<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-10-07 23:22:06"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564288" ref_strand="+" ref_description="SGN-U564288 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147834327|emb|CAN72115.1| (e_value=3e-34) hypothetical; (*ATH) AT2G15910.1 (e_value=3e-34) | Symbol: None | CSL zinc finger domain-containing protein, contains Pfam PF05207: CSL zinc finger domain | chr2:6939488-6942415 REVERSE | Aliases: F19G14.9, F19G14_9; (*SWP) sp|Q9VGQ9|DPH3_DROME (e_value=8e-17) DPH3 homolog OS=Drosophila melanogaster GN=CG14701; ">
      <seq>gagccaaaaaccctaatctccaagaaaaggaagaaataaatcaccaaggatgtcttacgacgacgtggagattgaggatatggagtggaacgatgagctccaatcttatacttatccttgtccgtgcggtgacttgtttcaaatcacgaaggaagaactgaagattggggaagagatcgctcgatgccctagttgttccctttatatcaccgttatttataatctcgaagatttcctcggagattccaagaaacccgtcgagccctcgaaacaacagccagttgctgtcgcttgaggttcacgctgagtgcttcttttttttctttcatgaatttggtatcatattgtaatacctagtgatttgaagtggcattaactgcctgaaattttgcaattttggaaaagaaaggaatttatggttttgtttaaagtgtgtcctctgaatactattggaattgcgataaattattgtatgatatattcctagcaaacaattatgttgaactttgacatattattatggagctgtttatctggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="5924" stop="4787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5624" g_stop="5087" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U564288" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5624" e_stop="5087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCAAAAACCCTAATCTCCAAGAAAAGGAAGAAATAAATCACCAAGGATGTCTTACGACGACGTGGAGATTGAGGATATGGAGTGGAACGATGAGCTCCAATCTTATACTTATCCTTGTCCGTGCGGTGACTTGTTTCAAATCACGAAGGAAGAACTGAAGATTGGGGAAGAGATCGCTCGATGCCCTAGTTGTTCCCTTTATATCACCGTTATTTATAATCTCGAAGATTTCCTCGGAGATTCCAAGAAACCCGTCGAGCCCTCGAAACAACAGCCAGTTGCTGTCGCTTGAGGTTCACGCTGAGTGCTTCTTTTTTTTCTTTCATGAATTTGGTATCATATTGTAATACCTAGTGATTTGAAGTGGCATTAACTGCCTGAAATTTTGCAATTTTGGAAAAGAAAGGAATTTATGGTTTTGTTTAAAGTGTGTCCTCTGAATACTATTGGAATTGCGATAAATTATTGTATGATATATTCCTAGCAAACAATTATGTTGAACTTTGACATATTATTATGGAGCTGTTTATCTGGT</genome_strand>
        <mrna_strand>GAGCCAAAAACCCTAATCTCCAAGAAAAGGAAGAAATAAATCACCAAGGATGTCTTACGACGACGTGGAGATTGAGGATATGGAGTGGAACGATGAGCTCCAATCTTATACTTATCCTTGTCCGTGCGGTGACTTGTTTCAAATCACGAAGGAAGAACTGAAGATTGGGGAAGAGATCGCTCGATGCCCTAGTTGTTCCCTTTATATCACCGTTATTTATAATCTCGAAGATTTCCTCGGAGATTCCAAGAAACCCGTCGAGCCCTCGAAACAACAGCCAGTTGCTGTCGCTTGAGGTTCACGCTGAGTGCTTCTTTTTTTTCTTTCATGAATTTGGTATCATATTGTAATACCTAGTGATTTGAAGTGGCATTAACTGCCTGAAATTTTGCAATTTTGGAAAAGAAAGGAATTTATGGTTTTGTTTAAAGTGTGTCCTCTGAATACTATTGGAATTGCGATAAATTATTGTATGATATATTCCTAGCAAACAATTATGTTGAACTTTGACATATTATTATGGAGCTGTTTATCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600588" ref_strand="+" ref_description="SGN-U600588 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157352396|emb|CAO43459.1| (e_value=2e-67) unnamed; (*ATH) AT2G15630.1 (e_value=1e-55) | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat | chr2:6821603-6823486 FORWARD | Aliases: F9O13.18; (*SWP) sp|Q9LN69|PPR50_ARATH (e_value=2e-11) Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290; ">
      <seq>gttctgcgagaatcagttacttcttctcagtggcattttatcaaacatgttacgggagaactaaaccccaccttgatttcagctactcttccagagcttcgttcatctcctgaccgagtactcactttcatcgaaaatctcggtcctgattgcttagacatatcctgttattgtcttgccatttccatactctctcgtctcccctcgcctaaacaagccactcaccttctcaagcaagtgatcagttctcgctttgcttcgcctaatgagattttttatgggcttgtgagtgctcgggagaagctggtggtgaagagttcaattgtgttggatttgcttgtaagggcgtattgtgaattgaagaagggggaggatgcattaaagtgcttttatttgatgaaacagaagggaattttgccaaaggtagagacttgtaatgatttgttgagtctttttcttaaattgaataggacccatttggcttggattgtgtatgccgagatgtttaggatgaaaatgagttctactgtatgtacgtttaatataatgatcaatgttttgtgtagagaaggaaagttgaagaaggcaaaagagttcattgaacacatgcagtgttcagggggttagccgatttaatatcttttaatactgtgattcatggttattgtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="5907" stop="7178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6207" g_stop="6878" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="671" r_length="671" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U600588" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6207" e_stop="6878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCGAGAATCAGTTACTTCTTCTCAGTGGCATTTTATCAAACATGTTACGGGAGAACTAAACCCCACCTTGATTTCAGCTACTCTTCCAGAGCTTCGTTCATCTCCTGACCGAGTACTCACTTTCATCGAAAATCTCGGTCCTGATTGCTTAGACATATCCTGTTATTGTCTTGCCATTTCCATACTCTCTCGTCTCCCCTCGCCTAAACAAGCCACTCACCTTCTCAAGCAAGTGATCAGTTCTCGCTTTGCTTCGCCTAATGAGATTTTTTATGGGCTTGTGAGTGCTCGGGAGAAGCTGGTGGTGAAGAGTTCAATTGTGTTGGATTTGCTTGTAAGGGCGTATTGTGAATTGAAGAAGGGGGAGGATGCATTAAAGTGCTTTTATTTGATGAAACAGAAGGGAATTTTGCCAAAGGTAGAGACTTGTAATGATTTGTTGAGTCTTTTTCTTAAATTGAATAGGACCCATTTGGCTTGGATTGTGTATGCCGAGATGTTTAGGATGAAAATGAGTTCTACTGTATGTACGTTTAATATAATGATCAATGTTTTGTGTAGAGAAGGAAAGTTGAAGAAGGCAAAAGAGTTCATTGAACACATGCAGTGTTCAGGGGTTAAGCCGAATTTAATATCTTTTAATACTGTGATTCATGGTTATTGTCTG</genome_strand>
        <mrna_strand>GTTCTGCGAGAATCAGTTACTTCTTCTCAGTGGCATTTTATCAAACATGTTACGGGAGAACTAAACCCCACCTTGATTTCAGCTACTCTTCCAGAGCTTCGTTCATCTCCTGACCGAGTACTCACTTTCATCGAAAATCTCGGTCCTGATTGCTTAGACATATCCTGTTATTGTCTTGCCATTTCCATACTCTCTCGTCTCCCCTCGCCTAAACAAGCCACTCACCTTCTCAAGCAAGTGATCAGTTCTCGCTTTGCTTCGCCTAATGAGATTTTTTATGGGCTTGTGAGTGCTCGGGAGAAGCTGGTGGTGAAGAGTTCAATTGTGTTGGATTTGCTTGTAAGGGCGTATTGTGAATTGAAGAAGGGGGAGGATGCATTAAAGTGCTTTTATTTGATGAAACAGAAGGGAATTTTGCCAAAGGTAGAGACTTGTAATGATTTGTTGAGTCTTTTTCTTAAATTGAATAGGACCCATTTGGCTTGGATTGTGTATGCCGAGATGTTTAGGATGAAAATGAGTTCTACTGTATGTACGTTTAATATAATGATCAATGTTTTGTGTAGAGAAGGAAAGTTGAAGAAGGCAAAAGAGTTCATTGAACACATGCAGTGTTCAGGGGGTTAGCCG-ATTTAATATCTTTTAATACTGTGATTCATGGTTATTGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598115" ref_strand="+" ref_description="SGN-U598115 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tttagcttcaagttgtttttgccccgagatccaggaaatacattaaacaacttcacttctgttttagccccaactttactccaatgtttttttctcttctgatacaacaactcagatagatagtttctgaccactaactccaatccccatggctagattttcatcaagaaacagatgttcatatcctttactggtttgtatctgggtggggttcttgattttgcttcatttctcatctttgggtagttatagaggtattcaaaaagggcagattcaagaaagatatgaagagttggaggagatccaaattcctcaatcaagtggaagccaatcctcagaagccaacatgctaattgatgaattccttgataagtcttctaaactcaggcacattttctttcctgacatgacgactagcatagaccctagaaagaatactaaagatgacaccttttactattaccctggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="8855" stop="9924"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9155" g_stop="9624" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U598115" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9155" e_stop="9624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGCTTCAAGTTGTTTTTGTCTCGAGATCCAGGAAATACATTAAACAACTTCACTTCTGTTTTAGCCCCAACTTTACTCCAATGTTTTTTTCTCTTCTGATACAACAACTCAGATAGATAGTTTCTGACCACTAACTCCAATCCCCATGGCTAGATTTTCATCAAGAAACAGATGTTCATATCCTTTACTGGTTTGTATCTTGGTGGGGTTCTTGATTTTGCTTCATTTCTCATCTTTGGGTAGTTATAGAGGTATTCAAAAAGGGCAGATTCAAGAAAGATATGAAGAGTTGGAGGAGATCCAAATTCCTCAATCAAGTGGAAGCCAATCCTCAGAAGCCAACATGCTAATTGATGAATTCCTTGATAAGTCTTCTAAACTCAGGCACATTTTCTTTCCTGACATGACGACTAGCATAGACCCTAGAAAGAATACTAAAGATGACACCTTTTACTATTACCCTGGGA</genome_strand>
        <mrna_strand>TTTAGCTTCAAGTTGTTTTTGCCCCGAGATCCAGGAAATACATTAAACAACTTCACTTCTGTTTTAGCCCCAACTTTACTCCAATGTTTTTTTCTCTTCTGATACAACAACTCAGATAGATAGTTTCTGACCACTAACTCCAATCCCCATGGCTAGATTTTCATCAAGAAACAGATGTTCATATCCTTTACTGGTTTGTATCTGGGTGGGGTTCTTGATTTTGCTTCATTTCTCATCTTTGGGTAGTTATAGAGGTATTCAAAAAGGGCAGATTCAAGAAAGATATGAAGAGTTGGAGGAGATCCAAATTCCTCAATCAAGTGGAAGCCAATCCTCAGAAGCCAACATGCTAATTGATGAATTCCTTGATAAGTCTTCTAAACTCAGGCACATTTTCTTTCCTGACATGACGACTAGCATAGACCCTAGAAAGAATACTAAAGATGACACCTTTTACTATTACCCTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572810" ref_strand="+" ref_description="SGN-U572810 Tomato 200607#2 [41 ESTs aligned] (*GB) gi|157340912|emb|CAO47717.1| (e_value=2e-22) unnamed; (*ATH) AT2G26500.1 (e_value=2e-18) | Symbol: None | cytochrome b6f complex subunit (petM), putative, nearly identical to cytochrome b6f complex subunit (GI:3090403) (Arabidopsis thaliana); alternative splice forms exist | chr2:11277225-11278031 FORWARD | Aliases: T9J22.17, T9J22_17; ">
      <seq>ttttagttctttcttttcaaagattttgtataaacttattacaacttcaatttatttatttattttgtacaggttggtggtcagaaaacaatggcaacaatgacaacattctctgcagcaacagtaagttcagcagccactataggcacaggcagaagctcttcccagaaagtaaccaaagtgaagtacattagtggtttgaattcatttgaagggctaaaggcaaacaaccatgttgcctcattaggcctccctatgtccactgaacaatcttttgcaaagattgttagctcattgaaaaccccatcatcacaagccaaaggtggagctttgtcctctacctgcaatgctgctcttgagattttcaggattgcttccattattcctggcttggttcttgttggagttgctgttggattcgtcctcctccgaattgaaactgctgtagaggaatctgaatgaaactttggtctgttaaaacattttcttttttcctgcatcaagattcactctctttctaattcctataatcctctgttctgaggtagaattgatttgttttggatatatatgttaaacttataaactatgagttcttccagaaactctaaccctcttattgtatacacttctttctaaatgttatgtgttgcctggcaagattttcacctgtagggctctgaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="11993" stop="10707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11693" g_stop="11007" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U572810" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11693" e_stop="11007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGTTCTTTCTTTTCAAAGATTTTGTATAAACTTATTACAACTTCAATTTATTTATTTATTTTGTATAGGTTGGTGGTCAGAAAACAATGGCAACAATGACAACATTCTCTGCAGCAACAGTAAGTTCAGCAGCCACTATAGGCACAGGCAGAAGCTCTTCCCAGAAAGTAACCAAAGTGAAGTACATTAGTGGTTTGAATTCATTTGAAGGGCTAAAGGCAAACAACCATGTTGCCTCATTAGGCCTCCCTATGTCCACTGAACAATCTTTTGCAAAGATTGTTAGCTCATTGAAAACCCCATCATCACAAGCCAAAGGTGGAGCTTTGTCCTCTACCTGCAATGCTGCTCTTGAGATTTTCAGGATTGCTTCCATTATTCCTGGCTTGGTTCTTGTTGGAGTTGCTGTTGGATTCGTCCTCCTCCGAATTGAAACTGCTGTAGAGGAATCTGAATGAAACTTTGGTCTGTTAAAACATTTTCTTTTTTCCTGCATCAAGATTCACTCTCTTTCTAATTCCTATAATCCTCTGTTCTGAGGTAGAATTGATTTGTTTTGGATATATATGTTAAACTTATAAACTATGAGTTCTTCCAGAAACTCTAACCCTCTTATTGTATACACTTCTTTCTAAATGTTATGTGTTGCCTGGCAAGATTTTCACCTGTAGGGCTCTGACCAT</genome_strand>
        <mrna_strand>TTTTAGTTCTTTCTTTTCAAAGATTTTGTATAAACTTATTACAACTTCAATTTATTTATTTATTTTGTACAGGTTGGTGGTCAGAAAACAATGGCAACAATGACAACATTCTCTGCAGCAACAGTAAGTTCAGCAGCCACTATAGGCACAGGCAGAAGCTCTTCCCAGAAAGTAACCAAAGTGAAGTACATTAGTGGTTTGAATTCATTTGAAGGGCTAAAGGCAAACAACCATGTTGCCTCATTAGGCCTCCCTATGTCCACTGAACAATCTTTTGCAAAGATTGTTAGCTCATTGAAAACCCCATCATCACAAGCCAAAGGTGGAGCTTTGTCCTCTACCTGCAATGCTGCTCTTGAGATTTTCAGGATTGCTTCCATTATTCCTGGCTTGGTTCTTGTTGGAGTTGCTGTTGGATTCGTCCTCCTCCGAATTGAAACTGCTGTAGAGGAATCTGAATGAAACTTTGGTCTGTTAAAACATTTTCTTTTTTCCTGCATCAAGATTCACTCTCTTTCTAATTCCTATAATCCTCTGTTCTGAGGTAGAATTGATTTGTTTTGGATATATATGTTAAACTTATAAACTATGAGTTCTTCCAGAAACTCTAACCCTCTTATTGTATACACTTCTTTCTAAATGTTATGTGTTGCCTGGCAAGATTTTCACCTGTAGGGCTCTGACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588239" ref_strand="+" ref_description="SGN-U588239 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|5306243|gb|AAD41976.1| (e_value=2e-11) hypothetical; (*ATH) AT2G15900.1 (e_value=1e-13) | Symbol: None | phox (PX) domain-containing protein, weak similarity to SP:Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain | chr2:6934472-6939784 FORWARD | Aliases: F19G14.10, F19G14_10; ">
      <seq>acatggaaaaagatgttgtagaaagccgatgaactacctatgtgggcgacctcttcttcttctgaatccagtcatgacgacggaatccggccacgacgacggtaaaatgatcgagtcttactcccgtgcgacggtaaaaaaagattgaatctaaggatttttaggttactaatttttcttgtttctttaactggtcattccttgttcttgagttgttgaattaatgttttgctgataatcgtactccctttctttttatgttaaagctcggtaagatgtccatgattcttgaattcttgattgaagtttccggttctttacttcttgaattgatgttccttaattcgttttcttcccattgttttacttgcttgttcacatggttgtggccagatcatttcaggttatgcacattgtagtttttagagaatcctagtcaattttctttggcatgtatcagaagaatcatctcattctaaagtgtctttctaggaggcacttagaatgtgaaactactatgtgatggaagggggcttgcttttctttcatcagcattgcattcagctttacaaatatctgctagatctcttgtcaattgccaatgtggctgagcaacatgaatgtgggatttcttagggcctcttcaagttaacgtggatgattctgtcgatgatattgtgcgtcaatttcgaggcgtttctgatagcttgatgcgtaaagttttcggctatccttcatattcttcttatgaacctactacctctacttcagacataaatttgttttggaatgtggagaaatacataaactggctttaacacaaagcaactctgagtcagttaatagcttctcttacaatgataacggtgaaaagatggaagccacggggatgaggaagtaggacctagttcagaagacaatgggtggcattcggacaatgagttgaattcaaaaggatttaccccttaggtggtttaacgtgacgtagagccaataagttctgcggtggacttgaagaatggttctgtgctccagcgtgaattcttcagttctggaggattccctggagacaagtttggtagtagctcccagttaacaagaggtccagttaacaaggtatctcttacttcttcccctgtttctacttcttttgaatggtatatcttcatcggaaatttattctgctgaatacatgaaggatgaccaatagacgtactacaagacatctgaactaagaaattgtttcttatcagagggctgctagtaaatatatatgagctcatctttcttctgcatattcggatattttacttgtatgaaggagtcgattaacatgctttatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="18731" stop="22022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19031" g_stop="19612" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19613" i_stop="19681" i_length="69">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19682" g_stop="19747" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="648" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19748" i_stop="21026" i_length="1279">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21027" g_stop="21722" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="1344" r_length="696" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U588239" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19031" e_stop="19612"/>
          <exon e_start="19682" e_stop="19747"/>
          <exon e_start="21027" e_stop="21722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGAAAAAGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTAGTATGTTTCTGCACTTCTTTTATATCTATTTGTGCCTTCTGGTTGCTTTAAATGTTCTTTCTCTATCAGGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAGGTATATATTTCTTGAAGTTCGTTACGTCTTATACCATCATTTCATATAGATCTAGGCTGTTTTAACCCTAACTAATACCTGATTTATGTCTATGAAGAACTACTCTTTTGGAAAATCTTCTTCAGTGATTTTTCCAGCCAACATGTTTGTTTTCTTTATCTATGTGATGAGTCTGGTATTTACATTACCTCTATATACTCGTATACATGGAATGTGGTAAAAGGGTAGTCCTGTTGATGACTGCAATAAATAAATCTCCATTTAATGGCCAGAATAACTTGTACCGAGTTTCTTTGCATAGGATGCAGCGTGGGTATCTGATTCCAACTCCAGATAATGCTTAATTCTTGAAGTGAGTTGGGAAGTCTGCTTTGCTAAATTATAAAGCTTAAGTTTGAACAAAGTATTGTACTATTAAATCACAATCTGAGGCGACACACTTTGTTACTTTTCTTCACATCATATAATCTGCAGTCATGAACTTTAAGTAGTGTGCTTATTTAATTGTGTTATAATAGAGTTAAATTCTTAATTCACATATTGTTCCGTGTTGGAGAAGTACCATATGTATTATATTTGAAACCTATAAATAAATAGGCGTGTTGTATTCACTGGATTGTCAAGTTATCAATATGTTTTTTCTTGTCTCATTCTCTCACATGATATCTGAGTCCACCTTTGTAGGGTTTCCTCGTACTGATAAGTCCACATTCAAATACATGAGTGAACCCCAAAAGTTGTTACACATGTGGAAGGTTGTTGAGTTATATAAAAGTGGCGTATAAGGTCTTGACAACTTTATTTTTTTCTTAAGGTTTGCTCAAACTTTCACATGGCATCAGAACTCCTAGATCTTCATAGACCTCAACAGGGCAGTCTTATGCTGGTTTTCAGTCTAAGTTCCTTTTCTTTTCATAATTGTCATTTTCTTGTCCTTTCTTGGCACCACCACTTCTTTCATAATTGTCATTTTCATAATTGCCATTTTCTTGTCCTTTCAAGGTTACTGACTAGGAAAATTATTGTCTGTTCTTGGCAGGGATTAAGTAGAATAATTGTTTAATTGTTCTCCTTTCTGGTGTATTTATGCATAAGAATCCTTAATGGCACATTCGATCTGTCAGCGTAGTGAATAACTACGTAAGATGATTATTTTTTTCCTTAATATACTTTTACGTCTTTCTCTGATTGCTTAAAAATGAACATAATGAGTGAGTAACATGGTATATGGTAGTTACTTAATTTGTTGTAATCTGATTGAACTCATCCTTTGTGACAGTTAACGTGGATGATTCTGTGGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTCTGGAGGATTCCCTGGAGACAAGTTTGGTAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTTTGAATGGTATATCTTCATCGGAAATTTATTCTGCTGAATACATGAAGGATGACCAATAGACGTACTACAAGACATCTGAACTAAGAAATTGTTTCTTATCAGAGGGCTGCTAGTAAATATATATGAGCTCATCTTTCTTCTGCATATTCGGATATTTTACTTGTATGAAGGAGTCGATTAACATGCTTTATTA</genome_strand>
        <mrna_strand>ACATGGAAAAAGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTA.....................................................................GATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGTGGATGATTCTGTCGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTCTGGAGGATTCCCTGGAGACAAGTTTGGTAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTTTGAATGGTATATCTTCATCGGAAATTTATTCTGCTGAATACATGAAGGATGACCAATAGACGTACTACAAGACATCTGAACTAAGAAATTGTTTCTTATCAGAGGGCTGCTAGTAAATATATATGAGCTCATCTTTCTTCTGCATATTCGGATATTTTACTTGTATGAAGGAGTCGATTAACATGCTTTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588238" ref_strand="+" ref_description="SGN-U588238 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>acatggaaaaagatgttgtagaaagccgatgaactacctatgtgggcgacctcttcttcttctgaatccagtcatgacgacggaatccggccacgacgacggtaaaatgatcgagtcttactcccgtgcgacggtaaaaaaagattgaatctaaggatttttaggttactaatttttcttgtttctttaactggtcattccttgttcttgagttgttgaattaatgttttgctgataatcgtactccctttctttttatgttaaagctcggtaagatgtccatgattcttgaattcttgattgaagtttccggttctttacttcttgaattgatgttccttaattcgttttcttcccattgttttacttgcttgttcacatggttgtggccagatcatttcaggttatgcacattgtagtttttagagaatcctagtcaattttctttggcatgtatcagaagaatcatctcattctaaagtgtctttctaggaggcacttagaatgtgaaactactatgtgatggaagggggcttgcttttctttcatcagcattgcattcagctttacaaatatctgctagatctcttgtcaattgccaatgtggctgagcaacatgaatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="18731" stop="20024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19031" g_stop="19612" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19613" i_stop="19681" i_length="69">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19682" g_stop="19724" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="625" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U588238" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19031" e_stop="19612"/>
          <exon e_start="19682" e_stop="19724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGAAAAAGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTAGTATGTTTCTGCACTTCTTTTATATCTATTTGTGCCTTCTGGTTGCTTTAAATGTTCTTTCTCTATCAGGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTG</genome_strand>
        <mrna_strand>ACATGGAAAAAGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTA.....................................................................GATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571358" ref_strand="+" ref_description="SGN-U571358 Tomato 200607#2 [3 ESTs aligned] (*ATH) AT2G15900.1 (e_value=9e-11) | Symbol: None | phox (PX) domain-containing protein, weak similarity to SP:Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain | chr2:6934472-6939784 FORWARD | Aliases: F19G14.10, F19G14_10; ">
      <seq>agatgttgtagaaagccgatgaactacctatgtgggcgacctcttcttcttctgaatccagtcatgacgacggaatccggccacgacgacggtaaaatgatcgagtcttactcccgtgcgacggttatgcacattgtagtttttagagaatcctagtcaattttctttggcatgtatcagaagaatcatctcattctaaagtgtctttctaggaggcacttagaatgtgaaactactatgtgatggaagggggcttgcttttctttcatcagcattgcattcagctttacaaatatctgctagtatgtttctgcacttcttttatatctatttgtgccttctggttgctttaaatgttctttctctatcaggatctcttgtcaattgccaatgtggctgagcaacatgaatgtgggatttcttagggcctcttcaagttaacgtggatgattctgtggatgatattgtgcgtcaatttcgaggcgtttctgatagcttgatgcgtaaagttttcggctatccttcatattcttcttatgaacctactacctctacttcagacataaatttgttttggaatgtggagaaatacataaactggctttaacacaaagcaactctgagtcagttaatagcttctcttacaatgataacggtgaaaagatggaagccacggggatgaggaagtaggacctagttcagaagacaatgggtggcattcggacaatgagttgaattcaaaaggatttaccccttaggtggtttaacgtgacgtagagccaataagttctgcggtggacttgaagaatggttctgtgctccagcgtgaattcttcagttttggaggattccctggagacaagtttggcagtagctcccagttaacaagaggtccagttaacaaggtatctcttacttcttcccctgtttctacttcttatgaatggtatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="18741" stop="21841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19041" g_stop="19163" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19164" i_stop="19433" i_length="270">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19434" g_stop="19747" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="437" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19748" i_stop="21026" i_length="1279">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21027" g_stop="21541" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="952" r_length="515" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U571358" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>952</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19041" e_stop="19163"/>
          <exon e_start="19434" e_stop="19747"/>
          <exon e_start="21027" e_stop="21541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTAGTATGTTTCTGCACTTCTTTTATATCTATTTGTGCCTTCTGGTTGCTTTAAATGTTCTTTCTCTATCAGGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAGGTATATATTTCTTGAAGTTCGTTACGTCTTATACCATCATTTCATATAGATCTAGGCTGTTTTAACCCTAACTAATACCTGATTTATGTCTATGAAGAACTACTCTTTTGGAAAATCTTCTTCAGTGATTTTTCCAGCCAACATGTTTGTTTTCTTTATCTATGTGATGAGTCTGGTATTTACATTACCTCTATATACTCGTATACATGGAATGTGGTAAAAGGGTAGTCCTGTTGATGACTGCAATAAATAAATCTCCATTTAATGGCCAGAATAACTTGTACCGAGTTTCTTTGCATAGGATGCAGCGTGGGTATCTGATTCCAACTCCAGATAATGCTTAATTCTTGAAGTGAGTTGGGAAGTCTGCTTTGCTAAATTATAAAGCTTAAGTTTGAACAAAGTATTGTACTATTAAATCACAATCTGAGGCGACACACTTTGTTACTTTTCTTCACATCATATAATCTGCAGTCATGAACTTTAAGTAGTGTGCTTATTTAATTGTGTTATAATAGAGTTAAATTCTTAATTCACATATTGTTCCGTGTTGGAGAAGTACCATATGTATTATATTTGAAACCTATAAATAAATAGGCGTGTTGTATTCACTGGATTGTCAAGTTATCAATATGTTTTTTCTTGTCTCATTCTCTCACATGATATCTGAGTCCACCTTTGTAGGGTTTCCTCGTACTGATAAGTCCACATTCAAATACATGAGTGAACCCCAAAAGTTGTTACACATGTGGAAGGTTGTTGAGTTATATAAAAGTGGCGTATAAGGTCTTGACAACTTTATTTTTTTCTTAAGGTTTGCTCAAACTTTCACATGGCATCAGAACTCCTAGATCTTCATAGACCTCAACAGGGCAGTCTTATGCTGGTTTTCAGTCTAAGTTCCTTTTCTTTTCATAATTGTCATTTTCTTGTCCTTTCTTGGCACCACCACTTCTTTCATAATTGTCATTTTCATAATTGCCATTTTCTTGTCCTTTCAAGGTTACTGACTAGGAAAATTATTGTCTGTTCTTGGCAGGGATTAAGTAGAATAATTGTTTAATTGTTCTCCTTTCTGGTGTATTTATGCATAAGAATCCTTAATGGCACATTCGATCTGTCAGCGTAGTGAATAACTACGTAAGATGATTATTTTTTTCCTTAATATACTTTTACGTCTTTCTCTGATTGCTTAAAAATGAACATAATGAGTGAGTAACATGGTATATGGTAGTTACTTAATTTGTTGTAATCTGATTGAACTCATCCTTTGTGACAGTTAACGTGGATGATTCTGTGGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTCTGGAGGATTCCCTGGAGACAAGTTTGGTAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTTTGAATGGTATAT</genome_strand>
        <mrna_strand>AGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACG..............................................................................................................................................................................................................................................................................GTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTAGTATGTTTCTGCACTTCTTTTATATCTATTTGTGCCTTCTGGTTGCTTTAAATGTTCTTTCTCTATCAGGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGTGGATGATTCTGTGGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTTTGGAGGATTCCCTGGAGACAAGTTTGGCAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTATGAATGGTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571357" ref_strand="+" ref_description="SGN-U571357 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ggtcattcctggttcttaaattaatgttttgctgataattgtacttcctttttatgttaatgtccatggttcttgaattcttgaattgaagttaccggttctttaattcttgaattgatgttccttctttcgtcttcttcccattggttttccttatttgttcacatggttgtagcaagatcaattttaggttatatgcatattatagttaaattttattgcttttaaattgacgttcatggtttcttgaattgctttcgatttacgttactactgtttcatatttatgcttctggctcttaaattgatttacctagctattcaattcttgaattcatcgttcatgaattaacttacctggttattgaattcttgaattcatgtcctgcatttaatgttaatgttcaattggtaacttctttttagtaaaagttcggggatatgttcctagttcttgaattctcgaattgaagttcccggttctttaattcttgattaaagtcccgggttctttaattcttgaattgatgttccttaattcgttttcttcccattgttttacttatttgtacacatggttgtggccagatcatttcaggttatgcacattgtaatttttagagaatcctagtcaattttctttggcatatatcagaagaatcatctcataaagtcactctaaagtgtctttcgagaggcacttanaatgtgaaactactatgtgatgaaaggaggcttgctttacataggttggnanaaatttcnnnaaaattaccaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="37962" stop="39325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38262" g_stop="39040" g_length="779"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="779" r_length="779" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U571357" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38262" e_stop="39040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCATTCCTGGTTCTTAAATTAATGTTTTGCTGATAATTGTACTTCCTTTTTATGTTAATGTCCATGGTTCTTGAATTCTTGAATTGAAGTTACCGGTTCTTTAATTCTTGAATTGATGTTCCTTCTTTCGTCTTCTTCCCATTGTTTTTCCTTATTTGTTCACATGGTTGTAGCAAGATCAATTTTAGGTTATATGCATATTATAGTTAAATTTTATTGTTTTTAAATTGACGTTCATGGTTTCTTGAATTGTTTTCGATTTAGGTTACTACTTTTTCATATTTATGTTTCTGGTTCTTAAATTGATTTACCTAGTTATTCAATTCTTGAATTCATCGTTCATGAATTAACTTACCTGGTTATTGAATTCTTGAATTCATGTCCTGCATTTAATGTTAATGTTCAATTGGTAACTTCTTTTTAGTAAAAGTTCGGGGATATGTTCCTAGTTCTTGAATTCTCGAATTGAAGTTCCCGGTTCTTTAATTCTTGATTAAAGTCCCGGGTTCTTTAATTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTATTTGTACACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAATTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATATATCAGAAGAATCATCTCATAAAGTCACTCTAAAGTGTCTTTCGAGAGGCACTTAGAATGTGAAACTACTATGTGATGAAAGGAGGCTTGCTTTACATAGGTTGGAAGAAATTTCAGGAAAATTACCAAG</genome_strand>
        <mrna_strand>GGTCATTCCTGGTTCTTAAATTAATGTTTTGCTGATAATTGTACTTCCTTTTTATGTTAATGTCCATGGTTCTTGAATTCTTGAATTGAAGTTACCGGTTCTTTAATTCTTGAATTGATGTTCCTTCTTTCGTCTTCTTCCCATTGGTTTTCCTTATTTGTTCACATGGTTGTAGCAAGATCAATTTTAGGTTATATGCATATTATAGTTAAATTTTATTGCTTTTAAATTGACGTTCATGGTTTCTTGAATTGCTTTCGATTTACGTTACTACTGTTTCATATTTATGCTTCTGGCTCTTAAATTGATTTACCTAGCTATTCAATTCTTGAATTCATCGTTCATGAATTAACTTACCTGGTTATTGAATTCTTGAATTCATGTCCTGCATTTAATGTTAATGTTCAATTGGTAACTTCTTTTTAGTAAAAGTTCGGGGATATGTTCCTAGTTCTTGAATTCTCGAATTGAAGTTCCCGGTTCTTTAATTCTTGATTAAAGTCCCGGGTTCTTTAATTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTATTTGTACACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAATTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATATATCAGAAGAATCATCTCATAAAGTCACTCTAAAGTGTCTTTCGAGAGGCACTTANAATGTGAAACTACTATGTGATGAAAGGAGGCTTGCTTTACATAGGTTGGNANAAATTTCNNNAAAATTACCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572360" ref_strand="+" ref_description="SGN-U572360 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147855061|emb|CAN82372.1| (e_value=2e-36) hypothetical; (*ATH) AT5G18090.1 (e_value=3e-13) | Symbol: None | transcriptional factor B3 family protein, contains Pfam profile PF02362: B3 DNA binding domain | chr5:5985390-5987163 FORWARD | Aliases: MRG7.5, MRG7_5; ">
      <seq>ggctaaacggaaaaggccccgaaaatagctcataaatacactccatcttcccatcttttcaaatcaattgaattgtgatatgatggaaaactcgttgttgaagatagacaaaagagcaattttctacaaggttttctgtccctcaatcactaatgaactgagaatcccagcccattttctcaggcatgtatcagaagaatcacctgataaagccaccctcaagtgtctttctggaggcacttggaatgtgaaactacagtgtgatgaagatggtttgcttatacaaaagggttggaagaaatttcaaaaaaataatcaattagaaaatggggaatatctcgtgtttaggtacgatggcgctctgcaattcacaataagaattttcagcaagaatggactggagaggcaagtgaaatcaacaaacatggtagaaaatcaacaagcttcaatagatggaggcagcaagcgtaaaaggccagaaaaattccctaaaaagacttgtgctaacggtgaaaatgaaacagaagatgtatgttgtgtttccttagaacatgaaactcgaagaaaaagagctgcacttgtgacagaagaggaccttctcactccaaatattcctcaatttgtgaaatgtttgaaaggctacaatgtgaaaaagtcttgtttcttgtacgttccaagatggttctctgaacaactttcgacatcaggcaataagagagcagctgtcctccgtaattcagaaggaaaagggtggaaagtgaattgtataacacaaaatggatatcatgctttctgtgggggatggaaacagtttgtgagtgataacaatcttaaggaaagacaggtctgtgtttttcagcttgtcaatgcaaatgaactaaaggtttctgttttcaacgatccttcggaatctctgttgaaacttgctgcacaaagatgataaatcttagttttgaactgctacgatttgatgtcattatgttggaatctgaactctgtagctgcttcacatgaacaaccgtgttttcattttcctttttctgtatttgagtaatcagagatgttccttcatttgttttttcctttctagtttttgttcctttatatgttcacatggttatagccacatcaaagggttgggtaggtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="58482" stop="56461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58183" g_stop="58024" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58023" i_stop="57937" i_length="87">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57936" g_stop="57573" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="524" r_length="364" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57572" i_stop="57481" i_length="92">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.725" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57480" g_stop="57338" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="667" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57337" i_stop="57241" i_length="97">
