##gff-version 3
##sequence-region C03HBa0191E01.1 1 21926
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match	18375	21786	0.996	-	0	ID=SGN-E316791_alignment_1;Target=SGN-E316791 1 633 +
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	21702	21786	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E316791 1 85 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	21230	21274	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E316791 86 130 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	21021	21098	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E316791 131 208 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	20780	20919	0.993	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E316791 209 348 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	19672	19754	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E316791 349 431 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18677	18793	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E316791 432 548 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18525	18588	0.984	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E316791 549 612 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18375	18395	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E316791 613 633 +;Parent=SGN-E316791_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match	18381	18793	0.994	-	0	ID=SGN-E427279_alignment_1;Target=SGN-E427279 13 208 +
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18677	18793	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E427279 13 129 +;Parent=SGN-E427279_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18525	18588	0.984	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E427279 130 193 +;Parent=SGN-E427279_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	18381	18395	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E427279 194 208 +;Parent=SGN-E427279_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match	20033	20802	0.919	-	0	ID=SGN-E434736_alignment_1;Target=SGN-E434736 1 762 +
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	20033	20802	0.919	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E434736 1 762 +;Parent=SGN-E434736_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match	20368	20802	0.926	-	0	ID=SGN-E409809_alignment_1;Target=SGN-E409809 1 429 +
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	match_part	20368	20802	0.926	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E409809 1 429 +;Parent=SGN-E409809_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	gene	18375	21786	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	mRNA	18375	21786	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	21702	21786	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	21230	21274	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	21021	21098	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	20780	20919	0.993	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	19672	19754	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	18677	18793	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	18525	18588	0.984	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	18375	18395	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	mRNA	20033	20802	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato_potato	exon	20033	20802	0.919	-	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C03HBa0191E01.1	RepeatMasker	nucleotide_motif	19140	19359	1273	-	0	ID=Copia00172_alignment_1;Target=Copia00172 284 517 -
C03HBa0191E01.1	BLAST_tomato_bacs	match	17658	21926	8112	+	0	ID=C03HBa0054O21.1_fwd_alignment_1;blast_gaps=0;Target=clone-C03HBa0054O21.1 17995 22263 +;blast_match_length=4268;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone	2	21911	1209	.	0	is_problematic=0;ID=C03HBa0191E01.1-LE_HBa0191E01_1
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	2	794	1451	+	0	ID=C03HBa0191E01.1-LE_HBa0191E01_T7_114233_1;blast_gaps=1;Target=LE_HBa0191E01_T7_114233 1 794 +;Parent=C03HBa0191E01.1-LE_HBa0191E01_1;is_problematic=0;blast_percent_identity=99.50;blast_mismatches=3;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_end	21417	21911	967	-	0	ID=C03HBa0191E01.1-LE_HBa0191E01_SP6_114232_1;blast_gaps=1;Target=LE_HBa0191E01_SP6_114232 1 496 +;Parent=C03HBa0191E01.1-LE_HBa0191E01_1;is_problematic=0;blast_percent_identity=99.80;blast_mismatches=0;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_end	874	1430	1033	-	0	ID=C03HBa0191E01.1-SL_MboI0128M07_SP6_211484_1;blast_gaps=1;Target=SL_MboI0128M07_SP6_211484 1 558 +;is_problematic=0;blast_percent_identity=99.46;blast_mismatches=2;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	3694	4015	597	+	0	ID=C03HBa0191E01.1-SL_FOS0088A24_pIBF_474382_1;blast_gaps=0;Target=SL_FOS0088A24_pIBF_474382 2 323 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=9e-168
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	4902	5510	1166	-	0	ID=C03HBa0191E01.1-SL_FOS0130H23_pIBF_493877_1;blast_gaps=0;Target=SL_FOS0130H23_pIBF_493877 2 610 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_end	5736	5977	448	-	0	ID=C03HBa0191E01.1-LE_HBa0119H18_SP6_41458_1;blast_gaps=0;Target=LE_HBa0119H18_SP6_41458 1 242 +;is_problematic=0;blast_percent_identity=98.35;blast_mismatches=4;blast_evalue=5e-123
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_end	6074	6457	761	-	0	ID=C03HBa0191E01.1-SL_FOS0029A07_pIBR_413443_1;blast_gaps=0;Target=SL_FOS0029A07_pIBR_413443 1 384 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	8514	8975	852	-	0	ID=C03HBa0191E01.1-SL_MboI0007E06_T7_146547_1;blast_gaps=1;Target=SL_MboI0007E06_T7_146547 1 461 +;is_problematic=0;blast_percent_identity=98.48;blast_mismatches=6;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_end	8650	9176	1045	-	0	ID=C03HBa0191E01.1-SL_FOS0240C18_pIBR_584315_1;blast_gaps=0;Target=SL_FOS0240C18_pIBR_584315 3 529 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	9290	9466	351	-	0	ID=C03HBa0191E01.1-SL_MboI0032N05_T7_219886_1;blast_gaps=0;Target=SL_MboI0032N05_T7_219886 261 437 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=9e-94
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	9506	9726	422	-	0	ID=C03HBa0191E01.1-SL_MboI0032N05_T7_219886_2;blast_gaps=0;Target=SL_MboI0032N05_T7_219886 1 221 +;is_problematic=0;blast_percent_identity=99.10;blast_mismatches=2;blast_evalue=3e-115
