GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 17:44:30 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 34829 Total sequence length: 35392868 Minimum sequence length: 63 Maximum sequence length: 5381 Length distribution (number of sequences of specified length): < 100: 4 < 200: 53 < 300: 143 < 400: 353 < 500: 791 < 600: 1674 < 700: 2583 < 800: 4023 < 900: 6481 < 1000: 5706 >=1000: 13018 Input file : /tmp/bac-submission-temp-ErUvv/C01HBa0163B20/C01HBa0163B20.seq.screen ________________________________________________________________________________ Sequence 1: C01HBa0163B20.1, from 1 to 134102, both strands analyzed. ... started at: Mon Aug 28 17:53:53 2006 EST library file: /tmp/cxgn-bacpublish-resources-L1Mr0E/lycopersicum_combined_unigene_seqs; matching gDNA +strand ... ... found all matches, elapsed seconds = 3 ... matches indexed, elapsed seconds = 3 HitsTableSize = 37 EST library file: /tmp/cxgn-bacpublish-resources-L1Mr0E/lycopersicum_combined_unigene_seqs; matching gDNA -strand ... ... found all matches, elapsed seconds = 3 ... matches indexed, elapsed seconds = 3 HitsTableSize = 22 ******************************************************************************** EST sequence 43 +strand 800 n (File: SGN-U345415+) 1 AAAAGCTGGA GCTCCACCGC GGTGGCGGCC GCTCTAGAAC TAGTGGATCC CCCGGGCTGC 61 AGGGAACTCA TAATGCTCAT ACCTGGTCCG AAAAGCAGTC TTGGGCACAT CTGCTGCTCG 121 TATTTTCAAT TGATGATAAC CAGATCTCAA GTCGATTTTT GAGAAGGTAC AAGCACCTTG 181 TAACTGATCG AACAAATCAT CAATGTGAGG AAGATATTTT CGAAAATTCT CTCACTATGG 241 TGATTGACTC AATTGGAGGA ATATCGGACT CAAGATCTTT GACTCTTACA ATATGGTAAA 301 TTCACACTTT TGAGATTATT TTGCAATATT TTAAACAAGA GATGATATGA CCTTTAGGAA 361 TTAAATTACT GCCATTCCAC TCTAAGACAG GTTCATTAGG AAAGTTGAAT TTAACAACTC 421 TTGTTCGACA GTCTATGGAA GCATAACAAG CATGCAACCA ATCCATTCCC AAGATAAAAT 481 AAAAATCGAC CATATCGAAT TCCACCAAAT CCACCCAAGT AACTCTATTG GGGAAATATA 541 TAGGATAACT CCTAAAGACT CTTCTAGCAA CAATGGAGTC ACCTACCGGG GTTGTAACAA 601 AAAATATTTT CTCAAAGGCC TGGCGTCGAA TATGAAGAGA CATACTCACC CGTTATGGAT 661 GCAATAACAT TGGTTTATCT CATTAGTTTC ACAGTCCATG AGCAACTTGA AATGCATTTG 721 ATGGATGTGG TTACAACCTA CCTTTATGGA TCATTTAAAT ATGAGATATA CATGAAAATT 781 CCTGAAGGAT TTGCGATTGC Predicted gene structure (within gDNA segment 11504 to 3279): Exon 1 10768 10761 ( 8 n); cDNA 489 496 ( 8 n); score: 0.875 Intron 1 10760 9906 ( 855 n); Pd: 0.000 (s: 0), Pa: 0.739 (s: 0) Exon 2 9905 9881 ( 25 n); cDNA 497 521 ( 25 n); score: 0.560 Intron 2 9880 5882 (3999 n); Pd: 0.810 (s: 0), Pa: 0.810 (s: 0.52) Exon 3 5881 5831 ( 51 n); cDNA 522 571 ( 50 n); score: 0.529 Intron 3 5830 5410 ( 421 n); Pd: 0.000 (s: 0.54), Pa: 0.172 (s: 0) Exon 4 5409 5396 ( 14 n); cDNA 572 585 ( 14 n); score: 0.643 Intron 4 5395 4274 (1122 n); Pd: 0.191 (s: 0), Pa: 0.000 (s: 0.77) Exon 5 4273 4063 ( 211 n); cDNA 586 797 ( 212 n); score: 0.893 MATCH C01HBa0163B20.1- SGN-U345415+ 0.823 309 0.386 C PGS_C01HBa0163B20.1-_SGN-U345415+ (10768 10761,9905 9881,5881 5831,5409 5396,4273 4063) Alignment (genomic DNA sequence = upper lines): ACCATAGCAT ACATTAAACT TCCTACGGCA CTGGCATAGG GGACTCGTGA CATATACTCC 10709 |||||| | ACCATATC.. .......... .......... .......... .......... .......... 496 TTCTCTTCTC CTGACTGTGG AGCGAACATG GCAGTGAGAT GGATATTGGC AGCACTGGGG 10649 .......... .......... .......... .......... .......... .......... 496 GTATCAATGG GCTTAGATGA AGACATGCCA AACCTCGCCA AGACCTTCTG AATGTAGCTT 10589 .......... .......... .......... .......... .......... .......... 496 CTCTGTGACA AGAAAAGTTT CCTTCTCTCT CTGTCTCTAA TGATCTCCAT CCCTAAAATC 10529 .......... .......... .......... .......... .......... .......... 496 TTCCGAGCGG CTCCCAGATC CTTCATCTCA AACTCAGCAC TAAGTAAACC CTTCAGCTTC 10469 .......... .......... .......... .......... .......... .......... 496 TGAATGTCAT ACTTCTTCTT TGCAGCTATT AACATATCAT CTACATAAAG CACCAGATAG 10409 .......... .......... .......... .......... .......... .......... 496 ATGAATGAAT CATCATTGAG CCTATTGTAG TAGACACAAC AATCATATGA GCTCCGAGTA 10349 .......... .......... .......... .......... .......... .......... 496 TAGCCCAACT TCACCATATA GCTGTCAAAC CTTTTATACC ACTGCCTTGG AGACTGCTTA 10289 .......... .......... .......... .......... .......... .......... 496 AGTCCATATA AGGACTTCTT CAACTTGCAG ACGTGATTTT CCTTCCCTGG AACTTGGAAA 10229 .......... .......... .......... .......... .......... .......... 496 CCATCCGGTT GAGTCATGTA TATCTCTTCC TCCAACTCTC CATATAGAAA CACTGTCTTC 10169 .......... .......... .......... .......... .......... .......... 496 ACATCAAGTT GTTCAAGCTC CAGATTCTGA TGTGCAACTA TCGCTAGTAA CACTCGGATG 10109 .......... .......... .......... .......... .......... .......... 496 GAAGTATGTC TGACCACTGG TGAGAAGATC TCATTGTAGT CCACTCCCTC TCTTTGGTTG 10049 .......... .......... .......... .......... .......... .......... 496 AAACCTCTGG CAACAACCCT AGCTTTATAC TTGACTCCTT CTGGTGGTGA TATCCCTTCC 9989 .......... .......... .......... .......... .......... .......... 496 TTCTTCTTGA AAACCCATTT GCAAGTAATA ATCTTTCTCC CCGAAGGCTG TATGACCAGA 9929 .......... .......... .......... .......... .......... .......... 496 TCCCATGTCT GATTCTTGTG TAGGGACTCC ATCTCATCTC CCATAGCGGC AAACCATTTT 9869 | | ||| | | ||| || || .......... .......... ...GAATTCC ACCAAATCCA CCCAAGTA.. .......... 521 TCAGAATCAG AACTTAAAAT GGCTTCTTTG TAAGTAGACG GCTCAGATGT ATCTACCTCT 9809 .......... .......... .......... .......... .......... .......... 