            <donor d_prob="0.304" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57240" g_stop="56761" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="1148" r_length="481" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U572360" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1147</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58183" e_stop="58024"/>
          <exon e_start="57936" e_stop="57573"/>
          <exon e_start="57480" e_stop="57338"/>
          <exon e_start="57240" e_stop="56761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAAACGGAAAAGGCCCCGAAAATAGCTCATAAATACACTCCATCTTCCCATCTTTTCAAATCAATTGAATTGTGATATGATGGAAAACTCGTTGTTGAAGATAGACAAAAGAGCAATTTTCTACAAGGTTTTCTGTCCCTCAATCACTAATGAACTGGTAATTCTCTGCTTCTGTTCATCATTTTACAAGCAATCTTACATTGTTCTGCTTTAATTTGAACATACTTGATGTTTTAATTTGTAGAGAATCCCAGCCCATTTTCTCAGGCATGTATCAGAAGAATCACCTGATAAAGCCACCCTCAAGTGTCTTTCTGGAGGCACTTGGAATGTGAAACTACAGTGTGATGAAGATGGTTTGCTTATACAAAAGGGTTGGAAGAAATTTCAAAAAAATAATCAATTAGAAAATGGGGAATATCTCGTGTTTAGGTACGATGGCGCTCTGCAATTCACAATAAGAATTTTCAGCAAGAATGGACTGGAGAGGCAAGTGAAATCAACAAACATGGTAGAAAATCAACAAGCTTCAATAGATGGAGGCAGCAAGCGTAAAAGGCCAGAAAAATTCCCTAAAAAGACTTGTGCTAACGGTGAAAATGAAACAGGTATAATGATACATTTCCAATTCTTCTTCTTGTTGTTGAAAGTTAGCATAAAATGGAGTAAAAGTGATCAAATTTAGATTTTTCCCTTGCAGAAGATGTATGTTGTGTTTCCTTAGAACATGAAACTCGAAGAAAAAGAGCTGCACTTGTGACAGAAGAGGACCTTCTCACTCCAAATATTCCTCAATTTGTGAAATGTTTGAAAGGCTACAATGTGAAAAAGTCTTGTTTCTTGGTAAGTGTTTTCTTGAACTAAAACAAGTTTATGTGACTGGTAAGATACTAAATGTGTAAAATGTATGTAAACCAAATAATTAATATTTCTAATGCAGTACGTTCCAAGATGGTTCTCTGAACAACTTTCGACATCAGGCAATAAGAGAGCAGCTGTCCTCCGTAATTCAGAAGGAAAAGGGTGGAAAGTGAATTGTATAACACAAAATGGATATCATGCTTTCTGTGGGGGATGGAAACAGTTTGTGAGTGATAACAATCTTAAGGAAGGACAGGTCTGTGTTTTTCAGCTTGTCAATGCAAATGAACTAAAGGTTTCTGTTTTCAACGATCCTTCGGAATCTCTGTTGAAACTTGCTGCACAAAGATGATAAATCTTAGTTTTGAACTGCTACGATTTGATGTCATTATGTTGGAATCTGAACTCTGTAGCTGCTTCACATGAACAACCGTGTTTTCATTTTCCTTTTTCTGTATTTGAGTAATCAGAGATGTTCCTTCATTTGTTTTTTCCTTTCTAGTTTTTGTTCCTTTATATGTTCACATGGTTATAGCCACATCAAA-GGTTGGTAAGGTGT</genome_strand>
        <mrna_strand>GGCTAAACGGAAAAGGCCCCGAAAATAGCTCATAAATACACTCCATCTTCCCATCTTTTCAAATCAATTGAATTGTGATATGATGGAAAACTCGTTGTTGAAGATAGACAAAAGAGCAATTTTCTACAAGGTTTTCTGTCCCTCAATCACTAATGAACTG.......................................................................................AGAATCCCAGCCCATTTTCTCAGGCATGTATCAGAAGAATCACCTGATAAAGCCACCCTCAAGTGTCTTTCTGGAGGCACTTGGAATGTGAAACTACAGTGTGATGAAGATGGTTTGCTTATACAAAAGGGTTGGAAGAAATTTCAAAAAAATAATCAATTAGAAAATGGGGAATATCTCGTGTTTAGGTACGATGGCGCTCTGCAATTCACAATAAGAATTTTCAGCAAGAATGGACTGGAGAGGCAAGTGAAATCAACAAACATGGTAGAAAATCAACAAGCTTCAATAGATGGAGGCAGCAAGCGTAAAAGGCCAGAAAAATTCCCTAAAAAGACTTGTGCTAACGGTGAAAATGAAACAG............................................................................................AAGATGTATGTTGTGTTTCCTTAGAACATGAAACTCGAAGAAAAAGAGCTGCACTTGTGACAGAAGAGGACCTTCTCACTCCAAATATTCCTCAATTTGTGAAATGTTTGAAAGGCTACAATGTGAAAAAGTCTTGTTTCTTG.................................................................................................TACGTTCCAAGATGGTTCTCTGAACAACTTTCGACATCAGGCAATAAGAGAGCAGCTGTCCTCCGTAATTCAGAAGGAAAAGGGTGGAAAGTGAATTGTATAACACAAAATGGATATCATGCTTTCTGTGGGGGATGGAAACAGTTTGTGAGTGATAACAATCTTAAGGAAAGACAGGTCTGTGTTTTTCAGCTTGTCAATGCAAATGAACTAAAGGTTTCTGTTTTCAACGATCCTTCGGAATCTCTGTTGAAACTTGCTGCACAAAGATGATAAATCTTAGTTTTGAACTGCTACGATTTGATGTCATTATGTTGGAATCTGAACTCTGTAGCTGCTTCACATGAACAACCGTGTTTTCATTTTCCTTTTTCTGTATTTGAGTAATCAGAGATGTTCCTTCATTTGTTTTTTCCTTTCTAGTTTTTGTTCCTTTATATGTTCACATGGTTATAGCCACATCAAAGGGTTGGGTAGGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571359" ref_strand="+" ref_description="SGN-U571359 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|30679545|ref|NP_179190.2| (e_value=8e-64) expressed protein [Arabidopsis thaliana]; (*ATH) AT2G15900.1 (e_value=6e-66) | Symbol: None | phox (PX) domain-containing protein, weak similarity to SP:Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain | chr2:6934472-6939784 FORWARD | Aliases: F19G14.10, F19G14_10; ">
      <seq>ggatcccccgcgctgcagggtaactctgagtcttttaatagtttttttgacaatgatgacggtgataaagatggaagccacgttcatgaggaagtaggacctagttcagaagacaatgggtggcattcagacaatgagttgaattcaaaaggatttccccctcgggtggttaaacatgacgaagagatggtaaactcagtggctgatttgaagaatggttctgggctacaacgtaaatcagtcagttctggaggattttcagagacaagtttggcagtagttccaagtcaacaagaggatctagttggagtgccaccagagtggacgccgcccaacttaagtgtacctatcttaaatttggtggacaagatttttcagctgaatagaagaggctggctaagaagacaggtattttggatatcaaaggaaattatgcagttaatgatggaggatgctattgatgattggctgttaaggcaaattcattggctacggagagatgatattattgctttgggaattaaatggattcaagatgttctctggcccaatggcattttcttcataaaattaagaaatattgttgaaagcagcaatgaaccaaatcaaggatctgttcatagcacgaaacaatctggaggaagtaaggtctctaaggcaggatcttttgaggagcagcttgaggctactcgtagggcaagtgatgtgaaaaagatgctctatgatggtgctcccgccactttggtcagcttaattgggcacaagcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="64685" stop="59165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64380" g_stop="64080" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="321" r_length="301" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64079" i_stop="62429" i_length="1651">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62428" g_stop="62349" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="401" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62348" i_stop="61181" i_length="1168">
            <donor d_prob="0.649" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61180" g_stop="61045" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="537" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61044" i_stop="60174" i_length="871">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.347" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60173" g_stop="59987" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="724" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59986" i_stop="59510" i_length="477">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59509" g_stop="59465" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="769" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U571359" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64380" e_stop="64080"/>
          <exon e_start="62428" e_stop="62349"/>
          <exon e_start="61180" e_stop="61045"/>
          <exon e_start="60173" e_stop="59987"/>
          <exon e_start="59509" e_stop="59465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACTCTGAGTCAGTTAATAGTTTCTCTGACAATGATGACGGTGATAAAGATGGAAGCCACGGGCATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCAGACAATGAGTTGAATTCAAAAGGATTTCCCCCTCGGGTGGTTAAACATGACGAAGAGATGGTAAACTCAGTGGCTGATTTGAAGAATGGTTCTGGGCTACAACGTAAATCAGTCAGTTCTGGAGGATTTTCAGAGACAAGTTTGGCAGTAGTTCCAAGTCAACAAGAGGATCTAGTTGGAGTGCCACCAGAGGTATCCCTTTCTTCTTCCTTTTCTACTTCTAGTGAACGGGATATCCAGTGGGAGAACATATAGAGGTTCTGATCCTCTTTGGAAATTTATTCTGCTGGAAACATGAATGAAGACCAATAGAGGCACTAACAGACATCTGAACTTAGGAATCATGTCTTATCAGTGGGATGCAAGTGATGTGCATGACCTCATCTTTTTTCTGCATATTTGGATTGTGCTATTTGTATCGAGGAGTGATTATCATACTTTATTAAGGTTCATATTAGGTGAGATAAAAACAGTCTGGTCTAATCCCATGTCTGGAATGCTCTCAATTGGATTACTTATACAAAAGGGCCATACCAGAGGACAACTTTCCCGTCAGTTATGGGGCAATTGAAGGGGGTTAAAGTTTCTTTTTCAGGGAAGGGTTGGTACACTTATCATATACTAGCATGTTTTTGCCCAAACATGTATGAAAACCTTATTACTTTATCCAATAAAAAATTGGGAAAGGCATATAACTGTGAAGCAACTGAAAATGATTATGAGCATTTAATTTGGTAGGAACTAGAGAGTAATAATTGCTTGATGCCTGTTTAATTGCTTGATGCCTGTTTAGCTCACTGGGGTGCTTGGATGCAGGCTATTATTTGAGATTCAGCATGTGATATCTTTACAAGTTGGGTTCTTGTTAACTTTCTGATCAAATGATATCAACTGTATGTCATCTGATATATTTCAGTTGGGATGGCAATGGGGCGGGTTGAGTCTTCTAACCTGCTAAAATTTCAACCTGCCCCACCCCACTAAACATTTTTTTCTACTTTCAACCTACTTGCCTTACCCTAGCCTATTTTAGTTTTTCTTTCATTTTTTTCTTCCTTCCGTTACTGTGTTAAAATAGGGAAGTTTATAATTTTATTTTTTAAAATGGGCTCTTTATATTGCTTTAGCAAAAGTCCAATGCTACTGTAAGTAAAATAACAGATCCAAAAATTTCTTGAATGACATAGTAAATAGTTCTCCATCACGTTCATTGATTTTATGCTAATTTATTTTTGCTAAGCATTCAAACTGGACGACTCTTTTTACCTAATTATATATGACATGCTTCACTAAAAAATCTAAGAAAACTATAGAAAGAAATAATTACAATGTTATCCACTATCTCTGTTATCAACTTGAATTATCAAATAATTCTATTTTAAAGATAAAGAAAGAAAACTATCTTTAGAATAAACATATTGCTCGTAATAAATCGGTATTTTTATCTGTAGCAACTCAATTATTCTTCAATAAATGGTAAAAGAAAATCAAAAGTGATTTTGAAGTAGCAAGTGAAAAAGAAACAGTTATAGATTAGAGATAGCAGTGAAGTGGATTTTTTTTTTTAGAGAAACGCTACAATGAATATGCTCGGAAGCAGAAATTTCGCCTGGAAGTCTGCAACCTGCCCCACTCCACCCCACCAAGTTTTTTAAAACTGGTTCATCCCACCCCGCCACACATCGGTTTAAACCCTCCCATTTCAGCCTCATTGCCACCCTGATTATTTCTCCCCCCAGTCGGCTACTGGTTCTTGATTTTGTGCTGGGCTGCTTTTTTTCCTCCTTAATATCACGTGCTTCTGTTTTGCTTACTCATTCTCATTTGGGTTTTTTCCTTTCAGTGGACGCCGCCCAACTTAAGTGTACCTATCTTAAATTTGGTGGACAAGATTTTTCAGCTGAATAGAAGAGGCTGGCTAAGGTGACAACAACATGTTTTGTACTTCTCTACTTCCCCTCCCCTCCCCTCCTGGTATCAAATTGAGAGTTGTTTTCCTACATTTAACTTCTCTTTCATATTTTCATTATTGGATCAGTTTTATCATCCATGTTTAACATCTTCATGCTTAATTTGGTTCCTAAAAATGAGTTAGAAGGGTCGATATAATATATGATTTGAAATTATGCCAAACCTACAAATTGTCATCCTGTAAAGCTGAACTACTAAAGTATGCACATGCTTCGCATGGAAATACATGAAGGAGAGAAGGAGATGATCCAGGATTTCACAAATTAGACATGGTTTTCAACAAAATTGTAACAATATGTAAATGTCCTCGCCACCTCATTAAAGATTGGTCCTTGTTGGGGCTTTATTTTGGTACTTTCACCGTAAATCCACAATTCCCAATTTTTTCTTCCCTCCCCTACATCACCCAATCTTTGTTCACTAGTGAGAAAAGGGAAAGAGCAGCCATGGTTCTTTAAAATTTCAAGTTTTTTTCCTTTTGCATCTTGTCTTCTTTCAACATTTACAGTGCCATCAATGGAGGTAAGAATTAATATGCTTCAATTTTGTTGATCAGATTATGGGTAAATATACTATTTGCCTTTAAAAAAGTGTTTATGCCCTGCGACCAGAGTAAGAATTTCCATTTATAGATTTGCATTTTTGCCTTTCTGTTTGTTCTTGCCTTCTGATTGATGGACTCAAAGTTTTAGTTTCCAGTGACCTGAATTCAATGAATGTATAAAAGAAGTGTTAAATTGAATAAAATCTTTATCTTGGTGGATCCTATTGCTCATTGTTCATGGTTTTACTCTGAACTCAGAAATTACCAAATTATTGACAAACTCCTTTCTTGTGGTTGTTTGAGGAATACCAAAGAATGAAGAGAAAGGAATGAAACTATCGATCTGGAAAATAATAAAAGTATGGACATTTAGGTGAATTGGGGGATTTATGTGAGGCAAAAAAAGCCCCTAAAAGACTAATATTAAGATCTCTACGGAAATTAGAAAATGGGAGGTGTAACACACCTATGCAGTAGGTTAGCGAAACCCTGCACAGATGGTATATTGTATGTATATTATTCCCATGGCATGGCATCATTAGCGAGCATCTAACAAAGCCATTTTTGTTAGCGCAGAAGACAGGTATTTTGGATATCAAAGGAAATTATGCAGTTAATGATGGAGGATGCTATTGATGATTGGCTGTTAAGGCAAATTCATTGGCTACGGAGAGATGATATTATTGCTTTGGGAATTAAATGGATTCAAGATGTAAGCATTTAGTTTTCTTATTGTAACTTTTCCATCTTACTTGCTTACCTTTGAAGCAATTTTTTCTTGGCTTCTGCTTCTGGACTTACAGTATTTACAGATTGCATTAACTAGATGACAAATGGGAAAAAAAACTCTTGATTGGTGGAGAGAAATAGTTTGGAATTACAAAAAAGGACAATGGTGTAGAGTCCCTTCTTAGCAAACTTTAGTGCAGGTTCCTTTTTTAGGAGTTGACATGTTATGCCTCTAATATTTTTTACAACGCTAGATTCCTCCTTGAGAGTTCTTCATAAAATTAATGCATGTGGCAATTCATCAATATTCCATAATTCAATCTTTGATCATTGATGTAATAAATTTAATTATTTCAATATGATTCATTTAGCATGACACTTCAGCTAATTCCTTATTAGATTTCAAAGTCTGCCATCTACAATACTGCACTTATGTAGATAGTATTTCTTTACATTATATTTATTTTGAACTTGATGTGGCATATGTGAAATAGATAGGAAGACATTAGCATTTGGAAATTAGTGTCGGGGGAAAGAATGTTAATTTGTGCTGCAACATAAAATGTTAATTTGTATGCACTTTTATATACGTCGTTGGTTTATAGAAGGTAGTTTCTTTTTTCTTTGTTTGAGAATTAAGTTTAATATGATTTAGTCAACTAATATTAGGGAGCATACCATACTCATAATGTATGGAATTTGACTAATATCATCTTGATTTCTTTGGTTGTGGGCTGTCTCCCGACTTCCTTGTGTGTCAACATTGTGCTACTTTAAGATTATAAAATGAGGAAATTATGCAGAAGGATTATTTGGAAGTGACTTTTTGGTTCTGTTGCTGATTGCATTCCTAGGTTCTCTGGCCCAATGGCATTTTCTTCATAAAATTAAGAAATATTGTTGAAAGCAGCAATGAACCAAATCAAGGATCTGTTCATAGCACGAAACAATCTGGAGGAAGTAAGGTCTCTAAGGCAGGATCTTTTGAGGAGCAGCTTGAGGCTACTCGTAGGGCAAGTGATGTGAAAAAGATGCTCTATGGTAAGTGTGGCTCTCGATTTTGCCTATTTTATGAAATGGAAGTTCCTTAAAATAAGATGTTTTTCTTGATTTTTCTATTGTTCATTTATGGATTTGGACTGTGCAAAAGTCAGAAAAATTCATGTCTCATTGTTGCTTCATTTTAAACTGTTTTCAAACTGTACTACTCTTGCTTCAGCTAGCCAGTTTCCCGGGCCTGTAACAGTTGTATAGAGGGTATTATTTTTTGTGGAGTAGATCGCTTACAGTATTGATTCACACACAATTTCCATGCTTGCACTGGGGGTGGTTCATGTTCGTTTAGGTTGGGTTATCTGTTCAATTTCACCAAACCAATTTGACCCTGTGCTTTATGTTGCCCTGCCACTCTACATTTAGTTCCTCTTTAAATTCTTAGATACAGGTAGGGTTTATAGCAACCCTGCCTTGAGAGGGCCATGGATGATATTATTAACTGGTTCCTCTTTAAATTCTTAGATGGTGCTCCCGCCACTTTGGTCAGCTTAATTGGGCACAAGCAGT</genome_strand>
        <mrna_strand>TAACTCTGAGTCTTTTAATAGTTTTTTTGACAATGATGACGGTGATAAAGATGGAAGCCACGTTCATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCAGACAATGAGTTGAATTCAAAAGGATTTCCCCCTCGGGTGGTTAAACATGACGAAGAGATGGTAAACTCAGTGGCTGATTTGAAGAATGGTTCTGGGCTACAACGTAAATCAGTCAGTTCTGGAGGATTTTCAGAGACAAGTTTGGCAGTAGTTCCAAGTCAACAAGAGGATCTAGTTGGAGTGCCACCAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCCGCCCAACTTAAGTGTACCTATCTTAAATTTGGTGGACAAGATTTTTCAGCTGAATAGAAGAGGCTGGCTAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGGTATTTTGGATATCAAAGGAAATTATGCAGTTAATGATGGAGGATGCTATTGATGATTGGCTGTTAAGGCAAATTCATTGGCTACGGAGAGATGATATTATTGCTTTGGGAATTAAATGGATTCAAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCTGGCCCAATGGCATTTTCTTCATAAAATTAAGAAATATTGTTGAAAGCAGCAATGAACCAAATCAAGGATCTGTTCATAGCACGAAACAATCTGGAGGAAGTAAGGTCTCTAAGGCAGGATCTTTTGAGGAGCAGCTTGAGGCTACTCGTAGGGCAAGTGATGTGAAAAAGATGCTCTATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGCTCCCGCCACTTTGGTCAGCTTAATTGGGCACAAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590343" ref_strand="+" ref_description="SGN-U590343 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118483253|gb|ABK93529.1| (e_value=4e-54) unknown; (*ATH) AT2G15890.1 (e_value=2e-48) | Symbol: None | expressed protein | chr2:6927451-6929084 REVERSE | Aliases: F19G14.11, F19G14_11; ">
      <seq>caattccttctgacttcttcttctctattataaaatatccttaaattttcataatttgttatctgtttctttttttacagaaacgatgatgttacaatcaatggctctcaattccttatcttctacttctctcgttggagttaataatgagcttcattcttcaagatttcaagtaaattcgtcgacaattcgttgttgttcaagaagtcatgcttacataccaaagctcgagccttttagcagaaccaagtttgatagagtttttaaagatccccctttgatcgaaaaatctgaaaatgaacttgccgattattgttctgttctagaaggtgatgattcttatagctgctggcaagcctattttgaactcaaagatcttgaaaaagaagcacctaaggaggaggtagagaggctaatacttcaagcagggggagtgaaaactctcattggctgcttacatggagtttcagacatgcacaaagccaaaaaggaaagcaaagaatcagccaaacctgtcaatcttgatgcacaacgggcaggangactgtgtcctataccagatggattgccaaagtcgagagaagagctcgaggaaganganaaagctagaatgccanantcnccctatactaaactgctcaganccaanggaacacacccngnttggnactgattacacttgactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="82092" stop="84493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82392" g_stop="82699" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82700" i_stop="83200" i_length="501">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83201" g_stop="83274" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="382" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83275" i_stop="83888" i_length="614">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83889" g_stop="84193" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="687" r_length="305" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U590343" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82392" e_stop="82699"/>
          <exon e_start="83201" e_stop="83274"/>
          <exon e_start="83889" e_stop="84193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCTTCTGACTTCTTCTTCTCTATTATAAAATATCCTTAAATTTTCATAATTTGTTATCTGTTTCTTTTTTTACAGAAACGATGATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCGGTATTTCCCAGATCTTCTTTATTTCTTCATCGTTACGTTTCCTTTGTGTCTATTTTCTTGGATTTATCATCAGACACGAATTCAAGATTTGAAGTTCATGGGTTCTTGATTATTCATGAATCTTTTAACGAGAAAAAAAAATGTCCTTGTGTTAGTAAAAACAGGAACTGTAATTGGGGTTTAATACAATAATTACGTAGCTAGTGTAAATTTCACAAGTGCGGGCGGTTCAGGGAGGGTTGGAGTATATGCTGAAGATAGTGAGGCTGTTTCCCCTATGTTTAAAAAATTGTTAAAGATGATTAATTAATTAAATTTCTGATTTATTCTAGTTTCTGTAGTTGTTAAACGATTTTAATTTATGTACATATTGGTATTCCCACCAAAAATTGGGATGGAGTAATTATCTACTAATTGAGCTTGCTTTTTTTGTTGTCGAAAGTATTAAGCTTTATCTGCTTTGTTGAATTACTAATGGATTCTGTGTATGGTTATGTGTAGATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAGTAAGTTCTTTATCAGCACGTTCTTCAAATAAAAATTATGTAGCATTCTTATTTGGCCGTGACATGCTACTGTATTATTATGTGTTGTTAGATAATAGGGTTTTCCAGTTTCAGACCTCACTTGCGAGATTACACTGAATATGTTGTTGTAGATGAATTAATTAACCTTTGGACGTTATTAGTACAGAAAACTTAAAACTCGAGGTTCAATATTTCCTTGGAACTATGAGGTAGAAGTTGATGAAAAAGAGCTAACAAAAATGTGTTTTCATTGTGTGTGTATGACAACCACATATAGTAAGCTAACAATTACATCTGAATTGTATACTTAAGTTAGAAATGTCCATATAAACAATAGCACTAGGTGATTTCTTCTTGTCTACCCAAGTCTTGGTTAACATAGTTACTTGACAGCTGCGCCTGAGGAATTTCAAATTGACCTGGACATCACAGTTATTAAAGAAAAAGTTCATCAAGCCAATTATTTGTTGTATTTTTTGTAAATCCAGTTTAAGTGATCTATTGTCCAGATATTGTAATGATCTTAAGCTATATTATGCGTAGCACCTTCCTACTGTGTTATTGAAAGGGATTTTGATTTTCTTTCTTTCCAGAAAGAAGCACCTAAGGAGGAGGTAGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAGAATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGAGGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAAGAGGAGAAAGCTAGAATGCCAGATTCACCCTATACTAAACTGCTCAGAGCCAAAGGAACACACCCTGTTTGGTACTGATTACACTTGACTAC</genome_strand>
        <mrna_strand>CAATTCCTTCTGACTTCTTCTTCTCTATTATAAAATATCCTTAAATTTTCATAATTTGTTATCTGTTTCTTTTTTTACAGAAACGATGATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGCACCTAAGGAGGAGGTAGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAGAATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGANGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAAGANGANAAAGCTAGAATGCCANANTCNCCCTATACTAAACTGCTCAGANCCAANGGAACACACCCNGNTTGGNACTGATTACACTTGACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580940" ref_strand="+" ref_description="SGN-U580940 Tomato 200607#2 [33 ESTs aligned] (*GB) gi|118483253|gb|ABK93529.1| (e_value=2e-53) unknown; (*ATH) AT2G15890.1 (e_value=2e-47) | Symbol: None | expressed protein | chr2:6927451-6929084 REVERSE | Aliases: F19G14.11, F19G14_11; ">
      <seq>atagggcgattggcggccaatcggccgaattgatctgtttctttttttacagaaacgatgatgttacaatcaatggctctcaattccttatcttctacttctctcgttggagttaataatgagcttcattcttcaagatttcaagtaaattcgtcgacaattcgttgttgttcaagaagtcatgcttacataccaaagctcgagccttttagcagaaccaagtttgatagagtttttaaagatccccctttgatcgaaaaatctgaaaatgaacttgccgattattgttctgttctagaaggtgatgattcttatagctgctggcaagcctattttgaactcaaagatcttgaaaaagaagcacctaaggaggaggtagagaggctaatacttcaagcagggggagtgaaaactctcattggctgcttacatggagtttcagacatgcacaaagccaaaaaggaaagcaaagaatcagccaaacctgtcaatcttgatgcacaacgggcaggaggactgtgtcctataccagatggattgccaaagtcgagagaagagctcgaggaagaggagaaagctagaatgccagattcaccctatactaaactgctcagagccaaaggaacacaccctgtttggtactgattacacttgactactggtatggagcttcataaaaagcacgctcttttggagcttcagataatcaggtcaaacaatggaattgaatagtattttcttggccaatgtggtaaaaattatctggtgatgtaatattaagcctgtggggatgttatcacgtatttttgttagtgttagcataaaatagtgtgctttgtcggtaggttataggagttgccatttgttctgaatgtaaatatggtttgtttttgaaaattataatagcagtgaagtttctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="82150" stop="84755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82452" g_stop="82699" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="280" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82700" i_stop="83200" i_length="501">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83201" g_stop="83274" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="354" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83275" i_stop="83888" i_length="614">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83889" g_stop="84455" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="921" r_length="567" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U580940" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>889</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82452" e_stop="82699"/>
          <exon e_start="83201" e_stop="83274"/>
          <exon e_start="83889" e_stop="84455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTTTCTTTTTTTACAGAAACGATGATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCGGTATTTCCCAGATCTTCTTTATTTCTTCATCGTTACGTTTCCTTTGTGTCTATTTTCTTGGATTTATCATCAGACACGAATTCAAGATTTGAAGTTCATGGGTTCTTGATTATTCATGAATCTTTTAACGAGAAAAAAAAATGTCCTTGTGTTAGTAAAAACAGGAACTGTAATTGGGGTTTAATACAATAATTACGTAGCTAGTGTAAATTTCACAAGTGCGGGCGGTTCAGGGAGGGTTGGAGTATATGCTGAAGATAGTGAGGCTGTTTCCCCTATGTTTAAAAAATTGTTAAAGATGATTAATTAATTAAATTTCTGATTTATTCTAGTTTCTGTAGTTGTTAAACGATTTTAATTTATGTACATATTGGTATTCCCACCAAAAATTGGGATGGAGTAATTATCTACTAATTGAGCTTGCTTTTTTTGTTGTCGAAAGTATTAAGCTTTATCTGCTTTGTTGAATTACTAATGGATTCTGTGTATGGTTATGTGTAGATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAGTAAGTTCTTTATCAGCACGTTCTTCAAATAAAAATTATGTAGCATTCTTATTTGGCCGTGACATGCTACTGTATTATTATGTGTTGTTAGATAATAGGGTTTTCCAGTTTCAGACCTCACTTGCGAGATTACACTGAATATGTTGTTGTAGATGAATTAATTAACCTTTGGACGTTATTAGTACAGAAAACTTAAAACTCGAGGTTCAATATTTCCTTGGAACTATGAGGTAGAAGTTGATGAAAAAGAGCTAACAAAAATGTGTTTTCATTGTGTGTGTATGACAACCACATATAGTAAGCTAACAATTACATCTGAATTGTATACTTAAGTTAGAAATGTCCATATAAACAATAGCACTAGGTGATTTCTTCTTGTCTACCCAAGTCTTGGTTAACATAGTTACTTGACAGCTGCGCCTGAGGAATTTCAAATTGACCTGGACATCACAGTTATTAAAGAAAAAGTTCATCAAGCCAATTATTTGTTGTATTTTTTGTAAATCCAGTTTAAGTGATCTATTGTCCAGATATTGTAATGATCTTAAGCTATATTATGCGTAGCACCTTCCTACTGTGTTATTGAAAGGGATTTTGATTTTCTTTCTTTCCAGAAAGAAGCACCTAAGGAGGAGGTAGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAGAATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGAGGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAAGAGGAGAAAGCTAGAATGCCAGATTCACCCTATACTAAACTGCTCAGAGCCAAAGGAACACACCCTGTTTGGTACTGATTACACTTGACTACTGGTATGGAGCTTCATAAAAAGCACGCTCTTTTGGAGCTTCAGATAATCAGGTCAAACAATGGAATTGAATAGTATTTTCTTGGCCAATGTGGTAAAAATTATCTGGTGATGTAATATTAAGCCTGTGGGGATGTTATCACGTATTTTTGTTAGTGTTAGCATAAAATAGTGTGCTTTGTCGGTAGGTTATAGGAGTTGCCATTTGTTCTGAATGTAAATATGGTTTGTTTTTGAAAATTATAATAGCAGTGAAGTTTCTAA</genome_strand>
        <mrna_strand>ATCTGTTTCTTTTTTTACAGAAACGATGATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAGCACCTAAGGAGGAGGTAGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAGAATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGAGGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAAGAGGAGAAAGCTAGAATGCCAGATTCACCCTATACTAAACTGCTCAGAGCCAAAGGAACACACCCTGTTTGGTACTGATTACACTTGACTACTGGTATGGAGCTTCATAAAAAGCACGCTCTTTTGGAGCTTCAGATAATCAGGTCAAACAATGGAATTGAATAGTATTTTCTTGGCCAATGTGGTAAAAATTATCTGGTGATGTAATATTAAGCCTGTGGGGATGTTATCACGTATTTTTGTTAGTGTTAGCATAAAATAGTGTGCTTTGTCGGTAGGTTATAGGAGTTGCCATTTGTTCTGAATGTAAATATGGTTTGTTTTTGAAAATTATAATAGCAGTGAAGTTTCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U591014" ref_strand="+" ref_description="SGN-U591014 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157340921|emb|CAO47726.1| (e_value=5e-25) unnamed; (*ATH) AT2G15890.2 (e_value=2e-22) |; ">
      <seq>atgttacaatcaatggctctcaattccttatcttctacttctctcgttggagttaataatgagcttcattcttcaagatttcaagtaaattcgtcgacaattcgttgttgttcaagaagtcatgcttacataccaaagctcgagccttttagcagaaccaagtttgatagagtttttaaagatccccctttgatcgaaaaatctgaaaatgaacttgccgattattgttctgttctagaaggtgatgattcttatagctgctggcaagcctattttgaactcaaagatcttgaagtaagttctttatcagcacgttcttcaaataaaaattatgtagcattcttatttggccgtgacatgctactgtattattatgtgttgttagataatagggttttccagtttcagacctcacttgcgagattacactgaatatgttgttgtagatgaattaattaacctttggacgttattagtacagaaaacttaaaactcgaggttcaatatttccttggaactatgaggtagaagttgatgaaaaagagctaacaaaaatgtgttttcattgtgtgtgtatgacaaccacatatagtaagctaacaattacatctgaattgtatacttaagttagaaatgtccatataaacaatagcactaggtgatttcttcttgtctacccaagtctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="82180" stop="83966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82480" g_stop="82699" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82700" i_stop="83200" i_length="501">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83201" g_stop="83666" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="686" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U591014" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82480" e_stop="82699"/>
          <exon e_start="83201" e_stop="83666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCGGTATTTCCCAGATCTTCTTTATTTCTTCATCGTTACGTTTCCTTTGTGTCTATTTTCTTGGATTTATCATCAGACACGAATTCAAGATTTGAAGTTCATGGGTTCTTGATTATTCATGAATCTTTTAACGAGAAAAAAAAATGTCCTTGTGTTAGTAAAAACAGGAACTGTAATTGGGGTTTAATACAATAATTACGTAGCTAGTGTAAATTTCACAAGTGCGGGCGGTTCAGGGAGGGTTGGAGTATATGCTGAAGATAGTGAGGCTGTTTCCCCTATGTTTAAAAAATTGTTAAAGATGATTAATTAATTAAATTTCTGATTTATTCTAGTTTCTGTAGTTGTTAAACGATTTTAATTTATGTACATATTGGTATTCCCACCAAAAATTGGGATGGAGTAATTATCTACTAATTGAGCTTGCTTTTTTTGTTGTCGAAAGTATTAAGCTTTATCTGCTTTGTTGAATTACTAATGGATTCTGTGTATGGTTATGTGTAGATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAGTAAGTTCTTTATCAGCACGTTCTTCAAATAAAAATTATGTAGCATTCTTATTTGGCCGTGACATGCTACTGTATTATTATGTGTTGTTAGATAATAGGGTTTTCCAGTTTCAGACCTCACTTGCGAGATTACACTGAATATGTTGTTGTAGATGAATTAATTAACCTTTGGACGTTATTAGTACAGAAAACTTAAAACTCGAGGTTCAATATTTCCTTGGAACTATGAGGTAGAAGTTGATGAAAAAGAGCTAACAAAAATGTGTTTTCATTGTGTGTGTATGACAACCACATATAGTAAGCTAACAATTACATCTGAATTGTATACTTAAGTTAGAAATGTCCATATAAACAATAGCACTAGGTGATTTCTTCTTGTCTACCCAAGTCTT</genome_strand>
        <mrna_strand>ATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAGTAAGTTCTTTATCAGCACGTTCTTCAAATAAAAATTATGTAGCATTCTTATTTGGCCGTGACATGCTACTGTATTATTATGTGTTGTTAGATAATAGGGTTTTCCAGTTTCAGACCTCACTTGCGAGATTACACTGAATATGTTGTTGTAGATGAATTAATTAACCTTTGGACGTTATTAGTACAGAAAACTTAAAACTCGAGGTTCAATATTTCCTTGGAACTATGAGGTAGAAGTTGATGAAAAAGAGCTAACAAAAATGTGTTTTCATTGTGTGTGTATGACAACCACATATAGTAAGCTAACAATTACATCTGAATTGTATACTTAAGTTAGAAATGTCCATATAAACAATAGCACTAGGTGATTTCTTCTTGTCTACCCAAGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582856" ref_strand="+" ref_description="SGN-U582856 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|5917664|gb|AAD55979.1|AF159296_1 (e_value=8e-127) extensin-like; (*ATH) AT3G19020.1 (e_value=6e-81)  Symbol: None | leucine-rich repeat family protein / extensin family protein, similar to extensin-like protein (Lycopersicon esculentum) gi:5917664:gb:AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTE... ; (*SWP) sp|Q8W3M4|Y4744_ARATH (e_value=3e-33) Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744; ">
      <seq>ggccttacccacaggtggacttacaaacatggtggccttgggttgctttctctttttccttgtatctttctgttctttttctccatcctattttgcattatctgatatcgaagctgcttctattgcccgtcgccaacttttaagtaacaatggccagctttcaaatacatacgagtctgaaatgaccattaacatgaaattcgaaaatgccaggttgaagaaagcttatgttgctcttcaggcatggaagaaatctatttactctgatccaacaaacttcacagctaattgggagggtagcaatgtatgtgcctataacggtgtcttttgtgacaatgctcttgatgatcccaacatctctggtggtgctgggattgatcttaaccacgcagacatagctggacatctccctgtggagcttggcctcttggctgatgtgagtctcatccacattaattctaacagattttgtggaatcattcccaagagcattacaaatcttacccttttggatgagattgatttcagcaacaatcgtttcgtggggccattccctgatgttgtgcttgagttgcctaaactcaactatcttgatcttaggttcaacgactttgaaggtcaagtaccttcctccctatttgagaagaatcttgatgcaatattgatcaacaataaccgattccattccaccatccctgaaagcttgggcaattccaatgcttccgtggtggtattggcaaataacaagttctatggttgcatcccgagcagtataggtaaaatgggcaactcattagatgagcttgtattcagaaacacgagctctctggttgtttgcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="85027" stop="86469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85327" g_stop="86169" g_length="843"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="842" r_length="842" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U582856" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85327" e_stop="86169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCTTACCCACAGGTGGACTTACAAACATGGTGGCCTTGGGTTGCTTTCTCTTTTTCCTTGTATCTTTCTGTTCTTTTTCTCCATCATATTTTGCATTATCTGATATCGAAGCTGCTTCTATTGCCCGTCGCCAACTTTTAAGTAACAATGGCCAGCTTTCAAATACATACGAGTCTGAAATGACCATTAACATGAAATTTGAAAATGCCAGGTTGAAGAAAGCTTATGTTGCTCTTCAGGCATGGAAGAAGTCTATTTACTCTGATCCAACAAACTTCACAGCTAATTGGGAGGGTAGCAATGTTTGTGCCTATAACGGTGTCTTTTGTGACAATGCTCTTGATGATCCCAACATCTCTGTTGTTGCTGGGATTGATCTTAACCATGCAGACATAGCTGGACATCTCCCTGTGGAGCTTGGCCTCTTGGCTGATGTGAGTCTCATCCACATTAATTCTAACAGATTTTGTGGAATCATTCCCAAGAGCATTACAAATCTTACCCTTTTGGATGAGATTGATTTCAGCAACAACCGTTTCGTGGGGCCATTCCCTGATGTTGTGCTTGAGTTGCCTAAGCTCAACTATCTTGATCTTAGGTTCAACGACTTTGAAGGTCAAGTACCTTCCGCCCTATTTGAGAAGAATCTTGATGCAATATTGATCAACAATAACCGATTCCATTCCACCATCCCTGAAAGCTTGGGCAATTCCAATGCTTCCGTGGTGGTATTGGCCAATAACAAGTTCTATGGTTGCATCCCGAGCAGTATAGGTAAAATGGGCAACTCATTAGATGAGCTTGTATTCACCAACAACGAGCTCTCTGGTTGTTTGCCTGA</genome_strand>
