W  *  P  E  F  L  *  A  A  A  I  S  S  K  G  C  R  I  L  E   : A  R  S  N  S  E  T  H  *  R  R  N  R  E  L  C  F  L  V  C  P  W  R  K  T  K  L  Y  Q  Q  E  S  G  S  R  S  L  Q  G  S  P  L  V  C  L  F  I  *  *  R :   K  I  *   : G  *  R  N  L  Q  L  C  S  R  *  F  I  D  R  G  C  L  T  T  R  H  T  C  *  S  V  C  L  G  W  S  V  S  R  L  Q  R  K  A  E  R  F  *  N  W  T   : E  I  R  G  D  G   : C  K  S  Q   : C  S  W  K  L  I  P  E  E  G  Y  A  T  L  W  G  W  S  C  F  R   : E  S  A  K  V  K  W  G  R  W  A  N  P  K  G  F  S  V  S  C  F  K  L  G  F  Q  F  P  I  S  P  K  I  W  F  C  T  E  A  C  W  S  K  S  G  F  F  T  K  S  S  C  N  S  C  I  I  *  R  S  Y  S  *  E  K  A  V  E  *  E  W  F  S  C  P  I  K  Q  K  L  T  C  T  I  K  Q  K  L  S  C  S  I  S  R  L  W  P  C  * :   K  *  S  F  Y  C  *  G  P  R  F  R  K  S  F  R  T  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105029" stop="105136"/>
                    <exon start="106341" stop="106488"/>
                    <exon start="106586" stop="106596"/>
                    <exon start="106688" stop="106828"/>
                    <exon start="106912" stop="106929"/>
                    <exon start="107026" stop="107037"/>
                    <exon start="107637" stop="107699"/>
                    <exon start="108263" stop="108557"/>
                    <exon start="108847" stop="108902"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NECFLLQSGSSLFSWHGNQSSYEQQQLAAKVAEFLKPGATVKHTKEGTESSAFWFALGGKQSYTSKKVAPEVSRDPHLFAYSFNKGKFEVEEIYNFAQDDLLTEDVLLLDTHAEVFVWVGQSADSKEKQSAFEIGQKYVEMAAKASAHGNSFQKKVMLLFGVGHASENQQRSNGAGGPTQRASALAALNSAFSSPSPPKSGSAPRPAGASQASSQRAAAIAALSNVLTAEKKQSSESGSPVQSNRSSPVRSSRSSPVRSVDSGPAESDLSTAEVQDSEKVSEPK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="112730" PGL_stop="114207"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112730" e_stop="112834"/>
            <exon e_start="112987" e_stop="114207"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.990"/>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="112730" e_stop="112834" e_length="105"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="112835" i_stop="112986" i_length="152"/>
          </intron>
          <exon e_serial="2" e_score="0.953">
            <gDNA_exon_boundary e_start="112987" e_stop="114207" e_length="1221"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112730" stop="112834"/>
              <exon start="112987" stop="113397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113253" stop="114148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113922" stop="114207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGA : ATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGCTGATTTTATGATATTGCTTAATGCATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAACAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAACTGGTTTTTTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACACCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTCCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  L  M  N  E  S  G  E  I  R  G  S  G  A  T  F  R  Y  Q  D  R  :  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  I  *  *  Y  I  Q  S  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  V  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  M  H  T  V  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  V  C  T  D  P  Y  F  Y  V  F  L  L  V  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  R  F  *  L  G  L  D  L  L  L  H  V  L  M  P  *  T  S  G  M  D  *  L  L  M  Y  F  *  L  L  R  N  S  *  N  *  *  F  K  V  D  V  L  V  M  M  T  S  R  F  W  E  *  *  M  L  N  I  D  S  Y  *  T  G  F  F  Y  *  *  V  *  V  F  R  I  T  F  C  C  Y  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  R  P  G  F  G  S  *  Q  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  H  L  Y  F  S  L  R  G  Y  K  T  L  E  K  F  H  S  F  I  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  S  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  Q  D  K  K  R  L  S  Q  P  L  G  L  * </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  E :   Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  G  E  *  R  *  *  I  L  K  Y  D  N  I  S  N  L  M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  C  I  L  F  S  I  L  S  W  P  M  I  S  T  Q  Y  P  W  F  V  L  T  P  T  F  M  F  F  F  L  L  F  V  E  C  N  K  R  A  V  I  F  D  S  T  V  T  Q  A  S  L  R  H  T  G  S  S  G  *  A  N  A  S  S  L  D  W  I  F  S  F  M  S  *  C  L  E  L  P  A  W  T  S  F  L  C  I  F  S  F  L  E  T  L  R  I  S  S  L  K  *  M  F  L  *  *  *  L  P  G  F  G  N  N  R  C  *  I  L  I  V  I  E  L  V  F  F  I  N  E  F  K  S  S  A  L  L  S  V  A  I  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  G  P  D  L  G  R  D  K  