521 TCAGCAACCT GCAGTGCATA ACCCACCATG TCCTCAAAAC CATACCTCGT AGGTGGCCGA 9749 .......... .......... .......... .......... .......... .......... 521 ACTCCAACCC TCCTTGGCCG ATCTTGAGCT ATACTCTGAT GGATATCTGA TGGCATAGAT 9689 .......... .......... .......... .......... .......... .......... 521 TCTGGAATAT CAGTTTCTGT CTGTGGCTCT TGATCCTCCT CTTCAGGTTC CTTTAAATCT 9629 .......... .......... .......... .......... .......... .......... 521 CTCTCGTTCT GAATGACTTG AAACTCCACC TGTTTGTCAA GACTCCCAGT TTCTGACGTA 9569 .......... .......... .......... .......... .......... .......... 521 GTTGTAGGCT TCACAATGGT TCTAAGCAGA GAACTTTCAT CAAAGACAAC GTTCCTGCTC 9509 .......... .......... .......... .......... .......... .......... 521 ATAATAACCC TCTTTTCTGC TGGAGACCAG ATTCTGAAAC CTTTCACTCC ATCTCCGTAG 9449 .......... .......... .......... .......... .......... .......... 521 CCCACAAATA CTCCCTTTTT AGCTCTTGGT TCTAACTTAC CTTCACTGAC GTGATAGTAA 9389 .......... .......... .......... .......... .......... .......... 521 GCCGTACAAC CAAAAACTTT CAGATTTGAA TAATCAGCAG CTTTTCCAGA CCACATCTCC 9329 .......... .......... .......... .......... .......... .......... 521 ATAGGTGTCT TGCACTGTAT GCCTGTATGT GGTCCGCGGT TAATCAAGTA GCAAGCTGTA 9269 .......... .......... .......... .......... .......... .......... 521 CTAACCGCTT CTGCCCAGAA TCTTCTATCT AGCCCAGCAT TAGAGAGCAT GCACCTTGCT 9209 .......... .......... .......... .......... .......... .......... 521 CTCTCCAGAA GTGTTTGATT CATCCGCTCA GCTACACCGT TCTGCTGTGG TGTATTTCTG 9149 .......... .......... .......... .......... .......... .......... 521 ACTGTGCGAT GTCGAGGAAT CCCTTCATCC TTACAGAATT GATCAAATTT AGACCAACAG 9089 .......... .......... .......... .......... .......... .......... 521 AATTCCAGCC CATTATCAGT TCGCAACCTC TTGATCTTCT TCCCTGTTTG ATTTTCCATC 9029 .......... .......... .......... .......... .......... .......... 521 AAAATTTTCC ACTCCTTGAA CTTCTGGAAG GCTTCACTTT TATGCTTCAT CATGTACACC 8969 .......... .......... .......... .......... .......... .......... 521 CAAGTCATCC TTGAGTAGTC ATCAATAATG GACACAAAAA ATCTGCAGCC TCCCAAAGAC 8909 .......... .......... .......... .......... .......... .......... 521 TCAACACGGC ATGGACCCCA GCAATCAGAA TAGATATAAT CAAGTGTGCC TTTTGTTCTA 8849 .......... .......... .......... .......... .......... .......... 521 TGAATGGCCT TTGGAAACTT GTTGCGATGT AGTTTTCCAA AAACACAATG TTCACAAAAC 8789 .......... .......... .......... .......... .......... .......... 521 TCTAGGCTCT TAACCTTATG ACCAGCAAGT AAATCCTCCT TTGACAGAAT TTGCATCCCT 8729 .......... .......... .......... .......... .......... .......... 521 CTTTCACCCA TATGACCAAG TCTCATGTGC CATAACTTAG TCATATCCTT CTGGTGAAAT 8669 .......... .......... .......... .......... .......... .......... 521 TCTGACGATG CAACATGGGC TGAACCCGTA ACCGTGGAAC CTTGTAGAAA ATACAAAGTA 8609 .......... .......... .......... .......... .......... .......... 521 CCACGCATGA CACCTTTCAG AATCAAATTT GAACCCTTCC AGACCCGCAA GACTCCATCT 8549 .......... .......... .......... .......... .......... .......... 521 TTTCCCGACC AGCTGAATCC CTTGCTGTCC AAAAGACTGA GAGATATCAG ATTTTTCGTC 8489 .......... .......... .......... .......... .......... .......... 521 ATCAATGGAA CGTGCCTGAC CTCGTTCAAT GTGCAGAAGC TACCGTCATG TGTCCTTATC 8429 .......... .......... .......... .......... .......... .......... 521 TTGATCGAGC CTGTCCCAAC CACCTTGCAG ACAGAACTGT TGGCCATCGA GATGCTGCCT 8369 .......... .......... .......... .......... .......... .......... 521 CCGTCTACCT GCTCATAAGT CGTGAACCAC TCTCTCCTAG GACAGATGTG ATAGGATGCC 8309 .......... .......... .......... .......... .......... .......... 521 CCAGAATCAA GAATCCACAC ATCTGAATAA TGAGTGTGCT CATCCGCAAC TAGGGCAATA 8249 .......... .......... .......... .......... .......... .......... 521 TCTTCTTCAG AATTGGTGTC TTCTTCAGCA ACAGCAGCAG ACACTGATTG TTTTTCCGAT 8189 .......... .......... .......... .......... .......... .......... 521 TGCTTCTTCT TCTTCGGACA ATCAAATTTC CAATGTCCCT TCTTCTTGCA GTAATTACAA 8129 .......... .......... .......... .......... .......... .......... 521 ACATCATCCG GCTTTGCACC CTTCGACATC GGCTTATTTT TCTTTCCGCC GTTTTTCCTT 8069 .......... .......... .......... .......... .......... .......... 521 CCCTTTCCGC TACTGGTGAA CAGACCGGAA GGCTGTATGT CCGTACTTGT GCCGTTAGCC 8009 .......... .......... .......... .......... .......... .......... 521 TTATGCCGTA ATTCCCTGCT ATGAAGGGCC GATCTGACTT CTTCCAGTGA CACAGTATCT 7949 .......... .......... .......... .......... .......... .......... 521 TTCCCAACAA TGAACGATTG AACAAAATTC TCAAACGACA TTGGGAGAGA TATTAACAGA 7889 .......... .......... .......... .......... .......... .......... 521 ATCAGGGCAG CATCTTCATC CTCGATCTTC ACATCGATAT TACGCAATTC TAATAGCAAA 7829 .......... .......... .......... .......... .......... .......... 521 GTATTCAATT GCTCTAAGTG TTCCCTGAGT TGTGTACCTT CAGCCATTCG TAAACCGAAT 7769 .......... .......... .......... .......... .......... .......... 521 AGACGTTGTT TCAGAAGCAG CTTGTTGGTT AGAGATTTTG TCATGTACAA ACTCTCCAGC 7709 .......... .......... .......... .......... .......... .......... 521 TTCAACCACA GACCAGCAGC AGTCTCTTCA TCCGAGACCT CCGTGATGAC GTCATCCGCG 7649 .......... .......... .......... .......... .......... .......... 521 AGACACAGCA TGATCGTCGA GTGCGCCTTT TCCTCCAGAA TCGCCATCTC AGGAGTAACG 7589 .......... .......... .......... .......... .......... .......... 