        <mrna_strand>GGCCTTACCCACAGGTGGACTTACAAACATGGTGGCCTTGGGTTGCTTTCTCTTTTTCCTTGTATCTTTCTGTTCTTTTTCTCCATCCTATTTTGCATTATCTGATATCGAAGCTGCTTCTATTGCCCGTCGCCAACTTTTAAGTAACAATGGCCAGCTTTCAAATACATACGAGTCTGAAATGACCATTAACATGAAATTCGAAAATGCCAGGTTGAAGAAAGCTTATGTTGCTCTTCAGGCATGGAAGAAATCTATTTACTCTGATCCAACAAACTTCACAGCTAATTGGGAGGGTAGCAATGTATGTGCCTATAACGGTGTCTTTTGTGACAATGCTCTTGATGATCCCAACATCTCTGGTGGTGCTGGGATTGATCTTAACCACGCAGACATAGCTGGACATCTCCCTGTGGAGCTTGGCCTCTTGGCTGATGTGAGTCTCATCCACATTAATTCTAACAGATTTTGTGGAATCATTCCCAAGAGCATTACAAATCTTACCCTTTTGGATGAGATTGATTTCAGCAACAATCGTTTCGTGGGGCCATTCCCTGATGTTGTGCTTGAGTTGCCTAAACTCAACTATCTTGATCTTAGGTTCAACGACTTTGAAGGTCAAGTACCTTCCTCCCTATTTGAGAAGAATCTTGATGCAATATTGATCAACAATAACCGATTCCATTCCACCATCCCTGAAAGCTTGGGCAATTCCAATGCTTCCGTGGTGGTATTGGCAAATAACAAGTTCTATGGTTGCATCCCGAGCAGTATAGGTAAAATGGGCAACTCATTAGATGAGCTTGTATTCAGAAAC-ACGAGCTCTCTGGTTGTTTGCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572501" ref_strand="+" ref_description="SGN-U572501 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>acaattgataatgtaaatgtttttttttcaattgatatgtgtgtttacagattgattggtacacatttgttatgtagtttttgtgccattgaaatcagaatggcgatcctcttaataaccttggaaaattggtggtggtggtgaggcgtatagcgagcccaatgttgggggaagagcgacatcctcaaaagtgggtggaggtggagacattaccggagctggtggtggtggtggagagtggactggcggtggaggagagaataccggagcaggtggaggtgagtgaactggtggtggaggtgagtggactggcggtggtggtgagtggactggtggtggaggtgaatgtattcgcggagtaggagagttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="87944" stop="86570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87644" g_stop="87302" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U572501" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87644" e_stop="87302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTGATAATGTAAATGTTTGTTTTTTCAGTTGATATGTGTGTTTACAGATTGATTGGTACACATTTTTTATGTAGTTTTTGTGCCATTGAAATCAGAATGGCGATCCTCTTAATAACCTTGGAAAATTGGTGGTGGTGGTGAGGCGTATAGCGAGCCCAATGTTGGGGGAAGAGCGACATCCTCAAAAGTGGGTGGAGGTGGAGACATTACGGGAGC---TGGTGGTGGTGGAGAGTGGACTGGCGGTGGAGGAGAGAATACCAGAGCAGGTGGAGGTGAGGCGACTGGTGGTGGAGGTGAGTGGACTGGTGGTGGTGGTGAATGGACTGGTGGTGGTGGTGA</genome_strand>
        <mrna_strand>ACAATTGATAATGTAAATGTTT-TTTTTTCAATTGATATGTGTGTTTACAGATTGATTGGTACACATTTGTTATGTAGTTTTTGTGCCATTGAAATCAGAATGGCGATCCTCTTAATAACCTTGGAAAATTGGTGGTGGTGGTGAGGCGTATAGCGAGCCCAATGTTGGGGGAAGAGCGACATCCTCAAAAGTGGGTGGAGGTGGAGACATTACCGGAGCTGGTGGTGGTGGTGGAGAGTGGACTGGCGGTGGAGGAGAGAATACCGGAGCAGGTGGAGGTGAGTGAACTGGTGGTGGAGGTGAGTGGACTGGCGGTGGTGGTGAGTGGACTGGTGGTGGAGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566278" ref_strand="+" ref_description="SGN-U566278 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|157340922|emb|CAO47727.1| (e_value=3e-151) unnamed; (*ATH) AT2G15860.1 (e_value=2e-133) | Symbol: None | expressed protein, and genefinder | chr2:6912470-6916477 REVERSE | Aliases: F19G14.14, F19G14_14; ">
      <seq>gtaacctaatttttgtgagaccaaatacaacgccgggtcgggtcagcagtgcggtgtaatagtaatacgacgtcgcttcagaagcacgtttgaactttcacaactagatcgcgaacattatcaatttggttattcggtgaaaatcaatagctacatcgacgctacgattttctcagatggtggacgacacgacgaagcctccgactgaagcgattgttgaaaagcaagaagaagctcagccacctccggtaccagaagtcgctggcggtggtggaggatggggaggatggggattttctgcgttttcttatatctcggacattcagaaagctgctaccaccgctgccgaagagatctcccgcaatgccgttgaagctgctaaatcagctgcaaagagccttgcagatgtgcaaaattctctggaagacaccgaatccttgaaagaggatgaacgagaagtattggttgaagaggagagtgaagatgagaatgataaaaaacgtaaggctgctcttgaaaaattagagaaagctagtgaagactcgttgcttggccagggtttgagagttattgaccattctgtcgagaatttcgcttcaggagcttggcaagcattaggaaatgcattcaaaggaagttctgatttagtccacaagcttgaaaattcggctgcaagtattgctgaatcagttcagcatggtggcttacctgccacaactggttctgttgcaccatccatactagagactgggaaagcttttactgctaaaggaatgcatgtgcttgagctacttggaaaagaaactatggatcttctgatctcagaaactggtattagagttgattcaggctccaaagaagggggaggagaaacagatgaagatcagttttatgaaaaagttacatttgatagatgcttttatatttatggaggtcccgagcaattggaggagttggaggcattgtccaaccattatgctttgttgttcaacagaagaaaagcgaagattccatctgatcaaaggtcttcgtatgatggaaaatttaaagaggttcaagagatttttgacttgagttctgaagcatatgaaagtggtaaagagtcgggaaaaggaaaggaagttgaaactggcattgcagacagcacagatgaggtgaagaatttgcatgattctagtgtggacaaggctgcagaattggcagcaggatttacaaatgttttggttggactagctcctaatgacatggttcaaaggactgctcgaagactggatactcttcattcagagggtgttcatagactttcagagttgtgttgttttgctgcgactcaacttgtaatgcttgggaaatcaatcatttcaactgcaaataaagttggggaccaagatgcaaatgtggaaattctgaaaatggaatggccggaggattcaattgaaagagctaaggtaatccgatcaaaggcatgttcaatgactcgatgtgttgaaacagtttcttccagcttcattacagggatatctgaagtgtctgaagcgtatttagcagcagtgaagagtgtatctgctgattcacatgaggttccacagaaatcaatccaggagaaggccaatgcatatgctgagaatcttcgtgctgctcatagcacagccatgggcaaaattcaggacggccttcaatatttaccctatgtggtcatctcaacctcaatgcctgctgcttgaagaatttctcaatgcaaaatttcacacttagtccttcctccttttagctttccttttgctctcgccccgccctcctctctttcgtgtaaataactgtacttggttagtttccatatccctttatccctttgagacttgtaaaatctgggagtgctgacttgtgtgatagactgatatctctattaactcttagctacagagagtatactttcctttctgtttttatctaaaggaaataaataaattttattttattgaagaaaaaaagaaattttaaataacgccaccacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="87997" stop="93805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88297" g_stop="88661" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88662" i_stop="89701" i_length="1040">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89702" g_stop="89893" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="557" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89894" i_stop="90100" i_length="207">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90101" g_stop="90198" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="655" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90199" i_stop="90862" i_length="664">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90863" g_stop="90953" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="746" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90954" i_stop="91037" i_length="84">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91038" g_stop="91241" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="950" r_length="204" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91242" i_stop="91324" i_length="83">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91325" g_stop="91581" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="951" r_stop="1207" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91582" i_stop="92015" i_length="434">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92016" g_stop="92106" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1208" r_stop="1298" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="92107" i_stop="92220" i_length="114">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.255" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="92221" g_stop="92437" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1299" r_stop="1515" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="92438" i_stop="93034" i_length="597">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="93035" g_stop="93504" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1516" r_stop="1985" r_length="470" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U566278" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1985</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88297" e_stop="88661"/>
          <exon e_start="89702" e_stop="89893"/>
          <exon e_start="90101" e_stop="90198"/>
          <exon e_start="90863" e_stop="90953"/>
          <exon e_start="91038" e_stop="91241"/>
          <exon e_start="91325" e_stop="91581"/>
          <exon e_start="92016" e_stop="92106"/>
          <exon e_start="92221" e_stop="92437"/>
          <exon e_start="93035" e_stop="93504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAACCTAATTTTTGTGAGACCAAATACAACGCCGGGTCGGGTCAGCAGTGCGGTGTAATAGTAATACGACGTCGCTTCAGAAGCACGTTTGAACTTTCACAACTAGATCGCGAACATTATCAATTTGGTTATTCGGTGAAAATCAATAGCTACATCGACGCTACGATTTTCTCAGATGGTGGACGACACGACGAAGCCTCCGACTGAAGCGATTGTTGAAAAGCAAGAAGAAGCTCAGCCACCTCCGGTACCAGAAGTCGCTGGCGGTGGTGGAGGATGGGGAGGATGGGGATTTTCTGCGTTTTCTTATATCTCGGACATTCAGAAAGCTGCTACCACCGCTGCCGAAGAGATCTCCCGCAATGTACTCGTCTTTCCTAGCATTTCTTAACTTCAATTTTCTCCTTTTATTTTTGCATTTATAATGTAGATTGTAGCTGTTTTTCTTATCTCGTTGATCTTGCTAATTAGATTTCTTTACTTTGTTTTAATAGTCGTTTTTAATGTAAGAAACCTTTTTGATCTTGTTTGCTGTATTTCTTTTGGGTACTAATGAGATGTGATGATTGTTAGGCGCAACTTCACCAGTTATGTGAATGAACTATGAGTAATTTCACCTTCATTTTTTTCTTCAAATTTGTGAAAAAACAGTGTCTACTGGCTCTACCATCCGATCTAGAAATTAGACAATTGGACTCCCCTTTCAGTAATTGCTACATATCACAATTTTTGCAATGTCTCTACTGAAAGATAGATGCCTAAGATTGCTGTATGATATCAGTGATAGTTGAGCATTCGGAGTATTTTGTGTTGAGGCTGCAGTTGGATAAATCCTCTAGGGGAGCATGTGTAGTTCTACATCATTGCTACAAATTACTGTGATATGTTTCTGCAATGGTCGTCAGCAACACTATAGTTGAAATTTGGTCTTTTTGTACTTGGAAAGTGTCATAGTGATGCAGAAACCCAAAGGAAATCTTCTATATTTGGATACTGGTAAGCATGTAGCTAATTTGTTGTACTATTTTCTCTGATGCACACCTGTGGCTGGTTTGCCTGTTTATTTAAGCAAAGTGAATTAGTGATATGATCCCTTCAAATTTCTGTAATGAAAGGGATTTAATTATGTATTGGTGCTTGAGAGTAGTATCGTAACTTGATGTAATCCAAACACCAAGTCCTATCACTAGATTGCATGCCATTTGAATTTAGTTATTTCTTTTCCTTTCACCTACACGTTAATTGAGCGTTAGAACTTAAAATGAGTTGAGGCCCTCAGATTAATAAACTCTTGGTTGACAATTCTTGGTACTTTTTCTTTGTTTTTATGGCAGGATTGCACACTTAAATATACACCTTGAATGTCTCCATGCATTATATTTATATGCCTTTTCACTTTTGCAGGCCGTTGAAGCTGCTAAATCAGCTGCAAAGAGCCTTGCAGATGTGCAAAATTCTCTGGAAGACACCGAATCCTTGAAAGAGGATGAACGAGAAGTATTGGTTGAAGAGGAGAGTGAAGATGAGAATGATAAAAAACGTAAGGCTGCTCTTGAAAAATTAGAGAAAGCTAGTGAAGACTCGTTGCTTGGCCAGGCAAGTGCTACCAAATTAGTTGTGCTGCTTACTTGACTCAATAGGGGATCCAATTTTTATTTTTTAGACGTTCTTCTTGAGCATTGATATCCCTTCCACAATCGACCCCCATTTTTTGCTAATTTGTACAAAAGTATCTTAAGGTTAGAAGTAGATATGCCATAATTGTTTGGTATGGTCATGTTTTTCACCTTCCAAAATGTGCAGGGTTTGAGAGTTATTGACCATTCTGTCGAGAATTTCGCTTCAGGAGCTTGGCAAGCATTAGGAAATGCATTCAAAGGAAGTTCTGATTTAGTCCACAAGTATGTCTTCTTGTGTATGATTGCGACGTGATAGTTGAATAAAACTAAACTTTACTTGATCAAAAGAAAAAAAACTGATTGCAACACGAATGTTATTTTTCTTACTCCCGTTCGCTGGAACCTTCACCAAACAGGGGTGTCTGCCCAGCTACTTCATAGCATGTTTTTAGATTTACTTTAAGCAGTTGCTCATCTTGTGTTTGAAAAGAATTGCTGTATTTAATGGAGCTGATTGTTGTGGGACAAAATGGGAGTTTGTTTTTGTTGACTTTTATAGTTCATTTTGCTTAGTTTTATGATTTTGACACATGAATTGGTGAATATTTCCTCTGGCAAATTAGGTGAAAAAATGACCTGGCATAAAAGAAATTTTATGTTTGCATATCTCTGGACTAGAGAAGTAGTCACAAACTACAACTGTCTGGAAACATGAAAATAAGAACCTCCCCATTAACATGAGAACTTTGGGCTCCTGCAATGTTAGTTTTGGAGTCCTCGTAAGTACGAAAGGACAGTAGGACTGACTGATCTTCTTTTGTAAATTTGGACCAAGTAGAATTTTATGCTGACGAATCTACTGTTACCAATTTCTGTTATCTGCTTATTCCTTCGTTGAGTAATGCCAAAGTTTCCAAGCAAATGTCATTTTGCCTTTTGTTTTCAGGCTTGAAAATTCGGCTGCAAGTATTGCTGAATCAGTTCAGCATGGTGGCTTACCTGCCACAACTGGTTCTGTTGCACCATCCATACTAGAGGTTTGCATAAGATTTAATTTCATTATTTTTGGGCAGGTGGAGTGTGTTTTAGCCGCTATTTTTATTGTGCACAATTTCTTGCAGACTGGGAAAGCTTTTACTGCTAAAGGAATGCATGTGCTTGAGCTACTTGGAAAAGAAACTATGGATCTTCTGATCTCAGAAACTGGTATTAGAGTTGATTCAGGCTCCAAAGAAGGGGGAGGAGAAACAGATGAAGATCAGTTTTATGAAGAAGTTACATTTGATAGATGCTTTTATATTTATGGAGGTCCCGAGCAATTGGAGGTCAGGTCCTACTCATATTGATCTTTGTACTTGGTTGAGTTTGTTCTGGAAATTCAGTGTCTTATCATGTGAATTACACGCAGGAGTTGGAGGCATTGTCCAACCATTATGCTTTGTTGTTCAACAGAAGAAAAGCGAAGATTCCATCTGATCAAAGGTCTTCGTATGATGGAAAATTTAAAGAGGTTCAAGAGATTTTTGACTTGAGTTCTGAAGCATATGAAAGTGGTAAAGAGTCGGGAAAAGGAAAGGAAGTTGAAACTGGCATTGCAGACAGCACAGATGAGGTGAAGAATTTGCATGATTCTAGTGTGGACAAGGCTGCAGAATTGGCAGCAGGGTAAATATTTAACTTTAATATGCTTTACCTTTTAGTTAATTTTCTTCTACTTTAATATGTTCTGGAGAAATATATGGGAACAAAAGAAAATGCGATTGAGATGTTGACAGTTCATGAATCCAAGCACTAAAGGGCCTGTTTGGATGGACTTGTAAAAATTAACTGATAAGTCAGAAGTCACAATTACATGGTACCCTACTTTTGACTTATTTTTTAAAAAAATTTGGCCTAAAAGTGGATGCTTAAAATACTTTATAACCTTTCCAAACACCTCCAAAACTAAAAAACTACTTAAAAGTCAAAAGACCTAAAAGTAAGTTTATCCAAACGGGCACTAAATTCTTGTGCTTAGTAGAGTGATTATCTTTGAGTTTGTGTCTAGTTGGTAAAAACTGGGATACTGGTGTTAATTTCTGGATTTCATTGAATTGCAGATTTACAAATGTTTTGGTTGGACTAGCTCCTAATGACATGGTTCAAAGGACTGCTCGAAGACTGGATACTCTTCATTCAGAGGGTGTTCATGTATGTAAATTTTTAGTTAGTCTGCAACCTTTTTTTTAATCAAAGAAACTAGCTTCTTCTTCTTGGGAGTAATGAATTAACTTGACTTCTCACTGATTGTTCTTATGTACATAGAGACTTTCAGAGTTGTGTTGTTTTGCTGCGACTCAACTTGTAATGCTTGGGAAATCAATCATTTCAACTGCAAATAAAGTTGGGGACCAAGATGCAAATGTGGAAATTCTGAAAATGGAATGGCCGGAGGATTCAATTGAAAGAGCTAAGGTAATCCGATCAAAGGCATGTTCAATGACTCGATGTGTTGAAACAGTTTCTTCCAGCTTCATTACAGGTAGATCTTTGTCAAACATATACTTCTATGCATTTATGACTTTTATATTGTTTCTTTATTCCCTTCCTAGTAATTTCATCTGTAGTTCATTGTTTCTGCATCTAATATTGATAGATGACCAACCCATGTATGATCTCTAGTTTGAAAAGATCATCAAACGAAGATCAGAAGCACATGGGTAGGAATTCGAGGATTATTTACAAATAAAGTAGTTTTTATGATTTACGGTACTTTTTGTTTTGCATTTGTTACGGTAATTTAGTTTTTTTAGGTGTTCTCGTAAATATTTTGGAATATAACTATGAGAACTGCGCTGTTTAGTGATTGTTAATTCAACTGATGATGGGGTTTTCTGCTCACGAATTCAAAATTACTGGTCTGATAATGTTGAAATGAGGTGATTGAATTTGTAGAAAGGTTTGCCTTCCTTGAGACTGTTTTGTCTACCCGTGGTATGGATAACACGTTAAGGAACAGTTCAGCTGATTTTTCCTATGGAACATGTTTCCTCATGATATATCTTGTTCTTGGTGTAAAAAGGTTGGGTTAAGTGGATGACGTCTATCTCTCTTAATTAGCTTCGTTATGCCTTTGCAGGGATATCTGAAGTGTCTGAAGCGTATTTAGCAGCAGTGAAGAGTGTATCTGCTGATTCACATGAGGTTCCACAGAAATCAATCCAGGAGAAGGCCAATGCATATGCTGAGAATCTTCGTGCTGCTCATAGCACAGCCATGGGCAAAATTCAGGACGGCCTTCAATATTTACCCTATGTGGTCATCTCAACCTCAATGCCTGCTGCTTGAAGAATTTCTCAATGCAAAATTTCACACTTAGTCCTTCCTCCTTTTAGCTTTCCTTTTGCTCTCGCCCCGCCCTCCTCTCTTTCGTGTAAATAACTGTACTTGGTTAGTTTCCATATCCCTTTATCCCTTTGAGACTTGTAAAATCTGGGAGTGCTGACTTGTGTGATAGACTGATATCTCTATTAACTCTTAGCTACAGAGAGTATACTTTCCTTTCTGTTTTTATCTAAAGGAAATAAATAAATTTTATTTTATTGAAGA</genome_strand>
        <mrna_strand>GTAACCTAATTTTTGTGAGACCAAATACAACGCCGGGTCGGGTCAGCAGTGCGGTGTAATAGTAATACGACGTCGCTTCAGAAGCACGTTTGAACTTTCACAACTAGATCGCGAACATTATCAATTTGGTTATTCGGTGAAAATCAATAGCTACATCGACGCTACGATTTTCTCAGATGGTGGACGACACGACGAAGCCTCCGACTGAAGCGATTGTTGAAAAGCAAGAAGAAGCTCAGCCACCTCCGGTACCAGAAGTCGCTGGCGGTGGTGGAGGATGGGGAGGATGGGGATTTTCTGCGTTTTCTTATATCTCGGACATTCAGAAAGCTGCTACCACCGCTGCCGAAGAGATCTCCCGCAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTTGAAGCTGCTAAATCAGCTGCAAAGAGCCTTGCAGATGTGCAAAATTCTCTGGAAGACACCGAATCCTTGAAAGAGGATGAACGAGAAGTATTGGTTGAAGAGGAGAGTGAAGATGAGAATGATAAAAAACGTAAGGCTGCTCTTGAAAAATTAGAGAAAGCTAGTGAAGACTCGTTGCTTGGCCAG...............................................................................................................................................................................................................GGTTTGAGAGTTATTGACCATTCTGTCGAGAATTTCGCTTCAGGAGCTTGGCAAGCATTAGGAAATGCATTCAAAGGAAGTTCTGATTTAGTCCACAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAAAATTCGGCTGCAAGTATTGCTGAATCAGTTCAGCATGGTGGCTTACCTGCCACAACTGGTTCTGTTGCACCATCCATACTAGAG....................................................................................ACTGGGAAAGCTTTTACTGCTAAAGGAATGCATGTGCTTGAGCTACTTGGAAAAGAAACTATGGATCTTCTGATCTCAGAAACTGGTATTAGAGTTGATTCAGGCTCCAAAGAAGGGGGAGGAGAAACAGATGAAGATCAGTTTTATGAAAAAGTTACATTTGATAGATGCTTTTATATTTATGGAGGTCCCGAGCAATTGGAG...................................................................................GAGTTGGAGGCATTGTCCAACCATTATGCTTTGTTGTTCAACAGAAGAAAAGCGAAGATTCCATCTGATCAAAGGTCTTCGTATGATGGAAAATTTAAAGAGGTTCAAGAGATTTTTGACTTGAGTTCTGAAGCATATGAAAGTGGTAAAGAGTCGGGAAAAGGAAAGGAAGTTGAAACTGGCATTGCAGACAGCACAGATGAGGTGAAGAATTTGCATGATTCTAGTGTGGACAAGGCTGCAGAATTGGCAGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACAAATGTTTTGGTTGGACTAGCTCCTAATGACATGGTTCAAAGGACTGCTCGAAGACTGGATACTCTTCATTCAGAGGGTGTTCAT..................................................................................................................AGACTTTCAGAGTTGTGTTGTTTTGCTGCGACTCAACTTGTAATGCTTGGGAAATCAATCATTTCAACTGCAAATAAAGTTGGGGACCAAGATGCAAATGTGGAAATTCTGAAAATGGAATGGCCGGAGGATTCAATTGAAAGAGCTAAGGTAATCCGATCAAAGGCATGTTCAATGACTCGATGTGTTGAAACAGTTTCTTCCAGCTTCATTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCTGAAGTGTCTGAAGCGTATTTAGCAGCAGTGAAGAGTGTATCTGCTGATTCACATGAGGTTCCACAGAAATCAATCCAGGAGAAGGCCAATGCATATGCTGAGAATCTTCGTGCTGCTCATAGCACAGCCATGGGCAAAATTCAGGACGGCCTTCAATATTTACCCTATGTGGTCATCTCAACCTCAATGCCTGCTGCTTGAAGAATTTCTCAATGCAAAATTTCACACTTAGTCCTTCCTCCTTTTAGCTTTCCTTTTGCTCTCGCCCCGCCCTCCTCTCTTTCGTGTAAATAACTGTACTTGGTTAGTTTCCATATCCCTTTATCCCTTTGAGACTTGTAAAATCTGGGAGTGCTGACTTGTGTGATAGACTGATATCTCTATTAACTCTTAGCTACAGAGAGTATACTTTCCTTTCTGTTTTTATCTAAAGGAAATAAATAAATTTTATTTTATTGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595307" ref_strand="+" ref_description="SGN-U595307 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gatcgacgctacgattttctcagatggtggacgagacgacgaagcctccgactgaggcgattgttgaaaagcaagaagaagctcagccacctccggtaccagaagtcgctggcggtggtggaggatggggaggatggggattttctgcgtacacttatgtctcggacattcataaagctggtacgcaccgatgccggagagatctaccgcactgccgttgaagctgctaaatcagctgctaagagccttgcagatgtgcaaaattttttggaagacaccgaatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="88151" stop="90074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88450" g_stop="88661" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88662" i_stop="89701" i_length="1040">
            <donor d_prob="0.976" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89702" g_stop="89774" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="286" r_length="73" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U595307" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>285</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88450" e_stop="88661"/>
          <exon e_start="89702" e_stop="89774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGACGCTACGATTTTCTCAGATGGTGGACGACACGACGAAGCCTCCGACTGAAGCGATTGTTGAAAAGCAAGAAGAAGCTCAGCCACCTCCGGTACCAGAAGTCGCTGGCGGTGGTGGAGGATGGGGAGGATGGGGATTTTCTGCGTTTTCTTATATCTCGGACATTCAGAAAGCTGCTAC-CACCGCTGCCGAAGAGATCTCCCGCAATGTACTCGTCTTTCCTAGCATTTCTTAACTTCAATTTTCTCCTTTTATTTTTGCATTTATAATGTAGATTGTAGCTGTTTTTCTTATCTCGTTGATCTTGCTAATTAGATTTCTTTACTTTGTTTTAATAGTCGTTTTTAATGTAAGAAACCTTTTTGATCTTGTTTGCTGTATTTCTTTTGGGTACTAATGAGATGTGATGATTGTTAGGCGCAACTTCACCAGTTATGTGAATGAACTATGAGTAATTTCACCTTCATTTTTTTCTTCAAATTTGTGAAAAAACAGTGTCTACTGGCTCTACCATCCGATCTAGAAATTAGACAATTGGACTCCCCTTTCAGTAATTGCTACATATCACAATTTTTGCAATGTCTCTACTGAAAGATAGATGCCTAAGATTGCTGTATGATATCAGTGATAGTTGAGCATTCGGAGTATTTTGTGTTGAGGCTGCAGTTGGATAAATCCTCTAGGGGAGCATGTGTAGTTCTACATCATTGCTACAAATTACTGTGATATGTTTCTGCAATGGTCGTCAGCAACACTATAGTTGAAATTTGGTCTTTTTGTACTTGGAAAGTGTCATAGTGATGCAGAAACCCAAAGGAAATCTTCTATATTTGGATACTGGTAAGCATGTAGCTAATTTGTTGTACTATTTTCTCTGATGCACACCTGTGGCTGGTTTGCCTGTTTATTTAAGCAAAGTGAATTAGTGATATGATCCCTTCAAATTTCTGTAATGAAAGGGATTTAATTATGTATTGGTGCTTGAGAGTAGTATCGTAACTTGATGTAATCCAAACACCAAGTCCTATCACTAGATTGCATGCCATTTGAATTTAGTTATTTCTTTTCCTTTCACCTACACGTTAATTGAGCGTTAGAACTTAAAATGAGTTGAGGCCCTCAGATTAATAAACTCTTGGTTGACAATTCTTGGTACTTTTTCTTTGTTTTTATGGCAGGATTGCACACTTAAATATACACCTTGAATGTCTCCATGCATTATATTTATATGCCTTTTCACTTTTGCAGGCCGTTGAAGCTGCTAAATCAGCTGCAAAGAGCCTTGCAGATGTGCAAAATTCTCTGGAAGACACCGAATCCT</genome_strand>
        <mrna_strand>GATCGACGCTACGATTTTCTCAGATGGTGGACGAGACGACGAAGCCTCCGACTGAGGCGATTGTTGAAAAGCAAGAAGAAGCTCAGCCACCTCCGGTACCAGAAGTCGCTGGCGGTGGTGGAGGATGGGGAGGATGGGGATTTTCTGCGTACACTTATGTCTCGGACATTCATAAAGCTGGTACGCACCGATGCCGGAGAGATCTACCGCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTTGAAGCTGCTAAATCAGCTGCTAAGAGCCTTGCAGATGTGCAAAATTTTTTGGAAGACACCGAATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585450" ref_strand="+" ref_description="SGN-U585450 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|147860285|emb|CAN83555.1| (e_value=3e-122) hypothetical; (*ATH) AT3G19000.1 (e_value=7e-112)  Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to SP:P24397 Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine 6-beta- hydroxylase) {Hyoscyamus niger}, SP:Q05965 Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)... ; (*SWP) sp|Q05965|FL3H_MATIN (e_value=7e-42) Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT; ">
      <seq>ggggctctcacttgtaacaaagaaaaaaagaagaagaagaaagtgaaatatctatcatggaaaatatggatgaatccttttttcaagaaacagagcacaggccaaaacagagtacaattgaggcagaagacatacccataattgatctctctcccattctgacctctgattcttcagaaattacaaatcttgttgcacaaattggtgatgcatgcaagaaatggggtttctttcaagtaatcaaccatggagttccatctacctgtcgccaaaaaatagagagagcatcaaaggaattcttcttgcttcctactgaagagaagaggaaagtgagtagagatgaagataaccctatggggttttatgatacagagcataccaagaatgttagggattggaaagaagtttttgattttgttgtggagaatccaactctcttgcctgcttctcatgaaccccatgatacggagctcagggaactgaagaatcaatggcctgatttccctaacaatttcagggaggcgtgtgaagaatatgctcgaggcattgagaaattgtcctacaagttgctagaattaattgctctaagcttaggcctgtcatccaaaaggctgaacaactactttaaggaccaaacaagttttatgcgattaaattactatccgctatgcccaattcatcatttggctttgggagttgggcggcacaaggatcctggtgccctgactgttcttgcacaagatgatgttggaggcctcgaggtgaaacgcaaggcagatggagagtggatacaagtgaaaccaactccagatgcttatattatcaatgttggtgacataattcaggtttggagcaatgacagatatgaaagtgtcgaacatagggtgatagcaagctccaacaaagagagattctccgttccatttttcttcaacccgtctcactatgtaatggttgagcctctggaagagcttacgaatgaagaaagtccagcaaaatacaaggcttacaactgggggaaaatttttcactacaagaaacccttagcaatttcaagaaacttaatgttgagaacattcaaatatatcactttacaaatggtgacctgtaaatgacaaatgtactgtatgggaagtattattaaggtgttattttcagctggaaggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="93475" stop="95513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93771" g_stop="94286" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94287" i_stop="94494" i_length="208">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94495" g_stop="94822" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="845" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94823" i_stop="94891" i_length="69">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94892" g_stop="95213" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="846" r_stop="1170" r_length="325" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U585450" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>1166</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93771" e_stop="94286"/>
          <exon e_start="94495" e_stop="94822"/>
          <exon e_start="94892" e_stop="95213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTCTCACTTGTAACAAA-AAAAAAAGAAGAAGAAGAAAGTGAAATATCTATCATGGAAAATATGGATGAATCCTTTTTTCAAGAAACAGAGCACAGGCCAAAACAGAGTACAATTGAGGCAGAAGACATACCCATAATTGATCTCTCTCCCATTCTGACCTCTGATTCTTCAGAAATTACAAATCTTGTTGCACAAATTGGTGATGCATGCAAGAAATGGGGTTTCTTTCAAGTAATCAACCATGGAGTTCCATCTACCTGTCGCCAAAAAATAGAGAGAGCATCAAAGGAATTCTTCTTGCTTCCTACTGAAGAGAAGAGGAAAGTGAGTAGAGATGAAGATAACCCTATGGGGTTTTATGATACAGAGCATACCAAGAATGTTAGGGATTGGAAAGAAGTTTTTGATTTTGTTGTGGAGAATCCAACTCTCTTGCCTGCTTCTCATGAACCCCATGATACGGAGCTCAGGGAACTGAAGAATCAATGGCCTGATTTCCCTAACAATTTCAGGTATTTTGACTGGGCATGGAATTTATGAATCTAGTGGAAAACTTACTAGGGTTAATTTTATTTTCTCCTCATCAATTTTTGTTCCAAACTTACTGGGTGTGCCCCATTTTCCCCCTTTTCAGTTTTTGAGACATCATAGATTGTATCGTATCAATAGGTGCTTTTAGAATTGATTCTATGATCTAATGGAGTAGTTTGGAATTTACAGGGAGGCGTGTGAAGAATATGCTCGAGGCATTGAGAAATTGTCCTACAAGTTGCTAGAATTAATTGCTCTAAGCTTAGGCCTGTCATCCAAAAGGCTGAACAACTACTTTAAGGACCAAACAAGTTTTATGCGATTAAATTACTATCCGCTATGCCCAATTCATCATTTGGCTTTGGGAGTTGGGCGGCACAAGGATCCTGGTGCCCTGACTGTTCTTGCACAAGATGATGTTGGAGGCCTCGAGGTGAAACGCAAGGCAGATGGAGAGTGGATACAAGTGAAACCAACTCCAGATGCTTATATTATCAATGTTGGTGACATAATTCAGGTATGACTACTGTAACAATTCTTGATAGAAAAGCAAAATACTTCCAACTGAGCCAAAAACTTTTCACAGGTTTGGAGCAATGACAGATATGAAAGTGTCGAACATAGGGTGATAGCAAGCTCCAACAAAGAGAGATTCTCCGTTCCATTTTTCTTCAACCCGTCTCACTATGTAATGGTTGAGCCTCTGGAAGAGCTTACGAATGAAGAAAGTCCAGCAAAATACAAGGCTTACAACT-GGGGAAAATTTTTCACTACAAGAAA-CCTTAGCAATTTCAAGAAACTTAATGTTGAGAACATTCAAATATATCACTTTAGAAATGGTGACCTGT-AATGACAAATGTAGTGTATGGGAAGTATTATTAAGGTGTTATTTTCAGCTGGAAGGAAAT</genome_strand>
        <mrna_strand>GGGGCTCTCACTTGTAACAAAGAAAAAAAGAAGAAGAAGAAAGTGAAATATCTATCATGGAAAATATGGATGAATCCTTTTTTCAAGAAACAGAGCACAGGCCAAAACAGAGTACAATTGAGGCAGAAGACATACCCATAATTGATCTCTCTCCCATTCTGACCTCTGATTCTTCAGAAATTACAAATCTTGTTGCACAAATTGGTGATGCATGCAAGAAATGGGGTTTCTTTCAAGTAATCAACCATGGAGTTCCATCTACCTGTCGCCAAAAAATAGAGAGAGCATCAAAGGAATTCTTCTTGCTTCCTACTGAAGAGAAGAGGAAAGTGAGTAGAGATGAAGATAACCCTATGGGGTTTTATGATACAGAGCATACCAAGAATGTTAGGGATTGGAAAGAAGTTTTTGATTTTGTTGTGGAGAATCCAACTCTCTTGCCTGCTTCTCATGAACCCCATGATACGGAGCTCAGGGAACTGAAGAATCAATGGCCTGATTTCCCTAACAATTTCAG................................................................................................................................................................................................................GGAGGCGTGTGAAGAATATGCTCGAGGCATTGAGAAATTGTCCTACAAGTTGCTAGAATTAATTGCTCTAAGCTTAGGCCTGTCATCCAAAAGGCTGAACAACTACTTTAAGGACCAAACAAGTTTTATGCGATTAAATTACTATCCGCTATGCCCAATTCATCATTTGGCTTTGGGAGTTGGGCGGCACAAGGATCCTGGTGCCCTGACTGTTCTTGCACAAGATGATGTTGGAGGCCTCGAGGTGAAACGCAAGGCAGATGGAGAGTGGATACAAGTGAAACCAACTCCAGATGCTTATATTATCAATGTTGGTGACATAATTCAG.....................................................................GTTTGGAGCAATGACAGATATGAAAGTGTCGAACATAGGGTGATAGCAAGCTCCAACAAAGAGAGATTCTCCGTTCCATTTTTCTTCAACCCGTCTCACTATGTAATGGTTGAGCCTCTGGAAGAGCTTACGAATGAAGAAAGTCCAGCAAAATACAAGGCTTACAACTGGGGGAAAATTTTTCACTACAAGAAACCCTTAGCAATTTCAAGAAACTTAATGTTGAGAACATTCAAATATATCACTTTACAAATGGTGACCTGTAAATGACAAATGTACTGTATGGGAAGTATTATTAAGGTGTTATTTTCAGCTGGAAGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584240" ref_strand="+" ref_description="SGN-U584240 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>ggctgaagaacaagaagagatgcacaaaaaagtcattgttatcaattagttccaaagaacaaattgatgttaacaaagtgggcacacgctcgttgggacgattggagatttttcattaccgcgatggaatgttttgtttggcactctaaatgccataccaaaatcaatctcccttattaccgttactatattacaatgactggaaaacaaagctgcacaagtgtgttctttccccttcaacacatgaatattattctgactgattgttcaactcagtcacctgtgtgtacagataaacaggttgcgaatacttgcactctccagttcaatcaagttatttaggtatctcagtgatatattgtcactacacaatatgagagactctcctactggactgtatttcaatgtttttttagttacaagtgaatcaatatatgagagaatagctcctggtctatcaaattgtatagatcatgcgagaaaacatttaaggtacctgtgaccacgtctggggatgtctctgaatcttgtcgactggctagcctgtatatacagtttgggtccgcacttgaaccaaactctctaaggtgctgatgatgaacaggctgctgaccctgcaggctgttacaacaatcttctttagagaaaatttgaggtacttacgacactcacaagggacggaaaagttgatgaancagcgattantcatttgttcnggtataaagttgacagcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="96577" stop="95241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96277" g_stop="95541" g_length="737"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="737" r_length="737" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U584240" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96277" e_stop="95541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGAAGAACAAGAAGAGATGCACAAAAAAGTCATTGTTATCAATTAGTTCCAAAGAACAAATTGATGTTAACAAAGTGGGCACACGCTCGTTGGGACGATTGGAGATTTTTCATTACCGCGATGGAATGTTTTGTTTGGCACTCTAAATGCCATACCAAAATCAATCTCCCTTATTACCGTTACTATATTACAATGACTGGAAAACAAAGCTGCACAAGTGTGTTCTTTCCCCTTCAACACATGAATATTATTCTGACTGATTGTTCAACTCAGTCACCTGTGTGTACAGATAAACAGGTTGCGAATACTTGCACTCTCCAGTTCAATCAAGTTATTTAGGTATCTCAGTGATATATTGTCACTACACAATATGAGAGACTCTCCTACTGGACTGTATTTCAATGTTTTTTTAGTTACAAGTGAATCAATATATGAGAGAATAGCTCCTGGTCTATCAAATTGTATAGATCATGCGAGAAAACATTTAAGGTACCTGTGACCACGTCTGGGGATGTCTCTGAATCTTGTCGACTGGCTAGCCTGTATATACAGTTTGGGTCCGCACTTGAACCAAACTCTCTAAGGTGCTGATGATGAACAGGCTGCTGACCCTGCAGGCTGTTACAACAATCTTCTTTAGAGAAAATTTGAGGTACTTACGACACTCACAAGGGACGGAAAAGTTGATGAAGCAGCGATTAGTCATTTGTTCAGGTATAAAGTTGACAGCAGAA</genome_strand>