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	12170	12923	1487	-	0	ID=C03HBa0191E01.1-LE_HBa0065P07_T7_50269_1;blast_gaps=0;Target=LE_HBa0065P07_T7_50269 1 754 +;is_problematic=0;blast_percent_identity=99.87;blast_mismatches=1;blast_evalue=0.0
C03HBa0191E01.1	BLAST_tomato_bac_ends	clone_start	16623	16903	541	+	0	ID=C03HBa0191E01.1-SL_MboI0071B08_T7_269978_1;blast_gaps=0;Target=SL_MboI0071B08_T7_269978 1 281 +;is_problematic=0;blast_percent_identity=99.29;blast_mismatches=2;blast_evalue=5e-151
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match	18375	21786	0.996	-	0	ID=SGN-E316791_alignment_2;Target=SGN-E316791 1 633 +
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	21702	21786	1.000	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E316791 1 85 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	21230	21274	1.000	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E316791 86 130 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	21021	21098	1.000	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E316791 131 208 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	20780	20919	0.993	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E316791 209 348 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	19672	19754	1.000	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E316791 349 431 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	18677	18793	1.000	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E316791 432 548 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	18525	18588	0.984	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E316791 549 612 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	match_part	18375	18395	1.000	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E316791 613 633 +;Parent=SGN-E316791_alignment_2
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	gene	18375	21786	.	-	0	ID=GTH_SGN_E_tom_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	mRNA	18375	21786	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	21702	21786	1.000	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	21230	21274	1.000	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	21021	21098	1.000	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	20780	20919	0.993	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	19672	19754	1.000	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	18677	18793	1.000	-	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	18525	18588	0.984	-	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_E_tomato	exon	18375	18395	1.000	-	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	gene	2270	7055	0.15	-	.	ID=g1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	transcript	2270	7055	0.15	-	.	ID=g1.t1_1;Parent=g1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	stop_codon	2270	2272	.	-	0	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	2441	2536	0.77	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	2679	3234	0.9	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	3363	3469	0.81	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	3540	3625	0.49	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	3748	4062	0.99	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	4249	4635	0.89	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	4711	4836	0.98	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	4901	4971	0.99	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	5019	5175	0.8	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	5333	6930	0.82	-	.	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	2270	2440	0.49	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	2537	2678	0.77	-	1	ID=g1.t1.cds_2;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	3235	3362	0.96	-	0	ID=g1.t1.cds_3;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	3470	3539	0.81	-	1	ID=g1.t1.cds_4;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	3626	3747	0.49	-	0	ID=g1.t1.cds_5;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	4063	4248	1	-	0	ID=g1.t1.cds_6;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	4636	4710	0.92	-	0	ID=g1.t1.cds_7;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	4837	4900	0.99	-	1	ID=g1.t1.cds_8;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	4972	5018	0.99	-	0	ID=g1.t1.cds_9;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	5176	5332	0.64	-	1	ID=g1.t1.cds_10;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	6931	7055	0.64	-	0	ID=g1.t1.cds_11;Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	start_codon	7053	7055	.	-	0	Parent=g1.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	gene	8715	21898	0.14	-	.	ID=g2_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	transcript	8715	21898	0.14	-	.	ID=g2.t1_1;Parent=g2_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	stop_codon	8715	8717	.	-	0	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	9397	9617	0.99	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	9806	9882	0.88	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	9973	10072	0.96	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	10211	11588	0.53	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	11661	17991	0.33	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	18151	18248	1	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	18396	18524	1	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	18589	18676	1	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	18794	19671	1	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	19755	21049	0.62	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	21099	21229	0.79	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	intron	21275	21701	0.79	-	.	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	8715	9396	0.86	-	1	ID=g2.t1.cds_1;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	9618	9805	0.97	-	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	9883	9972	0.89	-	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	10073	10210	0.91	-	0	ID=g2.t1.cds_4;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	11589	11660	0.53	-	0	ID=g2.t1.cds_5;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	17992	18150	0.74	-	0	ID=g2.t1.cds_6;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	18249	18395	1	-	0	ID=g2.t1.cds_7;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	18525	18588	1	-	1	ID=g2.t1.cds_8;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	18677	18793	1	-	1	ID=g2.t1.cds_9;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	19672	19754	0.62	-	0	ID=g2.t1.cds_10;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	21050	21098	1	-	1	ID=g2.t1.cds_11;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	21230	21274	0.79	-	1	ID=g2.t1.cds_12;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	CDS	21702	21898	0.96	-	0	ID=g2.t1.cds_13;Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_tom_cdna	start_codon	21896	21898	.	-	0	Parent=g2.t1_1