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  K  E  R  *  G  D  T  F  T  F  P  *  E  A  I  R  L  *  K  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  P  L  S  F  A  D  G  *  N  *  S  N  D  Y  A  N  T  N  I  G  K  T  R  S  V  *  A  S  H  W  G  C   </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  W  *  D  *  G  I  G  C  H  V  P  V  P  G  *   : N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  G  N  K  D  N  E  S  *  N  M  I  I  Y  P  I  *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  A  D  F  M  I  L  L  N  A  Y  C  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  G  L  Y  *  P  L  L  L  C  F  S  S  C  Y  L  W  S  A  T  N  V  P  S  S  S  T  Q  Q  *  L  K  P  V  F  V  T  P  D  L  Q  G  E  L  T  L  L  A  W  T  G  S  S  P  S  C  L  D  A  L  N  F  R  H  G  L  A  S  Y  V  F  L  A  S  *  K  L  L  E  L  V  V  *  S  R  C  S  C  D  D  D  F  Q  V  L  G  I  I  D  V  E  Y  *  *  L  L  N  W  F  F  L  L  M  S  L  S  L  P  H  Y  F  L  L  L  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  A  R  I  W  V  V  T  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  I  S  L  F  H  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  L  S  Q  M  V  R  T  R  A  T  T  T  P  T  P  T  S  A  R  Q  E  A  S  E  P  A  T  G  A  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113971" stop="114207"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGHLYFSLRGYKTLEKFHSFILSFVLLLESNWYLGDTNWYLTISTLFRRWLELEQRLRQHQHRQDKKRLSQPLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="114646" PGL_stop="114214"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114646" e_stop="114214"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="114646" e_stop="114214" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114646" stop="114214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGTCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTGTCTGGCCCTGATCAGACAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTAGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACCTCCTCAGTCGGTAGAGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGTTTGTCCTCTTCCCCTAGAGGACGTCCTCCCACGACCTCTACCATGGCCCCTTGCCGCTGTTCTTC</gDNA_template>
            <first_frame> P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  R  G  N  V  P  I  S  N  G  T  S  M  R  G  V  I  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  N  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  R  V  G  W  G  G  I  S  S  F  C  T  C  S  V  S  P  S  S  P  S  L  I  T  S  S  V  G  R  G  V  T  A  L  V  S  D  G  L  G  V  C  P  L  P  L  E  D  V  L  P  R  P  L  P  W  P  L  A  A  V  L  </first_frame>
            <second_frame>  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  G  Q  *  S  D  V  E  T  C  L  F  P  M  E  H  P  C  G  E  S  *  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  K  T  L  G  V  S  G  P  D  Q  T  T  R  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  A  L  V  Q  F  P  H  P  P  L  L  L  L  P  P  Q  S  V  E  E  S  L  P  *  Y  Q  M  G  *  V  F  V  L  F  P  *  R  T  S  S  H  D  L  Y  H  G  P  L  P  L  F  F </second_frame>
            <third_frame>   L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  A  S  S  Q  T  W  K  R  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  K  H  W  G  C  L  A  L  I  R  Q  P  A  K  I  S  Q  N  L  I  D  H  L  *  G  R  L  G  W  H  F  L  I  L  H  L  F  S  F  P  I  L  P  F  S  Y  Y  L  L  S  R  *  R  S  H  C  P  S  I  R  W  A  R  C  L  S  S  S  P  R  G  R  P  P  T  T  S  T  M  A  P  C  R  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114644" stop="114399"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEDWRFQFQELTEKFMLIICHYRASSQTWKRAYFQWNIHAGSHSSRMLYLRSLRCWCRKHWGCLALIRQPAKISQNLIDHL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114412" stop="114215"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISRVGWGGISSFCTCSVSPSSPSLITSSVGRGVTALVSDGLGVCPLPLEDVLPRPLPWPLAAVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="114281" PGL_stop="114834"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114281" e_stop="114834"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="114281" e_stop="114834" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114281" stop="114834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCTACCGACTGAGGAGGTAATAAGAGAAGGGGAGGATGGGGAAACTGAACAAGTGCAAAATGAGGAAATGCCACCCCAACCTACCCTAGAGATGATCAATCAGGTTCTGGCTTATCTTAGCGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGACTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGCCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGAAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  S  D  S  S  T  D  *  G  G  N  K  R  R  G  G  W  G  N  *  T  S  A  K  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  L  S  *  R  V  V  *  