        <mrna_strand>GGCTGAAGAACAAGAAGAGATGCACAAAAAAGTCATTGTTATCAATTAGTTCCAAAGAACAAATTGATGTTAACAAAGTGGGCACACGCTCGTTGGGACGATTGGAGATTTTTCATTACCGCGATGGAATGTTTTGTTTGGCACTCTAAATGCCATACCAAAATCAATCTCCCTTATTACCGTTACTATATTACAATGACTGGAAAACAAAGCTGCACAAGTGTGTTCTTTCCCCTTCAACACATGAATATTATTCTGACTGATTGTTCAACTCAGTCACCTGTGTGTACAGATAAACAGGTTGCGAATACTTGCACTCTCCAGTTCAATCAAGTTATTTAGGTATCTCAGTGATATATTGTCACTACACAATATGAGAGACTCTCCTACTGGACTGTATTTCAATGTTTTTTTAGTTACAAGTGAATCAATATATGAGAGAATAGCTCCTGGTCTATCAAATTGTATAGATCATGCGAGAAAACATTTAAGGTACCTGTGACCACGTCTGGGGATGTCTCTGAATCTTGTCGACTGGCTAGCCTGTATATACAGTTTGGGTCCGCACTTGAACCAAACTCTCTAAGGTGCTGATGATGAACAGGCTGCTGACCCTGCAGGCTGTTACAACAATCTTCTTTAGAGAAAATTTGAGGTACTTACGACACTCACAAGGGACGGAAAAGTTGATGAANCAGCGATTANTCATTTGTTCNGGTATAAAGTTGACAGCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598321" ref_strand="+" ref_description="SGN-U598321 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctctgtcgcctccgtaaagacaacaatttcaagtgtcgcgtctgccactctagttttgctgctggagtggatctggctaaagacaagaagagaaccactaatcggtggaaatacatgaaggatggatgatacacgaaggaggtgaaggaatgaagaagttactttctatttgtttagtctaatgtatcatgttaaatcaagtcttctgctactttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="103155" stop="103973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103455" g_stop="103673" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U598321" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103455" e_stop="103673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGTCGCCTCCGTAAAGACAACAATTTCAAGTGTCGCGTCTGCCACTCTAGTTTTGCTGCTGGAGTGGATCTGGCTAAAGACAAGAAGAGAACCACTAATCGGTGGAAATACATGAAGGATGGATGATACACGAAGGAGGTGAAGGAATGAAGAAGTTACTTTCTATTTGTTTAGTCTAATGTATCATGTTAAATCAAGTCTTCTGCTACTTTCTCT</genome_strand>
        <mrna_strand>CTCTGTCGCCTCCGTAAAGACAACAATTTCAAGTGTCGCGTCTGCCACTCTAGTTTTGCTGCTGGAGTGGATCTGGCTAAAGACAAGAAGAGAACCACTAATCGGTGGAAATACATGAAGGATGGATGATACACGAAGGAGGTGAAGGAATGAAGAAGTTACTTTCTATTTGTTTAGTCTAATGTATCATGTTAAATCAAGTCTTCTGCTACTTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575358" ref_strand="+" ref_description="SGN-U575358 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|147771160|emb|CAN76442.1| (e_value=4e-124) hypothetical; (*ATH) AT3G19000.1 (e_value=1e-106)  Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to SP:P24397 Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine 6-beta- hydroxylase) {Hyoscyamus niger}, SP:Q05965 Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)... ; (*SWP) sp|Q9M547|FLS_EUSGR (e_value=7e-43) Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS; ">
      <seq>gcttaagcaaataattgagcaatggtagaagtccatccagcaatcatccaagatgtcgaacacaggccagatctcaccaaaagtactgaagcagagggcattccagtgattgatctctcaatactgaattctccagacacatcgactgacgcggagttatcaagtctagttggtgaaataagaaatgcatgcaaggagtggggattcttccaagtgatcaatcatggggtgtccttagagtgcagggaaaagatagaattggcatcaagaaagttctttgctttacctaaagaggaaaagatgaaagtgaaaagaaatgaggtgaacttcattggatattatgatgctgagctaaccaaaaagatcagggactggaaagaagtctttgattttactgttgagaagacagctatggtcccactttctcaagatcctaatgacaaggacctcagggactttcagaaccaatggcctcagtaccctccaggattaagggaggtgtgtgcagagtatattcaagaaatgcaaaagttggctaacaagttagcagaactgatatcactcagcttaagcttgccagcaaaaaggctgaatgagttctttgaagaccaaattgtttttggaaggataaatcattatcctccttgtcctgtccctcatctggctttaggagttggtagacacaaagatgctggtttattcaccattttgtgtcaagatgataccggagggcttgaaataaagaggaaaactgatggagaatggataggagttaaacctactcctgatgcatacattgtaaatcttggtgacgctacacaggtgtatagcaatgatgaatatgagagtgtggaacatcgcgttgtgctgaacactgaaaggagtagatattcaattcctttctttgtcaatccatcgcatagtacttggatacaacccttggaggagaaggtcaatgagaagaaccctgcaaagtataagccctataactggggaatgcttttcactcatcgcagaaaacacgatcccaagacgcgtgatgaggaaaaccttacacttgatcatttcatggcttgaaacaaatcaattttatgtttatgtcttcttcaagtaaatgtgtcatgtaatataaataataacatctttattagtgtctatgtctacttaatttcctatatgtgtaatcccagcaaaatgtgtcaatgtaatcgttttcatcccatcttatattataatgcttaatgtgatcttatctttggcttaacattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="110055" stop="112172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110354" g_stop="110847" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110848" i_stop="111023" i_length="176">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111024" g_stop="111351" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="822" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111352" i_stop="111424" i_length="73">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111425" g_stop="111869" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="823" r_stop="1267" r_length="445" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U575358" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1267</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110354" e_stop="110847"/>
          <exon e_start="111024" e_stop="111351"/>
          <exon e_start="111425" e_stop="111869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTAAGCAAATAATTGAGCAATGGTAGAAGTCCATCCAGCAATCATCCAAGATGTCGAACACAGGCCAGATCTCACCAAAAGTACTGAAGCAGAGGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATAAGAAATGCATGCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGAAAGTTCTTTGCTTTACCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAAAAGATCAGGGACTGGAAAGAAGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTCAAGATCCTAATGACAAGGACCTCAGGGACTTTCAGAACCAATGGCCTCAGTACCCTCCAGGATTAAGGTAATTAATACTATTCTACCATCAAAAAAATATCTTAGGGAAGAAAATTTATTCCTGAATATGAAAAACACCAAAAAGCTGTTTTTACTCCAAAATGATTTTTTAAATGTCAAGGGTATAATTGATCCCAAAGTACAACGGAATATTTCGCGATTTACTTATGATTGGATTTTCAGGGAGGTGTGTGCAGAGTATATTCAAGAAATGCAAAAGTTGGCTAACAAGTTAGCAGAACTGATATCACTCAGCTTAAGCTTGCCAGCAAAAAGGCTGAATGAGTTCTTTGAAGACCAAATTGTTTTTGGAAGGATAAATCATTATCCTCCTTGTCCTGTCCCTCATCTGGCTTTAGGAGTTGGTAGACACAAAGATGCTGGTTTATTCACCATTTTGTGTCAAGATGATACCGGAGGGCTTGAAATAAAGAGGAAAACTGATGGAGAATGGATAGGAGTTAAACCTACTCCTGATGCATACATTGTAAATCTTGGTGACGCTACACAGGTACGTCTTATCAAAGAAAATAATGTATTGTTGATTTATATATATATATATTATATAAATGATCGATCACCAGGTGTATAGCAATGATGAATATGAGAGTGTGGAACATCGCGTTGTGCTGAACACTGAAAGGAGTAGATATTCAATTCCTTTCTTTGTCAATCCATCGCATAGTACTTGGATACAACCCTTGGAGGAGAAGGTCAATGAGAAGAACCCTGCAAAGTATAAGCCCTATAACTGGGGAATGCTTTTCACTCATCGCAGAAAACACGATCCCAAGACGCGTGATGAGGAAAACCTTACACTTGATCATTTCATGGCTTGAAACAAATCAATTTTATGTTTATGTCTTCTTCAAGTAAATGTGTCATGTAATATAAATAATAACATCTTTATTAGTGTCTATGTCTACTTAATTTCCTATATGTGTAATCCCAGCAAAATGTGTCAATGTAATCGTTTTCATCCCATCTTATATTATAATGCTTAATGTGATCTTATCTTTGGCTTAACAT</genome_strand>
        <mrna_strand>GCTTAAGCAAATAATTGAGCAATGGTAGAAGTCCATCCAGCAATCATCCAAGATGTCGAACACAGGCCAGATCTCACCAAAAGTACTGAAGCAGAGGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATAAGAAATGCATGCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGAAAGTTCTTTGCTTTACCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAAAAGATCAGGGACTGGAAAGAAGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTCAAGATCCTAATGACAAGGACCTCAGGGACTTTCAGAACCAATGGCCTCAGTACCCTCCAGGATTAAG................................................................................................................................................................................GGAGGTGTGTGCAGAGTATATTCAAGAAATGCAAAAGTTGGCTAACAAGTTAGCAGAACTGATATCACTCAGCTTAAGCTTGCCAGCAAAAAGGCTGAATGAGTTCTTTGAAGACCAAATTGTTTTTGGAAGGATAAATCATTATCCTCCTTGTCCTGTCCCTCATCTGGCTTTAGGAGTTGGTAGACACAAAGATGCTGGTTTATTCACCATTTTGTGTCAAGATGATACCGGAGGGCTTGAAATAAAGAGGAAAACTGATGGAGAATGGATAGGAGTTAAACCTACTCCTGATGCATACATTGTAAATCTTGGTGACGCTACACAG.........................................................................GTGTATAGCAATGATGAATATGAGAGTGTGGAACATCGCGTTGTGCTGAACACTGAAAGGAGTAGATATTCAATTCCTTTCTTTGTCAATCCATCGCATAGTACTTGGATACAACCCTTGGAGGAGAAGGTCAATGAGAAGAACCCTGCAAAGTATAAGCCCTATAACTGGGGAATGCTTTTCACTCATCGCAGAAAACACGATCCCAAGACGCGTGATGAGGAAAACCTTACACTTGATCATTTCATGGCTTGAAACAAATCAATTTTATGTTTATGTCTTCTTCAAGTAAATGTGTCATGTAATATAAATAATAACATCTTTATTAGTGTCTATGTCTACTTAATTTCCTATATGTGTAATCCCAGCAAAATGTGTCAATGTAATCGTTTTCATCCCATCTTATATTATAATGCTTAATGTGATCTTATCTTTGGCTTAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585292" ref_strand="+" ref_description="SGN-U585292 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|7672732|gb|AAF66615.1| (e_value=8e-172) LRR receptor-like protein kinase [Nicotiana tabacum]; (*ATH) AT1G66150.1 (e_value=3e-129)  Symbol: None | leucine-rich repeat protein kinase, putative (TMK1), identical to protein kinase TMK1 gi:166888:gb:AAA32876, SP:P43298 Putative receptor protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis thaliana} | chr1:24635072-24638412 FORWAR... ; (*SWP) sp|P43298|TMK1_ARATH (e_value=3e-128) Putative receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1; ">
      <seq>ggttgaacacaatgaatttgaacacatttgtgtgtttctttttactcttttcgaatgttgtgtctgtttactctcagggcagtgctgctacagatgctgcagtgatgcaagaattcaagaaacaaataataaatcctaatccacttaactggaacgatccagatccgtgtaaatgggataaagttcaatgtagtaaggatggtcgcgtaattaggattcaagtaggggatcaaggcctaaaaggaactctcccatcaaacattaatacccttactgaattgcaagtttttgaagttcaaagaaatacattcactggtccgctcccgagtttttctggattaaactcattgcagaccattcttcttaatggcaatgggttcacttcaattcctaatgaattttttcaaggtatgactaatttgcaaagtgtttacttggattcaaatcccttttcatcatggactgtaccagaaagcctgaaaagtgcgactgctcttcaaatattctccgcttattctgctaatattactggtaaaatccctgatttatttggtggaaatacattctctagtttaacaactttgcatttgtcctttaataatttggagggtcctctgccctcgagcttttcgggttcttctatccaatcgttgtggttaaatagtattagaggtaagttaaatggctcaatagatgtgatacagaacatgaccagattaacccaactctggttttcaggcaatcagtttacaggccctttgcctgatttttcggggttaactcagctggaagattgtaatttgagagataatagcttcactggtctagtcccagactctttggtcaatcttccttcattaaaagtggttaatttgacaaacaacattttgcaagggcctacgccacaatttccatcttcagtgcgagtggatatgttggataataccaatagtttttgtttgtcacaacctggtccttgtgactcgcgggttagtacactgttggatgtgcttaaggacgtaaggtatcccacgaagtttgctgagaattggaaagggaatgatccgtgttcgcgttggcttggcataacttgcgatggtgaaaacattacagtactcaattttcagaaaagtggacttactgggatcatctcttcaaacttgtcgtctattacgtcaatacagaggctgatcctagcagacaattctcttacagggactatcccaaatgagctcacattgctgccaaaattaacggaattggatgtttctaacaatcaactgtatggaaaaatcccacaatttaagagcagtgtagtggttaaaactgaaggcaacgtcaatattgggaaagataagccacctacatctgcaccttgaacgcgttctgataaatgtattagcaaatgtaataatctataagaagatttgtactatatattaagctatttagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="112219" stop="114271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112518" g_stop="113971" g_length="1454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1454" r_length="1454" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U585292" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112518" e_stop="113971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGAACACAATGAATTTGAACACATTTGTGTGTTTCTTTTTACTCTTTTCGAATGTTGTGTCTGTTTACTCTCAGGGCAGTGCTGCTACAGATGCTGCAGTGATGCAAGAATTCAAGAAACAAATAATAAATCCTAATCCACTTAACTGGAACGATCCAGATCCGTGTAAATGGGATAAAGTTCAATGTAGTAAGGATGGTCGCGTAATTAGGATTCAAGTAGGGGATCAAGGCCTAAAAGGAACTCTCCCATCAAACATTAATACCCTTACTGAATTGCAAGTTTTTGAAGTTCAAAGAAATACATTCACTGGTCCGCTCCCGAGTTTTTCTGGATTAAACTCATTGCAGACCATTCTTCTTAATGGCAATGGGTTCACTTCAATTCCTAATGAATTTTTTCAAGGTATGACTAATTTGCAAAGTGTTTACTTGGATTCAAATCCCTTTTCATCATGGACTGTACCAGAAAGCCTGAAAAGTGCGACTGCTCTTCAAATATTCTCCGCTTATTCTGCTAATATTACTGGTAAAATCCCTGATTTATTTGGTGGAAATACATTCTCTAGTTTAACAACTTTGCATTTGTCCTTTAATAATTTGGAGGGTCCTCTGCCCTCGAGCTTTTCGGGTTCTTCTATCCAATCGTTGTGGTTAAATAGTATTAGAGGTAAGTTAAATGGCTCAATAGATGTGATACAGAACATGACCAGATTAACCCAACTCTGGTTTTCAGGCAATCAGTTTACAGGCCCTTTGCCTGATTTTTCGGGGTTAACTCAGCTGGAAGATTGTAATTTGAGAGATAATAGCTTCACTGGTCTAGTCCCAGACTCTTTGGTCAATCTTCCTTCATTAAAAGTGGTTAATTTGACAAACAACATTTTGCAAGGGCCTACGCCACAATTTCCATCTTCAGTGCGAGTGGATATGTTGGATAATACCAATAGTTTTTGTTTGTCACAACCTGGTCCTTGTGACTCGCGGGTTAGTACACTGTTGGATGTGCTTAAGGACGTAAGGTATCCCACGAAGTTTGCTGAGAATTGGAAAGGGAATGATCCGTGTTCGCGTTGGCTTGGCATAACTTGCGATGGTGAAAACATTACAGTACTCAATTTTCAGAAAAGTGGACTTACTGGGATCATCTCTTCAAACTTGTCGTCTATTACGTCAATACAGAGGCTGATCCTAGCAGACAATTCTCTTACAGGGACTATCCCAAATGAGCTCACATTGCTGCCAAAATTAACGGAATTGGATGTTTCTAACAATCAACTGTATGGAAAAATCCCACAATTTAAGAGCAGTGTAGTGGTTAAAACTGAAGGCAACGTCAATATTGGGAAAGATAAGCCACCTACATCTGCACCTTGAACGCGTTCTGATAAATGTATTAGCAAATGTAATAATCTATAAGAAGATTTGTACTATATATTAAGCTATTTAGAT</genome_strand>
        <mrna_strand>GGTTGAACACAATGAATTTGAACACATTTGTGTGTTTCTTTTTACTCTTTTCGAATGTTGTGTCTGTTTACTCTCAGGGCAGTGCTGCTACAGATGCTGCAGTGATGCAAGAATTCAAGAAACAAATAATAAATCCTAATCCACTTAACTGGAACGATCCAGATCCGTGTAAATGGGATAAAGTTCAATGTAGTAAGGATGGTCGCGTAATTAGGATTCAAGTAGGGGATCAAGGCCTAAAAGGAACTCTCCCATCAAACATTAATACCCTTACTGAATTGCAAGTTTTTGAAGTTCAAAGAAATACATTCACTGGTCCGCTCCCGAGTTTTTCTGGATTAAACTCATTGCAGACCATTCTTCTTAATGGCAATGGGTTCACTTCAATTCCTAATGAATTTTTTCAAGGTATGACTAATTTGCAAAGTGTTTACTTGGATTCAAATCCCTTTTCATCATGGACTGTACCAGAAAGCCTGAAAAGTGCGACTGCTCTTCAAATATTCTCCGCTTATTCTGCTAATATTACTGGTAAAATCCCTGATTTATTTGGTGGAAATACATTCTCTAGTTTAACAACTTTGCATTTGTCCTTTAATAATTTGGAGGGTCCTCTGCCCTCGAGCTTTTCGGGTTCTTCTATCCAATCGTTGTGGTTAAATAGTATTAGAGGTAAGTTAAATGGCTCAATAGATGTGATACAGAACATGACCAGATTAACCCAACTCTGGTTTTCAGGCAATCAGTTTACAGGCCCTTTGCCTGATTTTTCGGGGTTAACTCAGCTGGAAGATTGTAATTTGAGAGATAATAGCTTCACTGGTCTAGTCCCAGACTCTTTGGTCAATCTTCCTTCATTAAAAGTGGTTAATTTGACAAACAACATTTTGCAAGGGCCTACGCCACAATTTCCATCTTCAGTGCGAGTGGATATGTTGGATAATACCAATAGTTTTTGTTTGTCACAACCTGGTCCTTGTGACTCGCGGGTTAGTACACTGTTGGATGTGCTTAAGGACGTAAGGTATCCCACGAAGTTTGCTGAGAATTGGAAAGGGAATGATCCGTGTTCGCGTTGGCTTGGCATAACTTGCGATGGTGAAAACATTACAGTACTCAATTTTCAGAAAAGTGGACTTACTGGGATCATCTCTTCAAACTTGTCGTCTATTACGTCAATACAGAGGCTGATCCTAGCAGACAATTCTCTTACAGGGACTATCCCAAATGAGCTCACATTGCTGCCAAAATTAACGGAATTGGATGTTTCTAACAATCAACTGTATGGAAAAATCCCACAATTTAAGAGCAGTGTAGTGGTTAAAACTGAAGGCAACGTCAATATTGGGAAAGATAAGCCACCTACATCTGCACCTTGAACGCGTTCTGATAAATGTATTAGCAAATGTAATAATCTATAAGAAGATTTGTACTATATATTAAGCTATTTAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U601231" ref_strand="+" ref_description="SGN-U601231 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|7672732|gb|AAF66615.1| (e_value=1e-79) LRR receptor-like protein kinase [Nicotiana tabacum]; (*ATH) AT1G66150.1 (e_value=3e-49)  Symbol: None | leucine-rich repeat protein kinase, putative (TMK1), identical to protein kinase TMK1 gi:166888:gb:AAA32876, SP:P43298 Putative receptor protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis thaliana} | chr1:24635072-24638412 FORWAR... ; (*SWP) sp|P43298|TMK1_ARATH (e_value=3e-48) Putative receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1; ">
      <seq>ggtcgttacaaaagttgatcctagcaaataattttcttactggaactattccgaatgagctcgtttcgctgccaaacctaaaggaatttgatatttctaacaatctaatttatgggaaaatcccaccatttaagagcaatgtattggttaaatatgatggcaatgtcaatattgggaaagataatccacctccttttgcaccttccgggagcactcctagttcacccgatggaggtggacaaactcatgggaatggtaataaaaaatcttcaactggagttgttgtgggctcagtgataggtggtgtttgtggtgccgttgcgattgctggattatttgtgttttgtctttacaggactaagcgtatgcggtccggtagagttcagagtccacacacagttgttattcatcctcatcattcaggatctgaccaagatgctgttaagatcacagttgctggttcaagtgtcaatggagggacaactgaaacgcacagttgtggaagcagtgcacctggggacttgcacattgttgaggctggtaacatggtgatttccatccaagttttgaggaatgtcacgaacaacttcagcgaggagaatatattggggagaggtggatttggaactgtttacaaaggggagttgcatgatggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="121886" stop="123142"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122185" g_stop="122842" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U601231" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122185" e_stop="122842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCGTTACAAAAGTTGATCCTAGCAAATAATTTTCTTACTGGAACTATTCCGAATGAGCTCGTTTCGCTGCCAAACCTAAAGGAATTTGATATTTCTAACAATCTAATTTATGGGAAAATCCCACCATTTAAGAGCAATGTATTGGTTAAATATGATGGCAATGTCAATATTGGGAAAGATAATCCACCTCCTTTTGCACCTTCCGGGAGCACTCCTAGTTCACCCGATGGAGGTGGACAAACTCATGGGAATGGTAATAAAAAATCTTCAACTGGAGTTGTTGTGGGCTCAGTGATAGGTGGTGTTTGTGGTGCCGTTGCGATTGCTGGATTATTTGTGTTTTGTCTTTACAGGACTAAGCGTATGCGGTCCGGTAGAGTTCAGAGTCCACACACAGTTGTTATTCATCCTCATCATTCAGGATCTGACCAAGATGCTGTTAAGATCACAGTTGCTGGTTCAAGTGTCAATGGAGGGACAACTGAAACGCACAGTTGTGGAAGCAGTGCACCTGGGGACTTGCACATTGTTGAGGCTGGTAACATGGTGATTTCCATCCAAGTTTTGAGGAATGTCACGAACAACTTCAGCGAGGAGAATATATTGGGGAGAGGTGGATTTGGAACTGTTTACAAGGGGGAGTTGCATGATGGAAC</genome_strand>
        <mrna_strand>GGTCGTTACAAAAGTTGATCCTAGCAAATAATTTTCTTACTGGAACTATTCCGAATGAGCTCGTTTCGCTGCCAAACCTAAAGGAATTTGATATTTCTAACAATCTAATTTATGGGAAAATCCCACCATTTAAGAGCAATGTATTGGTTAAATATGATGGCAATGTCAATATTGGGAAAGATAATCCACCTCCTTTTGCACCTTCCGGGAGCACTCCTAGTTCACCCGATGGAGGTGGACAAACTCATGGGAATGGTAATAAAAAATCTTCAACTGGAGTTGTTGTGGGCTCAGTGATAGGTGGTGTTTGTGGTGCCGTTGCGATTGCTGGATTATTTGTGTTTTGTCTTTACAGGACTAAGCGTATGCGGTCCGGTAGAGTTCAGAGTCCACACACAGTTGTTATTCATCCTCATCATTCAGGATCTGACCAAGATGCTGTTAAGATCACAGTTGCTGGTTCAAGTGTCAATGGAGGGACAACTGAAACGCACAGTTGTGGAAGCAGTGCACCTGGGGACTTGCACATTGTTGAGGCTGGTAACATGGTGATTTCCATCCAAGTTTTGAGGAATGTCACGAACAACTTCAGCGAGGAGAATATATTGGGGAGAGGTGGATTTGGAACTGTTTACAAAGGGGAGTTGCATGATGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588263" ref_strand="+" ref_description="SGN-U588263 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|7672732|gb|AAF66615.1| (e_value=1e-64) LRR receptor-like protein kinase [Nicotiana tabacum]; (*ATH) AT1G66150.1 (e_value=6e-61)  Symbol: None | leucine-rich repeat protein kinase, putative (TMK1), identical to protein kinase TMK1 gi:166888:gb:AAA32876, SP:P43298 Putative receptor protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis thaliana} | chr1:24635072-24638412 FORWAR... ; (*SWP) sp|P43298|TMK1_ARATH (e_value=5e-60) Putative receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1; ">
      <seq>ggcccctcgaatggacaaggaggctaatcattgcacttgatgttgcaaggggtgttgaatatcttcatggtttagctcaacagagcttcattcatagagatctgaagccatctaacattcttttgggagatgatatgagggctaaagttgcagattttggacttgttcgccttgctcctgagggaaaaacttcattggttactaggttggctggaacttttggctatcttgcaccagagtatgcagttacgggccgagtaaccacaaagattgatgtgtttagctttggtgtaatcttgatggagctaattactggaagaagagctctggatgaatctcagcccgaggagagcatgcatctggtcccatggttccgcagaatgcatataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="+" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="122762" stop="124692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123061" g_stop="123306" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123307" i_stop="124248" i_length="942">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124249" g_stop="124392" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="390" r_length="144" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="+" ref_id="SGN-U588263" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123061" e_stop="123306"/>
          <exon e_start="124249" e_stop="124392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCCCTCGAATGGACAAGGAGGCTAATCATTGCACTTGATGTTGCAAGGGGTGTTGAATATCTTCATGGTTTAGCTCAACAGAGCTTCATTCATAGAGATCTGAAGCCATCTAACATTCTTTTGGGAGATGATATGAGGGCTAAAGTTGCAGATTTTGGACTTGTTCGCCTTGCTCCTGAGGGAAAAACTTCATTGGTTACTAGGTTGGCTGGAACTTTTGGCTATCTTGCACCAGAGTATGCAGGTAAACTTCATCATATGACCTGTTAATTTTAGTTATATTTTTGCATATATTTGATTGCATTAATGGACTTATGTTAGTGTATTTAAGGCCAATAATATTAGATTAATAGGCTTAACAGGAGACGGTGGAAGTAGGAACTGCTTCCTCTCTTGTTTTGGTCTGCATCTACAGACCATCAGGGAAGCCTATTTTAGCCGGATCTTTGATGTTTTGAATGGGTCTCAACTTGAAATCACTCTCTAAAATCCAATACGTAGTTATTTGTTTAGCTGGATTTTGTCCTTTAAATATTGTTGACACTTTTTTTGGATTTTGTAAGCTCTTTGATTTTAGCTAGGTTCTTGTACTGGAGCTAACTCTCTTGTACACTTTTGCTAATATCATCTCCCTGATACAGTGGAAGTAAAACCAACAGAGAGTTGGGAACATTACCTTTATCAAAAATATGAATCAATTCCTATAGAGAGAGAAGTTTCTATGGTGAGAACCTGAAAATAAGCAATATGCCTCTAATCAAGGCAAATTCAAATACTTCTTAGAAATGCTTGACAGTCAAAACCTAAATCTACTTCTTCAATAAGATGTAGGAATTCCTGGTAACCTTTCTCTTATCTCCACAAGTTAGTTATGTTACCGCCATTTAGGTGTTGTGCTCTTGTGTTGAATGATGATTTTTTCCATATTACGGAAAAACACTTGCCTTTCTGATTGTATATTTTCTTCCTTGATGATAAAGCTGTGTTGCTATTGTTCATTTCCTTTAGGCTCAGATCAAGTGCAGTTTATCTCCTTTTGGCATTGATCGGGTTCTTTCATTTGGTTTCTTGTTTACATTTTATTCTCCCTATCCAACTAAAATTCAATTAAATAGCTCTCATCTTGAATTGCATCATTAGTATGAAAGAAACTGTTAATACTTGACTATCTTGTTTCATTGGGCAGTTACGGGCCGAGTAACCACAAAGATTGATGTGTTTAGCTTTGGTGTAATCTTGATGGAGCTAATTACTGGAAGAAGAGCTCTGGATGAATCTCAGCCCGAGGAGAGCATGCATCTGGTCCCATGGTTCCGCAGAATGCATATAA</genome_strand>
        <mrna_strand>GGCCCCTCGAATGGACAAGGAGGCTAATCATTGCACTTGATGTTGCAAGGGGTGTTGAATATCTTCATGGTTTAGCTCAACAGAGCTTCATTCATAGAGATCTGAAGCCATCTAACATTCTTTTGGGAGATGATATGAGGGCTAAAGTTGCAGATTTTGGACTTGTTCGCCTTGCTCCTGAGGGAAAAACTTCATTGGTTACTAGGTTGGCTGGAACTTTTGGCTATCTTGCACCAGAGTATGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGGCCGAGTAACCACAAAGATTGATGTGTTTAGCTTTGGTGTAATCTTGATGGAGCTAATTACTGGAAGAAGAGCTCTGGATGAATCTCAGCCCGAGGAGAGCATGCATCTGGTCCCATGGTTCCGCAGAATGCATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U564287" ref_strand="+" ref_description="SGN-U564287 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|7672732|gb|AAF66615.1| (e_value=3e-56) LRR receptor-like protein kinase [Nicotiana tabacum]; (*ATH) AT1G66150.1 (e_value=3e-45)  Symbol: None | leucine-rich repeat protein kinase, putative (TMK1), identical to protein kinase TMK1 gi:166888:gb:AAA32876, SP:P43298 Putative receptor protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis thaliana} | chr1:24635072-24638412 FORWAR... ; (*SWP) sp|P43298|TMK1_ARATH (e_value=2e-44) Putative receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1; ">
      <seq>ttcatattgtcactaaaaatcttttaacaaaacctggaagaaaccgagacggggagaaaaagaaggcaaagatggatgagcacaaggaatgaacaaaccaaccctttaaagggcaatacaccaccagtatagtcggacaatcaaattatcgtccatccactgacgcaaacgaatcggcgaatccagatggccgagagggaatacttgttagagtatcatcactgcttccaatatatgaagaagagccgtcaatgccactcattccatcgagagcctgccacttctaaactgcttgaggtagcgtcatgtcataatcgataccatatatttcatcctcgtccacttctgctggcttccagagctcagccagggaggaaagcacgttgacagcatgacccatgtctggtctctgatggggttccctagcacagcagtgaccagccaactcaacaactttgctgacactggccagagtatcttcatcaagatcgattgtgtggtcaatggccttacggaatgtctccttatttatatgcattctgcggaaccatgggaccagatgcatgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="125220" stop="124051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124920" g_stop="124351" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U564287" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124920" e_stop="124351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATATTGTCACTAAAAATCTTTTAACAAAACCTGTAAGAAACCGAGACGGGGAGAAAAAGAAGGCAAAGATGGATGAGCACAAGGAATGAACAAACCAACCCTTTAAAGGGCAATACACCACCAGTATAGTTGGACAATCAAATTATCGTCCATCCACTGACGTAAATGAATCGGCGAATCCAGATGGCCGAGTGGGTATACTTGTTTGTGTATTTTCACTGCTTCCAATATATGAAGAAGAGCCGTCAATGCCACTCATTCCCTCGAGAGCCTGCCACTTCTTAACTGCTTGAGGTAGCGTCATGTCATAATCGATACCATATATTTCATCCTCGTCCACTTCTGCTGGCTTCCAGAGCTCAGCCAGGGAGGAAAGCACGTTGACAGCATGACCCATGTCTGGTCTCTGATGGGGTTCCCTAGCACAGCAGTGACCAGCCAACTCAGCAACTTTGCTGACACTGGCCAGAGTATCTTCATCAAGATCGATTGTGTGGTCAATGGCCTTACGGAATGTCTCCTTATTTATATGCATTCTGCGGAACCATGGGACCAGATGCATGCTCT</genome_strand>
        <mrna_strand>TTCATATTGTCACTAAAAATCTTTTAACAAAACCTGGAAGAAACCGAGACGGGGAGAAAAAGAAGGCAAAGATGGATGAGCACAAGGAATGAACAAACCAACCCTTTAAAGGGCAATACACCACCAGTATAGTCGGACAATCAAATTATCGTCCATCCACTGACGCAAACGAATCGGCGAATCCAGATGGCCGAGAGGGAATACTTGTTAGAGTATCATCACTGCTTCCAATATATGAAGAAGAGCCGTCAATGCCACTCATTCCATCGAGAGCCTGCCACTTCTAAACTGCTTGAGGTAGCGTCATGTCATAATCGATACCATATATTTCATCCTCGTCCACTTCTGCTGGCTTCCAGAGCTCAGCCAGGGAGGAAAGCACGTTGACAGCATGACCCATGTCTGGTCTCTGATGGGGTTCCCTAGCACAGCAGTGACCAGCCAACTCAACAACTTTGCTGACACTGGCCAGAGTATCTTCATCAAGATCGATTGTGTGGTCAATGGCCTTACGGAATGTCTCCTTATTTATATGCATTCTGCGGAACCATGGGACCAGATGCATGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U591120" ref_strand="+" ref_description="SGN-U591120 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C01HBa0008L19-7AtJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C01HBa0008L19.1" temp_strand="-" temp_description="C01HBa0008L19.1  AC238499.2 htgs_phase:3 submitted_to_sgn_as:AC238499 Solanum lycopersicum strain Heinz 1706 clone hba-8l19, complete sequence.">
        <position start="131197" stop="130201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130955" g_stop="130536" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C01HBa0008L19.1" gen_strand="-" ref_id="SGN-U591120" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C01HBa0008L19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130955" e_stop="130536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTGTAGATAACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACAGTAAAAAAAATAGTTTAATTTTTTTACTTTAAACTAAGGAATGAAAG-AAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAATATTAAAATATACGTTGAACTTTGATAGAAGAATCATATATATCCCTAAATA---ATTTTAAAAAAAAATTAGAAGTAATAAATATAAATTTAAAATTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGTCATTTTATAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGTAAGGGCATATATGAGCCACTTTTATAACGAGGGATGTATAAGCTCTAAATGACAAAGTTGAGGG</genome_strand>
        <mrna_strand>CTTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACA-CAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAA-ATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>26</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5624" PGL_stop="5087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5624" e_stop="5087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5624" e_stop="5087" e_length="538"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5624" stop="5087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564288" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGCCAAAAACCCTAATCTCCAAGAAAAGGAAGAAATAAATCACCAAGGATGTCTTACGACGACGTGGAGATTGAGGATATGGAGTGGAACGATGAGCTCCAATCTTATACTTATCCTTGTCCGTGCGGTGACTTGTTTCAAATCACGAAGGAAGAACTGAAGATTGGGGAAGAGATCGCTCGATGCCCTAGTTGTTCCCTTTATATCACCGTTATTTATAATCTCGAAGATTTCCTCGGAGATTCCAAGAAACCCGTCGAGCCCTCGAAACAACAGCCAGTTGCTGTCGCTTGAGGTTCACGCTGAGTGCTTCTTTTTTTTCTTTCATGAATTTGGTATCATATTGTAATACCTAGTGATTTGAAGTGGCATTAACTGCCTGAAATTTTGCAATTTTGGAAAAGAAAGGAATTTATGGTTTTGTTTAAAGTGTGTCCTCTGAATACTATTGGAATTGCGATAAATTATTGTATGATATATTCCTAGCAAACAATTATGTTGAACTTTGACATATTATTATGGAGCTGTTTATCTGGT</gDNA_template>
            <first_frame> E  P  K  T  L  I  S  K  K  R  K  K  *  I  T  K  D  V  L  R  R  R  G  D  *  G  Y  G  V  E  R  *  A  P  I  L  Y  L  S  L  S  V  R  *  L  V  S  N  H  E  G  R  T  E  D  W  G  R  D  R  S  M  P  *  L  F  P  L  Y  H  R  Y  L  *  S  R  R  F  P  R  R  F  Q  E  T  R  R  A  L  E  T  T  A  S  C  C  R  L  R  F  T  L  S  A  S  F  F  S  F  M  N  L  V  S  Y  C  N  T  *  *  F  E  V  A  L  T  A  *  N  F  A  I  L  E  K  K  G  I  Y  G  F  V  *  S  V  S  S  E  Y  Y  W  N  C  D  K  L  L  Y  D  I  F  L  A  N  N  Y  V  E  L  *  H  I  I  M  E  L  F  I  W  </first_frame>