C03HBa0191E01.1	AUGUSTUS_ab_initio	gene	279	21898	0.01	-	.	ID=g1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	transcript	279	21898	0.01	-	.	ID=g1.t1_2;Parent=g1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	1	278	0.2	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	470	1907	0.38	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	1951	2093	0.52	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	2193	2299	0.47	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	2441	2536	0.83	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	2679	3234	0.96	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	3363	3469	0.94	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	3540	3625	0.51	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	3748	4062	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	4249	4427	0.69	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	4548	4635	0.62	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	4711	4836	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	4901	4971	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	5019	5175	0.81	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	5333	6930	0.52	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	7059	7190	0.53	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	7317	8371	0.95	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	8537	8795	0.41	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	9397	9617	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	9806	9882	0.92	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	9973	10072	0.94	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	10211	11588	0.94	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	11661	14547	0.38	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	14597	15028	0.73	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	15100	15231	0.76	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	15274	15885	0.44	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	15961	16527	0.55	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	16613	16846	0.95	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	16904	17063	0.94	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	17163	17986	0.9	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	18151	18215	0.97	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	18396	18524	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	18589	18676	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	18794	19671	1	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	19755	21049	0.6	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	21099	21229	0.95	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	intron	21275	21701	0.9	-	.	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	279	469	0.2	-	2	ID=g1.t1.cds_12;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	1908	1950	0.47	-	0	ID=g1.t1.cds_13;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	2094	2192	0.65	-	0	ID=g1.t1.cds_14;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	2300	2440	0.47	-	0	ID=g1.t1.cds_15;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	2537	2678	0.82	-	1	ID=g1.t1.cds_16;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	3235	3362	1	-	0	ID=g1.t1.cds_17;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	3470	3539	0.94	-	1	ID=g1.t1.cds_18;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	3626	3747	0.51	-	0	ID=g1.t1.cds_19;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	4063	4248	1	-	0	ID=g1.t1.cds_20;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	4428	4547	0.69	-	0	ID=g1.t1.cds_21;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	4636	4710	0.91	-	0	ID=g1.t1.cds_22;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	4837	4900	1	-	1	ID=g1.t1.cds_23;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	4972	5018	1	-	0	ID=g1.t1.cds_24;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	5176	5332	0.47	-	1	ID=g1.t1.cds_25;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	6931	7058	0.47	-	0	ID=g1.t1.cds_26;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	7191	7316	0.99	-	0	ID=g1.t1.cds_27;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	8372	8536	0.9	-	0	ID=g1.t1.cds_28;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	8796	9396	0.75	-	1	ID=g1.t1.cds_29;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	9618	9805	0.97	-	0	ID=g1.t1.cds_30;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	9883	9972	0.93	-	0	ID=g1.t1.cds_31;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	10073	10210	0.94	-	0	ID=g1.t1.cds_32;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	11589	11660	0.95	-	0	ID=g1.t1.cds_33;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	14548	14596	0.43	-	1	ID=g1.t1.cds_34;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	15029	15099	0.97	-	0	ID=g1.t1.cds_35;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	15232	15273	0.79	-	0	ID=g1.t1.cds_36;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	15886	15960	0.55	-	0	ID=g1.t1.cds_37;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	16528	16612	0.97	-	1	ID=g1.t1.cds_38;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	16847	16903	0.98	-	1	ID=g1.t1.cds_39;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	17064	17162	0.93	-	1	ID=g1.t1.cds_40;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	17987	18150	0.93	-	0	ID=g1.t1.cds_41;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	18216	18395	0.97	-	0	ID=g1.t1.cds_42;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	18525	18588	1	-	1	ID=g1.t1.cds_43;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	18677	18793	1	-	1	ID=g1.t1.cds_44;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	19672	19754	0.6	-	0	ID=g1.t1.cds_45;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	21050	21098	0.99	-	1	ID=g1.t1.cds_46;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	21230	21274	0.96	-	1	ID=g1.t1.cds_47;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	CDS	21702	21898	0.96	-	0	ID=g1.t1.cds_48;Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_ab_initio	start_codon	21896	21898	.	