##gff-version 3
##sequence-region C03HBa0295I12.1 1 31852
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	751	3242	0.944	-	0	ID=SGN-E580260_alignment_1;Target=SGN-E580260 1 354 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	3117	3242	0.897	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E580260 1 125 +;Parent=SGN-E580260_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	2192	2276	0.953	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E580260 126 209 +;Parent=SGN-E580260_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	1051	1118	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E580260 210 277 +;Parent=SGN-E580260_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	751	827	0.961	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E580260 278 354 +;Parent=SGN-E580260_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	4807	6556	0.989	-	0	ID=SGN-E577733_alignment_1;Target=SGN-E577733 1 721 -
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6182	6556	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E577733 1 374 -;Parent=SGN-E577733_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6005	6061	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E577733 375 431 -;Parent=SGN-E577733_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	4807	5097	0.979	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E577733 432 721 -;Parent=SGN-E577733_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	4812	6207	0.913	-	0	ID=SGN-E577270_alignment_1;Target=SGN-E577270 1 377 -
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6182	6207	0.923	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E577270 1 27 -;Parent=SGN-E577270_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6005	6061	0.842	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E577270 28 88 -;Parent=SGN-E577270_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	4812	5097	0.927	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E577270 89 377 -;Parent=SGN-E577270_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	5700	6702	0.992	-	0	ID=SGN-E368134_alignment_1;Target=SGN-E368134 1 686 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6664	6702	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E368134 1 39 +;Parent=SGN-E368134_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E368134 40 324 +;Parent=SGN-E368134_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	5700	6061	0.986	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E368134 325 686 +;Parent=SGN-E368134_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	5871	7355	1.000	-	0	ID=SGN-E368135_alignment_1;Target=SGN-E368135 1 694 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	7276	7355	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E368135 1 80 +;Parent=SGN-E368135_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E368135 81 218 +;Parent=SGN-E368135_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E368135 219 503 +;Parent=SGN-E368135_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	5871	6061	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E368135 504 694 +;Parent=SGN-E368135_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	6296	7355	1.000	-	0	ID=SGN-E238436_alignment_1;Target=SGN-E238436 1 389 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	7276	7355	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E238436 1 80 +;Parent=SGN-E238436_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E238436 81 218 +;Parent=SGN-E238436_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6296	6466	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E238436 219 389 +;Parent=SGN-E238436_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	6316	7427	0.975	-	0	ID=SGN-E238862_alignment_1;Target=SGN-E238862 1 441 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	7276	7427	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E238862 1 152 +;Parent=SGN-E238862_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E238862 153 290 +;Parent=SGN-E238862_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6316	6466	0.927	-	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E238862 291 441 +;Parent=SGN-E238862_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	6358	7545	1.000	-	0	ID=SGN-E318749_alignment_1;Target=SGN-E318749 1 517 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	7276	7545	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E318749 1 270 +;Parent=SGN-E318749_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E318749 271 408 +;Parent=SGN-E318749_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	6358	6466	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E318749 409 517 +;Parent=SGN-E318749_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	8065	11661	0.914	-	0	ID=SGN-E570045_alignment_1;Target=SGN-E570045 28 603 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	11492	11661	0.918	-	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E570045 28 188 +;Parent=SGN-E570045_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	11032	11168	0.964	-	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E570045 189 325 +;Parent=SGN-E570045_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	9623	9797	0.949	-	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E570045 326 500 +;Parent=SGN-E570045_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	9414	9475	0.694	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E570045 501 568 +;Parent=SGN-E570045_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	8065	8097	0.879	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E570045 569 603 +;Parent=SGN-E570045_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	13515	14073	0.993	-	0	ID=SGN-E256759_alignment_1;Target=SGN-E256759 1 561 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	13515	14073	0.993	-	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E256759 1 561 +;Parent=SGN-E256759_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	13692	14074	0.987	-	0	ID=SGN-E262543_alignment_1;Target=SGN-E262543 1 384 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	13692	14074	0.987	-	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E262543 1 384 +;Parent=SGN-E262543_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	13773	14074	1.000	-	0	ID=SGN-E261312_alignment_1;Target=SGN-E261312 1 302 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	13773	14074	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E261312 1 302 +;Parent=SGN-E261312_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	13802	14074	0.996	-	0	ID=SGN-E258087_alignment_1;Target=SGN-E258087 1 273 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	13802	14074	0.996	-	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E258087 1 273 +;Parent=SGN-E258087_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	14396	14948	1.000	-	0	ID=SGN-E331706_alignment_1;Target=SGN-E331706 1 553 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	14396	14948	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E331706 1 553 +;Parent=SGN-E331706_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19756	28553	0.999	+	0	ID=SGN-E746212_alignment_1;Target=SGN-E746212 1 2422 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19756	20664	0.999	+	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E746212 1 909 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E746212 910 1119 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23818	24318	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E746212 1120 1620 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E746212 1621 1695 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	25110	25188	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E746212 1696 1774 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	26474	26538	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E746212 1775 1839 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	27041	27076	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E746212 1840 1875 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	27157	27383	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E746212 1876 2102 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	28234	28553	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E746212 2103 2422 +;Parent=SGN-E746212_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19765	20452	0.911	+	0	ID=SGN-E446713_alignment_1;Target=SGN-E446713 1 656 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19765	20452	0.911	+	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E446713 1 656 +;Parent=SGN-E446713_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19775	20351	1.000	+	0	ID=SGN-E330971_alignment_1;Target=SGN-E330971 1 577 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19775	