            <second_frame>  S  Q  K  P  *  S  P  R  K  G  R  N  K  S  P  R  M  S  Y  D  D  V  E  I  E  D  M  E  W  N  D  E  L  Q  S  Y  T  Y  P  C  P  C  G  D  L  F  Q  I  T  K  E  E  L  K  I  G  E  E  I  A  R  C  P  S  C  S  L  Y  I  T  V  I  Y  N  L  E  D  F  L  G  D  S  K  K  P  V  E  P  S  K  Q  Q  P  V  A  V  A  *  G  S  R  *  V  L  L  F  F  L  S  *  I  W  Y  H  I  V  I  P  S  D  L  K  W  H  *  L  P  E  I  L  Q  F  W  K  R  K  E  F  M  V  L  F  K  V  C  P  L  N  T  I  G  I  A  I  N  Y  C  M  I  Y  S  *  Q  T  I  M  L  N  F  D  I  L  L  W  S  C  L  S  G </second_frame>
            <third_frame>   A  K  N  P  N  L  Q  E  K  E  E  I  N  H  Q  G  C  L  T  T  T  W  R  L  R  I  W  S  G  T  M  S  S  N  L  I  L  I  L  V  R  A  V  T  C  F  K  S  R  R  K  N  *  R  L  G  K  R  S  L  D  A  L  V  V  P  F  I  S  P  L  F  I  I  S  K  I  S  S  E  I  P  R  N  P  S  S  P  R  N  N  S  Q  L  L  S  L  E  V  H  A  E  C  F  F  F  F  F  H  E  F  G  I  I  L  *  Y  L  V  I  *  S  G  I  N  C  L  K  F  C  N  F  G  K  E  R  N  L  W  F  C  L  K  C  V  L  *  I  L  L  E  L  R  *  I  I  V  *  Y  I  P  S  K  Q  L  C  *  T  L  T  Y  Y  Y  G  A  V  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5608" stop="5330"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPRKGRNKSPRMSYDDVEIEDMEWNDELQSYTYPCPCGDLFQITKEELKIGEEIARCPSCSLYITVIYNLEDFLGDSKKPVEPSKQQPVAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="6207" PGL_stop="6878"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6207" e_stop="6878"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="6207" e_stop="6878" e_length="672"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6207" stop="6878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600588" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCTGCGAGAATCAGTTACTTCTTCTCAGTGGCATTTTATCAAACATGTTACGGGAGAACTAAACCCCACCTTGATTTCAGCTACTCTTCCAGAGCTTCGTTCATCTCCTGACCGAGTACTCACTTTCATCGAAAATCTCGGTCCTGATTGCTTAGACATATCCTGTTATTGTCTTGCCATTTCCATACTCTCTCGTCTCCCCTCGCCTAAACAAGCCACTCACCTTCTCAAGCAAGTGATCAGTTCTCGCTTTGCTTCGCCTAATGAGATTTTTTATGGGCTTGTGAGTGCTCGGGAGAAGCTGGTGGTGAAGAGTTCAATTGTGTTGGATTTGCTTGTAAGGGCGTATTGTGAATTGAAGAAGGGGGAGGATGCATTAAAGTGCTTTTATTTGATGAAACAGAAGGGAATTTTGCCAAAGGTAGAGACTTGTAATGATTTGTTGAGTCTTTTTCTTAAATTGAATAGGACCCATTTGGCTTGGATTGTGTATGCCGAGATGTTTAGGATGAAAATGAGTTCTACTGTATGTACGTTTAATATAATGATCAATGTTTTGTGTAGAGAAGGAAAGTTGAAGAAGGCAAAAGAGTTCATTGAACACATGCAGTGTTCAGGGGTTAAGCCGAATTTAATATCTTTTAATACTGTGATTCATGGTTATTGTCTG</gDNA_template>
            <first_frame> V  L  R  E  S  V  T  S  S  Q  W  H  F  I  K  H  V  T  G  E  L  N  P  T  L  I  S  A  T  L  P  E  L  R  S  S  P  D  R  V  L  T  F  I  E  N  L  G  P  D  C  L  D  I  S  C  Y  C  L  A  I  S  I  L  S  R  L  P  S  P  K  Q  A  T  H  L  L  K  Q  V  I  S  S  R  F  A  S  P  N  E  I  F  Y  G  L  V  S  A  R  E  K  L  V  V  K  S  S  I  V  L  D  L  L  V  R  A  Y  C  E  L  K  K  G  E  D  A  L  K  C  F  Y  L  M  K  Q  K  G  I  L  P  K  V  E  T  C  N  D  L  L  S  L  F  L  K  L  N  R  T  H  L  A  W  I  V  Y  A  E  M  F  R  M  K  M  S  S  T  V  C  T  F  N  I  M  I  N  V  L  C  R  E  G  K  L  K  K  A  K  E  F  I  E  H  M  Q  C  S  G  V  K  P  N  L  I  S  F  N  T  V  I  H  G  Y  C  L </first_frame>
            <second_frame>  F  C  E  N  Q  L  L  L  L  S  G  I  L  S  N  M  L  R  E  N  *  T  P  P  *  F  Q  L  L  F  Q  S  F  V  H  L  L  T  E  Y  S  L  S  S  K  I  S  V  L  I  A  *  T  Y  P  V  I  V  L  P  F  P  Y  S  L  V  S  P  R  L  N  K  P  L  T  F  S  S  K  *  S  V  L  A  L  L  R  L  M  R  F  F  M  G  L  *  V  L  G  R  S  W  W  *  R  V  Q  L  C  W  I  C  L  *  G  R  I  V  N  *  R  R  G  R  M  H  *  S  A  F  I  *  *  N  R  R  E  F  C  Q  R  *  R  L  V  M  I  C  *  V  F  F  L  N  *  I  G  P  I  W  L  G  L  C  M  P  R  C  L  G  *  K  *  V  L  L  Y  V  R  L  I  *  *  S  M  F  C  V  E  K  E  S  *  R  R  Q  K  S  S  L  N  T  C  S  V  Q  G  L  S  R  I  *  Y  L  L  I  L  *  F  M  V  I  V   </second_frame>
            <third_frame>   S  A  R  I  S  Y  F  F  S  V  A  F  Y  Q  T  C  Y  G  R  T  K  P  H  L  D  F  S  Y  S  S  R  A  S  F  I  S  *  P  S  T  H  F  H  R  K  S  R  S  *  L  L  R  H  I  L  L  L  S  C  H  F  H  T  L  S  S  P  L  A  *  T  S  H  S  P  S  Q  A  S  D  Q  F  S  L  C  F  A  *  *  D  F  L  W  A  C  E  C  S  G  E  A  G  G  E  E  F  N  C  V  G  F  A  C  K  G  V  L  *  I  E  E  G  G  G  C  I  K  V  L  L  F  D  E  T  E  G  N  F  A  K  G  R  D  L  *  *  F  V  E  S  F  S  *  I  E  *  D  P  F  G  L  D  C  V  C  R  D  V  *  D  E  N  E  F  Y  C  M  Y  V  *  Y  N  D  Q  C  F  V  *  R  R  K  V  E  E  G  K  R  V  H  *  T  H  A  V  F  R  G  *  A  E  F  N  I  F  *  Y  C  D  S  W  L  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6207" stop="6878"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLRESVTSSQWHFIKHVTGELNPTLISATLPELRSSPDRVLTFIENLGPDCLDISCYCLAISILSRLPSPKQATHLLKQVISSRFASPNEIFYGLVSAREKLVVKSSIVLDLLVRAYCELKKGEDALKCFYLMKQKGILPKVETCNDLLSLFLKLNRTHLAWIVYAEMFRMKMSSTVCTFNIMINVLCREGKLKKAKEFIEHMQCSGVKPNLISFNTVIHGYCL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="9155" PGL_stop="9624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9155" e_stop="9624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="9155" e_stop="9624" e_length="470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9155" stop="9624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598115" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGCTTCAAGTTGTTTTTGTCTCGAGATCCAGGAAATACATTAAACAACTTCACTTCTGTTTTAGCCCCAACTTTACTCCAATGTTTTTTTCTCTTCTGATACAACAACTCAGATAGATAGTTTCTGACCACTAACTCCAATCCCCATGGCTAGATTTTCATCAAGAAACAGATGTTCATATCCTTTACTGGTTTGTATCTTGGTGGGGTTCTTGATTTTGCTTCATTTCTCATCTTTGGGTAGTTATAGAGGTATTCAAAAAGGGCAGATTCAAGAAAGATATGAAGAGTTGGAGGAGATCCAAATTCCTCAATCAAGTGGAAGCCAATCCTCAGAAGCCAACATGCTAATTGATGAATTCCTTGATAAGTCTTCTAAACTCAGGCACATTTTCTTTCCTGACATGACGACTAGCATAGACCCTAGAAAGAATACTAAAGATGACACCTTTTACTATTACCCTGGGA</gDNA_template>
            <first_frame> F  S  F  K  L  F  L  S  R  D  P  G  N  T  L  N  N  F  T  S  V  L  A  P  T  L  L  Q  C  F  F  L  F  *  Y  N  N  S  D  R  *  F  L  T  T  N  S  N  P  H  G  *  I  F  I  K  K  Q  M  F  I  S  F  T  G  L  Y  L  G  G  V  L  D  F  A  S  F  L  I  F  G  *  L  *  R  Y  S  K  R  A  D  S  R  K  I  *  R  V  G  G  D  P  N  S  S  I  K  W  K  P  I  L  R  S  Q  H  A  N  *  *  I  P  *  *  V  F  *  T  Q  A  H  F  L  S  *  H  D  D  *  H  R  P  *  K  E  Y  *  R  *  H  L  L  L  L  P  W   </first_frame>
            <second_frame>  L  A  S  S  C  F  C  L  E  I  Q  E  I  H  *  T  T  S  L  L  F  *  P  Q  L  Y  S  N  V  F  F  S  S  D  T  T  T  Q  I  D  S  F  *  P  L  T  P  I  P  M  A  R  F  S  S  R  N  R  C  S  Y  P  L  L  V  C  I  L  V  G  F  L  I  L  L  H  F  S  S  L  G  S  Y  R  G  I  Q  K  G  Q  I  Q  E  R  Y  E  E  L  E  E  I  Q  I  P  Q  S  S  G  S  Q  S  S  E  A  N  M  L  I  D  E  F  L  D  K  S  S  K  L  R  H  I  F  F  P  D  M  T  T  S  I  D  P  R  K  N  T  K  D  D  T  F  Y  Y  Y  P  G  </second_frame>
            <third_frame>   *  L  Q  V  V  F  V  S  R  S  R  K  Y  I  K  Q  L  H  F  C  F  S  P  N  F  T  P  M  F  F  S  L  L  I  Q  Q  L  R  *  I  V  S  D  H  *  L  Q  S  P  W  L  D  F  H  Q  E  T  D  V  H  I  L  Y  W  F  V  S  W  W  G  S  *  F  C  F  I  S  H  L  W  V  V  I  E  V  F  K  K  G  R  F  K  K  D  M  K  S  W  R  R  S  K  F  L  N  Q  V  E  A  N  P  Q  K  P  T  C  *  L  M  N  S  L  I  S  L  L  N  S  G  T  F  S  F  L  T  *  R  L  A  *  T  L  E  R  I  L  K  M  T  P  F  T  I  T  L  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9285" stop="9623"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLTPIPMARFSSRNRCSYPLLVCILVGFLILLHFSSLGSYRGIQKGQIQERYEELEEIQIPQSSGSQSSEANMLIDEFLDKSSKLRHIFFPDMTTSIDPRKNTKDDTFYYYPG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="11693" PGL_stop="11007"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11693" e_stop="11007"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="11693" e_stop="11007" e_length="687"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11693" stop="11007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572810" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTAGTTCTTTCTTTTCAAAGATTTTGTATAAACTTATTACAACTTCAATTTATTTATTTATTTTGTATAGGTTGGTGGTCAGAAAACAATGGCAACAATGACAACATTCTCTGCAGCAACAGTAAGTTCAGCAGCCACTATAGGCACAGGCAGAAGCTCTTCCCAGAAAGTAACCAAAGTGAAGTACATTAGTGGTTTGAATTCATTTGAAGGGCTAAAGGCAAACAACCATGTTGCCTCATTAGGCCTCCCTATGTCCACTGAACAATCTTTTGCAAAGATTGTTAGCTCATTGAAAACCCCATCATCACAAGCCAAAGGTGGAGCTTTGTCCTCTACCTGCAATGCTGCTCTTGAGATTTTCAGGATTGCTTCCATTATTCCTGGCTTGGTTCTTGTTGGAGTTGCTGTTGGATTCGTCCTCCTCCGAATTGAAACTGCTGTAGAGGAATCTGAATGAAACTTTGGTCTGTTAAAACATTTTCTTTTTTCCTGCATCAAGATTCACTCTCTTTCTAATTCCTATAATCCTCTGTTCTGAGGTAGAATTGATTTGTTTTGGATATATATGTTAAACTTATAAACTATGAGTTCTTCCAGAAACTCTAACCCTCTTATTGTATACACTTCTTTCTAAATGTTATGTGTTGCCTGGCAAGATTTTCACCTGTAGGGCTCTGACCAT</gDNA_template>
            <first_frame> F  *  F  F  L  F  K  D  F  V  *  T  Y  Y  N  F  N  L  F  I  Y  F  V  *  V  G  G  Q  K  T  M  A  T  M  T  T  F  S  A  A  T  V  S  S  A  A  T  I  G  T  G  R  S  S  S  Q  K  V  T  K  V  K  Y  I  S  G  L  N  S  F  E  G  L  K  A  N  N  H  V  A  S  L  G  L  P  M  S  T  E  Q  S  F  A  K  I  V  S  S  L  K  T  P  S  S  Q  A  K  G  G  A  L  S  S  T  C  N  A  A  L  E  I  F  R  I  A  S  I  I  P  G  L  V  L  V  G  V  A  V  G  F  V  L  L  R  I  E  T  A  V  E  E  S  E  *  N  F  G  L  L  K  H  F  L  F  S  C  I  K  I  H  S  L  S  N  S  Y  N  P  L  F  *  G  R  I  D  L  F  W  I  Y  M  L  N  L  *  T  M  S  S  S  R  N  S  N  P  L  I  V  Y  T  S  F  *  M  L  C  V  A  W  Q  D  F  H  L  *  G  S  D  H </first_frame>
            <second_frame>  F  S  S  F  F  S  K  I  L  Y  K  L  I  T  T  S  I  Y  L  F  I  L  Y  R  L  V  V  R  K  Q  W  Q  Q  *  Q  H  S  L  Q  Q  Q  *  V  Q  Q  P  L  *  A  Q  A  E  A  L  P  R  K  *  P  K  *  S  T  L  V  V  *  I  H  L  K  G  *  R  Q  T  T  M  L  P  H  *  A  S  L  C  P  L  N  N  L  L  Q  R  L  L  A  H  *  K  P  H  H  H  K  P  K  V  E  L  C  P  L  P  A  M  L  L  L  R  F  S  G  L  L  P  L  F  L  A  W  F  L  L  E  L  L  L  D  S  S  S  S  E  L  K  L  L  *  R  N  L  N  E  T  L  V  C  *  N  I  F  F  F  P  A  S  R  F  T  L  F  L  I  P  I  I  L  C  S  E  V  E  L  I  C  F  G  Y  I  C  *  T  Y  K  L  *  V  L  P  E  T  L  T  L  L  L  Y  T  L  L  S  K  C  Y  V  L  P  G  K  I  F  T  C  R  A  L  T   </second_frame>
            <third_frame>   L  V  L  S  F  Q  R  F  C  I  N  L  L  Q  L  Q  F  I  Y  L  F  C  I  G  W  W  S  E  N  N  G  N  N  D  N  I  L  C  S  N  S  K  F  S  S  H  Y  R  H  R  Q  K  L  F  P  E  S  N  Q  S  E  V  H  *  W  F  E  F  I  *  R  A  K  G  K  Q  P  C  C  L  I  R  P  P  Y  V  H  *  T  I  F  C  K  D  C  *  L  I  E  N  P  I  I  T  S  Q  R  W  S  F  V  L  Y  L  Q  C  C  S  *  D  F  Q  D  C  F  H  Y  S  W  L  G  S  C  W  S  C  C  W  I  R  P  P  P  N  *  N  C  C  R  G  I  *  M  K  L  W  S  V  K  T  F  S  F  F  L  H  Q  D  S  L  S  F  *  F  L  *  S  S  V  L  R  *  N  *  F  V  L  D  I  Y  V  K  L  I  N  Y  E  F  F  Q  K  L  *  P  S  Y  C  I  H  F  F  L  N  V  M  C  C  L  A  R  F  S  P  V  G  L  *  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11621" stop="11232"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGGQKTMATMTTFSAATVSSAATIGTGRSSSQKVTKVKYISGLNSFEGLKANNHVASLGLPMSTEQSFAKIVSSLKTPSSQAKGGALSSTCNAALEIFRIASIIPGLVLVGVAVGFVLLRIETAVEESE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="19031" PGL_stop="21722"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19031" e_stop="19612"/>
            <exon e_start="19682" e_stop="19747"/>
            <exon e_start="21027" e_stop="21722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.908" acc_prob="0.997" e_score="0.998"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="19031" e_stop="19612" e_length="582"/>
          </exon>
          <intron i_serial="1" don_prob="0.908" acc_prob="0.997">
            <gDNA_intron_boundary i_start="19613" i_stop="19681" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19682" e_stop="19747" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="19748" i_stop="21026" i_length="1279"/>
          </intron>
          <exon e_serial="3" e_score="0.999">
            <gDNA_exon_boundary e_start="21027" e_stop="21722" e_length="696"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19031" stop="19612"/>
              <exon start="19682" stop="19747"/>
              <exon start="21027" stop="21722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19031" stop="19612"/>
              <exon start="19682" stop="19724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATGGAAAAAGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACGGTAAAAAAAGATTGAATCTAAGGATTTTTAGGTTACTAATTTTTCTTGTTTCTTTAACTGGTCATTCCTTGTTCTTGAGTTGTTGAATTAATGTTTTGCTGATAATCGTACTCCCTTTCTTTTTATGTTAAAGCTCGGTAAGATGTCCATGATTCTTGAATTCTTGATTGAAGTTTCCGGTTCTTTACTTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTGCTTGTTCACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTA : GATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAG : TTAACGTGGATGATTCTGTGGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTCTGGAGGATTCCCTGGAGACAAGTTTGGTAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTTTGAATGGTATATCTTCATCGGAAATTTATTCTGCTGAATACATGAAGGATGACCAATAGACGTACTACAAGACATCTGAACTAAGAAATTGTTTCTTATCAGAGGGCTGCTAGTAAATATATATGAGCTCATCTTTCTTCTGCATATTCGGATATTTTACTTGTATGAAGGAGTCGATTAACATGCTTTATTA</gDNA_template>
            <first_frame> I  W  K  K  M  L  *  K  A  D  E  L  P  M  W  A  T  S  S  S  S  E  S  S  H  D  D  G  I  R  P  R  R  R  *  N  D  R  V  L  L  P  C  D  G  K  K  R  L  N  L  R  I  F  R  L  L  I  F  L  V  S  L  T  G  H  S  L  F  L  S  C  *  I  N  V  L  L  I  I  V  L  P  F  F  L  C  *  S  S  V  R  C  P  *  F  L  N  S  *  L  K  F  P  V  L  Y  F  L  N  *  C  S  L  I  R  F  L  P  I  V  L  L  A  C  S  H  G  C  G  Q  I  I  S  G  Y  A  H  C  S  F  *  R  I  L  V  N  F  L  W  H  V  S  E  E  S  S  H  S  K  V  S  F  *  E  A  L  R  M  *  N  Y  Y  V  M  E  G  G  L  L  F  F  H  Q  H  C  I  Q  L  Y  K  Y  L  L  :  D  L  L  S  I  A  N  V  A  E  Q  H  E  C  G  I  S  *  G  L  F  K  :  L  T  W  M  I  L  W  M  I  L  C  V  N  F  E  A  F  L  I  A  *  C  V  K  F  S  A  I  L  H  I  L  L  M  N  L  L  P  L  L  Q  T  *  I  C  F  G  M  W  R  N  T  *  T  G  F  N  T  K  Q  L  *  V  S  *  *  L  L  L  Q  *  *  R  *  K  D  G  S  H  G  D  E  E  V  G  P  S  S  E  D  N  G  W  H  S  D  N  E  L  N  S  K  G  F  T  P  *  V  V  *  R  D  V  E  P  I  S  S  A  V  D  L  K  N  G  S  V  L  Q  R  E  F  F  S  S  G  G  F  P  G  D  K  F  G  S  S  S  Q  L  T  R  G  P  V  N  K  V  S  L  T  S  S  P  V  S  T  S  F  E  W  Y  I  F  I  G  N  L  F  C  *  I  H  E  G  *  P  I  D  V  L  Q  D  I  *  T  K  K  L  F  L  I  R  G  L  L  V  N  I  Y  E  L  I  F  L  L  H  I  R  I  F  Y  L  Y  E  G  V  D  *  H  A  L  L </first_frame>
            <second_frame>  Y  G  K  R  C  C  R  K  P  M  N  Y  L  C  G  R  P  L  L  L  L  N  P  V  M  T  T  E  S  G  H  D  D  G  K  M  I  E  S  Y  S  R  A  T  V  K  K  D  *  I  *  G  F  L  G  Y  *  F  F  L  F  L  *  L  V  I  P  C  S  *  V  V  E  L  M  F  C  *  *  S  Y  S  L  S  F  Y  V  K  A  R  *  D  V  H  D  S  *  I  L  D  *  S  F  R  F  F  T  S  *  I  D  V  P  *  F  V  F  F  P  L  F  Y  L  L  V  H  M  V  V  A  R  S  F  Q  V  M  H  I  V  V  F  R  E  S  *  S  I  F  F  G  M  Y  Q  K  N  H  L  I  L  K  C  L  S  R  R  H  L  E  C  E  T  T  M  *  W  K  G  A  C  F  S  F  I  S  I  A  F  S  F  T  N  I  C  * :   I  S  C  Q  L  P  M  W  L  S  N  M  N  V  G  F  L  R  A  S  S  S :   *  R  G  *  F  C  G  *  Y  C  A  S  I  S  R  R  F  *  *  L  D  A  *  S  F  R  L  S  F  I  F  F  L  *  T  Y  Y  L  Y  F  R  H  K  F  V  L  E  C  G  E  I  H  K  L  A  L  T  Q  S  N  S  E  S  V  N  S  F  S  Y  N  D  N  G  E  K  M  E  A  T  G  M  R  K  *  D  L  V  Q  K  T  M  G  G  I  R  T  M  S  *  I  Q  K  D  L  P  L  R  W  F  N  V  T  *  S  Q  *  V  L  R  W  T  *  R  M  V  L  C  S  S  V  N  S  S  V  L  E  D  S  L  E  T  S  L  V  V  A  P  S  *  Q  E  V  Q  L  T  R  Y  L  L  L  L  P  L  F  L  L  L  L  N  G  I  S  S  S  E  I  Y  S  A  E  Y  M  K  D  D  Q  *  T  Y  Y  K  T  S  E  L  R  N  C  F  L  S  E  G  C  *  *  I  Y  M  S  S  S  F  F  C  I  F  G  Y  F  T  C  M  K  E  S  I  N  M  L  Y   </second_frame>
            <third_frame>   M  E  K  D  V  V  E  S  R  *  T  T  Y  V  G  D  L  F  F  F  *  I  Q  S  *  R  R  N  P  A  T  T  T  V  K  *  S  S  L  T  P  V  R  R  *  K  K  I  E  S  K  D  F  *  V  T  N  F  S  C  F  F  N  W  S  F  L  V  L  E  L  L  N  *  C  F  A  D  N  R  T  P  F  L  F  M  L  K  L  G  K  M  S  M  I  L  E  F  L  I  E  V  S  G  S  L  L  L  E  L  M  F  L  N  S  F  S  S  H  C  F  T  C  L  F  T  W  L  W  P  D  H  F  R  L  C  T  L  *  F  L  E  N  P  S  Q  F  S  L  A  C  I  R  R  I  I  S  F  *  S  V  F  L  G  G  T  *  N  V  K  L  L  C  D  G  R  G  L  A  F  L  S  S  A  L  H  S  A  L  Q  I  S  A   : R  S  L  V  N  C  Q  C  G  *  A  T  *  M  W  D  F  L  G  P  L  Q   : V  N  V  D  D  S  V  D  D  I  V  R  Q  F  R  G  V  S  D  S  L  M  R  K  V  F  G  Y  P  S  Y  S  S  Y  E  P  T  T  S  T  S  D  I  N  L  F  W  N  V  E  K  Y  I  N  W  L  *  H  K  A  T  L  S  Q  L  I  A  S  L  T  M  I  T  V  K  R  W  K  P  R  G  *  G  S  R  T  *  F  R  R  Q  W  V  A  F  G  Q  *  V  E  F  K  R  I  Y  P  L  G  G  L  T  *  R  R  A  N  K  F  C  G  G  L  E  E  W  F  C  A  P  A  *  I  L  Q  F  W  R  I  P  W  R  Q  V  W  *  *  L  P  V  N  K  R  S  S  *  Q  G  I  S  Y  F  F  P  C  F  Y  F  F  *  M  V  Y  L  H  R  K  F  I  L  L  N  T  *  R  M  T  N  R  R  T  T  R  H  L  N  *  E  I  V  S  Y  Q  R  A  A  S  K  Y  I  *  A  H  L  S  S  A  Y  S  D  I  L  L  V  *  R  S  R  L  T  C  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21357" stop="21566"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RDVEPISSAVDLKNGSVLQREFFSSGGFPGDKFGSSSQLTRGPVNKVSLTSSPVSTSFEWYIFIGNLFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19720" stop="19747"/>
                    <exon start="21027" stop="21196"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MWDFLGPLQVNVDDSVDDIVRQFRGVSDSLMRKVFGYPSYSSYEPTTSTSDINLFWNVEKYINWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19255" stop="19449"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFADNRTPFLFMLKLGKMSMILEFLIEVSGSLLLELMFLNSFSSHCFTCLFTWLWPDHFRLCTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19041" e_stop="19163"/>
            <exon e_start="19434" e_stop="19747"/>
            <exon e_start="21027" e_stop="21541"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19041" e_stop="19163" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19164" i_stop="19433" i_length="270"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19434" e_stop="19747" e_length="314"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="19748" i_stop="21026" i_length="1279"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="21027" e_stop="21541" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19041" stop="19163"/>
              <exon start="19434" stop="19747"/>
              <exon start="21027" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571358" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGTTGTAGAAAGCCGATGAACTACCTATGTGGGCGACCTCTTCTTCTTCTGAATCCAGTCATGACGACGGAATCCGGCCACGACGACGGTAAAATGATCGAGTCTTACTCCCGTGCGACG : GTTATGCACATTGTAGTTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATGTATCAGAAGAATCATCTCATTCTAAAGTGTCTTTCTAGGAGGCACTTAGAATGTGAAACTACTATGTGATGGAAGGGGGCTTGCTTTTCTTTCATCAGCATTGCATTCAGCTTTACAAATATCTGCTAGTATGTTTCTGCACTTCTTTTATATCTATTTGTGCCTTCTGGTTGCTTTAAATGTTCTTTCTCTATCAGGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAATGTGGGATTTCTTAGGGCCTCTTCAAG : TTAACGTGGATGATTCTGTGGATGATATTGTGCGTCAATTTCGAGGCGTTTCTGATAGCTTGATGCGTAAAGTTTTCGGCTATCCTTCATATTCTTCTTATGAACCTACTACCTCTACTTCAGACATAAATTTGTTTTGGAATGTGGAGAAATACATAAACTGGCTTTAACACAAAGCAACTCTGAGTCAGTTAATAGCTTCTCTTACAATGATAACGGTGAAAAGATGGAAGCCACGGGGATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCGGACAATGAGTTGAATTCAAAAGGATTTACCCCTTAGGTGGTTTAACGTGACGTAGAGCCAATAAGTTCTGCGGTGGACTTGAAGAATGGTTCTGTGCTCCAGCGTGAATTCTTCAGTTCTGGAGGATTCCCTGGAGACAAGTTTGGTAGTAGCTCCCAGTTAACAAGAGGTCCAGTTAACAAGGTATCTCTTACTTCTTCCCCTGTTTCTACTTCTTTTGAATGGTATAT</gDNA_template>
            <first_frame> R  C  C  R  K  P  M  N  Y  L  C  G  R  P  L  L  L  L  N  P  V  M  T  T  E  S  G  H  D  D  G  K  M  I  E  S  Y  S  R  A  T  :  V  M  H  I  V  V  F  R  E  S  *  S  I  F  F  G  M  Y  Q  K  N  H  L  I  L  K  C  L  S  R  R  H  L  E  C  E  T  T  M  *  W  K  G  A  C  F  S  F  I  S  I  A  F  S  F  T  N  I  C  *  Y  V  S  A  L  L  L  Y  L  F  V  P  S  G  C  F  K  C  S  F  S  I  R  I  S  C  Q  L  P  M  W  L  S  N  M  N  V  G  F  L  R  A  S  S  S :   *  R  G  *  F  C  G  *  Y  C  A  S  I  S  R  R  F  *  *  L  D  A  *  S  F  R  L  S  F  I  F  F  L  *  T  Y  Y  L  Y  F  R  H  K  F  V  L  E  C  G  E  I  H  K  L  A  L  T  Q  S  N  S  E  S  V  N  S  F  S  Y  N  D  N  G  E  K  M  E  A  T  G  M  R  K  *  D  L  V  Q  K  T  M  G  G  I  R  T  M  S  *  I  Q  K  D  L  P  L  R  W  F  N  V  T  *  S  Q  *  V  L  R  W  T  *  R  M  V  L  C  S  S  V  N  S  S  V  L  E  D  S  L  E  T  S  L  V  V  A  P  S  *  Q  E  V  Q  L  T  R  Y  L  L  L  L  P  L  F  L  L  L  L  N  G  I  </first_frame>
            <second_frame>  D  V  V  E  S  R  *  T  T  Y  V  G  D  L  F  F  F  *  I  Q  S  *  R  R  N  P  A  T  T  T  V  K  *  S  S  L  T  P  V  R  R :   L  C  T  L  *  F  L  E  N  P  S  Q  F  S  L  A  C  I  R  R  I  I  S  F  *  S  V  F  L  G  G  T  *  N  V  K  L  L  C  D  G  R  G  L  A  F  L  S  S  A  L  H  S  A  L  Q  I  S  A  S  M  F  L  H  F  F  Y  I  Y  L  C  L  L  V  A  L  N  V  L  S  L  S  G  S  L  V  N  C  Q  C  G  *  A  T  *  M  W  D  F  L  G  P  L  Q   : V  N  V  D  D  S  V  D  D  I  V  R  Q  F  R  G  V  S  D  S  L  M  R  K  V  F  G  Y  P  S  Y  S  S  Y  E  P  T  T  S  T  S  D  I  N  L  F  W  N  V  E  K  Y  I  N  W  L  *  H  K  A  T  L  S  Q  L  I  A  S  L  T  M  I  T  V  K  R  W  K  P  R  G  *  G  S  R  T  *  F  R  R  Q  W  V  A  F  G  Q  *  V  E  F  K  R  I  Y  P  L  G  G  L  T  *  R  R  A  N  K  F  C  G  G  L  E  E  W  F  C  A  P  A  *  I  L  Q  F  W  R  I  P  W  R  Q  V  W  *  *  L  P  V  N  K  R  S  S  *  Q  G  I  S  Y  F  F  P  C  F  Y  F  F  *  M  V  Y </second_frame>
            <third_frame>   M  L  *  K  A  D  E  L  P  M  W  A  T  S  S  S  S  E  S  S  H  D  D  G  I  R  P  R  R  R  *  N  D  R  V  L  L  P  C  D   : G  Y  A  H  C  S  F  *  R  I  L  V  N  F  L  W  H  V  S  E  E  S  S  H  S  K  V  S  F  *  E  A  L  R  M  *  N  Y  Y  V  M  E  G  G  L  L  F  F  H  Q  H  C  I  Q  L  Y  K  Y  L  L  V  C  F  C  T  S  F  I  S  I  C  A  F  W  L  L  *  M  F  F  L  Y  Q  D  L  L  S  I  A  N  V  A  E  Q  H  E  C  G  I  S  *  G  L  F  K  :  L  T  W  M  I  L  W  M  I  L  C  V  N  F  E  A  F  L  I  A  *  C  V  K  F  S  A  I  L  H  I  L  L  M  N  L  L  P  L  L  Q  T  *  I  C  F  G  M  W  R  N  T  *  T  G  F  N  T  K  Q  L  *  V  S  *  *  L  L  L  Q  *  *  R  *  K  D  G  S  H  G  D  E  E  V  G  P  S  S  E  D  N  G  W  H  S  D  N  E  L  N  S  K  G  F  T  P  *  V  V  *  R  D  V  E  P  I  S  S  A  V  D  L  K  N  G  S  V  L  Q  R  E  F  F  S  S  G  G  F  P  G  D  K  F  G  S  S  S  Q  L  T  R  G  P  V  N  K  V  S  L  T  S  S  P  V  S  T  S  F  E  W  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19720" stop="19747"/>
                    <exon start="21027" stop="21196"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MWDFLGPLQVNVDDSVDDIVRQFRGVSDSLMRKVFGYPSYSSYEPTTSTSDINLFWNVEKYINWL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="38262" PGL_stop="39040"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38262" e_stop="39040"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="38262" e_stop="39040" e_length="779"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38262" stop="39040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571357" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTCATTCCTGGTTCTTAAATTAATGTTTTGCTGATAATTGTACTTCCTTTTTATGTTAATGTCCATGGTTCTTGAATTCTTGAATTGAAGTTACCGGTTCTTTAATTCTTGAATTGATGTTCCTTCTTTCGTCTTCTTCCCATTGTTTTTCCTTATTTGTTCACATGGTTGTAGCAAGATCAATTTTAGGTTATATGCATATTATAGTTAAATTTTATTGTTTTTAAATTGACGTTCATGGTTTCTTGAATTGTTTTCGATTTAGGTTACTACTTTTTCATATTTATGTTTCTGGTTCTTAAATTGATTTACCTAGTTATTCAATTCTTGAATTCATCGTTCATGAATTAACTTACCTGGTTATTGAATTCTTGAATTCATGTCCTGCATTTAATGTTAATGTTCAATTGGTAACTTCTTTTTAGTAAAAGTTCGGGGATATGTTCCTAGTTCTTGAATTCTCGAATTGAAGTTCCCGGTTCTTTAATTCTTGATTAAAGTCCCGGGTTCTTTAATTCTTGAATTGATGTTCCTTAATTCGTTTTCTTCCCATTGTTTTACTTATTTGTACACATGGTTGTGGCCAGATCATTTCAGGTTATGCACATTGTAATTTTTAGAGAATCCTAGTCAATTTTCTTTGGCATATATCAGAAGAATCATCTCATAAAGTCACTCTAAAGTGTCTTTCGAGAGGCACTTAGAATGTGAAACTACTATGTGATGAAAGGAGGCTTGCTTTACATAGGTTGGAAGAAATTTCAGGAAAATTACCAAG</gDNA_template>
            <first_frame> G  H  S  W  F  L  N  *  C  F  A  D  N  C  T  S  F  L  C  *  C  P  W  F  L  N  S  *  I  E  V  T  G  S  L  I  L  E  L  M  F  L  L  S  S  S  S  H  C  F  S  L  F  V  H  M  V  V  A  R  S  I  L  G  Y  M  H  I  I  V  K  F  Y  C  F  *  I  D  V  H  G  F  L  N  C  F  R  F  R  L  L  L  F  H  I  Y  V  S  G  S  *  I  D  L  P  S  Y  S  I  L  E  F  I  V  H  E  L  T  Y  L  V  I  E  F  L  N  S  C  P  A  F  N  V  N  V  Q  L  V  T  S  F  *  *  K  F  G  D  M  F  L  V  L  E  F  S  N  *  S  S  R  F  F  N  S  *  L  K  S  R  V  L  *  F  L  N  *  C  S  L  I  R  F  L  P  I  V  L  L  I  C  T  H  G  C  G  Q  I  I  S  G  Y  A  H  C  N  F  *  R  I  L  V  N  F  L  W  H  I  S  E  E  S  S  H  K  V  T  L  K  C  L  S  R  G  T  *  N  V  K  L  L  C  D  E  R  R  L  A  L  H  R  L  E  E  I  S  G  K  L  P   </first_frame>
            <second_frame>  V  I  P  G  S  *  I  N  V  L  L  I  I  V  L  P  F  Y  V  N  V  H  G  S  *  I  L  E  L  K  L  P  V  L  *  F  L  N  *  C  S  F  F  R  L  L  P  I  V  F  P  Y  L  F  T  W  L  *  Q  D  Q  F  *  V  I  C  I  L  *  L  N  F  I  V  F  K  L  T  F  M  V  S  *  I  V  F  D  L  G  Y  Y  F  F  I  F  M  F  L  V  L  K  L  I  Y  L  V  I  Q  F  L  N  S  S  F  M  N  *  L  T  W  L  L  N  S  *  I  H  V  L  H  L  M  L  M  F  N  W  *  L  L  F  S  K  S  S  G  I  C  S  *  F  L  N  S  R  I  E  V  P  G  S  L  I  L  D  *  S  P  G  F  F  N  S  *  I  D  V  P  *  F  V  F  F  P  L  F  Y  L  F  V  H  M  V  V  A  R  S  F  Q  V  M  H  I  V  I  F  R  E  S  *  S  I  F  F  G  I  Y  Q  K  N  H  L  I  K  S  L  *  S  V  F  R  E  A  L  R  M  *  N  Y  Y  V  M  K  G  G  L  L  Y  I  G  W  K  K  F  Q  E  N  Y  Q  </second_frame>
            <third_frame>   S  F  L  V  L  K  L  M  F  C  *  *  L  Y  F  L  F  M  L  M  S  M  V  L  E  F  L  N  *  S  Y  R  F  F  N  S  *  I  D  V  P  S  F  V  F  F  P  L  F  F  L  I  C  S  H  G  C  S  K  I  N  F  R  L  Y  A  Y  Y  S  *  I  L  L  F  L  N  *  R  S  W  F  L  E  L  F  S  I  *  V  T  T  F  S  Y  L  C  F  W  F  L  N  *  F  T  *  L  F  N  S  *  I  H  R  S  *  I  N  L  P  G  Y  *  I  L  E  F  M  S  C  I  *  C  *  C  S  I  G  N  F  F  L  V  K  V  R  G  Y  V  P  S  S  *  I  L  E  L  K  F  P  V  L  *  F  L  I  K  V  P  G  S  L  I  L  E  L  M  F  L  N  S  F  S  S  H  C  F  T  Y  L  Y  T  W  L  W  P  D  H  F  R  L  C  T  L  *  F  L  E  N  P  S  Q  F  S  L  A  Y  I  R  R  I  I  S  *  S  H  S  K  V  S  F  E  R  H  L  E  C  E  T  T  M  *  *  K  E  A  C  F  T  *  V  G  R  N  F  R  K  I  T  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C01HBa0008L19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="58183" PGL_stop="56761"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58183" e_stop="58024"/>