S  G  P  D  T  P  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  D  S  P  H  G  C  S  I  G  N  R  H  V  S  T  S  D  Y  W  P  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  G  I  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  K  R  Q  N  V  V  A  V  T  Y  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  L  P  T  E  E  V  I  R  E  G  E  D  G  E  T  E  Q  V  Q  N  E  E  M  P  P  Q  P  T  L  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  T  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  I  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  Q  *  L  L  Y  R  L  R  R  *  *  E  K  G  R  M  G  K  L  N  K  C  K  M  R  K  C  H  P  N  L  P  *  R  *  S  I  R  F  W  L  I  L  A  G  C  L  I  R  A  R  H  P  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  *  L  P  A  W  M  F  H  W  K  *  A  R  F  H  V  *  L  L  A  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  R  N  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  E  T  P  K  C  G  G  G  H  I  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114282" stop="114833"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPLPTEEVIREGEDGETEQVQNEEMPPQPTLEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHAATMTPRMDVPLEIGTFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVSYQFQGNAKMWWRSHIECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="115891" PGL_stop="115561"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115891" e_stop="115561"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="115891" e_stop="115561" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115891" stop="115561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTCTGTCCCAGGCTTGGCTAACGTCACTGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGAAATTCACAATGTAATTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACCAG</gDNA_template>
            <first_frame> G  L  S  Q  A  W  L  T  S  L  F  *  H  Y  N  P  R  L  Q  I  A  E  K  A  K  S  Y  P  E  S  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  L  P  N  K  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  Q  E  I  H  N  V  I  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  R  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  V  C  P  R  L  G  *  R  H  C  F  S  I  T  I  Q  D  C  K  L  R  R  K  P  S  H  T  Q  N  H  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  K  V  Y  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  K  F  T  M  *  F  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  G  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  R  N  S  Q  C  N  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04SLm0143K21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="118363" PGL_stop="118187"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118363" e_stop="118187"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="118363" e_stop="118187" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118363" stop="118187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCGAATGGAGCCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  I  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  R  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  L  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  R  M  E  P  Y  Q  Y  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  G  S  Y  P  N  D  H  Q  T  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  S  F  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  E  W  S  H  I  N  T  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  T  T  K  L  Y  H  T  R  T  K  H  I  L  Q  H  L  N  R  P  F  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04SLm0143K21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="119934" PGL_stop="120601"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119934" e_stop="120038"/>
            <exon e_start="120191" e_stop="120601"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.990"/>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="119934" e_stop="120038" e_length="105"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="120039" i_stop="120190" i_length="152"/>
          </intron>
          <exon e_serial="2" e_score="0.934">
            <gDNA_exon_boundary e_start="120191" e_stop="120601" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119934" stop="120038"/>