20351	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E330971 1 577 +;Parent=SGN-E330971_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19775	20130	0.972	+	0	ID=SGN-E281782_alignment_1;Target=SGN-E281782 1 356 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19775	20130	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E281782 1 356 +;Parent=SGN-E281782_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19778	20401	0.987	+	0	ID=SGN-E544643_alignment_1;Target=SGN-E544643 1 624 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19778	20401	0.987	+	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E544643 1 624 +;Parent=SGN-E544643_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19779	20351	0.998	+	0	ID=SGN-E305953_alignment_1;Target=SGN-E305953 1 573 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19779	20351	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E305953 1 573 +;Parent=SGN-E305953_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	19786	20287	1.000	+	0	ID=SGN-E317183_alignment_1;Target=SGN-E317183 1 502 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19786	20287	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E317183 1 502 +;Parent=SGN-E317183_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	20536	23930	1.000	+	0	ID=SGN-E341081_alignment_1;Target=SGN-E341081 1 452 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20536	20664	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_52;Target=SGN-E341081 1 129 +;Parent=SGN-E341081_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_53;Target=SGN-E341081 130 339 +;Parent=SGN-E341081_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23818	23930	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_54;Target=SGN-E341081 340 452 +;Parent=SGN-E341081_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	21156	25148	0.996	+	0	ID=SGN-E728078_alignment_1;Target=SGN-E728078 1 820 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	21156	21360	0.985	+	0	ID=GTH_SGN_E_tom_potato_match_part_55;Target=SGN-E728078 1 205 +;Parent=SGN-E728078_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23818	24318	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_56;Target=SGN-E728078 206 706 +;Parent=SGN-E728078_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_57;Target=SGN-E728078 707 781 +;Parent=SGN-E728078_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	25110	25148	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_58;Target=SGN-E728078 782 820 +;Parent=SGN-E728078_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	23984	24293	0.997	+	0	ID=SGN-E305213_alignment_1;Target=SGN-E305213 1 310 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23984	24293	0.997	+	0	ID=GTH_SGN_E_tom_potato_match_part_59;Target=SGN-E305213 1 310 +;Parent=SGN-E305213_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	26990	27592	0.946	+	0	ID=SGN-E582714_alignment_1;Target=SGN-E582714 1 521 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	26990	27076	0.966	+	0	ID=GTH_SGN_E_tom_potato_match_part_60;Target=SGN-E582714 1 87 +;Parent=SGN-E582714_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	27157	27592	0.943	+	0	ID=GTH_SGN_E_tom_potato_match_part_61;Target=SGN-E582714 88 521 +;Parent=SGN-E582714_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	27178	28538	0.996	+	0	ID=SGN-E549076_alignment_1;Target=SGN-E549076 1 511 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	27178	27383	0.995	+	0	ID=GTH_SGN_E_tom_potato_match_part_62;Target=SGN-E549076 1 206 +;Parent=SGN-E549076_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	28234	28538	0.997	+	0	ID=GTH_SGN_E_tom_potato_match_part_63;Target=SGN-E549076 207 511 +;Parent=SGN-E549076_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	30550	31286	0.996	+	0	ID=SGN-E689147_alignment_1;Target=SGN-E689147 1 738 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30550	31286	0.996	+	0	ID=GTH_SGN_E_tom_potato_match_part_64;Target=SGN-E689147 1 738 +;Parent=SGN-E689147_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	30552	30922	0.970	+	0	ID=SGN-E323417_alignment_1;Target=SGN-E323417 1 370 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30552	30922	0.970	+	0	ID=GTH_SGN_E_tom_potato_match_part_65;Target=SGN-E323417 1 370 +;Parent=SGN-E323417_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	31185	31852	0.993	-	0	ID=SGN-E379783_alignment_1;Target=SGN-E379783 7 674 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	31185	31852	0.993	-	0	ID=GTH_SGN_E_tom_potato_match_part_66;Target=SGN-E379783 7 674 +;Parent=SGN-E379783_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	31301	31852	0.998	-	0	ID=SGN-E208863_alignment_1;Target=SGN-E208863 7 558 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	31301	31852	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_67;Target=SGN-E208863 7 558 +;Parent=SGN-E208863_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	31338	31852	0.977	+	0	ID=SGN-E395297_alignment_1;Target=SGN-E395297 1 515 -
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	31338	31852	0.977	+	0	ID=GTH_SGN_E_tom_potato_match_part_68;Target=SGN-E395297 1 515 -;Parent=SGN-E395297_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match	31382	31852	1.000	+	0	ID=SGN-E354207_alignment_1;Target=SGN-E354207 1 471 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	match_part	31382	31852	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_69;Target=SGN-E354207 1 471 +;Parent=SGN-E354207_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	751	3242	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	751	3242	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	3117	3242	0.897	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	2192	2276	0.953	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	1051	1118	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	751	827	0.961	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	4807	7545	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	5700	7545	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	7276	7545	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	5700	6061	0.986	-	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	4807	6556	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	6182	6556	0.995	-	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	6005	6061	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	4807	5097	0.979	-	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	8065	11661	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	8065	11661	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	11492	11661	0.918	-	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	11032	11168	0.964	-	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	9623	9797	0.949	-	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	9414	9475	0.694	-	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	8065	8097	0.879	-	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	13515	14074	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	13515	14074	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	13515	14074	0.993	-	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	14396	14948	.	-	0	ID=GTH_SGN_E_tom_potato_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	14396	14948	.	-	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	14396	14948	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	19756	28553	.	+	0	ID=GTH_SGN_E_tom_potato_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	19756	28553	.	+	0	ID=GTH_SGN_E_tom_potato_gene_6_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	19756	20664	0.999	+	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	23818	24318	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_22;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	25110	25188	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_23;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	26474	26538	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_24;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	27041	27076	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_25;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	27157	27383	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_26;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	28234	28553	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_27;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	26990	27592	.	+	0	ID=GTH_SGN_E_tom_potato_gene_6_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	26990	27076	0.966	+	0	ID=GTH_SGN_E_tom_potato_exon_28;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	27157	27592	0.943	+	0	ID=GTH_SGN_E_tom_potato_exon_29;Parent=GTH_SGN_E_tom_potato_gene_6_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	30550	31286	.	+	0	ID=GTH_SGN_E_tom_potato_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	30550	31286	.	+	0	ID=GTH_SGN_E_tom_potato_gene_7_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	30550	31286	0.996	+	0	ID=GTH_SGN_E_tom_potato_exon_30;Parent=GTH_SGN_E_tom_potato_gene_7_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	31185	31852	.	-	0	ID=GTH_SGN_E_tom_potato_gene_8