            <exon e_start="57936" e_stop="57573"/>
            <exon e_start="57480" e_stop="57338"/>
            <exon e_start="57240" e_stop="56761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.998" e_score="0.994"/>
          <exon-intron don_prob="0.999" acc_prob="0.725" e_score="1.000"/>
          <exon-intron don_prob="0.304" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="58183" e_stop="58024" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58023" i_stop="57937" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57936" e_stop="57573" e_length="364"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.725">
            <gDNA_intron_boundary i_start="57572" i_stop="57481" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57480" e_stop="57338" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.304" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57337" i_stop="57241" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="57240" e_stop="56761" e_length="480"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58183" stop="58024"/>
              <exon start="57936" stop="57573"/>
              <exon start="57480" stop="57338"/>
              <exon start="57240" stop="56761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572360" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCTAAACGGAAAAGGCCCCGAAAATAGCTCATAAATACACTCCATCTTCCCATCTTTTCAAATCAATTGAATTGTGATATGATGGAAAACTCGTTGTTGAAGATAGACAAAAGAGCAATTTTCTACAAGGTTTTCTGTCCCTCAATCACTAATGAACTG : AGAATCCCAGCCCATTTTCTCAGGCATGTATCAGAAGAATCACCTGATAAAGCCACCCTCAAGTGTCTTTCTGGAGGCACTTGGAATGTGAAACTACAGTGTGATGAAGATGGTTTGCTTATACAAAAGGGTTGGAAGAAATTTCAAAAAAATAATCAATTAGAAAATGGGGAATATCTCGTGTTTAGGTACGATGGCGCTCTGCAATTCACAATAAGAATTTTCAGCAAGAATGGACTGGAGAGGCAAGTGAAATCAACAAACATGGTAGAAAATCAACAAGCTTCAATAGATGGAGGCAGCAAGCGTAAAAGGCCAGAAAAATTCCCTAAAAAGACTTGTGCTAACGGTGAAAATGAAACAG : AAGATGTATGTTGTGTTTCCTTAGAACATGAAACTCGAAGAAAAAGAGCTGCACTTGTGACAGAAGAGGACCTTCTCACTCCAAATATTCCTCAATTTGTGAAATGTTTGAAAGGCTACAATGTGAAAAAGTCTTGTTTCTTG : TACGTTCCAAGATGGTTCTCTGAACAACTTTCGACATCAGGCAATAAGAGAGCAGCTGTCCTCCGTAATTCAGAAGGAAAAGGGTGGAAAGTGAATTGTATAACACAAAATGGATATCATGCTTTCTGTGGGGGATGGAAACAGTTTGTGAGTGATAACAATCTTAAGGAAGGACAGGTCTGTGTTTTTCAGCTTGTCAATGCAAATGAACTAAAGGTTTCTGTTTTCAACGATCCTTCGGAATCTCTGTTGAAACTTGCTGCACAAAGATGATAAATCTTAGTTTTGAACTGCTACGATTTGATGTCATTATGTTGGAATCTGAACTCTGTAGCTGCTTCACATGAACAACCGTGTTTTCATTTTCCTTTTTCTGTATTTGAGTAATCAGAGATGTTCCTTCATTTGTTTTTTCCTTTCTAGTTTTTGTTCCTTTATATGTTCACATGGTTATAGCCACATCAAAGGTTGGTAAGGTGT</gDNA_template>
            <first_frame> C  *  T  E  K  A  P  K  I  A  H  K  Y  T  P  S  S  H  L  F  K  S  I  E  L  *  Y  D  G  K  L  V  V  E  D  R  Q  K  S  N  F  L  Q  G  F  L  S  L  N  H  *  *  T   : E  N  P  S  P  F  S  Q  A  C  I  R  R  I  T  *  *  S  H  P  Q  V  S  F  W  R  H  L  E  C  E  T  T  V  *  *  R  W  F  A  Y  T  K  G  L  E  E  I  S  K  K  *  S  I  R  K  W  G  I  S  R  V  *  V  R  W  R  S  A  I  H  N  K  N  F  Q  Q  E  W  T  G  E  A  S  E  I  N  K  H  G  R  K  S  T  S  F  N  R  W  R  Q  Q  A  *  K  A  R  K  I  P  *  K  D  L  C  *  R  *  K  *  N  R :   R  C  M  L  C  F  L  R  T  *  N  S  K  K  K  S  C  T  C  D  R  R  G  P  S  H  S  K  Y  S  S  I  C  E  M  F  E  R  L  Q  C  E  K  V  L  F  L   : V  R  S  K  M  V  L  *  T  T  F  D  I  R  Q  *  E  S  S  C  P  P  *  F  R  R  K  R  V  E  S  E  L  Y  N  T  K  W  I  S  C  F  L  W  G  M  E  T  V  C  E  *  *  Q  S  *  G  R  T  G  L  C  F  S  A  C  Q  C  K  *  T  K  G  F  C  F  Q  R  S  F  G  I  S  V  E  T  C  C  T  K  M  I  N  L  S  F  E  L  L  R  F  D  V  I  M  L  E  S  E  L  C  S  C  F  T  *  T  T  V  F  S  F  S  F  F  C  I  *  V  I  R  D  V  P  S  F  V  F  S  F  L  V  F  V  P  L  Y  V  H  M  V  I  A  T  S  K  V  G  K  V  </first_frame>
            <second_frame>  A  K  R  K  R  P  R  K  *  L  I  N  T  L  H  L  P  I  F  S  N  Q  L  N  C  D  M  M  E  N  S  L  L  K  I  D  K  R  A  I  F  Y  K  V  F  C  P  S  I  T  N  E  L  :  R  I  P  A  H  F  L  R  H  V  S  E  E  S  P  D  K  A  T  L  K  C  L  S  G  G  T  W  N  V  K  L  Q  C  D  E  D  G  L  L  I  Q  K  G  W  K  K  F  Q  K  N  N  Q  L  E  N  G  E  Y  L  V  F  R  Y  D  G  A  L  Q  F  T  I  R  I  F  S  K  N  G  L  E  R  Q  V  K  S  T  N  M  V  E  N  Q  Q  A  S  I  D  G  G  S  K  R  K  R  P  E  K  F  P  K  K  T  C  A  N  G  E  N  E  T   : E  D  V  C  C  V  S  L  E  H  E  T  R  R  K  R  A  A  L  V  T  E  E  D  L  L  T  P  N  I  P  Q  F  V  K  C  L  K  G  Y  N  V  K  K  S  C  F  L  :  Y  V  P  R  W  F  S  E  Q  L  S  T  S  G  N  K  R  A  A  V  L  R  N  S  E  G  K  G  W  K  V  N  C  I  T  Q  N  G  Y  H  A  F  C  G  G  W  K  Q  F  V  S  D  N  N  L  K  E  G  Q  V  C  V  F  Q  L  V  N  A  N  E  L  K  V  S  V  F  N  D  P  S  E  S  L  L  K  L  A  A  Q  R  *  *  I  L  V  L  N  C  Y  D  L  M  S  L  C  W  N  L  N  S  V  A  A  S  H  E  Q  P  C  F  H  F  P  F  S  V  F  E  *  S  E  M  F  L  H  L  F  F  P  F  *  F  L  F  L  Y  M  F  T  W  L  *  P  H  Q  R  L  V  R  C </second_frame>
            <third_frame>   L  N  G  K  G  P  E  N  S  S  *  I  H  S  I  F  P  S  F  Q  I  N  *  I  V  I  *  W  K  T  R  C  *  R  *  T  K  E  Q  F  S  T  R  F  S  V  P  Q  S  L  M  N  * :   E  S  Q  P  I  F  S  G  M  Y  Q  K  N  H  L  I  K  P  P  S  S  V  F  L  E  A  L  G  M  *  N  Y  S  V  M  K  M  V  C  L  Y  K  R  V  G  R  N  F  K  K  I  I  N  *  K  M  G  N  I  S  C  L  G  T  M  A  L  C  N  S  Q  *  E  F  S  A  R  M  D  W  R  G  K  *  N  Q  Q  T  W  *  K  I  N  K  L  Q  *  M  E  A  A  S  V  K  G  Q  K  N  S  L  K  R  L  V  L  T  V  K  M  K  Q  :  K  M  Y  V  V  F  P  *  N  M  K  L  E  E  K  E  L  H  L  *  Q  K  R  T  F  S  L  Q  I  F  L  N  L  *  N  V  *  K  A  T  M  *  K  S  L  V  S  C :   T  F  Q  D  G  S  L  N  N  F  R  H  Q  A  I  R  E  Q  L  S  S  V  I  Q  K  E  K  G  G  K  *  I  V  *  H  K  M  D  I  M  L  S  V  G  D  G  N  S  L  *  V  I  T  I  L  R  K  D  R  S  V  F  F  S  L  S  M  Q  M  N  *  R  F  L  F  S  T  I  L  R  N  L  C  *  N  L  L  H  K  D  D  K  S  *  F  *  T  A  T  I  *  C  H  Y  V  G  I  *  T  L  *  L  L  H  M  N  N  R  V  F  I  F  L  F  L  Y  L  S  N  Q  R  C  S  F  I  C  F  F  L  S  S  F  C  S  F  I  C  S  H  G  Y  S  H  I  K  G  W  *  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58155" stop="58024"/>
                    <exon start="57936" stop="57573"/>
                    <exon start="57480" stop="57338"/>
                    <exon start="57240" stop="56968"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LINTLHLPIFSNQLNCDMMENSLLKIDKRAIFYKVFCPSITNELRIPAHFLRHVSEESPDKATLKCLSGGTWNVKLQCDEDGLLIQKGWKKFQKNNQLENGEYLVFRYDGALQFTIRIFSKNGLERQVKSTNMVENQQASIDGGSKRKRPEKFPKKTCANGENETEDVCCVSLEHETRRKRAALVTEEDLLTPNIPQFVKCLKGYNVKKSCFLYVPRWFSEQLSTSGNKRAAVLRNSEGKGWKVNCITQNGYHAFCGGWKQFVSDNNLKEGQVCVFQLVNANELKVSVFNDPSESLLKLAAQR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="64380" PGL_stop="59465"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64380" e_stop="64080"/>
            <exon e_start="62428" e_stop="62349"/>
            <exon e_start="61180" e_stop="61045"/>
            <exon e_start="60173" e_stop="59987"/>
            <exon e_start="59509" e_stop="59465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.978" e_score="0.980"/>
          <exon-intron don_prob="0.649" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.347" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.951" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="64380" e_stop="64080" e_length="301"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.978">
            <gDNA_intron_boundary i_start="64079" i_stop="62429" i_length="1651"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62428" e_stop="62349" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="0.649" acc_prob="0.000">
            <gDNA_intron_boundary i_start="62348" i_stop="61181" i_length="1168"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61180" e_stop="61045" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.347">
            <gDNA_intron_boundary i_start="61044" i_stop="60174" i_length="871"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60173" e_stop="59987" e_length="187"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.951">
            <gDNA_intron_boundary i_start="59986" i_stop="59510" i_length="477"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59509" e_stop="59465" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64380" stop="64080"/>
              <exon start="62428" stop="62349"/>
              <exon start="61180" stop="61045"/>
              <exon start="60173" stop="59987"/>
              <exon start="59509" stop="59465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAACTCTGAGTCAGTTAATAGTTTCTCTGACAATGATGACGGTGATAAAGATGGAAGCCACGGGCATGAGGAAGTAGGACCTAGTTCAGAAGACAATGGGTGGCATTCAGACAATGAGTTGAATTCAAAAGGATTTCCCCCTCGGGTGGTTAAACATGACGAAGAGATGGTAAACTCAGTGGCTGATTTGAAGAATGGTTCTGGGCTACAACGTAAATCAGTCAGTTCTGGAGGATTTTCAGAGACAAGTTTGGCAGTAGTTCCAAGTCAACAAGAGGATCTAGTTGGAGTGCCACCAGAG : TGGACGCCGCCCAACTTAAGTGTACCTATCTTAAATTTGGTGGACAAGATTTTTCAGCTGAATAGAAGAGGCTGGCTAAG : AAGACAGGTATTTTGGATATCAAAGGAAATTATGCAGTTAATGATGGAGGATGCTATTGATGATTGGCTGTTAAGGCAAATTCATTGGCTACGGAGAGATGATATTATTGCTTTGGGAATTAAATGGATTCAAGAT : GTTCTCTGGCCCAATGGCATTTTCTTCATAAAATTAAGAAATATTGTTGAAAGCAGCAATGAACCAAATCAAGGATCTGTTCATAGCACGAAACAATCTGGAGGAAGTAAGGTCTCTAAGGCAGGATCTTTTGAGGAGCAGCTTGAGGCTACTCGTAGGGCAAGTGATGTGAAAAAGATGCTCTATG : ATGGTGCTCCCGCCACTTTGGTCAGCTTAATTGGGCACAAGCAGT</gDNA_template>
            <first_frame> *  L  *  V  S  *  *  F  L  *  Q  *  *  R  *  *  R  W  K  P  R  A  *  G  S  R  T  *  F  R  R  Q  W  V  A  F  R  Q  *  V  E  F  K  R  I  S  P  S  G  G  *  T  *  R  R  D  G  K  L  S  G  *  F  E  E  W  F  W  A  T  T  *  I  S  Q  F  W  R  I  F  R  D  K  F  G  S  S  S  K  S  T  R  G  S  S  W  S  A  T  R   : V  D  A  A  Q  L  K  C  T  Y  L  K  F  G  G  Q  D  F  S  A  E  *  K  R  L  A  K  :  K  T  G  I  L  D  I  K  G  N  Y  A  V  N  D  G  G  C  Y  *  *  L  A  V  K  A  N  S  L  A  T  E  R  *  Y  Y  C  F  G  N  *  M  D  S  R   : C  S  L  A  Q  W  H  F  L  H  K  I  K  K  Y  C  *  K  Q  Q  *  T  K  S  R  I  C  S  *  H  E  T  I  W  R  K  *  G  L  *  G  R  I  F  *  G  A  A  *  G  Y  S  *  G  K  *  C  E  K  D  A  L  * :   W  C  S  R  H  F  G  Q  L  N  W  A  Q  A   </first_frame>
            <second_frame>  N  S  E  S  V  N  S  F  S  D  N  D  D  G  D  K  D  G  S  H  G  H  E  E  V  G  P  S  S  E  D  N  G  W  H  S  D  N  E  L  N  S  K  G  F  P  P  R  V  V  K  H  D  E  E  M  V  N  S  V  A  D  L  K  N  G  S  G  L  Q  R  K  S  V  S  S  G  G  F  S  E  T  S  L  A  V  V  P  S  Q  Q  E  D  L  V  G  V  P  P  E  :  W  T  P  P  N  L  S  V  P  I  L  N  L  V  D  K  I  F  Q  L  N  R  R  G  W  L  R :   R  Q  V  F  W  I  S  K  E  I  M  Q  L  M  M  E  D  A  I  D  D  W  L  L  R  Q  I  H  W  L  R  R  D  D  I  I  A  L  G  I  K  W  I  Q  D  :  V  L  W  P  N  G  I  F  F  I  K  L  R  N  I  V  E  S  S  N  E  P  N  Q  G  S  V  H  S  T  K  Q  S  G  G  S  K  V  S  K  A  G  S  F  E  E  Q  L  E  A  T  R  R  A  S  D  V  K  K  M  L  Y   : D  G  A  P  A  T  L  V  S  L  I  G  H  K  Q  </second_frame>
            <third_frame>   T  L  S  Q  L  I  V  S  L  T  M  M  T  V  I  K  M  E  A  T  G  M  R  K  *  D  L  V  Q  K  T  M  G  G  I  Q  T  M  S  *  I  Q  K  D  F  P  L  G  W  L  N  M  T  K  R  W  *  T  Q  W  L  I  *  R  M  V  L  G  Y  N  V  N  Q  S  V  L  E  D  F  Q  R  Q  V  W  Q  *  F  Q  V  N  K  R  I  *  L  E  C  H  Q  S :   G  R  R  P  T  *  V  Y  L  S  *  I  W  W  T  R  F  F  S  *  I  E  E  A  G  *   : E  D  R  Y  F  G  Y  Q  R  K  L  C  S  *  *  W  R  M  L  L  M  I  G  C  *  G  K  F  I  G  Y  G  E  M  I  L  L  L  W  E  L  N  G  F  K  M :   F  S  G  P  M  A  F  S  S  *  N  *  E  I  L  L  K  A  A  M  N  Q  I  K  D  L  F  I  A  R  N  N  L  E  E  V  R  S  L  R  Q  D  L  L  R  S  S  L  R  L  L  V  G  Q  V  M  *  K  R  C  S  M  :  M  V  L  P  P  L  W  S  A  *  L  G  T  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64379" stop="64080"/>
                    <exon start="62428" stop="62349"/>
                    <exon start="61180" stop="61045"/>
                    <exon start="60173" stop="59987"/>
                    <exon start="59509" stop="59466"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSESVNSFSDNDDGDKDGSHGHEEVGPSSEDNGWHSDNELNSKGFPPRVVKHDEEMVNSVADLKNGSGLQRKSVSSGGFSETSLAVVPSQQEDLVGVPPEWTPPNLSVPILNLVDKIFQLNRRGWLRRQVFWISKEIMQLMMEDAIDDWLLRQIHWLRRDDIIALGIKWIQDVLWPNGIFFIKLRNIVESSNEPNQGSVHSTKQSGGSKVSKAGSFEEQLEATRRASDVKKMLYDGAPATLVSLIGHKQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="82392" PGL_stop="84455"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82392" e_stop="82699"/>
            <exon e_start="83201" e_stop="83274"/>
            <exon e_start="83889" e_stop="84455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.960" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82392" e_stop="82699" e_length="308"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="82700" i_stop="83200" i_length="501"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83201" e_stop="83274" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.960">
            <gDNA_intron_boundary i_start="83275" i_stop="83888" i_length="614"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83889" e_stop="84455" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82392" stop="82699"/>
              <exon start="83201" stop="83274"/>
              <exon start="83889" stop="84193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82452" stop="82699"/>
              <exon start="83201" stop="83274"/>
              <exon start="83889" stop="84455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580940" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCCTTCTGACTTCTTCTTCTCTATTATAAAATATCCTTAAATTTTCATAATTTGTTATCTGTTTCTTTTTTTACAGAAACGATGATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCG : ATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAA : AAAGAAGCACCTAAGGAGGAGGTAGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAGAATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGAGGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAAGAGGAGAAAGCTAGAATGCCAGATTCACCCTATACTAAACTGCTCAGAGCCAAAGGAACACACCCTGTTTGGTACTGATTACACTTGACTACTGGTATGGAGCTTCATAAAAAGCACGCTCTTTTGGAGCTTCAGATAATCAGGTCAAACAATGGAATTGAATAGTATTTTCTTGGCCAATGTGGTAAAAATTATCTGGTGATGTAATATTAAGCCTGTGGGGATGTTATCACGTATTTTTGTTAGTGTTAGCATAAAATAGTGTGCTTTGTCGGTAGGTTATAGGAGTTGCCATTTGTTCTGAATGTAAATATGGTTTGTTTTTGAAAATTATAATAGCAGTGAAGTTTCTAA</gDNA_template>
            <first_frame> Q  F  L  L  T  S  S  S  L  L  *  N  I  L  K  F  S  *  F  V  I  C  F  F  F  Y  R  N  D  D  V  T  I  N  G  S  Q  F  L  I  F  Y  F  S  R  W  S  *  *  *  A  S  F  F  K  I  S  S  K  F  V  D  N  S  L  L  F  K  K  S  C  L  H  T  K  A  R  A  F  *  Q  N  Q  V  *  *  S  F  *  R  S  P  F  D  R  K  I  *  K  *  T  C  R :   L  L  F  C  S  R  R  *  *  F  L  *  L  L  A  S  L  F  *  T  Q  R  S  *   : K  R  S  T  *  G  G  G  R  E  A  N  T  S  S  R  G  S  E  N  S  H  W  L  L  T  W  S  F  R  H  A  Q  S  Q  K  G  K  Q  R  I  S  Q  T  C  Q  S  *  C  T  T  G  R  R  T  V  S  Y  T  R  W  I  A  K  V  E  R  R  A  R  G  R  G  E  S  *  N  A  R  F  T  L  Y  *  T  A  Q  S  Q  R  N  T  P  C  L  V  L  I  T  L  D  Y  W  Y  G  A  S  *  K  A  R  S  F  G  A  S  D  N  Q  V  K  Q  W  N  *  I  V  F  S  W  P  M  W  *  K  L  S  G  D  V  I  L  S  L  W  G  C  Y  H  V  F  L  L  V  L  A  *  N  S  V  L  C  R  *  V  I  G  V  A  I  C  S  E  C  K  Y  G  L  F  L  K  I  I  I  A  V  K  F  L  </first_frame>
            <second_frame>  N  S  F  *  L  L  L  L  Y  Y  K  I  S  L  N  F  H  N  L  L  S  V  S  F  F  T  E  T  M  M  L  Q  S  M  A  L  N  S  L  S  S  T  S  L  V  G  V  N  N  E  L  H  S  S  R  F  Q  V  N  S  S  T  I  R  C  C  S  R  S  H  A  Y  I  P  K  L  E  P  F  S  R  T  K  F  D  R  V  F  K  D  P  P  L  I  E  K  S  E  N  E  L  A   : D  Y  C  S  V  L  E  G  D  D  S  Y  S  C  W  Q  A  Y  F  E  L  K  D  L  E  :  K  E  A  P  K  E  E  V  E  R  L  I  L  Q  A  G  G  V  K  T  L  I  G  C  L  H  G  V  S  D  M  H  K  A  K  K  E  S  K  E  S  A  K  P  V  N  L  D  A  Q  R  A  G  G  L  C  P  I  P  D  G  L  P  K  S  R  E  E  L  E  E  E  E  K  A  R  M  P  D  S  P  Y  T  K  L  L  R  A  K  G  T  H  P  V  W  Y  *  L  H  L  T  T  G  M  E  L  H  K  K  H  A  L  L  E  L  Q  I  I  R  S  N  N  G  I  E  *  Y  F  L  G  Q  C  G  K  N  Y  L  V  M  *  Y  *  A  C  G  D  V  I  T  Y  F  C  *  C  *  H  K  I  V  C  F  V  G  R  L  *  E  L  P  F  V  L  N  V  N  M  V  C  F  *  K  L  *  *  Q  *  S  F  * </second_frame>
            <third_frame>   I  P  S  D  F  F  F  S  I  I  K  Y  P  *  I  F  I  I  C  Y  L  F  L  F  L  Q  K  R  *  C  Y  N  Q  W  L  S  I  P  Y  L  L  L  L  S  L  E  L  I  M  S  F  I  L  Q  D  F  K  *  I  R  R  Q  F  V  V  V  Q  E  V  M  L  T  Y  Q  S  S  S  L  L  A  E  P  S  L  I  E  F  L  K  I  P  L  *  S  K  N  L  K  M  N  L  P  :  I  I  V  L  F  *  K  V  M  I  L  I  A  A  G  K  P  I  L  N  S  K  I  L  K :   K  K  H  L  R  R  R  *  R  G  *  Y  F  K  Q  G  E  *  K  L  S  L  A  A  Y  M  E  F  Q  T  C  T  K  P  K  R  K  A  K  N  Q  P  N  L  S  I  L  M  H  N  G  Q  E  D  C  V  L  Y  Q  M  D  C  Q  S  R  E  K  S  S  R  K  R  R  K  L  E  C  Q  I  H  P  I  L  N  C  S  E  P  K  E  H  T  L  F  G  T  D  Y  T  *  L  L  V  W  S  F  I  K  S  T  L  F  W  S  F  R  *  S  G  Q  T  M  E  L  N  S  I  F  L  A  N  V  V  K  I  I  W  *  C  N  I  K  P  V  G  M  L  S  R  I  F  V  S  V  S  I  K  *  C  A  L  S  V  G  Y  R  S  C  H  L  F  *  M  *  I  W  F  V  F  E  N  Y  N  S  S  E  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82405" stop="82699"/>
                    <exon start="83201" stop="83274"/>
                    <exon start="83889" stop="84179"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLLLYYKISLNFHNLLSVSFFTETMMLQSMALNSLSSTSLVGVNNELHSSRFQVNSSTIRCCSRSHAYIPKLEPFSRTKFDRVFKDPPLIEKSENELADYCSVLEGDDSYSCWQAYFELKDLEKEAPKEEVERLILQAGGVKTLIGCLHGVSDMHKAKKESKESAKPVNLDAQRAGGLCPIPDGLPKSREELEEEEKARMPDSPYTKLLRAKGTHPVWY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82480" e_stop="82699"/>
            <exon e_start="83201" e_stop="83666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82480" e_stop="82699" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="82700" i_stop="83200" i_length="501"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83201" e_stop="83666" e_length="466"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82480" stop="82699"/>
              <exon start="83201" stop="83666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGTTACAATCAATGGCTCTCAATTCCTTATCTTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTTACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCG : ATTATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAGTAAGTTCTTTATCAGCACGTTCTTCAAATAAAAATTATGTAGCATTCTTATTTGGCCGTGACATGCTACTGTATTATTATGTGTTGTTAGATAATAGGGTTTTCCAGTTTCAGACCTCACTTGCGAGATTACACTGAATATGTTGTTGTAGATGAATTAATTAACCTTTGGACGTTATTAGTACAGAAAACTTAAAACTCGAGGTTCAATATTTCCTTGGAACTATGAGGTAGAAGTTGATGAAAAAGAGCTAACAAAAATGTGTTTTCATTGTGTGTGTATGACAACCACATATAGTAAGCTAACAATTACATCTGAATTGTATACTTAAGTTAGAAATGTCCATATAAACAATAGCACTAGGTGATTTCTTCTTGTCTACCCAAGTCTT</gDNA_template>
            <first_frame> M  L  Q  S  M  A  L  N  S  L  S  S  T  S  L  V  G  V  N  N  E  L  H  S  S  R  F  Q  V  N  S  S  T  I  R  C  C  S  R  S  H  A  Y  I  P  K  L  E  P  F  S  R  T  K  F  D  R  V  F  K  D  P  P  L  I  E  K  S  E  N  E  L  A   : D  Y  C  S  V  L  E  G  D  D  S  Y  S  C  W  Q  A  Y  F  E  L  K  D  L  E  V  S  S  L  S  A  R  S  S  N  K  N  Y  V  A  F  L  F  G  R  D  M  L  L  Y  Y  Y  V  L  L  D  N  R  V  F  Q  F  Q  T  S  L  A  R  L  H  *  I  C  C  C  R  *  I  N  *  P  L  D  V  I  S  T  E  N  L  K  L  E  V  Q  Y  F  L  G  T  M  R  *  K  L  M  K  K  S  *  Q  K  C  V  F  I  V  C  V  *  Q  P  H  I  V  S  *  Q  L  H  L  N  C  I  L  K  L  E  M  S  I  *  T  I  A  L  G  D  F  F  L  S  T  Q  V   </first_frame>
            <second_frame>  C  Y  N  Q  W  L  S  I  P  Y  L  L  L  L  S  L  E  L  I  M  S  F  I  L  Q  D  F  K  *  I  R  R  Q  F  V  V  V  Q  E  V  M  L  T  Y  Q  S  S  S  L  L  A  E  P  S  L  I  E  F  L  K  I  P  L  *  S  K  N  L  K  M  N  L  P  :  I  I  V  L  F  *  K  V  M  I  L  I  A  A  G  K  P  I  L  N  S  K  I  L  K  *  V  L  Y  Q  H  V  L  Q  I  K  I  M  *  H  S  Y  L  A  V  T  C  Y  C  I  I  M  C  C  *  I  I  G  F  S  S  F  R  P  H  L  R  D  Y  T  E  Y  V  V  V  D  E  L  I  N  L  W  T  L  L  V  Q  K  T  *  N  S  R  F  N  I  S  L  E  L  *  G  R  S  *  *  K  R  A  N  K  N  V  F  S  L  C  V  Y  D  N  H  I  *  *  A  N  N  Y  I  *  I  V  Y  L  S  *  K  C  P  Y  K  Q  *  H  *  V  I  S  S  C  L  P  K  S  </second_frame>
            <third_frame>   V  T  I  N  G  S  Q  F  L  I  F  Y  F  S  R  W  S  *  *  *  A  S  F  F  K  I  S  S  K  F  V  D  N  S  L  L  F  K  K  S  C  L  H  T  K  A  R  A  F  *  Q  N  Q  V  *  *  S  F  *  R  S  P  F  D  R  K  I  *  K  *  T  C  R :   L  L  F  C  S  R  R  *  *  F  L  *  L  L  A  S  L  F  *  T  Q  R  S  *  S  K  F  F  I  S  T  F  F  K  *  K  L  C  S  I  L  I  W  P  *  H  A  T  V  L  L  C  V  V  R  *  *  G  F  P  V  S  D  L  T  C  E  I  T  L  N  M  L  L  *  M  N  *  L  T  F  G  R  Y  *  Y  R  K  L  K  T  R  G  S  I  F  P  W  N  Y  E  V  E  V  D  E  K  E  L  T  K  M  C  F  H  C  V  C  M  T  T  T  Y  S  K  L  T  I  T  S  E  L  Y  T  *  V  R  N  V  H  I  N  N  S  T  R  *  F  L  L  V  Y  P  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82480" stop="82699"/>
                    <exon start="83201" stop="83412"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLQSMALNSLSSTSLVGVNNELHSSRFQVNSSTIRCCSRSHAYIPKLEPFSRTKFDRVFKDPPLIEKSENELADYCSVLEGDDSYSCWQAYFELKDLEVSSLSARSSNKNYVAFLFGRDMLLYYYVLLDNRVFQFQTSLARLH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="85327" PGL_stop="86169"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85327" e_stop="86169"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="85327" e_stop="86169" e_length="843"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85327" stop="86169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCCTTACCCACAGGTGGACTTACAAACATGGTGGCCTTGGGTTGCTTTCTCTTTTTCCTTGTATCTTTCTGTTCTTTTTCTCCATCATATTTTGCATTATCTGATATCGAAGCTGCTTCTATTGCCCGTCGCCAACTTTTAAGTAACAATGGCCAGCTTTCAAATACATACGAGTCTGAAATGACCATTAACATGAAATTTGAAAATGCCAGGTTGAAGAAAGCTTATGTTGCTCTTCAGGCATGGAAGAAGTCTATTTACTCTGATCCAACAAACTTCACAGCTAATTGGGAGGGTAGCAATGTTTGTGCCTATAACGGTGTCTTTTGTGACAATGCTCTTGATGATCCCAACATCTCTGTTGTTGCTGGGATTGATCTTAACCATGCAGACATAGCTGGACATCTCCCTGTGGAGCTTGGCCTCTTGGCTGATGTGAGTCTCATCCACATTAATTCTAACAGATTTTGTGGAATCATTCCCAAGAGCATTACAAATCTTACCCTTTTGGATGAGATTGATTTCAGCAACAACCGTTTCGTGGGGCCATTCCCTGATGTTGTGCTTGAGTTGCCTAAGCTCAACTATCTTGATCTTAGGTTCAACGACTTTGAAGGTCAAGTACCTTCCGCCCTATTTGAGAAGAATCTTGATGCAATATTGATCAACAATAACCGATTCCATTCCACCATCCCTGAAAGCTTGGGCAATTCCAATGCTTCCGTGGTGGTATTGGCCAATAACAAGTTCTATGGTTGCATCCCGAGCAGTATAGGTAAAATGGGCAACTCATTAGATGAGCTTGTATTCACCAACAACGAGCTCTCTGGTTGTTTGCCTGA</gDNA_template>
            <first_frame> G  L  T  H  R  W  T  Y  K  H  G  G  L  G  L  L  S  L  F  P  C  I  F  L  F  F  F  S  I  I  F  C  I  I  *  Y  R  S  C  F  Y  C  P  S  P  T  F  K  *  Q  W  P  A  F  K  Y  I  R  V  *  N  D  H  *  H  E  I  *  K  C  Q  V  E  E  S  L  C  C  S  S  G  M  E  E  V  Y  L  L  *  S  N  K  L  H  S  *  L  G  G  *  Q  C  L  C  L  *  R  C  L  L  *  Q  C  S  *  *  S  Q  H  L  C  C  C  W  D  *  S  *  P  C  R  H  S  W  T  S  P  C  G  A  W  P  L  G  *  C  E  S  H  P  H  *  F  *  Q  I  L  W  N  H  S  Q  E  H  Y  K  S  Y  P  F  G  *  D  *  F  Q  Q  Q  P  F  R  G  A  I  P  *  C  C  A  *  V  A  *  A  Q  L  S  *  S  *  V  Q  R  L  *  R  S  S  T  F  R  P  I  *  E  E  S  *  C  N  I  D  Q  Q  *  P  I  P  F  H  H  P  *  K  L  G  Q  F  Q  C  F  R  G  G  I  G  Q  *  Q  V  L  W  L  H  P  E  Q  Y  R  *  N  G  Q  L  I  R  *  A  C  I  H  Q  Q  R  A  L  W  L  F  A  * </first_frame>
            <second_frame>  A  L  P  T  G  G  L  T  N  M  V  A  L  G  C  F  L  F  F  L  V  S  F  C  S  F  S  P  S  Y  F  A  L  S  D  I  E  A  A  S  I  A  R  R  Q  L  L  S  N  N  G  Q  L  S  N  T  Y  E  S  E  M  T  I  N  M  K  F  E  N  A  R  L  K  K  A  Y  V  A  L  Q  A  W  K  K  S  I  Y  S  D  P  T  N  F  T  A  N  W  E  G  S  N  V  C  A  Y  N  G  V  F  C  D  N  A  L  D  D  P  N  I  S  V  V  A  G  I  D  L  N  H  A  D  I  A  G  H  L  P  V  E  L  G  L  L  A  D  V  S  L  I  H  I  N  S  N  R  F  C  G  I  I  P  K  S  I  T  N  L  T  L  L  D  E  I  D  F  S  N  N  R  F  V  G  P  F  P  D  V  V  L  E  L  P  K  L  N  Y  L  D  L  R  F  N  D  F  E  G  Q  V  P  S  A  L  F  E  K  N  L  D  A  I  L  I  N  N  N  R  F  H  S  T  I  P  E  S  L  G  N  S  N  A  S  V  V  V  L  A  N  N  K  F  Y  G  C  I  P  S  S  I  G  K  M  G  N  S  L  D  E  L  V  F  T  N  N  E  L  S  G  C  L  P   </second_frame>
            <third_frame>   P  Y  P  Q  V  D  L  Q  T  W  W  P  W  V  A  F  S  F  S  L  Y  L  S  V  L  F  L  H  H  I  L  H  Y  L  I  S  K  L  L  L  L  P  V  A  N  F  *  V  T  M  A  S  F  Q  I  H  T  S  L  K  *  P  L  T  *  N  L  K  M  P  G  *  R  K  L  M  L  L  F  R  H  G  R  S  L  F  T  L  I  Q  Q  T  S  Q  L  I  G  R  V  A  M  F  V  P  I  T  V  S  F  V  T  M  L  L  M  I  P  T  S  L  L  L  L  G  L  I  L  T  M  Q  T  *  L  D  I  S  L  W  S  L  A  S  W  L  M  *  V  S  S  T  L  I  L  T  D  F  V  E  S  F  P  R  A  L  Q  I  L  P  F  W  M  R  L  I  S  A  T  T  V  S  W  G  H  S  L  M  L  C  L  S  C  L  S  S  T  I  L  I  L  G  S  T  T  L  K  V  K  Y  L  P  P  Y  L  R  R  I  L  M  Q  Y  *  S  T  I  T  D  S  I  P  P  S  L  K  A  W  A  I  P  M  L  P  W  W  Y  W  P  I  T  S  S  M  V  A  S  R  A  V  *  V  K  W  A  T  H  *  M  S  L  Y  S  P  T  T  S  S  L  V  V  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85328" stop="86167"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>840</number_coding_nucleotides>
                  <number_encoded_amino_acids>280</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALPTGGLTNMVALGCFLFFLVSFCSFSPSYFALSDIEAASIARRQLLSNNGQLSNTYESEMTINMKFENARLKKAYVALQAWKKSIYSDPTNFTANWEGSNVCAYNGVFCDNALDDPNISVVAGIDLNHADIAGHLPVELGLLADVSLIHINSNRFCGIIPKSITNLTLLDEIDFSNNRFVGPFPDVVLELPKLNYLDLRFNDFEGQVPSALFEKNLDAILINNNRFHSTIPESLGNSNASVVVLANNKFYGCIPSSIGKMGNSLDELVFTNNELSGCLP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="87644" PGL_stop="87302"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87644" e_stop="87302"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="87644" e_stop="87302" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87644" stop="87302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572501" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATTGATAATGTAAATGTTTGTTTTTTCAGTTGATATGTGTGTTTACAGATTGATTGGTACACATTTTTTATGTAGTTTTTGTGCCATTGAAATCAGAATGGCGATCCTCTTAATAACCTTGGAAAATTGGTGGTGGTGGTGAGGCGTATAGCGAGCCCAATGTTGGGGGAAGAGCGACATCCTCAAAAGTGGGTGGAGGTGGAGACATTACGGGAGCTGGTGGTGGTGGAGAGTGGACTGGCGGTGGAGGAGAGAATACCAGAGCAGGTGGAGGTGAGGCGACTGGTGGTGGAGGTGAGTGGACTGGTGGTGGTGGTGAATGGACTGGTGGTGGTGGTGA</gDNA_template>