521 ACGGCGTTCT TGTCTTTCGA CAACGGCGCC CAGAAGCCTT GCTGTTTCAA CAAAGCCCGC 7529 .......... .......... .......... .......... .......... .......... 521 ATCTTGATCT GCCATAAACT GAAACTGTTC CTCCCTGTGA ATTTGTCGAT TTTCACGTTC 7469 .......... .......... .......... .......... .......... .......... 521 AAAGCAGACA TCTCGAATTC TCCAAGAACA CCGATTAACC GAGAGGCTCT GATACCAATT 7409 .......... .......... .......... .......... .......... .......... 521 TGTTGTGCGG AATTTGAGAT AATACGAGAA AATATAAACG CGAAAAACAA GACAACAGAT 7349 .......... .......... .......... .......... .......... .......... 521 TTACGTGGTT CACCAATAAA TTGGCTACGT CCACGGGAAG AGAGGGAACA GTTTTATTAT 7289 .......... .......... .......... .......... .......... .......... 521 GGAGAGGCAA AAACAGAATT ACAGAATAGG GTTTCCCATA GCGTCTATAT ATAGTGCTAA 7229 .......... .......... .......... .......... .......... .......... 521 GCTACGCCCT AACAGGCTTG GGCCCAACAT ACAGAATTAA CAGAAAATTA AGGGCCCAAT 7169 .......... .......... .......... .......... .......... .......... 521 ACAACAACAT TGTATACCGT CGGGCCGGGG GCGGAGACGC CCCCCCGGAC CCCCAGGCCA 7109 .......... .......... .......... .......... .......... .......... 521 GGGGGCGCGT CGCCCCCCTG GACCCCCCGA CTCGCTGACC GGGCAGCGAG ACCCCCGTCC 7049 .......... .......... .......... .......... .......... .......... 521 TTTCTGTTTT TAGCGGGTCC GATTCAAGGC ATTCAACATT GTCATTCTTA GAGTATGTTT 6989 .......... .......... .......... .......... .......... .......... 521 GGTATGAAGA AAAACATTTT TCAGAAAATG TTTTCTAACT TATGTTTGGT TGGGACAAAA 6929 .......... .......... .......... .......... .......... .......... 521 GTTTTGAAAA ATGTTTTCCA AATTAACTCA TTTTCCTCAA AATTAAGGAA AAAGACTTTC 6869 .......... .......... .......... .......... .......... .......... 521 TTTCAAAAAT TAAGGAAAAC ATTTTCCAAA ACTTTCCTCC AATTTTAAAT TACATTTTCT 6809 .......... .......... .......... .......... .......... .......... 521 TTTTGGAAAA AACAACAAGT TTTTTTAAAA ATTTTAATTT TAAAATTTAA TTTTTTTACC 6749 .......... .......... .......... .......... .......... .......... 521 CGATCCCTGA CCCCCACCCA CCCACCAACC ACCGGCTAGT CCCCCCCCTC CCTCCCCAAC 6689 .......... .......... .......... .......... .......... .......... 521 CCCACCCACT TCCCAAAAAA ATAATTTTGC TTTTTAAAAA TAATTTCAAC TTTGTTATAA 6629 .......... .......... .......... .......... .......... .......... 521 AGTATTTGTA TTATAGTGAA TGCATATCAT GTGGAGTCCT TTTTCGGATA TGGTTAAAGA 6569 .......... .......... .......... .......... .......... .......... 521 GTCCTACTTG GAGACCAAGT TAGATTTCTC CTATAAATAG AGTGCTACTC TTCATTGTAA 6509 .......... .......... .......... .......... .......... .......... 521 ATTCAATTCA TCAAGAGAAA TAACAAGTCT TCTCTTCTTT TCTCTCTAGT TTCTTCTTCT 6449 .......... .......... .......... .......... .......... .......... 521 TATTCTATAG TTTTATAACA CGTTATCAGC ACGAGACTCT AATTTCTCAA AAGTGAAGGT 6389 .......... .......... .......... .......... .......... .......... 521 TAGATTTGAA GAATAAATAA AGATATGGAT AATTCTAAGA ACATATTATC GAAATATGAA 6329 .......... .......... .......... .......... .......... .......... 521 GATATTTGTT TGATTGATTC TGGTACAACA CATACGATAT TCAAAAATAA GAATATTTTT 6269 .......... .......... .......... .......... .......... .......... 521 CTCATTTAAG TATGGGTAAA ATAAATGTTA CTACAATTTT TGGTAGTACT AATATGATTG 6209 .......... .......... .......... .......... .......... .......... 521 AGGATTTTGG AAGAGTCGTT GTAATTTTGC CCAAGGGAAC TAAACTCATC ATTAATAATG 6149 .......... .......... .......... .......... .......... .......... 521 TTATGTTTTC TCCAAAATCT AAGAGAAATT TGTTGAGTTT TAAAGATATC CGTGAAAATG 6089 .......... .......... .......... .......... .......... .......... 521 GTTATCATAT CCAATCAATG GATGAAATAA ATCTTGAATA TCTTGGTATC ACCAAGTATG 6029 .......... .......... .......... .......... .......... .......... 521 TCTCTGGACA GACATGTGTT ATAGAAAAGT TCCCTGCTTT ATCTTCTGGC TTGTATTGCA 5969 .......... .......... .......... .......... .......... .......... 521 CAAAAATTAG TGCAATTGAG GAACATTTTA TAGTAAATAA GAAGTTTACT GATTCCAATA 5909 .......... .......... .......... .......... .......... .......... 521 CATTTGTACT TTGGCATGAT CGTCTAGGAC ATCTTGGGGC AATAATGATG AGACGAATTA 5849 | |||||| |||| | | | | || .......... .......... .......ACT CTATTGGGGA AATATATAGG ATAACTCCTA 554 TAGAAAATTC GAATGAACAT CCACTAAAAG ACCTAAAAGT TCTTTTAAAT GGTAAATTTT 5789 ||| ||| | ||| AAGACTCTTC TA-GCAAC.. .......... .......... .......... .......... 571 CTTTTACTGC TTGTTATCAA GGCAAGTTAA TTGTGAGACC ATCACCAATC AAAGTTAAGA 5729 .......... .......... .......... .......... .......... .......... 571 CTGAGTCCCC TGCGTTCTTG GAACGTATAC ATGGGGATAT TTGTGGACCT ATTCACCCAC 5669 .......... .......... .......... .......... .......... .......... 571 CTAGTGGGTC ATTTAGATAT TTTATGGTTC TAATAGATGC TTCTTTCAGA TGGTTTCATG 5609 .......... .......... .......... .......... .......... .......... 571 TGTGCCTATT GTCATCTTGT AACTTGGCAT TTGCAAAATT ATTGGCACAA ATAGTAAGGT 5549 .......... .......... .......... .......... .......... .......... 571 TAAGGGCACA CTTTTCTGAT AATCAGATTA AGTCCATTCG TCTTGATAAT GCTGCAGAGT 5489 .......... .......... .......... .......... .......... .......... 571 TTTCATCCCA ATCATTTAAT GATTATTGTT TAGCAGTTGG ATAAGAGTTG AACACTCTGT 5429 .......... .......... .......... .......... .......... .......... 571 TGCTCATGTT CATACTCAGA ATGGTCTCGC AGAGTCATTA ATTAAACGTT TTCAATTAAT 5369 | |||| || | | .......... .........A ATGGAGTCAC CTA....... .......... .......... 