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	31185	31852	.	-	0	ID=GTH_SGN_E_tom_potato_gene_8_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_8
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	31185	31852	0.993	-	0	ID=GTH_SGN_E_tom_potato_exon_31;Parent=GTH_SGN_E_tom_potato_gene_8_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	gene	31338	31852	.	+	0	ID=GTH_SGN_E_tom_potato_gene_9
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	31338	31852	.	+	0	ID=GTH_SGN_E_tom_potato_gene_9_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_9
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato_potato	exon	31338	31852	0.977	+	0	ID=GTH_SGN_E_tom_potato_exon_32;Parent=GTH_SGN_E_tom_potato_gene_9_AGS_1
C03HBa0295I12.1	RepeatMasker	nucleotide_motif	11194	11293	384	-	0	ID=TS2_alignment_1;Target=TS2 539 650 -
C03HBa0295I12.1	RepeatMasker	nucleotide_motif	12747	12821	251	-	0	ID=HarbN_I_alignment_1;Target=HarbN_I 79 151 -
C03HBa0295I12.1	RepeatMasker	nucleotide_motif	17667	17760	812	+	0	ID=Copia00124_alignment_1;Target=Copia00124 2413 2506 +
C03HBa0295I12.1	RepeatMasker	nucleotide_motif	23386	23513	473	+	0	ID=Copia00172_alignment_1;Target=Copia00172 376 516 +
C03HBa0295I12.1	RepeatMasker	nucleotide_motif	26685	26729	226	+	0	ID=Copia00113_alignment_1;Target=Copia00113 7230 7274 +
C03HBa0295I12.1	BLAST_tomato_chloroplast	match	17593	17977	660	+	0	ID=gi|113531108|emb|AM087200.3|_rev_alignment_1;blast_gaps=0;Target=gi|113531108|emb|AM087200.3| 144517 144901 -;blast_match_length=384;blast_percent_identity=96.62;blast_mismatches=13;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_chloroplast	match	17593	17977	660	+	0	ID=gi|113531108|emb|AM087200.3|_fwd_alignment_1;blast_gaps=0;Target=gi|113531108|emb|AM087200.3| 96443 96827 +;blast_match_length=384;blast_percent_identity=96.62;blast_mismatches=13;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_chloroplast	match	16927	17595	1130	+	0	ID=gi|113531108|emb|AM087200.3|_rev_alignment_2;blast_gaps=2;Target=gi|113531108|emb|AM087200.3| 78943 79609 -;blast_match_length=668;blast_percent_identity=97.91;blast_mismatches=12;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	16878	18082	2300	+	0	ID=C03HBa0159C06.1_rev_alignment_1;blast_gaps=0;Target=clone-C03HBa0159C06.1 120698 121902 -;blast_match_length=1204;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	18861	20078	2415	+	0	ID=C03HBa0159C06.1_rev_alignment_2;blast_gaps=0;Target=clone-C03HBa0159C06.1 118702 119919 -;blast_match_length=1217;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	30123	31673	2962	+	0	ID=C03HBa0159C06.1_rev_alignment_3;blast_gaps=0;Target=clone-C03HBa0159C06.1 107107 108657 -;blast_match_length=1550;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	9773	11567	3362	+	0	ID=C03HBa0159C06.1_rev_alignment_4;blast_gaps=0;Target=clone-C03HBa0159C06.1 127213 129007 -;blast_match_length=1794;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	20793	24059	6203	+	0	ID=C03HBa0159C06.1_rev_alignment_5;blast_gaps=0;Target=clone-C03HBa0159C06.1 114721 117987 -;blast_match_length=3266;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	1	3616	6829	+	0	ID=C03HBa0159C06.1_rev_alignment_6;blast_gaps=0;Target=clone-C03HBa0159C06.1 136502 140117 -;blast_match_length=3615;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	11629	15640	7787	+	0	ID=C03HBa0159C06.1_rev_alignment_7;blast_gaps=0;Target=clone-C03HBa0159C06.1 123140 127151 -;blast_match_length=4011;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	3683	8941	9908	+	0	ID=C03HBa0159C06.1_rev_alignment_8;blast_gaps=0;Target=clone-C03HBa0159C06.1 131177 136435 -;blast_match_length=5258;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	24148	30017	1.090e+04	+	0	ID=C03HBa0159C06.1_rev_alignment_9;blast_gaps=0;Target=clone-C03HBa0159C06.1 108763 114632 -;blast_match_length=5869;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bacs	match	1	1150	2238	+	0	ID=C03HBa0192B12.1_rev_alignment_1;blast_gaps=0;Target=clone-C03HBa0192B12.1 1 1150 -;blast_match_length=1149;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	18	726	1405	+	0	ID=C03HBa0295I12.1-LE_HBa0094F12_SP6_27526_1;blast_gaps=0;Target=LE_HBa0094F12_SP6_27526 5 713 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	32	732	1390	+	0	ID=C03HBa0295I12.1-LE_HBa0159C06_SP6_261401_1;blast_gaps=0;Target=LE_HBa0159C06_SP6_261401 8 708 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	35	642	1150	+	0	ID=C03HBa0295I12.1-LE_HBa0159D06_SP6_261443_1;blast_gaps=0;Target=LE_HBa0159D06_SP6_261443 1 608 +;is_problematic=0;blast_percent_identity=98.85;blast_mismatches=7;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	468	1149	1302	-	0	ID=C03HBa0295I12.1-LE_HBa0192B12_T7_107975_1;blast_gaps=0;Target=LE_HBa0192B12_T7_107975 1 682 +;is_problematic=0;blast_percent_identity=99.85;blast_mismatches=1;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	4599	5169	1090	+	0	ID=C03HBa0295I12.1-SL_MboI0037J04_SP6_281766_1;blast_gaps=0;Target=SL_MboI0037J04_SP6_281766 1 571 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	5779	6006	436	-	0	ID=C03HBa0295I12.1-SL_EcoRI0009O23_T7_227274_1;blast_gaps=0;Target=SL_EcoRI0009O23_T7_227274 1 228 +;is_problematic=0;blast_percent_identity=99.12;blast_mismatches=2;blast_evalue=3e-119
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	9745	10428	1308	+	0	ID=C03HBa0295I12.1-LE_HBa0107I20_SP6_267441_1;blast_gaps=0;Target=LE_HBa0107I20_SP6_267441 21 704 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	11669	12255	1122	-	0	ID=C03HBa0295I12.1-SL_FOS0090G19_pIBF_510690_1;blast_gaps=0;Target=SL_FOS0090G19_pIBF_510690 2 588 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	13131	13622	944	-	0	ID=C03HBa0295I12.1-SL_EcoRI0053O15_T7_246637_1;blast_gaps=1;Target=SL_EcoRI0053O15_T7_246637 1 491 +;is_problematic=0;blast_percent_identity=99.39;blast_mismatches=2;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	13941	14730	1542	+	0	ID=C03HBa0295I12.1-SL_EcoRI0124B24_T7_329939_1;blast_gaps=0;Target=SL_EcoRI0124B24_T7_329939 2 791 +;is_problematic=0;blast_percent_identity=99.62;blast_mismatches=3;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	22394	23085	1229	+	0	ID=C03HBa0295I12.1-SL_FOS0175L23_pIBR_534837_1;blast_gaps=0;Target=SL_FOS0175L23_pIBR_534837 3 694 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	22442	23171	1273	+	0	ID=C03HBa0295I12.1-LE_HBa0174L04_T7_202892_1;blast_gaps=0;Target=LE_HBa0174L04_T7_202892 1 730 +;is_problematic=0;blast_percent_identity=99.45;blast_mismatches=4;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	25765	26205	829	+	0	ID=C03HBa0295I12.1-LE_HBa0169F12_T7_13914_1;blast_gaps=1;Target=LE_HBa0169F12_T7_13914 1 442 +;is_problematic=0;blast_percent_identity=98.87;blast_mismatches=4;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_start	26861	27455	1179	-	0	ID=C03HBa0295I12.1-SL_FOS0040B12_pIBF_433764_1;blast_gaps=0;Target=SL_FOS0040B12_pIBF_433764 2 596 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	31475	31673	394	+	0	ID=C03HBa0295I12.1-SL_EcoRI0132A09_SP6_335612_1;blast_gaps=0;Target=SL_EcoRI0132A09_SP6_335612 8 206 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=1e-106
C03HBa0295I12.1	BLAST_tomato_bac_ends	clone_end	31478	31673	365	+	0	ID=C03HBa0295I12.1-SL_EcoRI0094H11_SP6_357464_1;blast_gaps=0;Target=SL_EcoRI0094H11_SP6_357464 1 196 +;is_problematic=0;blast_percent_identity=98.47;blast_mismatches=3;blast_evalue=9e-98
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	4807	6556	0.989	-	0	ID=SGN-E577733_alignment_2;Target=SGN-E577733 1 721 -