              <exon start="120191" stop="120601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335078" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGA : ATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGCTGATTTTATGATATTGCTTAATGCATACT</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  L  M  N  E  S  G  E  I  R  G  S  G  A  T  F  R  Y  Q  D  R  :  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  I  *  *  Y  I  Q  S  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  V  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  M  H  T </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  E :   Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  G  E  *  R  *  *  I  L  K  Y  D  N  I  S  N  L  M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  C  I   </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  W  *  D  *  G  I  G  C  H  V  P  V  P  G  *   : N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  G  N  K  D  N  E  S  *  N  M  I  I  Y  P  I  *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  A  D  F  M  I  L  L  N  A  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C04SLm0143K21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="127109" PGL_stop="128234"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127109" e_stop="127304"/>
            <exon e_start="127733" e_stop="128234"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.807" acc_prob="0.995" e_score="0.888"/>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.888">
            <gDNA_exon_boundary e_start="127109" e_stop="127304" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.807" acc_prob="0.995">
            <gDNA_intron_boundary i_start="127305" i_stop="127732" i_length="428"/>
          </intron>
          <exon e_serial="2" e_score="0.916">
            <gDNA_exon_boundary e_start="127733" e_stop="128234" e_length="502"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127109" stop="127304"/>
              <exon start="127733" stop="128234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333723" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAGATTTCACTGAACAGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTTCATTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAG : AGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTTCAAAGTTTTCTGGAGTCGACTTTAAGAGATGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCACCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTATAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATC</gDNA_template>
            <first_frame> K  Q  I  S  L  N  R  H  V  P  C  *  K  W  L  *  K  E  V  N  F  *  F  F  N  H  *  K  F  F  H  S  L  H  L  F  F  S  Q  I  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  K  F  V  E  V  K  E  V  *   : E  K  K  K  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  F  K  V  F  W  S  R  L  *  E  M  Q  Q  K  M  F  F  Y  L  T  T  L  S  L  Q  K  F  T  K  E  N  V  P  V  M  S  D  E  T  P  A  D  E  R  F  L  V  T  E  A  W  T  H  S  D  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  S  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  A  G  H  N  P  *   </first_frame>
            <second_frame>  N  R  F  H  *  T  D  M  F  L  A  E  N  G  Y  K  R  K  S  I  F  D  F  L  I  T  E  N  F  F  I  L  C  I  Y  F  S  L  K  *  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  L  S  S  L  K  L  K  K  F  E  :  R  K  K  K  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  A  A  L  A  P  A  E  K  P  S  K  F  S  G  V  D  F  K  R  C  S  K  R  C  S  S  I  S  L  R  *  V  C  R  S  S  P  K  R  M  F  L  L  C  Q  M  K  L  R  L  M  N  D  S  W  *  Q  K  H  G  H  T  Q  I  F  C  V  K  I  I  F  *  V  V  C  K  M  I  C  T  M  C  I  A  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  Q  V  I  I  H  D  </second_frame>
            <third_frame>   T  D  F  T  E  Q  T  C  S  L  L  K  M  A  I  K  G  S  Q  F  L  I  F  *  S  L  K  I  F  S  F  S  A  F  I  F  L  S  N  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  *  V  R  *  S  *  R  S  L  R :   E  K  K  R  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  R  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  A  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  R  E  C  S  C  Y  V  R  *  N  S  G  *  *  T  I  L  G  N  R  S  M  D  T  L  R  F  F  V  *  K  L  Y  F  E  W  S  A  R  *  S  V  Q  C  V  *  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  C  R  S  *  S  M  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127870" stop="128172"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMQQKMFFYLTTLSLQKFTKENVPVMSDETPADERFLVTEAWTHSDFLCKNYILSGLQDDLYNVYSNAKTSKELWDALEKKYKTEDAGMKKFIVAKISGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127230" stop="127304"/>