585 AGCAAGACCA TTGCTTATGA AAACTAAGTT TCCCACTTCT GTGTGGGGAC ATGCAATTTT 5309 .......... .......... .......... .......... .......... .......... 585 GCATGCTGCA ACACTTATTC GTTTCAGACC GACAAGTTAT CATAAGGTTT TTGCATTGCA 5249 .......... .......... .......... .......... .......... .......... 585 ATTGGTTATG AGTCAAGAAC CTAATATATC CCATCTAAGA ATTTTTGGAA GTGTTGTACA 5189 .......... .......... .......... .......... .......... .......... 585 TGTGCCTGTG TCACCACCAA ATCGCAATAA GATGGGCTCT CAAAGAAGGT TAGGAATATA 5129 .......... .......... .......... .......... .......... .......... 585 TGTTGGGTTT GAGTCACCCT CCATTATTCT CTATCTTAAA CCATTGACTG GAGACATGTT 5069 .......... .......... .......... .......... .......... .......... 585 TACTGCTAGA TTTGCAGATT GTCGGTTTGA TGAGACACTT TTCTCAAAAT TAGGGGGAGA 5009 .......... .......... .......... .......... .......... .......... 585 GAATAGTGAA ATAAAATGAG AAATTTTGTG GAAAAATTTA TTATTGTCTC ATATTGATCC 4949 .......... .......... .......... .......... .......... .......... 585 ATATTATTCT ACTTGCGAAC AAGAAGTACA AAAGATTATT CATCTGCAGA AAATTGCTAA 4889 .......... .......... .......... .......... .......... .......... 585 TCAAATGTCA GACGCATTTA CAGATTTGAA AAGGATTACT AAATCACATA TTCCTGCAGA 4829 .......... .......... .......... .......... .......... .......... 585 GAATGTCCCA ATTCGAATTG ATGTCCCTAA AGGACCATCC ACTAGTGTCA TATCTAATGA 4769 .......... .......... .......... .......... .......... .......... 585 GTCAAAAACA CACGTAAAGC GTGGTAAACC ATTGGGGTCT AAGGATCAAA ATCCTAGAAA 4709 .......... .......... .......... .......... .......... .......... 585 AAGAAAGATT AAATGTCAAG ATGACACTAT GAAAAAATCT CATATGGAAG TTCAAAATTT 4649 .......... .......... .......... .......... .......... .......... 585 GAATAAGTCT GATATTCATG AAAGAATCAA TGAACTTGAA ACTCAAAGAA ATAATGAACT 4589 .......... .......... .......... .......... .......... .......... 585 ATCCATAAAT TTAAGAGATG TTGAAACTAA TATGAATCAA TCAGAAATAG TGGTTGATTA 4529 .......... .......... .......... .......... .......... .......... 585 TGTCTTTGCA TATAATGTTG CAACAAATAT CATGCAAGAT AATGAGGATC ATGAACCTCA 4469 .......... .......... .......... .......... .......... .......... 585 ATCTGTTATA GAATGTCGAC AACGAAATGA TTGGCCAAAA TGGCAAAAAG CAATTCAATC 4409 .......... .......... .......... .......... .......... .......... 585 AGAGTTGAAT TCACTTGCCA AGCGTGAAGT TTTTGGACCT ATAGTTCAAA CACCTTATGG 4349 .......... .......... .......... .......... .......... .......... 585 AATTAAACCT GTTGGTTACA AATGAATTTT TTTGCGAAAA AGAAATGAGA AAAAATAACA 4289 .......... .......... .......... .......... .......... .......... 585 TACAAAGGTA TAAAGCACGC CTTGTGGCAC AAGA-ATTTT CTCAAAGGCC TGGCGTCGAC 4230 | | |||| || || | ||||| |||||||||| ||||||||| .......... .....CCGGG GTTGTAACAA AAAATATTTT CTCAAAGGCC TGGCGTCGAA 630 TATGAAGAGA CATACTCACC CGTTTTGGAT GCAATAATAT TGCATTATCT CATTAGTTTC 4170 |||||||||| |||||||||| |||| ||||| ||||||| || || |||||| |||||||||| TATGAAGAGA CATACTCACC CGTTATGGAT GCAATAACAT TGGTTTATCT CATTAGTTTC 690 ACAGTCCATG AGCAACTTGA AATGCATTTG ATGGATGTGG TTATAGCCTA CCTTTATGGA 4110 |||||||||| |||||||||| |||||||||| |||||||||| ||| | |||| |||||||||| ACAGTCCATG AGCAACTTGA AATGCATTTG ATGGATGTGG TTACAACCTA CCTTTATGGA 750 TCACTTGATA ATGAGATATA CATGAAAATT CTTGAAGGAT TTGCGAT 4063 ||| || | |||||||||| |||||||||| | |||||||| ||||||| TCATTTAAAT ATGAGATATA CATGAAAATT CCTGAAGGAT TTGCGAT 797 hqPGS_C01HBa0163B20.1-_SGN-U345415+ (4273 4063) ******************************************************************************** EST sequence 25 -strand 822 n (File: SGN-U339741-) 1 TAAGAAGTAT AATGAGGTAG TGGGAATTGC AAAGAGATGC CATAAATTTG TGATAAAAAC 61 GAGATTTTAC GTTTATTTTC CAGGAACCAA TTATCAAGTA AAGTATGAGT GTAAATTATT 121 TCATCTAAAT AAAATCGAAA TCCTATTTTT TCATATAAAC CTTTTGGTAT GTAATTTAGG 181 ATAAACAGCA TAATATATCG GCGACAAACA AAACTGCATA ATCTACGTGG TTCACCAATA 241 GATTGGTTCC GTCCAAGGGA AGAGAGGTAG CAATTTTATT ATGCAGAGGC AAGATCAGAA 301 TTCCAGAATA GGGTTTCCCA TAGCGTCTAT ATATAGTGCT AAGCTACGCC CTAACAGGAT 361 TGGGACAGAT TCAAGGCATT CAGCACAACC ATTACTATTG GACTATTTTT TCTTAATCCA 421 CCAATTCAAT CAAAACATTA GTGAAAACAA CCACTAAATA TTTTTCAATG GGAATATAAT 481 AATTTTTAGC AGTGATCAGC ATGTCAGGCA TCAAAGATTC TTTTTGTTTC TAAAAACTCA 541 AACCTCGAAA TATCTGATTA AGAACCAACA AAGGAAACCA ACACATGATA ACAACATCAT 601 GCTCTTTCAG TTCATCTATT TACTTCGATC TCTTTAATTT ATTATTTAAA ATTAATGAAA 661 TAACTTCCTA CTCGGCACGA AAAATCCAAC CAGACGTGAA AATTCAGATA GTCAATCAAT 721 TGAACTAAAA TTTCAGTAAA ACAAAAAAAA AACCTGCAGC CCGGGGGATC CACTAGTTCT 781 AGAGCGGCCG CCACCGCGGT GGAGCTCCAG CAAAGTCTTC AA Predicted gene structure (within gDNA segment 15376 to 5842): Exon 1 11938 11677 ( 262 n); cDNA 104 363 ( 260 n); score: 0.773 Intron 1 11676 7033 (4644 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0) Exon 2 7032 6999 ( 34 n); cDNA 364 397 ( 34 n); score: 0.735 MATCH C01HBa0163B20.1- SGN-U339741- 0.773 296 0.360 C PGS_C01HBa0163B20.1-_SGN-U339741- (11938 11677,7032 6999) Alignment (genomic DNA sequence = upper lines): TATGTATTTT AATTGTCTAA ATCAATGTAA AATCAAAGAA GAAATATTTA ATATTATTGT 11879 |||| | | |||| | | ||| | ||| |||| || | | ||| |||| | | TATGAGTGTA AATTAT-TTC ATCTAAATAA AATCGAAATC CTATTTTTTC ATATAAACCT 162 CTGTTGTGCG GAATTTGAGA TAATACGAGA AAATATAAAC GCGAAAAACA AGACAACA-G 11820 | | || | ||||| || ||| || | |||||| |||| ||||| | || || -TTTGGTATG TAATTTAGGA TAA-ACAGCA TAATATATCG GCGACAAACA AAACTGCATA 220 ATTTACGTGG TTCACCAATA AATTGGCTAC GTCCACGGGA AGAGAGGGAG CAGTTTTATT 11760 || ||||||| |||||||||| ||||| | | ||||| |||| ||||||| || || ||||||| ATCTACGTGG TTCACCAATA GATTGGTTCC GTCCAAGGGA AGAGAGGTAG CAATTTTATT 280 ATGGAGAGGC AAAAACAGAA TTACAGAATA GGGTTTCCCA TAGCGTCTAT ATATAGTGCT 11700 ||| |||||| || | ||||| || ||||||| |||||||||| |||||||||| |||||||||| ATGCAGAGGC AAGATCAGAA TTCCAGAATA GGGTTTCCCA TAGCGTCTAT ATATAGTGCT 340 AAGCTACGCC CTAACAGGCT TGGGCCCAAC ATACAGAATC AACAGAAAAT TAAGGGCCCA 11640 |||||||||| |||||||| | ||| AAGCTACGCC CTAACAGGAT TGG....... .......... .......... .......... 