            <first_frame> T  I  D  N  V  N  V  C  F  F  S  *  Y  V  C  L  Q  I  D  W  Y  T  F  F  M  *  F  L  C  H  *  N  Q  N  G  D  P  L  N  N  L  G  K  L  V  V  V  V  R  R  I  A  S  P  M  L  G  E  E  R  H  P  Q  K  W  V  E  V  E  T  L  R  E  L  V  V  V  E  S  G  L  A  V  E  E  R  I  P  E  Q  V  E  V  R  R  L  V  V  E  V  S  G  L  V  V  V  V  N  G  L  V  V  V  V  </first_frame>
            <second_frame>  Q  L  I  M  *  M  F  V  F  S  V  D  M  C  V  Y  R  L  I  G  T  H  F  L  C  S  F  C  A  I  E  I  R  M  A  I  L  L  I  T  L  E  N  W  W  W  W  *  G  V  *  R  A  Q  C  W  G  K  S  D  I  L  K  S  G  W  R  W  R  H  Y  G  S  W  W  W  W  R  V  D  W  R  W  R  R  E  Y  Q  S  R  W  R  *  G  D  W  W  W  R  *  V  D  W  W  W  W  *  M  D  W  W  W  W  * </second_frame>
            <third_frame>   N  *  *  C  K  C  L  F  F  Q  L  I  C  V  F  T  D  *  L  V  H  I  F  Y  V  V  F  V  P  L  K  S  E  W  R  S  S  *  *  P  W  K  I  G  G  G  G  E  A  Y  S  E  P  N  V  G  G  R  A  T  S  S  K  V  G  G  G  G  D  I  T  G  A  G  G  G  G  E  W  T  G  G  G  G  E  N  T  R  A  G  G  G  E  A  T  G  G  G  G  E  W  T  G  G  G  G  E  W  T  G  G  G  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87551" stop="87303"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQNGDPLNNLGKLVVVVRRIASPMLGEERHPQKWVEVETLRELVVVESGLAVEERIPEQVEVRRLVVEVSGLVVVVNGLVVVV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87525" stop="87304"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PWKIGGGGEAYSEPNVGGRATSSKVGGGGDITGAGGGGEWTGGGGENTRAGGGEATGGGGEWTGGGGEWTGGGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="88297" PGL_stop="93504"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88297" e_stop="88661"/>
            <exon e_start="89702" e_stop="89893"/>
            <exon e_start="90101" e_stop="90198"/>
            <exon e_start="90863" e_stop="90953"/>
            <exon e_start="91038" e_stop="91241"/>
            <exon e_start="91325" e_stop="91581"/>
            <exon e_start="92016" e_stop="92106"/>
            <exon e_start="92221" e_stop="92437"/>
            <exon e_start="93035" e_stop="93504"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.922" e_score="0.995"/>
          <exon-intron don_prob="1.000" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.255" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88297" e_stop="88661" e_length="365"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="1.000">
            <gDNA_intron_boundary i_start="88662" i_stop="89701" i_length="1040"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89702" e_stop="89893" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="89894" i_stop="90100" i_length="207"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90101" e_stop="90198" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.986">
            <gDNA_intron_boundary i_start="90199" i_stop="90862" i_length="664"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90863" e_stop="90953" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.890">
            <gDNA_intron_boundary i_start="90954" i_stop="91037" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="91038" e_stop="91241" e_length="204"/>
          </exon>
          <intron i_serial="5" don_prob="0.793" acc_prob="0.922">
            <gDNA_intron_boundary i_start="91242" i_stop="91324" i_length="83"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91325" e_stop="91581" e_length="257"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.973">
            <gDNA_intron_boundary i_start="91582" i_stop="92015" i_length="434"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="92016" e_stop="92106" e_length="91"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.255">
            <gDNA_intron_boundary i_start="92107" i_stop="92220" i_length="114"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="92221" e_stop="92437" e_length="217"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="92438" i_stop="93034" i_length="597"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="93035" e_stop="93504" e_length="470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88297" stop="88661"/>
              <exon start="89702" stop="89893"/>
              <exon start="90101" stop="90198"/>
              <exon start="90863" stop="90953"/>
              <exon start="91038" stop="91241"/>
              <exon start="91325" stop="91581"/>
              <exon start="92016" stop="92106"/>
              <exon start="92221" stop="92437"/>
              <exon start="93035" stop="93504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88450" stop="88661"/>
              <exon start="89702" stop="89774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595307" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAACCTAATTTTTGTGAGACCAAATACAACGCCGGGTCGGGTCAGCAGTGCGGTGTAATAGTAATACGACGTCGCTTCAGAAGCACGTTTGAACTTTCACAACTAGATCGCGAACATTATCAATTTGGTTATTCGGTGAAAATCAATAGCTACATCGACGCTACGATTTTCTCAGATGGTGGACGACACGACGAAGCCTCCGACTGAAGCGATTGTTGAAAAGCAAGAAGAAGCTCAGCCACCTCCGGTACCAGAAGTCGCTGGCGGTGGTGGAGGATGGGGAGGATGGGGATTTTCTGCGTTTTCTTATATCTCGGACATTCAGAAAGCTGCTACCACCGCTGCCGAAGAGATCTCCCGCAAT : GCCGTTGAAGCTGCTAAATCAGCTGCAAAGAGCCTTGCAGATGTGCAAAATTCTCTGGAAGACACCGAATCCTTGAAAGAGGATGAACGAGAAGTATTGGTTGAAGAGGAGAGTGAAGATGAGAATGATAAAAAACGTAAGGCTGCTCTTGAAAAATTAGAGAAAGCTAGTGAAGACTCGTTGCTTGGCCAG : GGTTTGAGAGTTATTGACCATTCTGTCGAGAATTTCGCTTCAGGAGCTTGGCAAGCATTAGGAAATGCATTCAAAGGAAGTTCTGATTTAGTCCACAA : GCTTGAAAATTCGGCTGCAAGTATTGCTGAATCAGTTCAGCATGGTGGCTTACCTGCCACAACTGGTTCTGTTGCACCATCCATACTAGAG : ACTGGGAAAGCTTTTACTGCTAAAGGAATGCATGTGCTTGAGCTACTTGGAAAAGAAACTATGGATCTTCTGATCTCAGAAACTGGTATTAGAGTTGATTCAGGCTCCAAAGAAGGGGGAGGAGAAACAGATGAAGATCAGTTTTATGAAGAAGTTACATTTGATAGATGCTTTTATATTTATGGAGGTCCCGAGCAATTGGAG : GAGTTGGAGGCATTGTCCAACCATTATGCTTTGTTGTTCAACAGAAGAAAAGCGAAGATTCCATCTGATCAAAGGTCTTCGTATGATGGAAAATTTAAAGAGGTTCAAGAGATTTTTGACTTGAGTTCTGAAGCATATGAAAGTGGTAAAGAGTCGGGAAAAGGAAAGGAAGTTGAAACTGGCATTGCAGACAGCACAGATGAGGTGAAGAATTTGCATGATTCTAGTGTGGACAAGGCTGCAGAATTGGCAGCAGG : ATTTACAAATGTTTTGGTTGGACTAGCTCCTAATGACATGGTTCAAAGGACTGCTCGAAGACTGGATACTCTTCATTCAGAGGGTGTTCAT : AGACTTTCAGAGTTGTGTTGTTTTGCTGCGACTCAACTTGTAATGCTTGGGAAATCAATCATTTCAACTGCAAATAAAGTTGGGGACCAAGATGCAAATGTGGAAATTCTGAAAATGGAATGGCCGGAGGATTCAATTGAAAGAGCTAAGGTAATCCGATCAAAGGCATGTTCAATGACTCGATGTGTTGAAACAGTTTCTTCCAGCTTCATTACAG : GGATATCTGAAGTGTCTGAAGCGTATTTAGCAGCAGTGAAGAGTGTATCTGCTGATTCACATGAGGTTCCACAGAAATCAATCCAGGAGAAGGCCAATGCATATGCTGAGAATCTTCGTGCTGCTCATAGCACAGCCATGGGCAAAATTCAGGACGGCCTTCAATATTTACCCTATGTGGTCATCTCAACCTCAATGCCTGCTGCTTGAAGAATTTCTCAATGCAAAATTTCACACTTAGTCCTTCCTCCTTTTAGCTTTCCTTTTGCTCTCGCCCCGCCCTCCTCTCTTTCGTGTAAATAACTGTACTTGGTTAGTTTCCATATCCCTTTATCCCTTTGAGACTTGTAAAATCTGGGAGTGCTGACTTGTGTGATAGACTGATATCTCTATTAACTCTTAGCTACAGAGAGTATACTTTCCTTTCTGTTTTTATCTAAAGGAAATAAATAAATTTTATTTTATTGAAGA</gDNA_template>
            <first_frame> V  T  *  F  L  *  D  Q  I  Q  R  R  V  G  S  A  V  R  C  N  S  N  T  T  S  L  Q  K  H  V  *  T  F  T  T  R  S  R  T  L  S  I  W  L  F  G  E  N  Q  *  L  H  R  R  Y  D  F  L  R  W  W  T  T  R  R  S  L  R  L  K  R  L  L  K  S  K  K  K  L  S  H  L  R  Y  Q  K  S  L  A  V  V  E  D  G  E  D  G  D  F  L  R  F  L  I  S  R  T  F  R  K  L  L  P  P  L  P  K  R  S  P  A  M :   P  L  K  L  L  N  Q  L  Q  R  A  L  Q  M  C  K  I  L  W  K  T  P  N  P  *  K  R  M  N  E  K  Y  W  L  K  R  R  V  K  M  R  M  I  K  N  V  R  L  L  L  K  N  *  R  K  L  V  K  T  R  C  L  A  R :   V  *  E  L  L  T  I  L  S  R  I  S  L  Q  E  L  G  K  H  *  E  M  H  S  K  E  V  L  I  *  S  T   : S  L  K  I  R  L  Q  V  L  L  N  Q  F  S  M  V  A  Y  L  P  Q  L  V  L  L  H  H  P  Y  *  R :   L  G  K  L  L  L  L  K  E  C  M  C  L  S  Y  L  E  K  K  L  W  I  F  *  S  Q  K  L  V  L  E  L  I  Q  A  P  K  K  G  E  E  K  Q  M  K  I  S  F  M  K  K  L  H  L  I  D  A  F  I  F  M  E  V  P  S  N  W  R :   S  W  R  H  C  P  T  I  M  L  C  C  S  T  E  E  K  R  R  F  H  L  I  K  G  L  R  M  M  E  N  L  K  R  F  K  R  F  L  T  *  V  L  K  H  M  K  V  V  K  S  R  E  K  E  R  K  L  K  L  A  L  Q  T  A  Q  M  R  *  R  I  C  M  I  L  V  W  T  R  L  Q  N  W  Q  Q   : D  L  Q  M  F  W  L  D  *  L  L  M  T  W  F  K  G  L  L  E  D  W  I  L  F  I  Q  R  V  F  I :   D  F  Q  S  C  V  V  L  L  R  L  N  L  *  C  L  G  N  Q  S  F  Q  L  Q  I  K  L  G  T  K  M  Q  M  W  K  F  *  K  W  N  G  R  R  I  Q  L  K  E  L  R  *  S  D  Q  R  H  V  Q  *  L  D  V  L  K  Q  F  L  P  A  S  L  Q  :  G  Y  L  K  C  L  K  R  I  *  Q  Q  *  R  V  Y  L  L  I  H  M  R  F  H  R  N  Q  S  R  R  R  P  M  H  M  L  R  I  F  V  L  L  I  A  Q  P  W  A  K  F  R  T  A  F  N  I  Y  P  M  W  S  S  Q  P  Q  C  L  L  L  E  E  F  L  N  A  K  F  H  T  *  S  F  L  L  L  A  F  L  L  L  S  P  R  P  P  L  F  R  V  N  N  C  T  W  L  V  S  I  S  L  Y  P  F  E  T  C  K  I  W  E  C  *  L  V  *  *  T  D  I  S  I  N  S  *  L  Q  R  V  Y  F  P  F  C  F  Y  L  K  E  I  N  K  F  Y  F  I  E   </first_frame>
            <second_frame>  *  P  N  F  C  E  T  K  Y  N  A  G  S  G  Q  Q  C  G  V  I  V  I  R  R  R  F  R  S  T  F  E  L  S  Q  L  D  R  E  H  Y  Q  F  G  Y  S  V  K  I  N  S  Y  I  D  A  T  I  F  S  D  G  G  R  H  D  E  A  S  D  *  S  D  C  *  K  A  R  R  S  S  A  T  S  G  T  R  S  R  W  R  W  W  R  M  G  R  M  G  I  F  C  V  F  L  Y  L  G  H  S  E  S  C  Y  H  R  C  R  R  D  L  P  Q   : C  R  *  S  C  *  I  S  C  K  E  P  C  R  C  A  K  F  S  G  R  H  R  I  L  E  R  G  *  T  R  S  I  G  *  R  G  E  *  R  *  E  *  *  K  T  *  G  C  S  *  K  I  R  E  S  *  *  R  L  V  A  W  P   : G  F  E  S  Y  *  P  F  C  R  E  F  R  F  R  S  L  A  S  I  R  K  C  I  Q  R  K  F  *  F  S  P  Q  :  A  *  K  F  G  C  K  Y  C  *  I  S  S  A  W  W  L  T  C  H  N  W  F  C  C  T  I  H  T  R   : D  W  E  S  F  Y  C  *  R  N  A  C  A  *  A  T  W  K  R  N  Y  G  S  S  D  L  R  N  W  Y  *  S  *  F  R  L  Q  R  R  G  R  R  N  R  *  R  S  V  L  *  R  S  Y  I  *  *  M  L  L  Y  L  W  R  S  R  A  I  G   : G  V  G  G  I  V  Q  P  L  C  F  V  V  Q  Q  K  K  S  E  D  S  I  *  S  K  V  F  V  *  W  K  I  *  R  G  S  R  D  F  *  L  E  F  *  S  I  *  K  W  *  R  V  G  K  R  K  G  S  *  N  W  H  C  R  Q  H  R  *  G  E  E  F  A  *  F  *  C  G  Q  G  C  R  I  G  S  R  :  I  Y  K  C  F  G  W  T  S  S  *  *  H  G  S  K  D  C  S  K  T  G  Y  S  S  F  R  G  C  S   : *  T  F  R  V  V  L  F  C  C  D  S  T  C  N  A  W  E  I  N  H  F  N  C  K  *  S  W  G  P  R  C  K  C  G  N  S  E  N  G  M  A  G  G  F  N  *  K  S  *  G  N  P  I  K  G  M  F  N  D  S  M  C  *  N  S  F  F  Q  L  H  Y  R :   D  I  *  S  V  *  S  V  F  S  S  S  E  E  C  I  C  *  F  T  *  G  S  T  E  I  N  P  G  E  G  Q  C  I  C  *  E  S  S  C  C  S  *  H  S  H  G  Q  N  S  G  R  P  S  I  F  T  L  C  G  H  L  N  L  N  A  C  C  L  K  N  F  S  M  Q  N  F  T  L  S  P  S  S  F  *  L  S  F  C  S  R  P  A  L  L  S  F  V  *  I  T  V  L  G  *  F  P  Y  P  F  I  P  L  R  L  V  K  S  G  S  A  D  L  C  D  R  L  I  S  L  L  T  L  S  Y  R  E  Y  T  F  L  S  V  F  I  *  R  K  *  I  N  F  I  L  L  K  </second_frame>
            <third_frame>   N  L  I  F  V  R  P  N  T  T  P  G  R  V  S  S  A  V  *  *  *  Y  D  V  A  S  E  A  R  L  N  F  H  N  *  I  A  N  I  I  N  L  V  I  R  *  K  S  I  A  T  S  T  L  R  F  S  Q  M  V  D  D  T  T  K  P  P  T  E  A  I  V  E  K  Q  E  E  A  Q  P  P  P  V  P  E  V  A  G  G  G  G  G  W  G  G  W  G  F  S  A  F  S  Y  I  S  D  I  Q  K  A  A  T  T  A  A  E  E  I  S  R  N  :  A  V  E  A  A  K  S  A  A  K  S  L  A  D  V  Q  N  S  L  E  D  T  E  S  L  K  E  D  E  R  E  V  L  V  E  E  E  S  E  D  E  N  D  K  K  R  K  A  A  L  E  K  L  E  K  A  S  E  D  S  L  L  G  Q  :  G  L  R  V  I  D  H  S  V  E  N  F  A  S  G  A  W  Q  A  L  G  N  A  F  K  G  S  S  D  L  V  H  K :   L  E  N  S  A  A  S  I  A  E  S  V  Q  H  G  G  L  P  A  T  T  G  S  V  A  P  S  I  L  E  :  T  G  K  A  F  T  A  K  G  M  H  V  L  E  L  L  G  K  E  T  M  D  L  L  I  S  E  T  G  I  R  V  D  S  G  S  K  E  G  G  G  E  T  D  E  D  Q  F  Y  E  E  V  T  F  D  R  C  F  Y  I  Y  G  G  P  E  Q  L  E  :  E  L  E  A  L  S  N  H  Y  A  L  L  F  N  R  R  K  A  K  I  P  S  D  Q  R  S  S  Y  D  G  K  F  K  E  V  Q  E  I  F  D  L  S  S  E  A  Y  E  S  G  K  E  S  G  K  G  K  E  V  E  T  G  I  A  D  S  T  D  E  V  K  N  L  H  D  S  S  V  D  K  A  A  E  L  A  A  G :   F  T  N  V  L  V  G  L  A  P  N  D  M  V  Q  R  T  A  R  R  L  D  T  L  H  S  E  G  V  H  :  R  L  S  E  L  C  C  F  A  A  T  Q  L  V  M  L  G  K  S  I  I  S  T  A  N  K  V  G  D  Q  D  A  N  V  E  I  L  K  M  E  W  P  E  D  S  I  E  R  A  K  V  I  R  S  K  A  C  S  M  T  R  C  V  E  T  V  S  S  S  F  I  T   : G  I  S  E  V  S  E  A  Y  L  A  A  V  K  S  V  S  A  D  S  H  E  V  P  Q  K  S  I  Q  E  K  A  N  A  Y  A  E  N  L  R  A  A  H  S  T  A  M  G  K  I  Q  D  G  L  Q  Y  L  P  Y  V  V  I  S  T  S  M  P  A  A  *  R  I  S  Q  C  K  I  S  H  L  V  L  P  P  F  S  F  P  F  A  L  A  P  P  S  S  L  S  C  K  *  L  Y  L  V  S  F  H  I  P  L  S  L  *  D  L  *  N  L  G  V  L  T  C  V  I  D  *  Y  L  Y  *  L  L  A  T  E  S  I  L  S  F  L  F  L  S  K  G  N  K  *  I  L  F  Y  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88437" stop="88661"/>
                    <exon start="89702" stop="89893"/>
                    <exon start="90101" stop="90198"/>
                    <exon start="90863" stop="90953"/>
                    <exon start="91038" stop="91241"/>
                    <exon start="91325" stop="91581"/>
                    <exon start="92016" stop="92106"/>
                    <exon start="92221" stop="92437"/>
                    <exon start="93035" stop="93243"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1581</number_coding_nucleotides>
                  <number_encoded_amino_acids>527</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSIATSTLRFSQMVDDTTKPPTEAIVEKQEEAQPPPVPEVAGGGGGWGGWGFSAFSYISDIQKAATTAAEEISRNAVEAAKSAAKSLADVQNSLEDTESLKEDEREVLVEEESEDENDKKRKAALEKLEKASEDSLLGQGLRVIDHSVENFASGAWQALGNAFKGSSDLVHKLENSAASIAESVQHGGLPATTGSVAPSILETGKAFTAKGMHVLELLGKETMDLLISETGIRVDSGSKEGGGETDEDQFYEEVTFDRCFYIYGGPEQLEELEALSNHYALLFNRRKAKIPSDQRSSYDGKFKEVQEIFDLSSEAYESGKESGKGKEVETGIADSTDEVKNLHDSSVDKAAELAAGFTNVLVGLAPNDMVQRTARRLDTLHSEGVHRLSELCCFAATQLVMLGKSIISTANKVGDQDANVEILKMEWPEDSIERAKVIRSKACSMTRCVETVSSSFITGISEVSEAYLAAVKSVSADSHEVPQKSIQEKANAYAENLRAAHSTAMGKIQDGLQYLPYVVISTSMPAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="93771" PGL_stop="95213"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93771" e_stop="94286"/>
            <exon e_start="94495" e_stop="94822"/>
            <exon e_start="94892" e_stop="95213"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.924" acc_prob="0.986" e_score="0.988"/>
          <exon-intron don_prob="0.999" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="93771" e_stop="94286" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.924" acc_prob="0.986">
            <gDNA_intron_boundary i_start="94287" i_stop="94494" i_length="208"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94495" e_stop="94822" e_length="328"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.941">
            <gDNA_intron_boundary i_start="94823" i_stop="94891" i_length="69"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="94892" e_stop="95213" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93771" stop="94286"/>
              <exon start="94495" stop="94822"/>
              <exon start="94892" stop="95213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585450" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCCTCTCACTTGTAACAAAAAAAAAAGAAGAAGAAGAAAGTGAAATATCTATCATGGAAAATATGGATGAATCCTTTTTTCAAGAAACAGAGCACAGGCCAAAACAGAGTACAATTGAGGCAGAAGACATACCCATAATTGATCTCTCTCCCATTCTGACCTCTGATTCTTCAGAAATTACAAATCTTGTTGCACAAATTGGTGATGCATGCAAGAAATGGGGTTTCTTTCAAGTAATCAACCATGGAGTTCCATCTACCTGTCGCCAAAAAATAGAGAGAGCATCAAAGGAATTCTTCTTGCTTCCTACTGAAGAGAAGAGGAAAGTGAGTAGAGATGAAGATAACCCTATGGGGTTTTATGATACAGAGCATACCAAGAATGTTAGGGATTGGAAAGAAGTTTTTGATTTTGTTGTGGAGAATCCAACTCTCTTGCCTGCTTCTCATGAACCCCATGATACGGAGCTCAGGGAACTGAAGAATCAATGGCCTGATTTCCCTAACAATTTCAG : GGAGGCGTGTGAAGAATATGCTCGAGGCATTGAGAAATTGTCCTACAAGTTGCTAGAATTAATTGCTCTAAGCTTAGGCCTGTCATCCAAAAGGCTGAACAACTACTTTAAGGACCAAACAAGTTTTATGCGATTAAATTACTATCCGCTATGCCCAATTCATCATTTGGCTTTGGGAGTTGGGCGGCACAAGGATCCTGGTGCCCTGACTGTTCTTGCACAAGATGATGTTGGAGGCCTCGAGGTGAAACGCAAGGCAGATGGAGAGTGGATACAAGTGAAACCAACTCCAGATGCTTATATTATCAATGTTGGTGACATAATTCAG : GTTTGGAGCAATGACAGATATGAAAGTGTCGAACATAGGGTGATAGCAAGCTCCAACAAAGAGAGATTCTCCGTTCCATTTTTCTTCAACCCGTCTCACTATGTAATGGTTGAGCCTCTGGAAGAGCTTACGAATGAAGAAAGTCCAGCAAAATACAAGGCTTACAACTGGGGAAAATTTTTCACTACAAGAAACCTTAGCAATTTCAAGAAACTTAATGTTGAGAACATTCAAATATATCACTTTAGAAATGGTGACCTGTAATGACAAATGTAGTGTATGGGAAGTATTATTAAGGTGTTATTTTCAGCTGGAAGGAAAT</gDNA_template>
            <first_frame> S  P  L  T  C  N  K  K  K  R  R  R  R  K  *  N  I  Y  H  G  K  Y  G  *  I  L  F  S  R  N  R  A  Q  A  K  T  E  Y  N  *  G  R  R  H  T  H  N  *  S  L  S  H  S  D  L  *  F  F  R  N  Y  K  S  C  C  T  N  W  *  C  M  Q  E  M  G  F  L  S  S  N  Q  P  W  S  S  I  Y  L  S  P  K  N  R  E  S  I  K  G  I  L  L  A  S  Y  *  R  E  E  E  S  E  *  R  *  R  *  P  Y  G  V  L  *  Y  R  A  Y  Q  E  C  *  G  L  E  R  S  F  *  F  C  C  G  E  S  N  S  L  A  C  F  S  *  T  P  *  Y  G  A  Q  G  T  E  E  S  M  A  *  F  P  *  Q  F  Q  :  G  G  V  *  R  I  C  S  R  H  *  E  I  V  L  Q  V  A  R  I  N  C  S  K  L  R  P  V  I  Q  K  A  E  Q  L  L  *  G  P  N  K  F  Y  A  I  K  L  L  S  A  M  P  N  S  S  F  G  F  G  S  W  A  A  Q  G  S  W  C  P  D  C  S  C  T  R  *  C  W  R  P  R  G  E  T  Q  G  R  W  R  V  D  T  S  E  T  N  S  R  C  L  Y  Y  Q  C  W  *  H  N  S   : G  L  E  Q  *  Q  I  *  K  C  R  T  *  G  D  S  K  L  Q  Q  R  E  I  L  R  S  I  F  L  Q  P  V  S  L  C  N  G  *  A  S  G  R  A  Y  E  *  R  K  S  S  K  I  Q  G  L  Q  L  G  K  I  F  H  Y  K  K  P  *  Q  F  Q  E  T  *  C  *  E  H  S  N  I  S  L  *  K  W  *  P  V  M  T  N  V  V  Y  G  K  Y  Y  *  G  V  I  F  S  W  K  E   </first_frame>
            <second_frame>  L  L  S  L  V  T  K  K  K  E  E  E  E  S  E  I  S  I  M  E  N  M  D  E  S  F  F  Q  E  T  E  H  R  P  K  Q  S  T  I  E  A  E  D  I  P  I  I  D  L  S  P  I  L  T  S  D  S  S  E  I  T  N  L  V  A  Q  I  G  D  A  C  K  K  W  G  F  F  Q  V  I  N  H  G  V  P  S  T  C  R  Q  K  I  E  R  A  S  K  E  F  F  L  L  P  T  E  E  K  R  K  V  S  R  D  E  D  N  P  M  G  F  Y  D  T  E  H  T  K  N  V  R  D  W  K  E  V  F  D  F  V  V  E  N  P  T  L  L  P  A  S  H  E  P  H  D  T  E  L  R  E  L  K  N  Q  W  P  D  F  P  N  N  F  R :   E  A  C  E  E  Y  A  R  G  I  E  K  L  S  Y  K  L  L  E  L  I  A  L  S  L  G  L  S  S  K  R  L  N  N  Y  F  K  D  Q  T  S  F  M  R  L  N  Y  Y  P  L  C  P  I  H  H  L  A  L  G  V  G  R  H  K  D  P  G  A  L  T  V  L  A  Q  D  D  V  G  G  L  E  V  K  R  K  A  D  G  E  W  I  Q  V  K  P  T  P  D  A  Y  I  I  N  V  G  D  I  I  Q  :  V  W  S  N  D  R  Y  E  S  V  E  H  R  V  I  A  S  S  N  K  E  R  F  S  V  P  F  F  F  N  P  S  H  Y  V  M  V  E  P  L  E  E  L  T  N  E  E  S  P  A  K  Y  K  A  Y  N  W  G  K  F  F  T  T  R  N  L  S  N  F  K  K  L  N  V  E  N  I  Q  I  Y  H  F  R  N  G  D  L  *  *  Q  M  *  C  M  G  S  I  I  K  V  L  F  S  A  G  R  K  </second_frame>
            <third_frame>   S  S  H  L  *  Q  K  K  K  K  K  K  K  V  K  Y  L  S  W  K  I  W  M  N  P  F  F  K  K  Q  S  T  G  Q  N  R  V  Q  L  R  Q  K  T  Y  P  *  L  I  S  L  P  F  *  P  L  I  L  Q  K  L  Q  I  L  L  H  K  L  V  M  H  A  R  N  G  V  S  F  K  *  S  T  M  E  F  H  L  P  V  A  K  K  *  R  E  H  Q  R  N  S  S  C  F  L  L  K  R  R  G  K  *  V  E  M  K  I  T  L  W  G  F  M  I  Q  S  I  P  R  M  L  G  I  G  K  K  F  L  I  L  L  W  R  I  Q  L  S  C  L  L  L  M  N  P  M  I  R  S  S  G  N  *  R  I  N  G  L  I  S  L  T  I  S   : G  R  R  V  K  N  M  L  E  A  L  R  N  C  P  T  S  C  *  N  *  L  L  *  A  *  A  C  H  P  K  G  *  T  T  T  L  R  T  K  Q  V  L  C  D  *  I  T  I  R  Y  A  Q  F  I  I  W  L  W  E  L  G  G  T  R  I  L  V  P  *  L  F  L  H  K  M  M  L  E  A  S  R  *  N  A  R  Q  M  E  S  G  Y  K  *  N  Q  L  Q  M  L  I  L  S  M  L  V  T  *  F  R :   F  G  A  M  T  D  M  K  V  S  N  I  G  *  *  Q  A  P  T  K  R  D  S  P  F  H  F  S  S  T  R  L  T  M  *  W  L  S  L  W  K  S  L  R  M  K  K  V  Q  Q  N  T  R  L  T  T  G  E  N  F  S  L  Q  E  T  L  A  I  S  R  N  L  M  L  R  T  F  K  Y  I  T  L  E  M  V  T  C  N  D  K  C  S  V  W  E  V  L  L  R  C  Y  F  Q  L  E  G  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93772" stop="94286"/>
                    <exon start="94495" stop="94822"/>
                    <exon start="94892" stop="95155"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1104</number_coding_nucleotides>
                  <number_encoded_amino_acids>368</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSLVTKKKEEEESEISIMENMDESFFQETEHRPKQSTIEAEDIPIIDLSPILTSDSSEITNLVAQIGDACKKWGFFQVINHGVPSTCRQKIERASKEFFLLPTEEKRKVSRDEDNPMGFYDTEHTKNVRDWKEVFDFVVENPTLLPASHEPHDTELRELKNQWPDFPNNFREACEEYARGIEKLSYKLLELIALSLGLSSKRLNNYFKDQTSFMRLNYYPLCPIHHLALGVGRHKDPGALTVLAQDDVGGLEVKRKADGEWIQVKPTPDAYIINVGDIIQVWSNDRYESVEHRVIASSNKERFSVPFFFNPSHYVMVEPLEELTNEESPAKYKAYNWGKFFTTRNLSNFKKLNVENIQIYHFRNGDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="96277" PGL_stop="95541"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96277" e_stop="95541"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="96277" e_stop="95541" e_length="737"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96277" stop="95541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584240" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTGAAGAACAAGAAGAGATGCACAAAAAAGTCATTGTTATCAATTAGTTCCAAAGAACAAATTGATGTTAACAAAGTGGGCACACGCTCGTTGGGACGATTGGAGATTTTTCATTACCGCGATGGAATGTTTTGTTTGGCACTCTAAATGCCATACCAAAATCAATCTCCCTTATTACCGTTACTATATTACAATGACTGGAAAACAAAGCTGCACAAGTGTGTTCTTTCCCCTTCAACACATGAATATTATTCTGACTGATTGTTCAACTCAGTCACCTGTGTGTACAGATAAACAGGTTGCGAATACTTGCACTCTCCAGTTCAATCAAGTTATTTAGGTATCTCAGTGATATATTGTCACTACACAATATGAGAGACTCTCCTACTGGACTGTATTTCAATGTTTTTTTAGTTACAAGTGAATCAATATATGAGAGAATAGCTCCTGGTCTATCAAATTGTATAGATCATGCGAGAAAACATTTAAGGTACCTGTGACCACGTCTGGGGATGTCTCTGAATCTTGTCGACTGGCTAGCCTGTATATACAGTTTGGGTCCGCACTTGAACCAAACTCTCTAAGGTGCTGATGATGAACAGGCTGCTGACCCTGCAGGCTGTTACAACAATCTTCTTTAGAGAAAATTTGAGGTACTTACGACACTCACAAGGGACGGAAAAGTTGATGAAGCAGCGATTAGTCATTTGTTCAGGTATAAAGTTGACAGCAGAA</gDNA_template>
            <first_frame> D  *  R  T  R  R  D  A  Q  K  S  H  C  Y  Q  L  V  P  K  N  K  L  M  L  T  K  W  A  H  A  R  W  D  D  W  R  F  F  I  T  A  M  E  C  F  V  W  H  S  K  C  H  T  K  I  N  L  P  Y  Y  R  Y  Y  I  T  M  T  G  K  Q  S  C  T  S  V  F  F  P  L  Q  H  M  N  I  I  L  T  D  C  S  T  Q  S  P  V  C  T  D  K  Q  V  A  N  T  C  T  L  Q  F  N  Q  V  I  *  V  S  Q  *  Y  I  V  T  T  Q  Y  E  R  L  S  Y  W  T  V  F  Q  C  F  F  S  Y  K  *  I  N  I  *  E  N  S  S  W  S  I  K  L  Y  R  S  C  E  K  T  F  K  V  P  V  T  T  S  G  D  V  S  E  S  C  R  L  A  S  L  Y  I  Q  F  G  S  A  L  E  P  N  S  L  R  C  *  *  *  T  G  C  *  P  C  R  L  L  Q  Q  S  S  L  E  K  I  *  G  T  Y  D  T  H  K  G  R  K  S  *  *  S  S  D  *  S  F  V  Q  V  *  S  *  Q  Q   </first_frame>
            <second_frame>  T  E  E  Q  E  E  M  H  K  K  V  I  V  I  N  *  F  Q  R  T  N  *  C  *  Q  S  G  H  T  L  V  G  T  I  G  D  F  S  L  P  R  W  N  V  L  F  G  T  L  N  A  I  P  K  S  I  S  L  I  T  V  T  I  L  Q  *  L  E  N  K  A  A  Q  V  C  S  F  P  F  N  T  *  I  L  F  *  L  I  V  Q  L  S  H  L  C  V  Q  I  N  R  L  R  I  L  A  L  S  S  S  I  K  L  F  R  Y  L  S  D  I  L  S  L  H  N  M  R  D  S  P  T  G  L  Y  F  N  V  F  L  V  T  S  E  S  I  Y  E  R  I  A  P  G  L  S  N  C  I  D  H  A  R  K  H  L  R  Y  L  *  P  R  L  G  M  S  L  N  L  V  D  W  L  A  C  I  Y  S  L  G  P  H  L  N  Q  T  L  *  G  A  D  D  E  Q  A  A  D  P  A  G  C  Y  N  N  L  L  *  R  K  F  E  V  L  T  T  L  T  R  D  G  K  V  D  E  A  A  I  S  H  L  F  R  Y  K  V  D  S  R  </second_frame>
            <third_frame>   L  K  N  K  K  R  C  T  K  K  S  L  L  S  I  S  S  K  E  Q  I  D  V  N  K  V  G  T  R  S  L  G  R  L  E  I  F  H  Y  R  D  G  M  F  C  L  A  L  *  M  P  Y  Q  N  Q  S  P  L  L  P  L  L  Y  Y  N  D  W  K  T  K  L  H  K  C  V  L  S  P  S  T  H  E  Y  Y  S  D  *  L  F  N  S  V  T  C  V  Y  R  *  T  G  C  E  Y  L  H  S  P  V  Q  S  S  Y  L  G  I  S  V  I  Y  C  H  Y  T  I  *  E  T  L  L  L  D  C  I  S  M  F  F  *  L  Q  V  N  Q  Y  M  R  E  *  L  L  V  Y  Q  I  V  *  I  M  R  E  N  I  *  G  T  C  D  H  V  W  G  C  L  *  I  L  S  T  G  *  P  V  Y  T  V  W  V  R  T  *  T  K  L  S  K  V  L  M  M  N  R  L  L  T  L  Q  A  V  T  T  I  F  F  R  E  N  L  R  Y  L  R  H  S  Q  G  T  E  K  L  M  K  Q  R  L  V  I  C  S  G  I  K  L  T  A  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96271" stop="95936"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTRRDAQKSHCYQLVPKNKLMLTKWAHARWDDWRFFITAMECFVWHSKCHTKINLPYYRYYITMTGKQSCTSVFFPLQHMNIILTDCSTQSPVCTDKQVANTCTLQFNQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="103455" PGL_stop="103673"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103455" e_stop="103673"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103455" e_stop="103673" e_length="219"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103455" stop="103673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598321" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTGTCGCCTCCGTAAAGACAACAATTTCAAGTGTCGCGTCTGCCACTCTAGTTTTGCTGCTGGAGTGGATCTGGCTAAAGACAAGAAGAGAACCACTAATCGGTGGAAATACATGAAGGATGGATGATACACGAAGGAGGTGAAGGAATGAAGAAGTTACTTTCTATTTGTTTAGTCTAATGTATCATGTTAAATCAAGTCTTCTGCTACTTTCTCT</gDNA_template>
            <first_frame> L  C  R  L  R  K  D  N  N  F  K  C  R  V  C  H  S  S  F  A  A  G  V  D  L  A  K  D  K  K  R  T  T  N  R  W  K  Y  M  K  D  G  *  Y  T  K  E  V  K  E  *  R  S  Y  F  L  F  V  *  S  N  V  S  C  *  I  K  S  S  A  T  F  S </first_frame>
            <second_frame>  S  V  A  S  V  K  T  T  I  S  S  V  A  S  A  T  L  V  L  L  L  E  W  I  W  L  K  T  R  R  E  P  L  I  G  G  N  T  *  R  M  D  D  T  R  R  R  *  R  N  E  E  V  T  F  Y  L  F  S  L  M  Y  H  V  K  S  S  L  L  L  L  S   </second_frame>