-	0	Parent=g1.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	gene	2270	7055	0.1	-	.	ID=g1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	transcript	2270	7055	0.1	-	.	ID=g1.t1_3;Parent=g1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	stop_codon	2270	2272	.	-	0	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	2441	2536	0.76	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	2679	3234	0.92	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	3363	3469	0.88	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	3540	3625	0.5	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	3748	4062	1	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	4249	4635	0.81	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	4711	4836	0.98	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	4901	4971	0.97	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	5019	5175	0.85	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	5333	6930	0.75	-	.	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	2270	2440	0.51	-	0	ID=g1.t1.cds_49;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	2537	2678	0.76	-	1	ID=g1.t1.cds_50;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	3235	3362	1	-	0	ID=g1.t1.cds_51;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	3470	3539	0.88	-	1	ID=g1.t1.cds_52;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	3626	3747	0.5	-	0	ID=g1.t1.cds_53;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	4063	4248	1	-	0	ID=g1.t1.cds_54;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	4636	4710	0.88	-	0	ID=g1.t1.cds_55;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	4837	4900	0.98	-	1	ID=g1.t1.cds_56;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	4972	5018	0.98	-	0	ID=g1.t1.cds_57;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	5176	5332	0.69	-	1	ID=g1.t1.cds_58;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	6931	7055	0.67	-	0	ID=g1.t1.cds_59;Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	start_codon	7053	7055	.	-	0	Parent=g1.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_ugs	gene	8715	21898	0.12	-	.	ID=g2_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	transcript	8715	21898	0.12	-	.	ID=g2.t1_2;Parent=g2_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	stop_codon	8715	8717	.	-	0	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	9397	9617	1	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	9806	9882	0.94	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	9973	10072	0.97	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	10211	11588	0.5	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	11661	17991	0.3	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	18151	18215	0.61	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	18396	18524	0.7	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	18589	18676	1	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	18794	19671	1	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	19755	21049	1	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	21099	21229	0.81	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	intron	21275	21701	0.81	-	.	Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	8715	9396	0.84	-	1	ID=g2.t1.cds_14;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	9618	9805	0.98	-	0	ID=g2.t1.cds_15;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	9883	9972	0.96	-	0	ID=g2.t1.cds_16;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	10073	10210	0.9	-	0	ID=g2.t1.cds_17;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	11589	11660	0.51	-	0	ID=g2.t1.cds_18;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	17992	18150	0.68	-	0	ID=g2.t1.cds_19;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	18216	18395	0.61	-	0	ID=g2.t1.cds_20;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	18525	18588	1	-	1	ID=g2.t1.cds_21;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	18677	18793	1	-	1	ID=g2.t1.cds_22;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	19672	19754	1	-	0	ID=g2.t1.cds_23;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	21050	21098	1	-	1	ID=g2.t1.cds_24;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	21230	21274	0.81	-	1	ID=g2.t1.cds_25;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	CDS	21702	21898	0.98	-	0	ID=g2.t1.cds_26;Parent=g2.t1_2
C03HBa0191E01.1	AUGUSTUS_tom_ugs	start_codon	21896	21898	.	-	0	Parent=g2.t1_2
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match	17990	21788	0.992	-	0	ID=SGN-U569615_alignment_1;Target=SGN-U569615 1 922 +
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	21702	21788	1.000	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U569615 1 87 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	21230	21274	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U569615 88 132 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	21021	21098	1.000	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U569615 133 210 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	20780	20919	0.993	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U569615 211 350 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	19672	19754	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U569615 351 433 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	18677	18793	1.000	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U569615 434 550 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	18525	18588	0.984	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U569615 551 614 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	18249	18395	0.986	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U569615 615 761 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	match_part	17990	18150	0.981	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U569615 762 922 +;Parent=SGN-U569615_alignment_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	gene	17990	21788	.	