363 ATACAACAAC ATTGTATACC GTCGGGCCGG GGGCGGAGAC GCCCCCCCGG ACCCCCAGGC 11580 .......... .......... .......... .......... .......... .......... 363 CAGGGGGCGC GTCGCCCCCC TGGACCCCCC GACTCGCTGA CCGGGCAGCG AGACCCCCGT 11520 .......... .......... .......... .......... .......... .......... 363 CCTTTCTGTT TGTAGCGGGT CCGATTCAAG GCATTCAACA AATCTCCACC TTGACTTGAA 11460 .......... .......... .......... .......... .......... .......... 363 TTCTCCGAAC AGATTCTTCA GACGCACTAT GATAGTGCCA GGACTCCCCC TCTTCCTCAG 11400 .......... .......... .......... .......... .......... .......... 363 AGTTGCCCCG CAGGGCAATT AACAGCTTCT GATGTTGAGC AAGTCCAAAC AGTGTTGAAA 11340 .......... .......... .......... .......... .......... .......... 363 CTTGCTCTGT GGAACCGGCT TTGTAAACAT ATCAGCAGGA TTATCAGCAG TTCCTACTTT 11280 .......... .......... .......... .......... .......... .......... 363 CTTCACCTTG ATTCTCTTCT CACTTCTCAG AAAATGATAC CTTACGTCAA TATGCTTGGT 11220 .......... .......... .......... .......... .......... .......... 363 TCTCTCATGA TGGACTTGAT CCTTGGCTAG ACAAATTGCG CTCAAACTGT CACAATACAC 11160 .......... .......... .......... .......... .......... .......... 363 CGTAGCCTGA TCATGATGCA GACCAAGATC ACTAACCAGC CCTTTCAACC AAATCCCTTC 11100 .......... .......... .......... .......... .......... .......... 363 TTTTGCAGCC TCTGTCAAGG CCATGTACTC CGCTTCCGTA GTAGACAAAG TCACTGTAGG 11040 .......... .......... .......... .......... .......... .......... 363 TTGCAAAGTT GCCTTCCAAC TGACGACAGA TCCTCCAAGG GTAAACACAT AGCCAGTCAT 10980 .......... .......... .......... .......... .......... .......... 363 CGATCTTCTT GTGTCAACAT CTCCAGCATA GTCTGAATCA GAATAGCCAG TAACTAAGCA 10920 .......... .......... .......... .......... .......... .......... 363 CTGAGTATCA CCTCCATAAA TGAGACCAAC GTCAGATGTA CCTCTAAGGT ACCGGAAAAT 10860 .......... .......... .......... .......... .......... .......... 363 TCTCTTCACA GCCTGCCAAT GTTCTCTCCC TGGTTGTCCC ATGAATCTGC TCTCTACACT 10800 .......... .......... .......... .......... .......... .......... 363 GACTGCATGT GCTAAATCTG GCCTTGTACA GACCATAGCA TACATTAAAC TTCCTACGGC 10740 .......... .......... .......... .......... .......... .......... 363 ACTGGCATAG GGGACTCGTG ACATATACTC CTTCTCTTCT CCTGACTGTG GAGCGAACAT 10680 .......... .......... .......... .......... .......... .......... 363 GGCAGTGAGA TGGATATTGG CAGCACTGGG GGTATCAATG GGCTTAGATG AAGACATGCC 10620 .......... .......... .......... .......... .......... .......... 363 AAACCTCGCC AAGACCTTCT GAATGTAGCT TCTCTGTGAC AAGAAAAGTT TCCTTCTCTC 10560 .......... .......... .......... .......... .......... .......... 363 TCTGTCTCTA ATGATCTCCA TCCCTAAAAT CTTCCGAGCG GCTCCCAGAT CCTTCATCTC 10500 .......... .......... .......... .......... .......... .......... 363 AAACTCAGCA CTAAGTAAAC CCTTCAGCTT CTGAATGTCA TACTTCTTCT TTGCAGCTAT 10440 .......... .......... .......... .......... .......... .......... 363 TAACATATCA TCTACATAAA GCACCAGATA GATGAATGAA TCATCATTGA GCCTATTGTA 10380 .......... .......... .......... .......... .......... .......... 363 GTAGACACAA CAATCATATG AGCTCCGAGT ATAGCCCAAC TTCACCATAT AGCTGTCAAA 10320 .......... .......... .......... .......... .......... .......... 363 CCTTTTATAC CACTGCCTTG GAGACTGCTT AAGTCCATAT AAGGACTTCT TCAACTTGCA 10260 .......... .......... .......... .......... .......... .......... 363 GACGTGATTT TCCTTCCCTG GAACTTGGAA ACCATCCGGT TGAGTCATGT ATATCTCTTC 10200 .......... .......... .......... .......... .......... .......... 363 CTCCAACTCT CCATATAGAA ACACTGTCTT CACATCAAGT TGTTCAAGCT CCAGATTCTG 10140 .......... .......... .......... .......... .......... .......... 363 ATGTGCAACT ATCGCTAGTA ACACTCGGAT GGAAGTATGT CTGACCACTG GTGAGAAGAT 10080 .......... .......... .......... .......... .......... .......... 363 CTCATTGTAG TCCACTCCCT CTCTTTGGTT GAAACCTCTG GCAACAACCC TAGCTTTATA 10020 .......... .......... .......... .......... .......... .......... 363 CTTGACTCCT TCTGGTGGTG ATATCCCTTC CTTCTTCTTG AAAACCCATT TGCAAGTAAT 9960 .......... .......... .......... .......... .......... .......... 363 AATCTTTCTC CCCGAAGGCT GTATGACCAG ATCCCATGTC TGATTCTTGT GTAGGGACTC 9900 .......... .......... .......... .......... .......... .......... 363 CATCTCATCT CCCATAGCGG CAAACCATTT TTCAGAATCA GAACTTAAAA TGGCTTCTTT 9840 .......... .......... .......... .......... .......... .......... 363 GTAAGTAGAC GGCTCAGATG TATCTACCTC TTCAGCAACC TGCAGTGCAT AACCCACCAT 9780 .......... .......... .......... .......... .......... .......... 363 GTCCTCAAAA CCATACCTCG TAGGTGGCCG AACTCCAACC CTCCTTGGCC GATCTTGAGC 9720 .......... .......... .......... .......... .......... .......... 363 TATACTCTGA TGGATATCTG ATGGCATAGA TTCTGGAATA TCAGTTTCTG TCTGTGGCTC 9660 .......... .......... .......... .......... .......... .......... 