            <third_frame>   L  S  P  P  *  R  Q  Q  F  Q  V  S  R  L  P  L  *  F  C  C  W  S  G  S  G  *  R  Q  E  E  N  H  *  S  V  E  I  H  E  G  W  M  I  H  E  G  G  E  G  M  K  K  L  L  S  I  C  L  V  *  C  I  M  L  N  Q  V  F  C  Y  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C01HBa0008L19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="110354" PGL_stop="111869"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110354" e_stop="110847"/>
            <exon e_start="111024" e_stop="111351"/>
            <exon e_start="111425" e_stop="111869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.914" e_score="0.998"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="110354" e_stop="110847" e_length="494"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.914">
            <gDNA_intron_boundary i_start="110848" i_stop="111023" i_length="176"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111024" e_stop="111351" e_length="328"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="111352" i_stop="111424" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111425" e_stop="111869" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110354" stop="110847"/>
              <exon start="111024" stop="111351"/>
              <exon start="111425" stop="111869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575358" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTAAGCAAATAATTGAGCAATGGTAGAAGTCCATCCAGCAATCATCCAAGATGTCGAACACAGGCCAGATCTCACCAAAAGTACTGAAGCAGAGGGCATTCCAGTGATTGATCTCTCAATACTGAATTCTCCAGACACATCGACTGACGCGGAGTTATCAAGTCTAGTTGGTGAAATAAGAAATGCATGCAAGGAGTGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCCTTAGAGTGCAGGGAAAAGATAGAATTGGCATCAAGAAAGTTCTTTGCTTTACCTAAAGAGGAAAAGATGAAAGTGAAAAGAAATGAGGTGAACTTCATTGGATATTATGATGCTGAGCTAACCAAAAAGATCAGGGACTGGAAAGAAGTCTTTGATTTTACTGTTGAGAAGACAGCTATGGTCCCACTTTCTCAAGATCCTAATGACAAGGACCTCAGGGACTTTCAGAACCAATGGCCTCAGTACCCTCCAGGATTAAG : GGAGGTGTGTGCAGAGTATATTCAAGAAATGCAAAAGTTGGCTAACAAGTTAGCAGAACTGATATCACTCAGCTTAAGCTTGCCAGCAAAAAGGCTGAATGAGTTCTTTGAAGACCAAATTGTTTTTGGAAGGATAAATCATTATCCTCCTTGTCCTGTCCCTCATCTGGCTTTAGGAGTTGGTAGACACAAAGATGCTGGTTTATTCACCATTTTGTGTCAAGATGATACCGGAGGGCTTGAAATAAAGAGGAAAACTGATGGAGAATGGATAGGAGTTAAACCTACTCCTGATGCATACATTGTAAATCTTGGTGACGCTACACAG : GTGTATAGCAATGATGAATATGAGAGTGTGGAACATCGCGTTGTGCTGAACACTGAAAGGAGTAGATATTCAATTCCTTTCTTTGTCAATCCATCGCATAGTACTTGGATACAACCCTTGGAGGAGAAGGTCAATGAGAAGAACCCTGCAAAGTATAAGCCCTATAACTGGGGAATGCTTTTCACTCATCGCAGAAAACACGATCCCAAGACGCGTGATGAGGAAAACCTTACACTTGATCATTTCATGGCTTGAAACAAATCAATTTTATGTTTATGTCTTCTTCAAGTAAATGTGTCATGTAATATAAATAATAACATCTTTATTAGTGTCTATGTCTACTTAATTTCCTATATGTGTAATCCCAGCAAAATGTGTCAATGTAATCGTTTTCATCCCATCTTATATTATAATGCTTAATGTGATCTTATCTTTGGCTTAACAT</gDNA_template>
            <first_frame> S  *  A  N  N  *  A  M  V  E  V  H  P  A  I  I  Q  D  V  E  H  R  P  D  L  T  K  S  T  E  A  E  G  I  P  V  I  D  L  S  I  L  N  S  P  D  T  S  T  D  A  E  L  S  S  L  V  G  E  I  R  N  A  C  K  E  W  G  F  F  Q  V  I  N  H  G  V  S  L  E  C  R  E  K  I  E  L  A  S  R  K  F  F  A  L  P  K  E  E  K  M  K  V  K  R  N  E  V  N  F  I  G  Y  Y  D  A  E  L  T  K  K  I  R  D  W  K  E  V  F  D  F  T  V  E  K  T  A  M  V  P  L  S  Q  D  P  N  D  K  D  L  R  D  F  Q  N  Q  W  P  Q  Y  P  P  G  L  R :   E  V  C  A  E  Y  I  Q  E  M  Q  K  L  A  N  K  L  A  E  L  I  S  L  S  L  S  L  P  A  K  R  L  N  E  F  F  E  D  Q  I  V  F  G  R  I  N  H  Y  P  P  C  P  V  P  H  L  A  L  G  V  G  R  H  K  D  A  G  L  F  T  I  L  C  Q  D  D  T  G  G  L  E  I  K  R  K  T  D  G  E  W  I  G  V  K  P  T  P  D  A  Y  I  V  N  L  G  D  A  T  Q  :  V  Y  S  N  D  E  Y  E  S  V  E  H  R  V  V  L  N  T  E  R  S  R  Y  S  I  P  F  F  V  N  P  S  H  S  T  W  I  Q  P  L  E  E  K  V  N  E  K  N  P  A  K  Y  K  P  Y  N  W  G  M  L  F  T  H  R  R  K  H  D  P  K  T  R  D  E  E  N  L  T  L  D  H  F  M  A  *  N  K  S  I  L  C  L  C  L  L  Q  V  N  V  S  C  N  I  N  N  N  I  F  I  S  V  Y  V  Y  L  I  S  Y  M  C  N  P  S  K  M  C  Q  C  N  R  F  H  P  I  L  Y  Y  N  A  *  C  D  L  I  F  G  L  T  </first_frame>
            <second_frame>  L  K  Q  I  I  E  Q  W  *  K  S  I  Q  Q  S  S  K  M  S  N  T  G  Q  I  S  P  K  V  L  K  Q  R  A  F  Q  *  L  I  S  Q  Y  *  I  L  Q  T  H  R  L  T  R  S  Y  Q  V  *  L  V  K  *  E  M  H  A  R  S  G  D  S  S  K  *  S  I  M  G  C  P  *  S  A  G  K  R  *  N  W  H  Q  E  S  S  L  L  Y  L  K  R  K  R  *  K  *  K  E  M  R  *  T  S  L  D  I  M  M  L  S  *  P  K  R  S  G  T  G  K  K  S  L  I  L  L  L  R  R  Q  L  W  S  H  F  L  K  I  L  M  T  R  T  S  G  T  F  R  T  N  G  L  S  T  L  Q  D  *   : G  R  C  V  Q  S  I  F  K  K  C  K  S  W  L  T  S  *  Q  N  *  Y  H  S  A  *  A  C  Q  Q  K  G  *  M  S  S  L  K  T  K  L  F  L  E  G  *  I  I  I  L  L  V  L  S  L  I  W  L  *  E  L  V  D  T  K  M  L  V  Y  S  P  F  C  V  K  M  I  P  E  G  L  K  *  R  G  K  L  M  E  N  G  *  E  L  N  L  L  L  M  H  T  L  *  I  L  V  T  L  H  R :   C  I  A  M  M  N  M  R  V  W  N  I  A  L  C  *  T  L  K  G  V  D  I  Q  F  L  S  L  S  I  H  R  I  V  L  G  Y  N  P  W  R  R  R  S  M  R  R  T  L  Q  S  I  S  P  I  T  G  E  C  F  S  L  I  A  E  N  T  I  P  R  R  V  M  R  K  T  L  H  L  I  I  S  W  L  E  T  N  Q  F  Y  V  Y  V  F  F  K  *  M  C  H  V  I  *  I  I  T  S  L  L  V  S  M  S  T  *  F  P  I  C  V  I  P  A  K  C  V  N  V  I  V  F  I  P  S  Y  I  I  M  L  N  V  I  L  S  L  A  *  H </second_frame>
            <third_frame>   L  S  K  *  L  S  N  G  R  S  P  S  S  N  H  P  R  C  R  T  Q  A  R  S  H  Q  K  Y  *  S  R  G  H  S  S  D  *  S  L  N  T  E  F  S  R  H  I  D  *  R  G  V  I  K  S  S  W  *  N  K  K  C  M  Q  G  V  G  I  L  P  S  D  Q  S  W  G  V  L  R  V  Q  G  K  D  R  I  G  I  K  K  V  L  C  F  T  *  R  G  K  D  E  S  E  K  K  *  G  E  L  H  W  I  L  *  C  *  A  N  Q  K  D  Q  G  L  E  R  S  L  *  F  Y  C  *  E  D  S  Y  G  P  T  F  S  R  S  *  *  Q  G  P  Q  G  L  S  E  P  M  A  S  V  P  S  R  I  K  :  G  G  V  C  R  V  Y  S  R  N  A  K  V  G  *  Q  V  S  R  T  D  I  T  Q  L  K  L  A  S  K  K  A  E  *  V  L  *  R  P  N  C  F  W  K  D  K  S  L  S  S  L  S  C  P  S  S  G  F  R  S  W  *  T  Q  R  C  W  F  I  H  H  F  V  S  R  *  Y  R  R  A  *  N  K  E  E  N  *  W  R  M  D  R  S  *  T  Y  S  *  C  I  H  C  K  S  W  *  R  Y  T   : G  V  *  Q  *  *  I  *  E  C  G  T  S  R  C  A  E  H  *  K  E  *  I  F  N  S  F  L  C  Q  S  I  A  *  Y  L  D  T  T  L  G  G  E  G  Q  *  E  E  P  C  K  V  *  A  L  *  L  G  N  A  F  H  S  S  Q  K  T  R  S  Q  D  A  *  *  G  K  P  Y  T  *  S  F  H  G  L  K  Q  I  N  F  M  F  M  S  S  S  S  K  C  V  M  *  Y  K  *  *  H  L  Y  *  C  L  C  L  L  N  F  L  Y  V  *  S  Q  Q  N  V  S  M  *  S  F  S  S  H  L  I  L  *  C  L  M  *  S  Y  L  W  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110372" stop="110847"/>
                    <exon start="111024" stop="111351"/>
                    <exon start="111425" stop="111679"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1056</number_coding_nucleotides>
                  <number_encoded_amino_acids>352</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMVEVHPAIIQDVEHRPDLTKSTEAEGIPVIDLSILNSPDTSTDAELSSLVGEIRNACKEWGFFQVINHGVSLECREKIELASRKFFALPKEEKMKVKRNEVNFIGYYDAELTKKIRDWKEVFDFTVEKTAMVPLSQDPNDKDLRDFQNQWPQYPPGLREVCAEYIQEMQKLANKLAELISLSLSLPAKRLNEFFEDQIVFGRINHYPPCPVPHLALGVGRHKDAGLFTILCQDDTGGLEIKRKTDGEWIGVKPTPDAYIVNLGDATQVYSNDEYESVEHRVVLNTERSRYSIPFFVNPSHSTWIQPLEEKVNEKNPAKYKPYNWGMLFTHRRKHDPKTRDEENLTLDHFMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="112518" PGL_stop="113971"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112518" e_stop="113971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="112518" e_stop="113971" e_length="1454"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112518" stop="113971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGAACACAATGAATTTGAACACATTTGTGTGTTTCTTTTTACTCTTTTCGAATGTTGTGTCTGTTTACTCTCAGGGCAGTGCTGCTACAGATGCTGCAGTGATGCAAGAATTCAAGAAACAAATAATAAATCCTAATCCACTTAACTGGAACGATCCAGATCCGTGTAAATGGGATAAAGTTCAATGTAGTAAGGATGGTCGCGTAATTAGGATTCAAGTAGGGGATCAAGGCCTAAAAGGAACTCTCCCATCAAACATTAATACCCTTACTGAATTGCAAGTTTTTGAAGTTCAAAGAAATACATTCACTGGTCCGCTCCCGAGTTTTTCTGGATTAAACTCATTGCAGACCATTCTTCTTAATGGCAATGGGTTCACTTCAATTCCTAATGAATTTTTTCAAGGTATGACTAATTTGCAAAGTGTTTACTTGGATTCAAATCCCTTTTCATCATGGACTGTACCAGAAAGCCTGAAAAGTGCGACTGCTCTTCAAATATTCTCCGCTTATTCTGCTAATATTACTGGTAAAATCCCTGATTTATTTGGTGGAAATACATTCTCTAGTTTAACAACTTTGCATTTGTCCTTTAATAATTTGGAGGGTCCTCTGCCCTCGAGCTTTTCGGGTTCTTCTATCCAATCGTTGTGGTTAAATAGTATTAGAGGTAAGTTAAATGGCTCAATAGATGTGATACAGAACATGACCAGATTAACCCAACTCTGGTTTTCAGGCAATCAGTTTACAGGCCCTTTGCCTGATTTTTCGGGGTTAACTCAGCTGGAAGATTGTAATTTGAGAGATAATAGCTTCACTGGTCTAGTCCCAGACTCTTTGGTCAATCTTCCTTCATTAAAAGTGGTTAATTTGACAAACAACATTTTGCAAGGGCCTACGCCACAATTTCCATCTTCAGTGCGAGTGGATATGTTGGATAATACCAATAGTTTTTGTTTGTCACAACCTGGTCCTTGTGACTCGCGGGTTAGTACACTGTTGGATGTGCTTAAGGACGTAAGGTATCCCACGAAGTTTGCTGAGAATTGGAAAGGGAATGATCCGTGTTCGCGTTGGCTTGGCATAACTTGCGATGGTGAAAACATTACAGTACTCAATTTTCAGAAAAGTGGACTTACTGGGATCATCTCTTCAAACTTGTCGTCTATTACGTCAATACAGAGGCTGATCCTAGCAGACAATTCTCTTACAGGGACTATCCCAAATGAGCTCACATTGCTGCCAAAATTAACGGAATTGGATGTTTCTAACAATCAACTGTATGGAAAAATCCCACAATTTAAGAGCAGTGTAGTGGTTAAAACTGAAGGCAACGTCAATATTGGGAAAGATAAGCCACCTACATCTGCACCTTGAACGCGTTCTGATAAATGTATTAGCAAATGTAATAATCTATAAGAAGATTTGTACTATATATTAAGCTATTTAGAT</gDNA_template>
            <first_frame> C  *  T  Q  *  I  *  T  H  L  C  V  S  F  Y  S  F  R  M  L  C  L  F  T  L  R  A  V  L  L  Q  M  L  Q  *  C  K  N  S  R  N  K  *  *  I  L  I  H  L  T  G  T  I  Q  I  R  V  N  G  I  K  F  N  V  V  R  M  V  A  *  L  G  F  K  *  G  I  K  A  *  K  E  L  S  H  Q  T  L  I  P  L  L  N  C  K  F  L  K  F  K  E  I  H  S  L  V  R  S  R  V  F  L  D  *  T  H  C  R  P  F  F  L  M  A  M  G  S  L  Q  F  L  M  N  F  F  K  V  *  L  I  C  K  V  F  T  W  I  Q  I  P  F  H  H  G  L  Y  Q  K  A  *  K  V  R  L  L  F  K  Y  S  P  L  I  L  L  I  L  L  V  K  S  L  I  Y  L  V  E  I  H  S  L  V  *  Q  L  C  I  C  P  L  I  I  W  R  V  L  C  P  R  A  F  R  V  L  L  S  N  R  C  G  *  I  V  L  E  V  S  *  M  A  Q  *  M  *  Y  R  T  *  P  D  *  P  N  S  G  F  Q  A  I  S  L  Q  A  L  C  L  I  F  R  G  *  L  S  W  K  I  V  I  *  E  I  I  A  S  L  V  *  S  Q  T  L  W  S  I  F  L  H  *  K  W  L  I  *  Q  T  T  F  C  K  G  L  R  H  N  F  H  L  Q  C  E  W  I  C  W  I  I  P  I  V  F  V  C  H  N  L  V  L  V  T  R  G  L  V  H  C  W  M  C  L  R  T  *  G  I  P  R  S  L  L  R  I  G  K  G  M  I  R  V  R  V  G  L  A  *  L  A  M  V  K  T  L  Q  Y  S  I  F  R  K  V  D  L  L  G  S  S  L  Q  T  C  R  L  L  R  Q  Y  R  G  *  S  *  Q  T  I  L  L  Q  G  L  S  Q  M  S  S  H  C  C  Q  N  *  R  N  W  M  F  L  T  I  N  C  M  E  K  S  H  N  L  R  A  V  *  W  L  K  L  K  A  T  S  I  L  G  K  I  S  H  L  H  L  H  L  E  R  V  L  I  N  V  L  A  N  V  I  I  Y  K  K  I  C  T  I  Y  *  A  I  *   </first_frame>
            <second_frame>  V  E  H  N  E  F  E  H  I  C  V  F  L  F  T  L  F  E  C  C  V  C  L  L  S  G  Q  C  C  Y  R  C  C  S  D  A  R  I  Q  E  T  N  N  K  S  *  S  T  *  L  E  R  S  R  S  V  *  M  G  *  S  S  M  *  *  G  W  S  R  N  *  D  S  S  R  G  S  R  P  K  R  N  S  P  I  K  H  *  Y  P  Y  *  I  A  S  F  *  S  S  K  K  Y  I  H  W  S  A  P  E  F  F  W  I  K  L  I  A  D  H  S  S  *  W  Q  W  V  H  F  N  S  *  *  I  F  S  R  Y  D  *  F  A  K  C  L  L  G  F  K  S  L  F  I  M  D  C  T  R  K  P  E  K  C  D  C  S  S  N  I  L  R  L  F  C  *  Y  Y  W  *  N  P  *  F  I  W  W  K  Y  I  L  *  F  N  N  F  A  F  V  L  *  *  F  G  G  S  S  A  L  E  L  F  G  F  F  Y  P  I  V  V  V  K  *  Y  *  R  *  V  K  W  L  N  R  C  D  T  E  H  D  Q  I  N  P  T  L  V  F  R  Q  S  V  Y  R  P  F  A  *  F  F  G  V  N  S  A  G  R  L  *  F  E  R  *  *  L  H  W  S  S  P  R  L  F  G  Q  S  S  F  I  K  S  G  *  F  D  K  Q  H  F  A  R  A  Y  A  T  I  S  I  F  S  A  S  G  Y  V  G  *  Y  Q  *  F  L  F  V  T  T  W  S  L  *  L  A  G  *  Y  T  V  G  C  A  *  G  R  K  V  S  H  E  V  C  *  E  L  E  R  E  *  S  V  F  A  L  A  W  H  N  L  R  W  *  K  H  Y  S  T  Q  F  S  E  K  W  T  Y  W  D  H  L  F  K  L  V  V  Y  Y  V  N  T  E  A  D  P  S  R  Q  F  S  Y  R  D  Y  P  K  *  A  H  I  A  A  K  I  N  G  I  G  C  F  *  Q  S  T  V  W  K  N  P  T  I  *  E  Q  C  S  G  *  N  *  R  Q  R  Q  Y  W  E  R  *  A  T  Y  I  C  T  L  N  A  F  *  *  M  Y  *  Q  M  *  *  S  I  R  R  F  V  L  Y  I  K  L  F  R  </second_frame>
            <third_frame>   L  N  T  M  N  L  N  T  F  V  C  F  F  L  L  F  S  N  V  V  S  V  Y  S  Q  G  S  A  A  T  D  A  A  V  M  Q  E  F  K  K  Q  I  I  N  P  N  P  L  N  W  N  D  P  D  P  C  K  W  D  K  V  Q  C  S  K  D  G  R  V  I  R  I  Q  V  G  D  Q  G  L  K  G  T  L  P  S  N  I  N  T  L  T  E  L  Q  V  F  E  V  Q  R  N  T  F  T  G  P  L  P  S  F  S  G  L  N  S  L  Q  T  I  L  L  N  G  N  G  F  T  S  I  P  N  E  F  F  Q  G  M  T  N  L  Q  S  V  Y  L  D  S  N  P  F  S  S  W  T  V  P  E  S  L  K  S  A  T  A  L  Q  I  F  S  A  Y  S  A  N  I  T  G  K  I  P  D  L  F  G  G  N  T  F  S  S  L  T  T  L  H  L  S  F  N  N  L  E  G  P  L  P  S  S  F  S  G  S  S  I  Q  S  L  W  L  N  S  I  R  G  K  L  N  G  S  I  D  V  I  Q  N  M  T  R  L  T  Q  L  W  F  S  G  N  Q  F  T  G  P  L  P  D  F  S  G  L  T  Q  L  E  D  C  N  L  R  D  N  S  F  T  G  L  V  P  D  S  L  V  N  L  P  S  L  K  V  V  N  L  T  N  N  I  L  Q  G  P  T  P  Q  F  P  S  S  V  R  V  D  M  L  D  N  T  N  S  F  C  L  S  Q  P  G  P  C  D  S  R  V  S  T  L  L  D  V  L  K  D  V  R  Y  P  T  K  F  A  E  N  W  K  G  N  D  P  C  S  R  W  L  G  I  T  C  D  G  E  N  I  T  V  L  N  F  Q  K  S  G  L  T  G  I  I  S  S  N  L  S  S  I  T  S  I  Q  R  L  I  L  A  D  N  S  L  T  G  T  I  P  N  E  L  T  L  L  P  K  L  T  E  L  D  V  S  N  N  Q  L  Y  G  K  I  P  Q  F  K  S  S  V  V  V  K  T  E  G  N  V  N  I  G  K  D  K  P  P  T  S  A  P  *  T  R  S  D  K  C  I  S  K  C  N  N  L  *  E  D  L  Y  Y  I  L  S  Y  L  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112520" stop="113896"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1374</number_coding_nucleotides>
                  <number_encoded_amino_acids>458</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNTMNLNTFVCFFLLFSNVVSVYSQGSAATDAAVMQEFKKQIINPNPLNWNDPDPCKWDKVQCSKDGRVIRIQVGDQGLKGTLPSNINTLTELQVFEVQRNTFTGPLPSFSGLNSLQTILLNGNGFTSIPNEFFQGMTNLQSVYLDSNPFSSWTVPESLKSATALQIFSAYSANITGKIPDLFGGNTFSSLTTLHLSFNNLEGPLPSSFSGSSIQSLWLNSIRGKLNGSIDVIQNMTRLTQLWFSGNQFTGPLPDFSGLTQLEDCNLRDNSFTGLVPDSLVNLPSLKVVNLTNNILQGPTPQFPSSVRVDMLDNTNSFCLSQPGPCDSRVSTLLDVLKDVRYPTKFAENWKGNDPCSRWLGITCDGENITVLNFQKSGLTGIISSNLSSITSIQRLILADNSLTGTIPNELTLLPKLTELDVSNNQLYGKIPQFKSSVVVKTEGNVNIGKDKPPTSAP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="122185" PGL_stop="122842"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122185" e_stop="122842"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="122185" e_stop="122842" e_length="658"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122185" stop="122842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601231" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGTCGTTACAAAAGTTGATCCTAGCAAATAATTTTCTTACTGGAACTATTCCGAATGAGCTCGTTTCGCTGCCAAACCTAAAGGAATTTGATATTTCTAACAATCTAATTTATGGGAAAATCCCACCATTTAAGAGCAATGTATTGGTTAAATATGATGGCAATGTCAATATTGGGAAAGATAATCCACCTCCTTTTGCACCTTCCGGGAGCACTCCTAGTTCACCCGATGGAGGTGGACAAACTCATGGGAATGGTAATAAAAAATCTTCAACTGGAGTTGTTGTGGGCTCAGTGATAGGTGGTGTTTGTGGTGCCGTTGCGATTGCTGGATTATTTGTGTTTTGTCTTTACAGGACTAAGCGTATGCGGTCCGGTAGAGTTCAGAGTCCACACACAGTTGTTATTCATCCTCATCATTCAGGATCTGACCAAGATGCTGTTAAGATCACAGTTGCTGGTTCAAGTGTCAATGGAGGGACAACTGAAACGCACAGTTGTGGAAGCAGTGCACCTGGGGACTTGCACATTGTTGAGGCTGGTAACATGGTGATTTCCATCCAAGTTTTGAGGAATGTCACGAACAACTTCAGCGAGGAGAATATATTGGGGAGAGGTGGATTTGGAACTGTTTACAAGGGGGAGTTGCATGATGGAAC</gDNA_template>
            <first_frame> R  R  Y  K  S  *  S  *  Q  I  I  F  L  L  E  L  F  R  M  S  S  F  R  C  Q  T  *  R  N  L  I  F  L  T  I  *  F  M  G  K  S  H  H  L  R  A  M  Y  W  L  N  M  M  A  M  S  I  L  G  K  I  I  H  L  L  L  H  L  P  G  A  L  L  V  H  P  M  E  V  D  K  L  M  G  M  V  I  K  N  L  Q  L  E  L  L  W  A  Q  *  *  V  V  F  V  V  P  L  R  L  L  D  Y  L  C  F  V  F  T  G  L  S  V  C  G  P  V  E  F  R  V  H  T  Q  L  L  F  I  L  I  I  Q  D  L  T  K  M  L  L  R  S  Q  L  L  V  Q  V  S  M  E  G  Q  L  K  R  T  V  V  E  A  V  H  L  G  T  C  T  L  L  R  L  V  T  W  *  F  P  S  K  F  *  G  M  S  R  T  T  S  A  R  R  I  Y  W  G  E  V  D  L  E  L  F  T  R  G  S  C  M  M  E  </first_frame>
            <second_frame>  V  V  T  K  V  D  P  S  K  *  F  S  Y  W  N  Y  S  E  *  A  R  F  A  A  K  P  K  G  I  *  Y  F  *  Q  S  N  L  W  E  N  P  T  I  *  E  Q  C  I  G  *  I  *  W  Q  C  Q  Y  W  E  R  *  S  T  S  F  C  T  F  R  E  H  S  *  F  T  R  W  R  W  T  N  S  W  E  W  *  *  K  I  F  N  W  S  C  C  G  L  S  D  R  W  C  L  W  C  R  C  D  C  W  I  I  C  V  L  S  L  Q  D  *  A  Y  A  V  R  *  S  S  E  S  T  H  S  C  Y  S  S  S  S  F  R  I  *  P  R  C  C  *  D  H  S  C  W  F  K  C  Q  W  R  D  N  *  N  A  Q  L  W  K  Q  C  T  W  G  L  A  H  C  *  G  W  *  H  G  D  F  H  P  S  F  E  E  C  H  E  Q  L  Q  R  G  E  Y  I  G  E  R  W  I  W  N  C  L  Q  G  G  V  A  *  W  N </second_frame>
            <third_frame>   S  L  Q  K  L  I  L  A  N  N  F  L  T  G  T  I  P  N  E  L  V  S  L  P  N  L  K  E  F  D  I  S  N  N  L  I  Y  G  K  I  P  P  F  K  S  N  V  L  V  K  Y  D  G  N  V  N  I  G  K  D  N  P  P  P  F  A  P  S  G  S  T  P  S  S  P  D  G  G  G  Q  T  H  G  N  G  N  K  K  S  S  T  G  V  V  V  G  S  V  I  G  G  V  C  G  A  V  A  I  A  G  L  F  V  F  C  L  Y  R  T  K  R  M  R  S  G  R  V  Q  S  P  H  T  V  V  I  H  P  H  H  S  G  S  D  Q  D  A  V  K  I  T  V  A  G  S  S  V  N  G  G  T  T  E  T  H  S  C  G  S  S  A  P  G  D  L  H  I  V  E  A  G  N  M  V  I  S  I  Q  V  L  R  N  V  T  N  N  F  S  E  E  N  I  L  G  R  G  G  F  G  T  V  Y  K  G  E  L  H  D  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122187" stop="122840"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLQKLILANNFLTGTIPNELVSLPNLKEFDISNNLIYGKIPPFKSNVLVKYDGNVNIGKDNPPPFAPSGSTPSSPDGGGQTHGNGNKKSSTGVVVGSVIGGVCGAVAIAGLFVFCLYRTKRMRSGRVQSPHTVVIHPHHSGSDQDAVKITVAGSSVNGGTTETHSCGSSAPGDLHIVEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="123061" PGL_stop="124392"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123061" e_stop="123306"/>
            <exon e_start="124249" e_stop="124392"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="123061" e_stop="123306" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="123307" i_stop="124248" i_length="942"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="124249" e_stop="124392" e_length="144"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123061" stop="123306"/>
              <exon start="124249" stop="124392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCCCCTCGAATGGACAAGGAGGCTAATCATTGCACTTGATGTTGCAAGGGGTGTTGAATATCTTCATGGTTTAGCTCAACAGAGCTTCATTCATAGAGATCTGAAGCCATCTAACATTCTTTTGGGAGATGATATGAGGGCTAAAGTTGCAGATTTTGGACTTGTTCGCCTTGCTCCTGAGGGAAAAACTTCATTGGTTACTAGGTTGGCTGGAACTTTTGGCTATCTTGCACCAGAGTATGCAG : TTACGGGCCGAGTAACCACAAAGATTGATGTGTTTAGCTTTGGTGTAATCTTGATGGAGCTAATTACTGGAAGAAGAGCTCTGGATGAATCTCAGCCCGAGGAGAGCATGCATCTGGTCCCATGGTTCCGCAGAATGCATATAA</gDNA_template>
            <first_frame> S  P  S  N  G  Q  G  G  *  S  L  H  L  M  L  Q  G  V  L  N  I  F  M  V  *  L  N  R  A  S  F  I  E  I  *  S  H  L  T  F  F  W  E  M  I  *  G  L  K  L  Q  I  L  D  L  F  A  L  L  L  R  E  K  L  H  W  L  L  G  W  L  E  L  L  A  I  L  H  Q  S  M  Q  :  L  R  A  E  *  P  Q  R  L  M  C  L  A  L  V  *  S  *  W  S  *  L  L  E  E  E  L  W  M  N  L  S  P  R  R  A  C  I  W  S  H  G  S  A  E  C  I  * </first_frame>
            <second_frame>  A  P  R  M  D  K  E  A  N  H  C  T  *  C  C  K  G  C  *  I  S  S  W  F  S  S  T  E  L  H  S  *  R  S  E  A  I  *  H  S  F  G  R  *  Y  E  G  *  S  C  R  F  W  T  C  S  P  C  S  *  G  K  N  F  I  G  Y  *  V  G  W  N  F  W  L  S  C  T  R  V  C  S :   Y  G  P  S  N  H  K  D  *  C  V  *  L  W  C  N  L  D  G  A  N  Y  W  K  K  S  S  G  *  I  S  A  R  G  E  H  A  S  G  P  M  V  P  Q  N  A  Y   </second_frame>
            <third_frame>   P  L  E  W  T  R  R  L  I  I  A  L  D  V  A  R  G  V  E  Y  L  H  G  L  A  Q  Q  S  F  I  H  R  D  L  K  P  S  N  I  L  L  G  D  D  M  R  A  K  V  A  D  F  G  L  V  R  L  A  P  E  G  K  T  S  L  V  T  R  L  A  G  T  F  G  Y  L  A  P  E  Y  A   : V  T  G  R  V  T  T  K  I  D  V  F  S  F  G  V  I  L  M  E  L  I  T  G  R  R  A  L  D  E  S  Q  P  E  E  S  M  H  L  V  P  W  F  R  R  M  H  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123063" stop="123306"/>
                    <exon start="124249" stop="124391"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLEWTRRLIIALDVARGVEYLHGLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKTSLVTRLAGTFGYLAPEYAVTGRVTTKIDVFSFGVILMELITGRRALDESQPEESMHLVPWFRRMHI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="124920" PGL_stop="124351"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124920" e_stop="124351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="124920" e_stop="124351" e_length="570"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124920" stop="124351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATATTGTCACTAAAAATCTTTTAACAAAACCTGTAAGAAACCGAGACGGGGAGAAAAAGAAGGCAAAGATGGATGAGCACAAGGAATGAACAAACCAACCCTTTAAAGGGCAATACACCACCAGTATAGTTGGACAATCAAATTATCGTCCATCCACTGACGTAAATGAATCGGCGAATCCAGATGGCCGAGTGGGTATACTTGTTTGTGTATTTTCACTGCTTCCAATATATGAAGAAGAGCCGTCAATGCCACTCATTCCCTCGAGAGCCTGCCACTTCTTAACTGCTTGAGGTAGCGTCATGTCATAATCGATACCATATATTTCATCCTCGTCCACTTCTGCTGGCTTCCAGAGCTCAGCCAGGGAGGAAAGCACGTTGACAGCATGACCCATGTCTGGTCTCTGATGGGGTTCCCTAGCACAGCAGTGACCAGCCAACTCAGCAACTTTGCTGACACTGGCCAGAGTATCTTCATCAAGATCGATTGTGTGGTCAATGGCCTTACGGAATGTCTCCTTATTTATATGCATTCTGCGGAACCATGGGACCAGATGCATGCTCT</gDNA_template>
            <first_frame> F  I  L  S  L  K  I  F  *  Q  N  L  *  E  T  E  T  G  R  K  R  R  Q  R  W  M  S  T  R  N  E  Q  T  N  P  L  K  G  N  T  P  P  V  *  L  D  N  Q  I  I  V  H  P  L  T  *  M  N  R  R  I  Q  M  A  E  W  V  Y  L  F  V  Y  F  H  C  F  Q  Y  M  K  K  S  R  Q  C  H  S  F  P  R  E  P  A  T  S  *  L  L  E  V  A  S  C  H  N  R  Y  H  I  F  H  P  R  P  L  L  L  A  S  R  A  Q  P  G  R  K  A  R  *  Q  H  D  P  C  L  V  S  D  G  V  P  *  H  S  S  D  Q  P  T  Q  Q  L  C  *  H  W  P  E  Y  L  H  Q  D  R  L  C  G  Q  W  P  Y  G  M  S  P  Y  L  Y  A  F  C  G  T  M  G  P  D  A  C  S </first_frame>
            <second_frame>  S  Y  C  H  *  K  S  F  N  K  T  C  K  K  P  R  R  G  E  K  E  G  K  D  G  *  A  Q  G  M  N  K  P  T  L  *  R  A  I  H  H  Q  Y  S  W  T  I  K  L  S  S  I  H  *  R  K  *  I  G  E  S  R  W  P  S  G  Y  T  C  L  C  I  F  T  A  S  N  I  *  R  R  A  V  N  A  T  H  S  L  E  S  L  P  L  L  N  C  L  R  *  R  H  V  I  I  D  T  I  Y  F  I  L  V  H  F  C  W  L  P  E  L  S  Q  G  G  K  H  V  D  S  M  T  H  V  W  S  L  M  G  F  P  S  T  A  V  T  S  Q  L  S  N  F  A  D  T  G  Q  S  I  F  I  K  I  D  C  V  V  N  G  L  T  E  C  L  L  I  Y  M  H  S  A  E  P  W  D  Q  M  H  A   </second_frame>
            <third_frame>   H  I  V  T  K  N  L  L  T  K  P  V  R  N  R  D  G  E  K  K  K  A  K  M  D  E  H  K  E  *  T  N  Q  P  F  K  G  Q  Y  T  T  S  I  V  G  Q  S  N  Y  R  P  S  T  D  V  N  E  S  A  N  P  D  G  R  V  G  I  L  V  C  V  F  S  L  L  P  I  Y  E  E  E  P  S  M  P  L  I  P  S  R  A  C  H  F  L  T  A  *  G  S  V  M  S  *  S  I  P  Y  I  S  S  S  S  T  S  A  G  F  Q  S  S  A  R  E  E  S  T  L  T  A  *  P  M  S  G  L  *  W  G  S  L  A  Q  Q  *  P  A  N  S  A  T  L  L  T  L  A  R  V  S  S  S  R  S  I  V  W  S  M  A  L  R  N  V  S  L  F  I  C  I  L  R  N  H  G  T  R  C  M  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124619" stop="124353"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHVIIDTIYFILVHFCWLPELSQGGKHVDSMTHVWSLMGFPSTAVTSQLSNFADTGQSIFIKIDCVVNGLTECLLIYMHSAEPWDQMHA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C01HBa0008L19.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124828" stop="124625"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNQPFKGQYTTSIVGQSNYRPSTDVNESANPDGRVGILVCVFSLLPIYEEEPSMPLIPSRACHFLTA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="130955" PGL_stop="130536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="130955" e_stop="130536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="130955" e_stop="130536" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130955" stop="130536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGTTGTAGATAACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATATACAGTAAAAAAAATAGTTTAATTTTTTTACTTTAAACTAAGGAATGAAAGAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAATATTAAAATATACGTTGAACTTTGATAGAAGAATCATATATATCCCTAAATAATTTTAAAAAAAAATTAGAAGTAATAAATATAAATTTAAAATTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGTCATTTTATAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGTAAGGGCATATATGAGCCACTTTTATAACGAGGGATGTATAAGCTCTAAATGACAAAGTTGAGGG</gDNA_template>
            <first_frame> L  V  V  D  N  Q  I  F  S  S  N  T  K  L  N  Y  N  I  Q  *  K  K  *  F  N  F  F  T  L  N  *  G  M  K  E  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  Y  *  N  I  R  *  T  L  I  E  E  S  Y  I  S  L  N  N  F  K  K  K  L  E  V  I  N  I  N  L  K  L  I  F  *  L  P  L  N  E  G  Y  M  *  V  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  V  R  A  Y  M  S  H  F  Y  N  E  G  C  I  S  S  K  *  Q  S  *  G </first_frame>
            <second_frame>  L  L  *  I  T  K  F  F  L  R  I  R  N  *  I  T  I  Y  S  K  K  N  S  L  I  F  L  L  *  T  K  E  *  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  N  I  K  I  Y  V  E  L  *  *  K  N  H  I  Y  P  *  I  I  L  K  K  N  *  K  *  *  I  *  I  *  N  *  F  F  N  F  R  *  M  K  G  I  C  E  S  F  Y  N  G  R  G  I  C  E  P  F  V  *  R  *  G  H  I  *  A  T  F  I  T  R  D  V  *  A  L  N  D  K  V  E   </second_frame>
            <third_frame>   C  C  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  V  K  K  I  V  *  F  F  Y  F  K  L  R  N  E  R  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  I  L  K  Y  T  L  N  F  D  R  R  I  I  Y  I  P  K  *  F  *  K  K  I  R  S  N  K  Y  K  F  K  I  N  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  I  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  Y  E  P  L  L  *  R  G  M  Y  K  L  *  M  T  K  L  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C01HBa0008L19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 47 chains have been computed
$ 
$ memory statistics:
$ 53600 bytes spliced alignments in total
$ 26 spliced alignments have been stored
$ 2061 bytes was the average size of a spliced alignment
$ 30088 bytes predicted gene locations in total
$ 21 predicted gene locations have been stored
$ 1432 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 52 backtrace matrices have been allocated
$ 
$ date finished: 2009-10-07 23:22:38
-->