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6182	6556	0.995	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E577733 1 374 -;Parent=SGN-E577733_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6005	6061	1.000	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E577733 375 431 -;Parent=SGN-E577733_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	4807	5097	0.979	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E577733 432 721 -;Parent=SGN-E577733_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	5700	6702	0.992	-	0	ID=SGN-E368134_alignment_2;Target=SGN-E368134 1 686 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6664	6702	1.000	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E368134 1 39 +;Parent=SGN-E368134_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E368134 40 324 +;Parent=SGN-E368134_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	5700	6061	0.986	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E368134 325 686 +;Parent=SGN-E368134_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	5871	7355	1.000	-	0	ID=SGN-E368135_alignment_2;Target=SGN-E368135 1 694 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	7276	7355	1.000	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E368135 1 80 +;Parent=SGN-E368135_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E368135 81 218 +;Parent=SGN-E368135_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E368135 219 503 +;Parent=SGN-E368135_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	5871	6061	1.000	-	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E368135 504 694 +;Parent=SGN-E368135_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	6296	7355	1.000	-	0	ID=SGN-E238436_alignment_2;Target=SGN-E238436 1 389 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	7276	7355	1.000	-	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E238436 1 80 +;Parent=SGN-E238436_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E238436 81 218 +;Parent=SGN-E238436_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6296	6466	1.000	-	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E238436 219 389 +;Parent=SGN-E238436_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	6316	7427	0.975	-	0	ID=SGN-E238862_alignment_2;Target=SGN-E238862 1 441 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	7276	7427	1.000	-	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E238862 1 152 +;Parent=SGN-E238862_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E238862 153 290 +;Parent=SGN-E238862_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6316	6466	0.927	-	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E238862 291 441 +;Parent=SGN-E238862_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	6358	7545	1.000	-	0	ID=SGN-E318749_alignment_2;Target=SGN-E318749 1 517 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	7276	7545	1.000	-	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E318749 1 270 +;Parent=SGN-E318749_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E318749 271 408 +;Parent=SGN-E318749_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	6358	6466	1.000	-	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E318749 409 517 +;Parent=SGN-E318749_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	13515	14073	0.993	-	0	ID=SGN-E256759_alignment_2;Target=SGN-E256759 1 561 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	13515	14073	0.993	-	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E256759 1 561 +;Parent=SGN-E256759_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	13692	14074	0.987	-	0	ID=SGN-E262543_alignment_2;Target=SGN-E262543 1 384 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	13692	14074	0.987	-	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E262543 1 384 +;Parent=SGN-E262543_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	13773	14074	1.000	-	0	ID=SGN-E261312_alignment_2;Target=SGN-E261312 1 302 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	13773	14074	1.000	-	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E261312 1 302 +;Parent=SGN-E261312_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	13802	14074	0.996	-	0	ID=SGN-E258087_alignment_2;Target=SGN-E258087 1 273 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	13802	14074	0.996	-	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E258087 1 273 +;Parent=SGN-E258087_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	14396	14948	1.000	-	0	ID=SGN-E331706_alignment_2;Target=SGN-E331706 1 553 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	14396	14948	1.000	-	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E331706 1 553 +;Parent=SGN-E331706_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19756	28553	0.999	+	0	ID=SGN-E746212_alignment_2;Target=SGN-E746212 1 2422 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19756	20664	0.999	+	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E746212 1 909 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E746212 910 1119 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	23818	24318	0.998	+	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E746212 1120 1620 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E746212 1621 1695 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	25110	25188	1.000	+	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E746212 1696 1774 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	26474	26538	1.000	+	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E746212 1775 1839 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	27041	27076	1.000	+	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E746212 1840 1875 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	27157	27383	1.000	+	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E746212 1876 2102 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	28234	28553	1.000	+	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E746212 2103 2422 +;Parent=SGN-E746212_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19775	20351	1.000	+	0	ID=SGN-E330971_alignment_2;Target=SGN-E330971 1 577 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19775	20351	1.000	+	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E330971 1 577 +;Parent=SGN-E330971_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19775	20130	0.972	+	0	ID=SGN-E281782_alignment_2;Target=SGN-E281782 1 356 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19775	20130	0.972	+	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E281782 1 356 +;Parent=SGN-E281782_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19778	20401	0.987	+	0	ID=SGN-E544643_alignment_2;Target=SGN-E544643 1 624 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19778	20401	0.987	+	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E544643 1 624 +;Parent=SGN-E544643_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19779	20351	0.998	+	0	ID=SGN-E305953_alignment_2;Target=SGN-E305953 1 573 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19779	20351	0.998	+	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E305953 1 573 +;Parent=SGN-E305953_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	19786	20287	1.000	+	0	ID=SGN-E317183_alignment_2;Target=SGN-E317183 1 502 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	19786	20287	1.000	+	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E317183 1 502 +;Parent=SGN-E317183_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	20536	23930	1.000	+	0	ID=SGN-E341081_alignment_2;Target=SGN-E341081 1 452 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	20536	20664	1.000	+	0	ID=GTH_SGN_E_tom_match_part_39;Target=SGN-E341081 1 129 +;Parent=SGN-E341081_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_match_part_40;Target=SGN-E341081 130 339 +;Parent=SGN-E341081_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	23818	23930	1.000	+	0	ID=GTH_SGN_E_tom_match_part_41;Target=SGN-E341081 340 452 +;Parent=SGN-E341081_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	21156	25148	0.996	+	0	ID=SGN-E728078_alignment_2;Target=SGN-E728078 1 820 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	21156	21360	0.985	+	0	ID=GTH_SGN_E_tom_match_part_42;Target=SGN-E728078 1 205 +;Parent=SGN-E728078_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	23818	24318	1.000	+	0	ID=GTH_SGN_E_tom_match_part_43;Target=SGN-E728078 206 706 +;Parent=SGN-E728078_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_match_part_44;Target=SGN-E728078 707 781 +;Parent=SGN-E728078_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	25110	25148	1.000	+	0	ID=GTH_SGN_E_tom_match_part_45;Target=SGN-E728078 782 820 +;Parent=SGN-E728078_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	23984	24293	0.997	+	0	ID=SGN-E305213_alignment_2;Target=SGN-E305213 1 310 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	23984	24293	0.997	+	0	ID=GTH_SGN_E_tom_match_part_46;Target=SGN-E305213 1 310 +;Parent=SGN-E305213_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	27178	28538	0.996	+	0	ID=SGN-E549076_alignment_2;Target=SGN-E549076 1 511 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	27178	27383	0.995	+	0	ID=GTH_SGN_E_tom_match_part_47;Target=SGN-E549076 1 206 +;Parent=SGN-E549076_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	28234	28538	0.997	+	0	ID=GTH_SGN_E_tom_match_part_48;Target=SGN-E549076 207 511 +;Parent=SGN-E549076_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	30550	31286	0.996	+	0	ID=SGN-E689147_alignment_2;Target=SGN-E689147 1 738 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	30550	31286	0.996	+	0	ID=GTH_SGN_E_tom_match_part_49;Target=SGN-E689147 1 738 +;Parent=SGN-E689147_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	30552	30922	0.970	+	0	ID=SGN-E323417_alignment_2;Target=SGN-E323417 1 370 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	30552	30922	0.970	+	0	ID=GTH_SGN_E_tom_match_part_50;Target=SGN-E323417 1 370 +;Parent=SGN-E323417_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	31185	31852	0.993	-	0	ID=SGN-E379783_alignment_2;Target=SGN-E379783 7 674 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	31185	31852	0.993	-	0	ID=GTH_SGN_E_tom_match_part_51;Target=SGN-E379783 7 674 +;Parent=SGN-E379783_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	31301	31852	0.998	-	0	ID=SGN-E208863_alignment_2;Target=SGN-E208863 7 558 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	31301	31852	0.998	-	0	ID=GTH_SGN_E_tom_match_part_52;Target=SGN-E208863 7 558 +;Parent=SGN-E208863_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	31338	31852	0.977	+	0	ID=SGN-E395297_alignment_2;Target=SGN-E395297 1 515 -