363 TTGATCCTCC TCTTCAGGTT CCTTTAAATC TCTCTCGTTC TGAATGACTT GAAACTCCAC 9600 .......... .......... .......... .......... .......... .......... 363 CTGTTTGTCA AGACTCCCAG TTTCTGACGT AGTTGTAGGC TTCACAATGG TTCTAAGCAG 9540 .......... .......... .......... .......... .......... .......... 363 AGAACTTTCA TCAAAGACAA CGTTCCTGCT CATAATAACC CTCTTTTCTG CTGGAGACCA 9480 .......... .......... .......... .......... .......... .......... 363 GATTCTGAAA CCTTTCACTC CATCTCCGTA GCCCACAAAT ACTCCCTTTT TAGCTCTTGG 9420 .......... .......... .......... .......... .......... .......... 363 TTCTAACTTA CCTTCACTGA CGTGATAGTA AGCCGTACAA CCAAAAACTT TCAGATTTGA 9360 .......... .......... .......... .......... .......... .......... 363 ATAATCAGCA GCTTTTCCAG ACCACATCTC CATAGGTGTC TTGCACTGTA TGCCTGTATG 9300 .......... .......... .......... .......... .......... .......... 363 TGGTCCGCGG TTAATCAAGT AGCAAGCTGT ACTAACCGCT TCTGCCCAGA ATCTTCTATC 9240 .......... .......... .......... .......... .......... .......... 363 TAGCCCAGCA TTAGAGAGCA TGCACCTTGC TCTCTCCAGA AGTGTTTGAT TCATCCGCTC 9180 .......... .......... .......... .......... .......... .......... 363 AGCTACACCG TTCTGCTGTG GTGTATTTCT GACTGTGCGA TGTCGAGGAA TCCCTTCATC 9120 .......... .......... .......... .......... .......... .......... 363 CTTACAGAAT TGATCAAATT TAGACCAACA GAATTCCAGC CCATTATCAG TTCGCAACCT 9060 .......... .......... .......... .......... .......... .......... 363 CTTGATCTTC TTCCCTGTTT GATTTTCCAT CAAAATTTTC CACTCCTTGA ACTTCTGGAA 9000 .......... .......... .......... .......... .......... .......... 363 GGCTTCACTT TTATGCTTCA TCATGTACAC CCAAGTCATC CTTGAGTAGT CATCAATAAT 8940 .......... .......... .......... .......... .......... .......... 363 GGACACAAAA AATCTGCAGC CTCCCAAAGA CTCAACACGG CATGGACCCC AGCAATCAGA 8880 .......... .......... .......... .......... .......... .......... 363 ATAGATATAA TCAAGTGTGC CTTTTGTTCT ATGAATGGCC TTTGGAAACT TGTTGCGATG 8820 .......... .......... .......... .......... .......... .......... 363 TAGTTTTCCA AAAACACAAT GTTCACAAAA CTCTAGGCTC TTAACCTTAT GACCAGCAAG 8760 .......... .......... .......... .......... .......... .......... 363 TAAATCCTCC TTTGACAGAA TTTGCATCCC TCTTTCACCC ATATGACCAA GTCTCATGTG 8700 .......... .......... .......... .......... .......... .......... 363 CCATAACTTA GTCATATCCT TCTGGTGAAA TTCTGACGAT GCAACATGGG CTGAACCCGT 8640 .......... .......... .......... .......... .......... .......... 363 AACCGTGGAA CCTTGTAGAA AATACAAAGT ACCACGCATG ACACCTTTCA GAATCAAATT 8580 .......... .......... .......... .......... .......... .......... 363 TGAACCCTTC CAGACCCGCA AGACTCCATC TTTTCCCGAC CAGCTGAATC CCTTGCTGTC 8520 .......... .......... .......... .......... .......... .......... 363 CAAAAGACTG AGAGATATCA GATTTTTCGT CATCAATGGA ACGTGCCTGA CCTCGTTCAA 8460 .......... .......... .......... .......... .......... .......... 363 TGTGCAGAAG CTACCGTCAT GTGTCCTTAT CTTGATCGAG CCTGTCCCAA CCACCTTGCA 8400 .......... .......... .......... .......... .......... .......... 363 GACAGAACTG TTGGCCATCG AGATGCTGCC TCCGTCTACC TGCTCATAAG TCGTGAACCA 8340 .......... .......... .......... .......... .......... .......... 363 CTCTCTCCTA GGACAGATGT GATAGGATGC CCCAGAATCA AGAATCCACA CATCTGAATA 8280 .......... .......... .......... .......... .......... .......... 363 ATGAGTGTGC TCATCCGCAA CTAGGGCAAT ATCTTCTTCA GAATTGGTGT CTTCTTCAGC 8220 .......... .......... .......... .......... .......... .......... 363 AACAGCAGCA GACACTGATT GTTTTTCCGA TTGCTTCTTC TTCTTCGGAC AATCAAATTT 8160 .......... .......... .......... .......... .......... .......... 363 CCAATGTCCC TTCTTCTTGC AGTAATTACA AACATCATCC GGCTTTGCAC CCTTCGACAT 8100 .......... .......... .......... .......... .......... .......... 363 CGGCTTATTT TTCTTTCCGC CGTTTTTCCT TCCCTTTCCG CTACTGGTGA ACAGACCGGA 8040 .......... .......... .......... .......... .......... .......... 363 AGGCTGTATG TCCGTACTTG TGCCGTTAGC CTTATGCCGT AATTCCCTGC TATGAAGGGC 7980 .......... .......... .......... .......... .......... .......... 363 CGATCTGACT TCTTCCAGTG ACACAGTATC TTTCCCAACA ATGAACGATT GAACAAAATT 7920 .......... .......... .......... .......... .......... .......... 363 CTCAAACGAC ATTGGGAGAG ATATTAACAG AATCAGGGCA GCATCTTCAT CCTCGATCTT 7860 .......... .......... .......... .......... .......... .......... 363 CACATCGATA TTACGCAATT CTAATAGCAA AGTATTCAAT TGCTCTAAGT GTTCCCTGAG 7800 .......... .......... .......... .......... .......... .......... 363 TTGTGTACCT TCAGCCATTC GTAAACCGAA TAGACGTTGT TTCAGAAGCA GCTTGTTGGT 7740 .......... .......... .......... .......... .......... .......... 363 TAGAGATTTT GTCATGTACA AACTCTCCAG CTTCAACCAC AGACCAGCAG CAGTCTCTTC 7680 .......... .......... .......... .......... .......... .......... 363 ATCCGAGACC TCCGTGATGA CGTCATCCGC GAGACACAGC ATGATCGTCG AGTGCGCCTT 7620 .......... .......... .......... .......... .......... .......... 363 TTCCTCCAGA ATCGCCATCT CAGGAGTAAC GACGGCGTTC TTGTCTTTCG ACAACGGCGC 7560 .......... .......... .......... .......... .......... .......... 363 CCAGAAGCCT TGCTGTTTCA ACAAAGCCCG CATCTTGATC TGCCATAAAC TGAAACTGTT 7500 .......... .......... .......... .......... .......... .......... 363 CCTCCCTGTG AATTTGTCGA TTTTCACGTT CAAAGCAGAC ATCTCGAATT CTCCAAGAAC 7440 .......... .......... .......... .......... .......... .......... 