-	0	ID=GTH_SGN_U_tom_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	mRNA	17990	21788	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	21702	21788	1.000	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	21230	21274	1.000	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	21021	21098	1.000	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	20780	20919	0.993	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	19672	19754	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	18677	18793	1.000	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	18525	18588	0.984	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	18249	18395	0.986	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	GenomeThreader_SGN_U_tomato	exon	17990	18150	0.981	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	gene	2270	7055	0.1	-	.	ID=g1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	transcript	2270	7055	0.1	-	.	ID=g1.t1_4;Parent=g1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	stop_codon	2270	2272	.	-	0	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	2441	2536	0.75	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	2679	3234	0.9	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	3363	3469	0.85	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	3540	3625	0.48	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	3748	4062	0.99	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	4249	4635	0.84	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	4711	4836	0.98	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	4901	4971	0.98	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	5019	5175	0.83	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	5333	6930	0.71	-	.	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	2270	2440	0.43	-	0	ID=g1.t1.cds_60;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	2537	2678	0.73	-	1	ID=g1.t1.cds_61;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	3235	3362	0.98	-	0	ID=g1.t1.cds_62;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	3470	3539	0.85	-	1	ID=g1.t1.cds_63;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	3626	3747	0.48	-	0	ID=g1.t1.cds_64;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	4063	4248	1	-	0	ID=g1.t1.cds_65;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	4636	4710	0.92	-	0	ID=g1.t1.cds_66;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	4837	4900	0.98	-	1	ID=g1.t1.cds_67;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	4972	5018	0.98	-	0	ID=g1.t1.cds_68;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	5176	5332	0.62	-	1	ID=g1.t1.cds_69;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	6931	7055	0.62	-	0	ID=g1.t1.cds_70;Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	start_codon	7053	7055	.	-	0	Parent=g1.t1_4
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	gene	8715	21898	0.12	-	.	ID=g2_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	transcript	8715	21898	0.12	-	.	ID=g2.t1_3;Parent=g2_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	stop_codon	8715	8717	.	-	0	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	9397	9617	0.99	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	9806	9882	0.89	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	9973	10072	0.94	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	10211	11588	0.48	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	11661	17991	0.25	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	18151	18248	1	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	18396	18524	1	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	18589	18676	1	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	18794	19671	1	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	19755	21049	0.59	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	21099	21229	0.81	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	intron	21275	21701	0.81	-	.	Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	8715	9396	0.83	-	1	ID=g2.t1.cds_27;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	9618	9805	0.97	-	0	ID=g2.t1.cds_28;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	9883	9972	0.91	-	0	ID=g2.t1.cds_29;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	10073	10210	0.89	-	0	ID=g2.t1.cds_30;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	11589	11660	0.48	-	0	ID=g2.t1.cds_31;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	17992	18150	0.75	-	0	ID=g2.t1.cds_32;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	18249	18395	1	-	0	ID=g2.t1.cds_33;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	18525	18588	1	-	1	ID=g2.t1.cds_34;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	18677	18793	1	-	1	ID=g2.t1.cds_35;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	19672	19754	0.59	-	0	ID=g2.t1.cds_36;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	21050	21098	1	-	1	ID=g2.t1.cds_37;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	21230	21274	0.81	-	1	ID=g2.t1.cds_38;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	CDS	21702	21898	0.94	-	0	ID=g2.t1.cds_39;Parent=g2.t1_3
C03HBa0191E01.1	AUGUSTUS_tom_pot_cdna	start_codon	21896	21898	.	-	0	Parent=g2.t1_3
C03HBa0191E01.1	BLAST_ath_pep	match	18240	18590	114	-	0	ID=AT4G32180.1_fwd_alignment_1;blast_gaps=1;Target=AT4G32180.1 631 704 +;blast_match_length=-350;blast_percent_identity=55.56;blast_mismatches=52;blast_evalue=8e-47
C03HBa0191E01.1	BLAST_ath_pep	match	17989	18150	96.3	-	0	ID=AT4G32180.1_fwd_alignment_2;blast_gaps=0;Target=AT4G32180.1 702 755 +;blast_match_length=-161;blast_percent_identity=85.19;blast_mismatches=8;blast_evalue=8e-47
C03HBa0191E01.1	BLAST_ath_pep	match	18240	18590	114	-	0	ID=AT4G32180.2_fwd_alignment_1;blast_gaps=1;Target=AT4G32180.2 631 704 +;blast_match_length=-350;blast_percent_identity=55.56;blast_mismatches=52;blast_evalue=8e-47
C03HBa0191E01.1	BLAST_ath_pep	match	17989	18150	96.3	-	0	ID=AT4G32180.2_fwd_alignment_2;blast_gaps=0;Target=AT4G32180.2 702 755 +;blast_match_length=-161;blast_percent_identity=85.19;blast_mismatches=8;blast_evalue=8e-47