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	31338	31852	0.977	+	0	ID=GTH_SGN_E_tom_match_part_53;Target=SGN-E395297 1 515 -;Parent=SGN-E395297_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match	31382	31852	1.000	+	0	ID=SGN-E354207_alignment_2;Target=SGN-E354207 1 471 +
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	match_part	31382	31852	1.000	+	0	ID=GTH_SGN_E_tom_match_part_54;Target=SGN-E354207 1 471 +;Parent=SGN-E354207_alignment_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	4807	7545	.	-	0	ID=GTH_SGN_E_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	5700	7545	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	7276	7545	1.000	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	6664	6801	1.000	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	6182	6466	1.000	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	5700	6061	0.986	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	4807	6556	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_2;Parent=GTH_SGN_E_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	6182	6556	0.995	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	6005	6061	1.000	-	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	4807	5097	0.979	-	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	13515	14074	.	-	0	ID=GTH_SGN_E_tom_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	13515	14074	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	13515	14074	0.993	-	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	14396	14948	.	-	0	ID=GTH_SGN_E_tom_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	14396	14948	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	14396	14948	1.000	-	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	19756	28553	.	+	0	ID=GTH_SGN_E_tom_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	19756	28553	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	19756	20664	0.999	+	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	21151	21360	1.000	+	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	23818	24318	1.000	+	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	24786	24860	1.000	+	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	25110	25188	1.000	+	0	ID=GTH_SGN_E_tom_exon_14;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	26474	26538	1.000	+	0	ID=GTH_SGN_E_tom_exon_15;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	27041	27076	1.000	+	0	ID=GTH_SGN_E_tom_exon_16;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	27157	27383	1.000	+	0	ID=GTH_SGN_E_tom_exon_17;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	28234	28553	1.000	+	0	ID=GTH_SGN_E_tom_exon_18;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	30550	31286	.	+	0	ID=GTH_SGN_E_tom_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	30550	31286	.	+	0	ID=GTH_SGN_E_tom_gene_5_AGS_1;Parent=GTH_SGN_E_tom_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	30550	31286	0.996	+	0	ID=GTH_SGN_E_tom_exon_19;Parent=GTH_SGN_E_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	31185	31852	.	-	0	ID=GTH_SGN_E_tom_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	31185	31852	.	-	0	ID=GTH_SGN_E_tom_gene_6_AGS_1;Parent=GTH_SGN_E_tom_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	31185	31852	0.993	-	0	ID=GTH_SGN_E_tom_exon_20;Parent=GTH_SGN_E_tom_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	gene	31338	31852	.	+	0	ID=GTH_SGN_E_tom_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	mRNA	31338	31852	.	+	0	ID=GTH_SGN_E_tom_gene_7_AGS_1;Parent=GTH_SGN_E_tom_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_E_tomato	exon	31338	31852	0.977	+	0	ID=GTH_SGN_E_tom_exon_21;Parent=GTH_SGN_E_tom_gene_7_AGS_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	gene	751	2261	0.6	-	.	ID=g1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	transcript	751	2261	0.6	-	.	ID=g1.t1_1;Parent=g1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	1	750	0.61	-	.	Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	828	1050	1	-	.	Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	1119	2191	1	-	.	Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	751	827	0.82	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	1051	1118	1	-	2	ID=g1.t1.cds_2;Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	2192	2261	0.99	-	0	ID=g1.t1.cds_3;Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	start_codon	2259	2261	.	-	0	Parent=g1.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	gene	4924	11139	0.67	-	.	ID=g2_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	transcript	4924	11139	0.67	-	.	ID=g2.t1_1;Parent=g2_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	stop_codon	4924	4926	.	-	0	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	5098	6004	1	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	6062	6181	1	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	6467	6663	1	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	6802	7275	1	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	8098	9413	0.88	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	9476	9622	0.92	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	9798	11031	1	-	.	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	4924	5097	0.93	-	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	6005	6061	1	-	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	6182	6466	1	-	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	6664	6801	1	-	0	ID=g2.t1.cds_4;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	7276	8097	0.89	-	0	ID=g2.t1.cds_5;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	9414	9475	0.92	-	2	ID=g2.t1.cds_6;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	9623	9797	0.94	-	0	ID=g2.t1.cds_7;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	11032	11139	0.9	-	0	ID=g2.t1.cds_8;Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	start_codon	11137	11139	.	-	0	Parent=g2.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	gene	19876	27330	0.97	+	.	ID=g3_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	transcript	19876	27330	0.97	+	.	ID=g3.t1_1;Parent=g3_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	start_codon	19876	19878	.	+	0	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	20665	21150	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	21361	23817	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	24319	24785	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	24861	25109	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	25189	26473	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	26539	27040	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	intron	27077	27156	1	+	.	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	19876	20664	0.97	+	0	ID=g3.t1.cds_1;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	21151	21360	1	+	0	ID=g3.t1.cds_2;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	23818	24318	1	+	0	ID=g3.t1.cds_3;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	24786	24860	1	+	0	ID=g3.t1.cds_4;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	25110	25188	1	+	0	ID=g3.t1.cds_5;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	26474	26538	1	+	2	ID=g3.t1.cds_6;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	27041	27076	1	+	0	ID=g3.t1.cds_7;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	27157	27330	1	+	0	ID=g3.t1.cds_8;Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	stop_codon	27328	27330	.	+	0	Parent=g3.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	gene	30666	31757	1	+	.	ID=g4_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	transcript	30666	31757	1	+	.	ID=g4.t1_1;Parent=g4_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	start_codon	30666	30668	.	+	0	Parent=g4.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	CDS	30666	31757	1	+	0	ID=g4.t1.cds_1;Parent=g4.t1_1