363 ACCGATTAAC CGAGAGGCTC TGATACCAAT TTGTTGTGCG GAATTTGAGA TAATACGAGA 7380 .......... .......... .......... .......... .......... .......... 363 AAATATAAAC GCGAAAAACA AGACAACAGA TTTACGTGGT TCACCAATAA ATTGGCTACG 7320 .......... .......... .......... .......... .......... .......... 363 TCCACGGGAA GAGAGGGAAC AGTTTTATTA TGGAGAGGCA AAAACAGAAT TACAGAATAG 7260 .......... .......... .......... .......... .......... .......... 363 GGTTTCCCAT AGCGTCTATA TATAGTGCTA AGCTACGCCC TAACAGGCTT GGGCCCAACA 7200 .......... .......... .......... .......... .......... .......... 363 TACAGAATTA ACAGAAAATT AAGGGCCCAA TACAACAACA TTGTATACCG TCGGGCCGGG 7140 .......... .......... .......... .......... .......... .......... 363 GGCGGAGACG CCCCCCCGGA CCCCCAGGCC AGGGGGCGCG TCGCCCCCCT GGACCCCCCG 7080 .......... .......... .......... .......... .......... .......... 363 ACTCGCTGAC CGGGCAGCGA GACCCCCGTC CTTTCTGTTT TTAGCGGGTC CGATTCAAGG 7020 | | ||||||||| .......... .......... .......... .......... .......GAC AGATTCAAGG 376 CATTCAACAT TGTCATTCTT A 6999 |||||| || |||| | | CATTCAGCAC AACCATTACT A 397 hqPGS_C01HBa0163B20.1-_SGN-U339741- (11938 11677,7032 6999) ******************************************************************************** EST sequence 24 -strand 796 n (File: SGN-U339740-) 1 GGAAAATTTG GGCAAAAATT CCAATATTTA CTCGTGTGAT TTTCCCATGA TCCTAACTCA 61 TTAGGGAAAA AGATAATGGT ACGACATATT CTCACAAATA TGAAAGCAAA AATCCAACTT 121 TTTGAAAATG AACATTGATA TCCGAAATTT AATATGAATC GAGTAAATAT TAACGCGAAA 181 AACAAGACAC AAAATTTACG TGGTTCACCA ATATATTGGC TACGTCCACG GAAAAAGAGG 241 GAGCAGTTTT AGTATGGAGA GGCAAATACA GAATTACAGA ATAGGGTTTC CCATAGGGTC 301 TATATATAGA GCTAAGCTAC GCCCTAACAG GTATGGGCCC GATTCAAGGC ATTCAACAAA 361 ACCATTACTA TTATACTATT TTTTCTTAAT CCACCAATTC AATCAAAACA TTAGTGAAAT 421 CAACCACTAA ATATTTTTCA ATGGGAAAAT AATAATTTTT AGCAGTGATC AGCATGTCAG 481 GCATCAAAGA TTCTTTTTGT TTCTAAAAAC TCAAAACTCG AAATATCTGA TTAAGAACCA 541 ACAAAGGAAA CCAACACATG ATAACAACAT CATGCTCTTT CAGTTCATCT ATTTACTTCG 601 ATCTCTTTAA TTTATTATTT AAAATTAATG AAATAACTTC CTACACGGCA CGAAAAATCC 661 AACCAGACGT GAAAATTCAG ATAGTCAATC AACTGAACTA AAATTTCAGT AAAACAAAAA 721 AAAAACCTGC AGCCCGGGGG ATCCACTAGT TCTAGAGCGG CCGCCACCGC GGTGGAGCTC 781 CAGCTTTGGT GTCAAG Predicted gene structure (within gDNA segment 11090 to 1963): Exon 1 9903 9881 ( 23 n); cDNA 81 103 ( 23 n); score: 0.522 Intron 1 9880 8305 (1576 n); Pd: 0.810 (s: 0), Pa: 0.000 (s: 0) Exon 2 8304 8276 ( 29 n); cDNA 104 131 ( 28 n); score: 0.724 Intron 2 8275 7413 ( 863 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.74) Exon 3 7412 7206 ( 207 n); cDNA 132 338 ( 207 n); score: 0.874 Intron 3 7205 7031 ( 175 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0) Exon 4 7030 6999 ( 32 n); cDNA 339 370 ( 32 n); score: 0.812 MATCH C01HBa0163B20.1- SGN-U339740- 0.874 291 0.366 C PGS_C01HBa0163B20.1-_SGN-U339740- (9903 9881,8304 8276,7412 7206,7030 6999) Alignment (genomic DNA sequence = upper lines): ACTCCATCTC ATCTCCCATA GCGGCAAACC ATTTTTCAGA ATCAGAACTT AAAATGGCTT 9844 || ||| | || | ||| ACGACATATT CTCACAAATA TGA....... .......... .......... .......... 103 CTTTGTAAGT AGACGGCTCA GATGTATCTA CCTCTTCAGC AACCTGCAGT GCATAACCCA 9784 .......... .......... .......... .......... .......... .......... 103 CCATGTCCTC AAAACCATAC CTCGTAGGTG GCCGAACTCC AACCCTCCTT GGCCGATCTT 9724 .......... .......... .......... .......... .......... .......... 103 GAGCTATACT CTGATGGATA TCTGATGGCA TAGATTCTGG AATATCAGTT TCTGTCTGTG 9664 .......... .......... .......... .......... .......... .......... 103 GCTCTTGATC CTCCTCTTCA GGTTCCTTTA AATCTCTCTC GTTCTGAATG ACTTGAAACT 9604 .......... .......... .......... .......... .......... .......... 103 CCACCTGTTT GTCAAGACTC CCAGTTTCTG ACGTAGTTGT AGGCTTCACA ATGGTTCTAA 9544 .......... .......... .......... .......... .......... .......... 103 GCAGAGAACT TTCATCAAAG ACAACGTTCC TGCTCATAAT AACCCTCTTT TCTGCTGGAG 9484 .......... .......... .......... .......... .......... .......... 103 ACCAGATTCT GAAACCTTTC ACTCCATCTC CGTAGCCCAC AAATACTCCC TTTTTAGCTC 9424 .......... .......... .......... .......... .......... .......... 103 TTGGTTCTAA CTTACCTTCA CTGACGTGAT AGTAAGCCGT ACAACCAAAA ACTTTCAGAT 9364 .......... .......... .......... .......... .......... .......... 103 TTGAATAATC AGCAGCTTTT CCAGACCACA TCTCCATAGG TGTCTTGCAC TGTATGCCTG 9304 .......... .......... .......... .......... .......... .......... 103 TATGTGGTCC GCGGTTAATC AAGTAGCAAG CTGTACTAAC CGCTTCTGCC CAGAATCTTC 9244 .......... .......... .......... .......... .......... .......... 103 TATCTAGCCC AGCATTAGAG AGCATGCACC TTGCTCTCTC CAGAAGTGTT TGATTCATCC 9184 .......... .......... .......... .......... .......... .......... 103 GCTCAGCTAC ACCGTTCTGC TGTGGTGTAT TTCTGACTGT GCGATGTCGA GGAATCCCTT 9124 .......... .......... .......... .......... .......... .......... 103 CATCCTTACA GAATTGATCA AATTTAGACC AACAGAATTC CAGCCCATTA TCAGTTCGCA 9064 .......... .......... .......... .......... .......... .......... 103 ACCTCTTGAT CTTCTTCCCT GTTTGATTTT CCATCAAAAT TTTCCACTCC TTGAACTTCT 9004 .......... .......... .......... .......... .......... .......... 103 GGAAGGCTTC ACTTTTATGC TTCATCATGT ACACCCAAGT CATCCTTGAG TAGTCATCAA 8944 .......... .......... .......... .......... .......... .......... 103 TAATGGACAC AAAAAATCTG CAGCCTCCCA AAGACTCAAC ACGGCATGGA CCCCAGCAAT 8884 .......... .......... .......... .......... .......... .......... 