                    <exon start="127733" stop="127909"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQSVDRLSLCDLLLFLSSLKLKKFERKKKTNSSQTNAGTVSAATTTVAHNRSNAALAPAEKPSKFSGVDFKRCSKRCSSISLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="127127" e_stop="128234"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="127127" e_stop="128234" e_length="1108"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127127" stop="128234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312594" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTTCATTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTATTCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTATTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTCTGTTTATTAACTTTATAAATACAAGTTATTGTAAGAATAACAATCTTAAGAAATTTAGACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGATTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTTCAAAGTTTTCTGGAGTCGACTTTAAGAGATGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCACCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTATAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATC</gDNA_template>
            <first_frame> R  H  V  P  C  *  K  W  L  *  K  E  V  N  F  *  F  F  N  H  *  K  F  F  H  S  L  H  L  F  F  S  Q  I  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  K  F  V  E  V  K  E  V  *  G  T  A  I  S  L  T  G  L  F  R  F  I  L  G  E  I  N  P  *  P  W  V  Q  *  G  D  *  I  Y  *  G  H  T  V  V  S  V  D  S  D  *  F  L  Y  S  I  L  F  S  A  S  S  Y  F  C  F  C  F  C  L  L  T  L  *  I  Q  V  I  V  R  I  T  I  L  R  N  L  D  S  F  C  I  *  G  F  W  R  L  K  P  L  *  F  S  T  L  L  E  F  L  K  F  I  R  L  T  I  K  R  T  *  K  L  Y  R  *  I  R  N  S  L  C  K  D  L  F  F  T  V  S  I  L  N  T  *  F  I  C  H  L  *  Q  R  K  K  K  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  A  A  L  A  P  A  E  K  P  S  K  F  S  G  V  D  F  K  R  C  S  K  R  C  S  S  I  S  L  R  *  V  C  R  S  S  P  K  R  M  F  L  L  C  Q  M  K  L  R  L  M  N  D  S  W  *  Q  K  H  G  H  T  Q  I  F  C  V  K  I  I  F  *  V  V  C  K  M  I  C  T  M  C  I  A  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  Q  V  I  I  H  D  </first_frame>
            <second_frame>  D  M  F  L  A  E  N  G  Y  K  R  K  S  I  F  D  F  L  I  T  E  N  F  F  I  L  C  I  Y  F  S  L  K  *  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  L  S  S  L  K  L  K  K  F  E  V  P  L  F  L  *  Q  V  Y  S  V  L  S  W  E  K  L  I  H  N  L  G  Y  S  E  G  I  K  F  I  K  D  T  Q  *  F  L  W  T  R  I  N  S  C  I  L  Y  Y  F  L  L  H  L  I  S  V  S  V  S  V  Y  *  L  Y  K  Y  K  L  L  *  E  *  Q  S  *  E  I  *  T  V  S  V  F  E  V  S  G  D  *  N  L  Y  D  F  L  L  C  L  N  F  *  N  S  F  D  *  R  L  K  E  H  K  N  F  I  V  K  S  E  T  V  C  V  K  I  C  S  L  L  L  V  F  *  I  L  N  L  S  A  I  C  D  R  E  K  K  R  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  R  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  A  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  R  E  C  S  C  Y  V  R  *  N  S  G  *  *  T  I  L  G  N  R  S  M  D  T  L  R  F  F  V  *  K  L  Y  F  E  W  S  A  R  *  S  V  Q  C  V  *  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  C  R  S  *  S  M  I </second_frame>
            <third_frame>   T  C  S  L  L  K  M  A  I  K  G  S  Q  F  L  I  F  *  S  L  K  I  F  S  F  S  A  F  I  F  L  S  N  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  *  V  R  *  S  *  R  S  L  R  Y  R  Y  F  F  N  R  F  I  P  F  Y  L  G  R  N  *  S  I  T  L  G  T  V  R  G  L  N  L  L  R  T  H  S  S  F  C  G  L  G  L  I  L  V  F  Y  I  I  F  C  F  I  L  F  L  F  L  F  L  F  I  N  F  I  N  T  S  Y  C  K  N  N  N  L  K  K  F  R  Q  F  L  Y  L  R  F  L  E  I  K  T  F  M  I  F  Y  S  A  *  I  F  K  I  H  S  I  N  D  *  K  N  I  K  T  L  S  L  N  Q  K  Q  F  V  *  R  F  V  L  Y  C  *  Y  F  K  Y  L  I  Y  L  P  F  V  T  E  K  K  K  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  F  K  V  F  W  S  R  L  *  E  M  Q  Q  K  M  F  F  Y  L  T  T  L  S  L  Q  K  F  T  K  E  N  V  P  V  M  S  D  E  T  P  A  D  E  R  F  L  V  T  E  A  W  T  H  S  D  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  S  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  A  G  H  N  P  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127870" stop="128172"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMQQKMFFYLTTLSLQKFTKENVPVMSDETPADERFLVTEAWTHSDFLCKNYILSGLQDDLYNVYSNAKTSKELWDALEKKYKTEDAGMKKFIVAKISGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C04SLm0143K21.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127357" stop="127599"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SITLGTVRGLNLLRTHSSFCGLGLILVFYIIFCFILFLFLFLFINFINTSYCKNNNLKKFRQFLYLRFLEIKTFMIFYSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 113 chains have been computed
$ 
$ memory statistics:
$ 260264 bytes spliced alignments in total
$ 37 spliced alignments have been stored
$ 7034 bytes was the average size of a spliced alignment
$ 28464 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1498 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 156 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 00:01:16
-->
