##gff-version 3
##sequence-region C04SLm0096N24.1 1 133797
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	25681	27809	0.943	-	0	ID=SGN-U331086_alignment_1;Target=SGN-U331086 1 576 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	27708	27809	0.912	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U331086 1 102 +;Parent=SGN-U331086_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	27349	27639	0.955	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U331086 103 393 +;Parent=SGN-U331086_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	25681	25863	0.940	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U331086 394 576 +;Parent=SGN-U331086_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	28694	34325	0.963	-	0	ID=SGN-U332010_alignment_1;Target=SGN-U332010 1 1052 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	34150	34325	0.955	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U332010 1 176 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	33792	33900	0.982	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U332010 177 285 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	29702	29877	0.949	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U332010 286 462 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	29283	29568	0.972	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U332010 463 748 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	29100	29190	0.967	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U332010 749 839 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	28846	28979	0.948	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U332010 840 973 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	28694	28772	0.975	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U332010 974 1052 +;Parent=SGN-U332010_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	29783	52349	0.927	-	0	ID=SGN-U331870_alignment_1;Target=SGN-U331870 1 784 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	52221	52349	0.915	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U331870 1 129 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	52010	52120	0.964	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U331870 130 240 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	50621	50731	0.919	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U331870 241 351 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	50420	50503	0.964	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U331870 352 435 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	50265	50327	0.937	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U331870 436 498 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	45600	45728	0.969	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U331870 499 627 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	44089	44151	0.937	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U331870 628 690 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	29783	29877	0.811	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U331870 691 784 +;Parent=SGN-U331870_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	31485	36948	0.915	-	0	ID=SGN-U346023_alignment_1;Target=SGN-U346023 1 517 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	36552	36948	0.932	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U346023 1 397 +;Parent=SGN-U346023_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	31485	31605	0.860	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U346023 398 517 +;Parent=SGN-U346023_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	37706	37882	0.944	+	0	ID=SGN-U345909_alignment_1;Target=SGN-U345909 1 177 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	37706	37882	0.944	+	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U345909 1 177 +;Parent=SGN-U345909_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	39187	39900	0.923	+	0	ID=SGN-U326740_alignment_1;Target=SGN-U326740 1 712 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	39187	39900	0.923	+	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U326740 1 712 +;Parent=SGN-U326740_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	40162	40715	0.906	-	0	ID=SGN-U335931_alignment_1;Target=SGN-U335931 1 554 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	40162	40715	0.906	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U335931 1 554 +;Parent=SGN-U335931_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	40789	41074	0.930	-	0	ID=SGN-U335073_alignment_1;Target=SGN-U335073 1 286 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	40789	41074	0.930	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U335073 1 286 +;Parent=SGN-U335073_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	41198	50293	0.990	-	0	ID=SGN-U335072_alignment_1;Target=SGN-U335072 1 544 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	50265	50293	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U335072 1 29 +;Parent=SGN-U335072_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	45600	45629	1.000	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U335072 30 59 +;Parent=SGN-U335072_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	44427	44552	0.992	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U335072 60 185 +;Parent=SGN-U335072_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	44089	44151	0.984	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U335072 186 248 +;Parent=SGN-U335072_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	41198	41493	0.990	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U335072 249 544 +;Parent=SGN-U335072_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	82653	84314	0.936	+	0	ID=SGN-U315285_alignment_1;Target=SGN-U315285 1 1660 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	82653	84314	0.936	+	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U315285 1 1660 +;Parent=SGN-U315285_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	84392	85828	0.910	-	0	ID=SGN-U317064_alignment_1;Target=SGN-U317064 1 1437 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	84392	85828	0.910	-	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U317064 1 1437 +;Parent=SGN-U317064_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	85274	85832	0.918	-	0	ID=SGN-U335930_alignment_1;Target=SGN-U335930 1 559 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	85274	85832	0.918	-	0	ID=GTH_SGN_U_tom_match_part_32;Target=SGN-U335930 1 559 +;Parent=SGN-U335930_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	85685	86442	0.920	-	0	ID=SGN-U317065_alignment_1;Target=SGN-U317065 1 757 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	85685	86442	0.920	-	0	ID=GTH_SGN_U_tom_match_part_33;Target=SGN-U317065 1 757 +;Parent=SGN-U317065_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	85709	86039	0.915	-	0	ID=SGN-U335937_alignment_1;Target=SGN-U335937 1 331 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	85709	86039	0.915	-	0	ID=GTH_SGN_U_tom_match_part_34;Target=SGN-U335937 1 331 +;Parent=SGN-U335937_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	86319	87031	0.921	-	0	ID=SGN-U326740_alignment_2;Target=SGN-U326740 1 712 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	86319	87031	0.921	-	0	ID=GTH_SGN_U_tom_match_part_35;Target=SGN-U326740 1 712 +;Parent=SGN-U326740_alignment_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	88336	88512	0.938	-	0	ID=SGN-U345909_alignment_2;Target=SGN-U345909 1 177 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	88336	88512	0.938	-	0	ID=GTH_SGN_U_tom_match_part_36;Target=SGN-U345909 1 177 +;Parent=SGN-U345909_alignment_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match	90463	90799	0.917	-	0	ID=SGN-U335079_alignment_1;Target=SGN-U335079 1 337 +
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	match_part	90463	90799	0.917	-	0	ID=GTH_SGN_U_tom_match_part_37;Target=SGN-U335079 1 337 +;Parent=SGN-U335079_alignment_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	25681	27809	.	-	0	ID=GTH_SGN_U_tom_gene_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	25681	27809	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	27708	27809	0.912	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	27349	27639	0.955	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	25681	25863	0.940	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	28694	52349	.	-	0	ID=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	29783	52349	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	52221	52349	0.915	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	52010	52120	0.964	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	50621	50731	0.919	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	50420	50503	0.964	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	50265	50327	0.937	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	45600	45728	0.969	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	44089	44151	0.937	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	29783	29877	0.811	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	28694	34325	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_2;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	34150	34325	0.955	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	33792	33900	0.982	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	29702	29877	0.949	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	29283	29568	0.972	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	29100	29190	0.967	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	28846	28979	0.948	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	28694	28772	0.975	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	31485	36948	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_3;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	36552	36948	0.932	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_2_AGS_3
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	31485	31605	0.860	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_2_AGS_3
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	40162	40715	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_4;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	40162	40715	0.906	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_2_AGS_4
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	40789	41074	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_5;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	40789	41074	0.930	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_2_AGS_5
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	41198	50293	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_6;Parent=GTH_SGN_U_tom_gene_2
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	50265	50293	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_2_AGS_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	45600	45629	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_2_AGS_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	44427	44552	0.992	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_2_AGS_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	44089	44151	0.984	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_2_AGS_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	41198	41493	0.990	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_2_AGS_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	37706	37882	.	+	0	ID=GTH_SGN_U_tom_gene_3
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	37706	37882	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	37706	37882	0.944	+	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	39187	39900	.	+	0	ID=GTH_SGN_U_tom_gene_4
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	39187	39900	.	+	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	39187	39900	0.923	+	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	82653	84314	.	+	0	ID=GTH_SGN_U_tom_gene_5
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	82653	84314	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	82653	84314	0.936	+	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	84392	87031	.	-	0	ID=GTH_SGN_U_tom_gene_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	84392	87031	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	84392	87031	0.910	-	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	88336	88512	.	-	0	ID=GTH_SGN_U_tom_gene_7
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	88336	88512	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	88336	88512	0.938	-	0	ID=GTH_SGN_U_tom_exon_32;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	gene	90463	90799	.	-	0	ID=GTH_SGN_U_tom_gene_8
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	mRNA	90463	90799	.	-	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C04SLm0096N24.1	GenomeThreader_SGN_U_tomato	exon	90463	90799	0.917	-	0	ID=GTH_SGN_U_tom_exon_33;Parent=GTH_SGN_U_tom_gene_8_AGS_1