C03HBa0295I12.1	AUGUSTUS_tom_cdna	stop_codon	31755	31757	.	+	0	Parent=g4.t1_1
C03HBa0295I12.1	AUGUSTUS_ab_initio	gene	629	2261	0.16	-	.	ID=g1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	transcript	629	2261	0.16	-	.	ID=g1.t1_2;Parent=g1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	stop_codon	629	631	.	-	0	Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	687	750	0.46	-	.	Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	828	1050	0.97	-	.	Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	1119	2146	0.48	-	.	Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	629	686	0.4	-	1	ID=g1.t1.cds_4;Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	751	827	0.91	-	0	ID=g1.t1.cds_5;Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	1051	1118	0.98	-	2	ID=g1.t1.cds_6;Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	2147	2261	0.58	-	0	ID=g1.t1.cds_7;Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	start_codon	2259	2261	.	-	0	Parent=g1.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	gene	4924	12971	0.05	-	.	ID=g2_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	transcript	4924	12971	0.05	-	.	ID=g2.t1_2;Parent=g2_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	stop_codon	4924	4926	.	-	0	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	5098	6004	0.98	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	6062	6181	0.99	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	6467	6663	0.86	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	6802	7275	0.85	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	8098	9413	0.8	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	9476	9622	0.91	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	9798	11031	0.99	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	11169	11491	0.86	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	11534	12233	0.32	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	12260	12924	0.16	-	.	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	4924	5097	0.69	-	0	ID=g2.t1.cds_9;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	6005	6061	0.99	-	0	ID=g2.t1.cds_10;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	6182	6466	0.91	-	0	ID=g2.t1.cds_11;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	6664	6801	0.96	-	0	ID=g2.t1.cds_12;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	7276	8097	0.8	-	0	ID=g2.t1.cds_13;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	9414	9475	0.91	-	2	ID=g2.t1.cds_14;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	9623	9797	0.92	-	0	ID=g2.t1.cds_15;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	11032	11168	0.89	-	2	ID=g2.t1.cds_16;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	11492	11533	0.93	-	2	ID=g2.t1.cds_17;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	12234	12259	0.16	-	1	ID=g2.t1.cds_18;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	12925	12971	0.38	-	0	ID=g2.t1.cds_19;Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	start_codon	12969	12971	.	-	0	Parent=g2.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	gene	19876	28345	0.07	+	.	ID=g3_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	transcript	19876	28345	0.07	+	.	ID=g3.t1_2;Parent=g3_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	start_codon	19876	19878	.	+	0	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	20665	21150	0.89	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	21361	23817	0.94	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	24319	24785	1	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	24861	25109	0.83	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	25189	26473	0.62	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	26539	26760	0.82	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	26815	27040	0.76	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	27077	27156	0.95	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	intron	27324	28233	0.35	+	.	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	19876	20664	0.89	+	0	ID=g3.t1.cds_9;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	21151	21360	0.85	+	0	ID=g3.t1.cds_10;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	23818	24318	1	+	0	ID=g3.t1.cds_11;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	24786	24860	0.83	+	0	ID=g3.t1.cds_12;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	25110	25188	1	+	0	ID=g3.t1.cds_13;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	26474	26538	0.91	+	2	ID=g3.t1.cds_14;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	26761	26814	0.78	+	0	ID=g3.t1.cds_15;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	27041	27076	0.96	+	0	ID=g3.t1.cds_16;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	27157	27323	0.68	+	0	ID=g3.t1.cds_17;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	28234	28345	0.39	+	1	ID=g3.t1.cds_18;Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	stop_codon	28343	28345	.	+	0	Parent=g3.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	gene	30666	31757	1	+	.	ID=g4_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	transcript	30666	31757	1	+	.	ID=g4.t1_2;Parent=g4_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	start_codon	30666	30668	.	+	0	Parent=g4.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	CDS	30666	31757	1	+	0	ID=g4.t1.cds_2;Parent=g4.t1_2
C03HBa0295I12.1	AUGUSTUS_ab_initio	stop_codon	31755	31757	.	+	0	Parent=g4.t1_2
C03HBa0295I12.1	AUGUSTUS_tom_ugs	gene	751	2261	0.53	-	.	ID=g1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	transcript	751	2261	0.53	-	.	ID=g1.t1_3;Parent=g1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	1	750	0.53	-	.	Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	828	1050	1	-	.	Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	1119	2191	1	-	.	Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	751	827	0.79	-	0	ID=g1.t1.cds_8;Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	1051	1118	1	-	2	ID=g1.t1.cds_9;Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	2192	2261	1	-	0	ID=g1.t1.cds_10;Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	start_codon	2259	2261	.	-	0	Parent=g1.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	gene	4924	11139	0.73	-	.	ID=g2_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	transcript	4924	11139	0.73	-	.	ID=g2.t1_3;Parent=g2_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	stop_codon	4924	4926	.	-	0	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	5098	6004	1	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	6062	6181	1	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	6467	6663	1	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	6802	7275	0.96	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	8098	9413	0.83	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	9476	9622	0.97	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	intron	9798	11031	1	-	.	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	4924	5097	1	-	0	ID=g2.t1.cds_20;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	6005	6061	1	-	0	ID=g2.t1.cds_21;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	6182	6466	1	-	0	ID=g2.t1.cds_22;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	6664	6801	0.98	-	0	ID=g2.t1.cds_23;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	7276	8097	0.84	-	0	ID=g2.t1.cds_24;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	9414	9475	0.97	-	2	ID=g2.t1.cds_25;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	9623	9797	0.97	-	0	ID=g2.t1.cds_26;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	11032	11139	0.94	-	0	ID=g2.t1.cds_27;Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	start_codon	11137	11139	.	-	0	Parent=g2.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	gene	16900	17184	0.77	-	.	ID=g3_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	transcript	16900	17184	0.77	-	.	ID=g3.t1_3;Parent=g3_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	stop_codon	16900	16902	.	-	0	Parent=g3.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	16900	17184	0.77	-	0	ID=g3.t1.cds_19;Parent=g3.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	start_codon	17182	17184	.	-	0	Parent=g3.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	gene	30666	31757	1	+	.	ID=g4_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	transcript	30666	31757	1	+	.	ID=g4.t1_3;Parent=g4_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	start_codon	30666	30668	.	+	0	Parent=g4.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	CDS	30666	31757	1	+	0	ID=g4.t1.cds_3;Parent=g4.t1_3
C03HBa0295I12.1	AUGUSTUS_tom_ugs	stop_codon	31755	31757	.	+	0	Parent=g4.t1_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	4807	6556	0.989	-	0	ID=SGN-U588463_alignment_1;Target=SGN-U588463 1 721 -
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6182	6556	0.995	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U588463 1 374 -;Parent=SGN-U588463_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6005	6061	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U588463 375 431 -;Parent=SGN-U588463_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	4807	5097	0.979	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U588463 432 721 -;Parent=SGN-U588463_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	4871	7546	0.994	-	0	ID=SGN-U581912_alignment_1;Target=SGN-U581912 1 978 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	7276	7546	1.000	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U581912 1 271 +;Parent=SGN-U581912_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6664	6801	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U581912 272 409 +;Parent=SGN-U581912_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U581912 410 694 +;Parent=SGN-U581912_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6005	6061	0.982	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U581912 695 751 +;Parent=SGN-U581912_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	4871	5097	0.978	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U581912 752 978 +;Parent=SGN-U581912_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	5709	6736	0.997	-	0	ID=SGN-U588464_alignment_1;Target=SGN-U588464 1 711 -
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6664	6736	0.973	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U588464 1 73 -;Parent=SGN-U588464_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	6182	6466	1.000	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U588464 74 358 -;Parent=SGN-U588464_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	5709	6061	1.000	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U588464 359 711 -;Parent=SGN-U588464_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	7913	11759	0.987	-	0	ID=SGN-U575351_alignment_1;Target=SGN-U575351 1 823 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	11492	11759	0.996	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U575351 1 268 +;Parent=SGN-U575351_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	11032	11168	0.993	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U575351 269 405 +;Parent=SGN-U575351_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	9623	9797	0.960	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U575351 406 577 +;Parent=SGN-U575351_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	9414	9475	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U575351 578 639 +;Parent=SGN-U575351_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	7913	8097	0.989	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U575351 640 823 +;Parent=SGN-U575351_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	13533	14078	0.980	-	0	ID=SGN-U572932_alignment_1;Target=SGN-U572932 1 551 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	13533	14078	0.980	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U572932 1 551 +;Parent=SGN-U572932_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	14392	14934	1.000	-	0	ID=SGN-U599129_alignment_1;Target=SGN-U599129 1 543 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	14392	14934	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U599129 1 543 +;Parent=SGN-U599129_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	19756	28551	1.000	+	0	ID=SGN-U586233_alignment_1;Target=SGN-U586233 1 2420 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	19756	20664	0.999	+	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U586233 1 909 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	21151	21360	1.000	+	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U586233 910 1119 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	23818	24318	1.000	+	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U586233 1120 1620 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	24786	24860	1.000	+	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U586233 1621 1695 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	25110	25188	1.000	+	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U586233 1696 1774 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	26474	26538	1.000	+	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U586233 1775 1839 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	27041	27076	1.000	+	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U586233 1840 1875 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	27157	27383	1.000	+	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U586233 1876 2102 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	28234	28551	1.000	+	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U586233 2103 2420 +;Parent=SGN-U586233_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	30549	31321	0.984	+	0	ID=SGN-U578609_alignment_1;Target=SGN-U578609 1 773 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	30549	31321	0.984	+	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U578609 1 773 +;Parent=SGN-U578609_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match	31185	31852	0.999	-	0	ID=SGN-U579088_alignment_1;Target=SGN-U579088 40 707 +
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	match_part	31185	31852	0.999	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U579088 40 707 +;Parent=SGN-U579088_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	4807	7546	.	-	0	ID=GTH_SGN_U_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	4871	7546	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	7276	7546	1.000	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6664	6801	1.000	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6182	6466	1.000	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6005	6061	0.982	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	4871	5097	0.978	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	4807	6556	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_2;Parent=GTH_SGN_U_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6182	6556	0.995	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6005	6061	1.000	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	4807	5097	0.979	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	5709	6736	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_3;Parent=GTH_SGN_U_tom_gene_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6664	6736	0.973	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_1_AGS_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	6182	6466	1.000	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_1_AGS_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	5709	6061	1.000	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_1_AGS_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	7913	11759	.	-	0	ID=GTH_SGN_U_tom_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	7913	11759	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	11492	11759	0.996	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	11032	11168	0.993	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	9623	9797	0.960	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	9414	9475	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	7913	8097	0.989	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	13533	14078	.	-	0	ID=GTH_SGN_U_tom_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	13533	14078	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	13533	14078	0.980	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	14392	14934	.	-	0	ID=GTH_SGN_U_tom_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	14392	14934	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	14392	14934	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	19756	28551	.	+	0	ID=GTH_SGN_U_tom_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	19756	28551	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	19756	20664	0.999	+	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	21151	21360	1.000	+	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	23818	24318	1.000	+	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	24786	24860	1.000	+	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	25110	25188	1.000	+	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	26474	26538	1.000	+	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	27041	27076	1.000	+	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	27157	27383	1.000	+	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	28234	28551	1.000	+	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	30549	31321	.	+	0	ID=GTH_SGN_U_tom_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	30549	31321	.	+	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	30549	31321	0.984	+	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	gene	31185	31852	.	-	0	ID=GTH_SGN_U_tom_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	mRNA	31185	31852	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C03HBa0295I12.1	GenomeThreader_SGN_U_tomato	exon	31185	31852	0.999	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C03HBa0295I12.1	GenomeThreader_SGN_markers	match	19777	20361	0.997	+	0	ID=SSR11_alignment_1;Target=SSR11 1 585 +
C03HBa0295I12.1	GenomeThreader_SGN_markers	match_part	19777	20361	0.997	+	0	ID=GTH_SGN_markers_match_part_1;Target=SSR11 1 585 +;Parent=SSR11_alignment_1
C03HBa0295I12.1	GenomeThreader_SGN_markers	match	19777	20361	0.997	+	0	ID=SSR604_alignment_1;Target=SSR604 1 585 +
C03HBa0295I12.1	GenomeThreader_SGN_markers	match_part	19777	20361	0.997	+	0	ID=GTH_SGN_markers_match_part_2;Target=SSR604 1 585 +;Parent=SSR604_alignment_1
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	gene	751	2222	0.55	-	.	ID=g1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	transcript	751	2222	0.55	-	.	ID=g1.t1_4;Parent=g1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	1	750	0.55	-	.	Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	828	1050	1	-	.	Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	1119	2191	1	-	.	Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	751	827	0.88	-	0	ID=g1.t1.cds_11;Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	1051	1118	1	-	2	ID=g1.t1.cds_12;Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	2192	2222	1	-	0	ID=g1.t1.cds_13;Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	start_codon	2220	2222	.	-	0	Parent=g1.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	gene	2273	12258	0.32	-	.	ID=g2_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	transcript	2273	12258	0.32	-	.	ID=g2.t1_4;Parent=g2_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	stop_codon	2273	2275	.	-	0	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	2277	4939	0.87	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	5098	6004	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	6062	6181	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	6467	6663	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	6802	7275	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	8098	9413	0.83	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	9476	9622	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	9798	11031	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	11169	11491	1	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	11534	12233	0.43	-	.	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	2273	2276	0.99	-	1	ID=g2.t1.cds_28;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	4940	5097	0.87	-	0	ID=g2.t1.cds_29;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	6005	6061	1	-	0	ID=g2.t1.cds_30;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	6182	6466	1	-	0	ID=g2.t1.cds_31;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	6664	6801	1	-	0	ID=g2.t1.cds_32;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	7276	8097	0.83	-	0	ID=g2.t1.cds_33;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	9414	9475	1	-	2	ID=g2.t1.cds_34;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	9623	9797	1	-	0	ID=g2.t1.cds_35;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	11032	11168	1	-	2	ID=g2.t1.cds_36;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	11492	11533	1	-	2	ID=g2.t1.cds_37;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	12234	12258	0.42	-	0	ID=g2.t1.cds_38;Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	start_codon	12256	12258	.	-	0	Parent=g2.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	gene	19876	27330	0.96	+	.	ID=g3_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	transcript	19876	27330	0.96	+	.	ID=g3.t1_4;Parent=g3_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	start_codon	19876	19878	.	+	0	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	20665	21150	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	21361	23817	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	24319	24785	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	24861	25109	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	25189	26473	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	26539	27040	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	intron	27077	27156	1	+	.	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	19876	20664	0.96	+	0	ID=g3.t1.cds_20;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	21151	21360	1	+	0	ID=g3.t1.cds_21;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	23818	24318	1	+	0	ID=g3.t1.cds_22;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	24786	24860	1	+	0	ID=g3.t1.cds_23;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	25110	25188	1	+	0	ID=g3.t1.cds_24;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	26474	26538	1	+	2	ID=g3.t1.cds_25;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	27041	27076	1	+	0	ID=g3.t1.cds_26;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	27157	27330	1	+	0	ID=g3.t1.cds_27;Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	stop_codon	27328	27330	.	+	0	Parent=g3.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	gene	30666	31757	1	+	.	ID=g4_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	transcript	30666	31757	1	+	.	ID=g4.t1_4;Parent=g4_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	start_codon	30666	30668	.	+	0	Parent=g4.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	CDS	30666	31757	1	+	0	ID=g4.t1.cds_4;Parent=g4.t1_4
C03HBa0295I12.1	AUGUSTUS_tom_pot_cdna	stop_codon	31755	31757	.	+	0	Parent=g4.t1_4
C03HBa0295I12.1	BLAST_ath_pep	match	7279	8010	152	-	0	ID=AT1G17460.1_fwd_alignment_1;blast_gaps=5;Target=AT1G17460.1 182 401 +;blast_match_length=-731;blast_percent_identity=40.57;blast_mismatches=145;blast_evalue=2e-35
C03HBa0295I12.1	BLAST_ath_pep	match	30849	31223	144	+	0	ID=AT1G54060.1_fwd_alignment_1;blast_gaps=2;Target=AT1G54060.1 90 205 +;blast_match_length=374;blast_percent_identity=58.40;blast_mismatches=52;blast_evalue=5e-33
C03HBa0295I12.1	BLAST_ath_pep	match	5954	6520	105	-	0	ID=AT1G72650.1_fwd_alignment_1;blast_gaps=5;Target=AT1G72650.1 456 613 +;blast_match_length=-566;blast_percent_identity=35.68;blast_mismatches=118;blast_evalue=2e-21
C03HBa0295I12.1	BLAST_ath_pep	match	7276	8091	182	-	0	ID=AT1G72650.1_fwd_alignment_2;blast_gaps=4;Target=AT1G72650.1 185 436 +;blast_match_length=-815;blast_percent_identity=39.71;blast_mismatches=164;blast_evalue=2e-44
C03HBa0295I12.1	BLAST_ath_pep	match	5954	6520	105	-	0	ID=AT1G72650.2_fwd_alignment_1;blast_gaps=5;Target=AT1G72650.2 462 619 +;blast_match_length=-566;blast_percent_identity=35.68;blast_mismatches=118;blast_evalue=2e-21
C03HBa0295I12.1	BLAST_ath_pep	match	7276	8091	182	-	0	ID=AT1G72650.2_fwd_alignment_2;blast_gaps=4;Target=AT1G72650.2 191 442 +;blast_match_length=-815;blast_percent_identity=39.71;blast_mismatches=164;blast_evalue=2e-44
C03HBa0295I12.1	BLAST_ath_pep	match	30849	31145	125	+	0	ID=AT3G11100.1_fwd_alignment_1;blast_gaps=2;Target=AT3G11100.1 18 110 +;blast_match_length=296;blast_percent_identity=62.63;blast_mismatches=37;blast_evalue=1e-27
C03HBa0295I12.1	BLAST_ath_pep	match	30666	31229	203	+	0	ID=AT3G14180.1_fwd_alignment_1;blast_gaps=5;Target=AT3G14180.1 1 205 +;blast_match_length=563;blast_percent_identity=63.11;blast_mismatches=58;blast_evalue=5e-51
C03HBa0295I12.1	BLAST_ath_pep	match	30849	31658	147	+	0	ID=AT3G58630.1_fwd_alignment_1;blast_gaps=8;Target=AT3G58630.1 22 294 +;blast_match_length=809;blast_percent_identity=34.03;blast_mismatches=172;blast_evalue=4e-34
C03HBa0295I12.1	BLAST_ath_pep	match	30849	31145	131	+	0	ID=AT5G05550.1_fwd_alignment_1;blast_gaps=1;Target=AT5G05550.1 20 114 +;blast_match_length=296;blast_percent_identity=60.61;blast_mismatches=39;blast_evalue=2e-29
C03HBa0295I12.1	BLAST_ath_pep	match	30849	31145	131	+	0	ID=AT5G05550.2_fwd_alignment_1;blast_gaps=1;Target=AT5G05550.2 20 114 +;blast_match_length=296;blast_percent_identity=60.61;blast_mismatches=39;blast_evalue=2e-29
C03HBa0295I12.1	BLAST_ath_pep	match	16945	17277	193	-	0	ID=ATCG00730.1_fwd_alignment_1;blast_gaps=0;Target=ATCG00730.1 30 140 +;blast_match_length=-332;blast_percent_identity=88.29;blast_mismatches=13;blast_evalue=5e-48
C03HBa0295I12.1	BLAST_ath_pep	match	17581	18009	141	-	0	ID=ATCG00890.1_fwd_alignment_1;blast_gaps=0;Target=ATCG00890.1 177 319 +;blast_match_length=-428;blast_percent_identity=83.92;blast_mismatches=23;blast_evalue=2e-32
C03HBa0295I12.1	BLAST_ath_pep	match	17581	18009	141	-	0	ID=ATCG01250.1_fwd_alignment_1;blast_gaps=0;Target=ATCG01250.1 177 319 +;blast_match_length=-428;blast_percent_identity=83.92;blast_mismatches=23;blast_evalue=2e-32