103 CAGAATAGAT ATAATCAAGT GTGCCTTTTG TTCTATGAAT GGCCTTTGGA AACTTGTTGC 8824 .......... .......... .......... .......... .......... .......... 103 GATGTAGTTT TCCAAAAACA CAATGTTCAC AAAACTCTAG GCTCTTAACC TTATGACCAG 8764 .......... .......... .......... .......... .......... .......... 103 CAAGTAAATC CTCCTTTGAC AGAATTTGCA TCCCTCTTTC ACCCATATGA CCAAGTCTCA 8704 .......... .......... .......... .......... .......... .......... 103 TGTGCCATAA CTTAGTCATA TCCTTCTGGT GAAATTCTGA CGATGCAACA TGGGCTGAAC 8644 .......... .......... .......... .......... .......... .......... 103 CCGTAACCGT GGAACCTTGT AGAAAATACA AAGTACCACG CATGACACCT TTCAGAATCA 8584 .......... .......... .......... .......... .......... .......... 103 AATTTGAACC CTTCCAGACC CGCAAGACTC CATCTTTTCC CGACCAGCTG AATCCCTTGC 8524 .......... .......... .......... .......... .......... .......... 103 TGTCCAAAAG ACTGAGAGAT ATCAGATTTT TCGTCATCAA TGGAACGTGC CTGACCTCGT 8464 .......... .......... .......... .......... .......... .......... 103 TCAATGTGCA GAAGCTACCG TCATGTGTCC TTATCTTGAT CGAGCCTGTC CCAACCACCT 8404 .......... .......... .......... .......... .......... .......... 103 TGCAGACAGA ACTGTTGGCC ATCGAGATGC TGCCTCCGTC TACCTGCTCA TAAGTCGTGA 8344 .......... .......... .......... .......... .......... .......... 103 ACCACTCTCT CCTAGGACAG ATGTGATAGG ATGCCCCAGA ATCAAGAATC CACACATCTG 8284 | | ||| |||| || || | | .......... .......... .......... .........A AGCAAAAATC CA-ACTTTTT 123 AATAATGAGT GTGCTCATCC GCAACTAGGG CAATATCTTC TTCAGAATTG GTGTCTTCTT 8224 | ||||| GAAAATGA.. .......... .......... .......... .......... .......... 131 CAGCAACAGC AGCAGACACT GATTGTTTTT CCGATTGCTT CTTCTTCTTC GGACAATCAA 8164 .......... .......... .......... .......... .......... .......... 131 ATTTCCAATG TCCCTTCTTC TTGCAGTAAT TACAAACATC ATCCGGCTTT GCACCCTTCG 8104 .......... .......... .......... .......... .......... .......... 131 ACATCGGCTT ATTTTTCTTT CCGCCGTTTT TCCTTCCCTT TCCGCTACTG GTGAACAGAC 8044 .......... .......... .......... .......... .......... .......... 131 CGGAAGGCTG TATGTCCGTA CTTGTGCCGT TAGCCTTATG CCGTAATTCC CTGCTATGAA 7984 .......... .......... .......... .......... .......... .......... 131 GGGCCGATCT GACTTCTTCC AGTGACACAG TATCTTTCCC AACAATGAAC GATTGAACAA 7924 .......... .......... .......... .......... .......... .......... 131 AATTCTCAAA CGACATTGGG AGAGATATTA ACAGAATCAG GGCAGCATCT TCATCCTCGA 7864 .......... .......... .......... .......... .......... .......... 131 TCTTCACATC GATATTACGC AATTCTAATA GCAAAGTATT CAATTGCTCT AAGTGTTCCC 7804 .......... .......... .......... .......... .......... .......... 131 TGAGTTGTGT ACCTTCAGCC ATTCGTAAAC CGAATAGACG TTGTTTCAGA AGCAGCTTGT 7744 .......... .......... .......... .......... .......... .......... 131 TGGTTAGAGA TTTTGTCATG TACAAACTCT CCAGCTTCAA CCACAGACCA GCAGCAGTCT 7684 .......... .......... .......... .......... .......... .......... 131 CTTCATCCGA GACCTCCGTG ATGACGTCAT CCGCGAGACA CAGCATGATC GTCGAGTGCG 7624 .......... .......... .......... .......... .......... .......... 131 CCTTTTCCTC CAGAATCGCC ATCTCAGGAG TAACGACGGC GTTCTTGTCT TTCGACAACG 7564 .......... .......... .......... .......... .......... .......... 131 GCGCCCAGAA GCCTTGCTGT TTCAACAAAG CCCGCATCTT GATCTGCCAT AAACTGAAAC 7504 .......... .......... .......... .......... .......... .......... 131 TGTTCCTCCC TGTGAATTTG TCGATTTTCA CGTTCAAAGC AGACATCTCG AATTCTCCAA 7444 .......... .......... .......... .......... .......... .......... 131 GAACACCGAT TAACCGAGAG GCTCTGATAC CAATTTGTTG TGCGGAATTT GAGATAATAC 7384 | ||| | | || ||||| | || | | .......... .......... .......... .ACATTGATA TCCGAAATTT AATATGAATC 160 GAGAAAATAT AAACGCGAAA AACAAGACAA CAGATTTACG TGGTTCACCA ATAAATTGGC 7324 ||| |||||| ||||||||| ||||||||| | ||||||| |||||||||| ||| |||||| GAGTAAATAT TAACGCGAAA AACAAGACAC AAAATTTACG TGGTTCACCA ATATATTGGC 220 TACGTCCACG GGAAGAGAGG GAACAGTTTT ATTATGGAGA GGCAAAAACA GAATTACAGA 7264 |||||||||| | || ||||| || ||||||| | |||||||| |||||| ||| |||||||||| TACGTCCACG GAAAAAGAGG GAGCAGTTTT AGTATGGAGA GGCAAATACA GAATTACAGA 280 ATAGGGTTTC CCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAACAG GCTTGGGCCC 7204 |||||||||| |||||| ||| ||||||||| |||||||||| |||||||||| | ||||| ATAGGGTTTC CCATAGGGTC TATATATAGA GCTAAGCTAC GCCCTAACAG GTATGGGC.. 338 AACATACAGA ATTAACAGAA AATTAAGGGC CCAATACAAC AACATTGTAT ACCGTCGGGC 7144 .......... .......... .......... .......... .......... .......... 338 CGGGGGCGGA GACGCCCCCC CGGACCCCCA GGCCAGGGGG CGCGTCGCCC CCCTGGACCC 7084 .......... .......... .......... .......... .......... .......... 338 CCCGACTCGC TGACCGGGCA GCGAGACCCC CGTCCTTTCT GTTTTTAGCG GGTCCGATTC 7024 ||||||| .......... .......... .......... .......... .......... ...CCGATTC 345 AAGGCATTCA ACATTGTCAT TCTTA 6999 |||||||||| ||| ||| | || AAGGCATTCA ACAAAACCAT TACTA 370 hqPGS_C01HBa0163B20.1-_SGN-U339740- (8304 8276,7412 7206,7030 6999) ******************************************************************************** EST sequence 29 -strand 649 n (File: SGN-U330105-) 1 AGTCATGTAT ATCTCTTCCT CCAACTCTCC ATGTAGAAAC GCTGTCTTCA CATCAAGTGT 61 TTCAAGCTCC AGATTCTGAT GTGCAACTAT CGCTAGTAAC ACTCGGATGG AAGTATGTCT 121 GACCACTGGT GAGAAGATCT CATTGTAGTC CACTCCCTCT CTTTGGTTGA AACCTCTAGC 181 AACAACCCTG ACTTTATACT TGACTCCTTC TGCTGGTGAT ATCCCTTCCT TCTTCTTGAA 241 AACCCATTTG CAAGTAATAA TCTTTCTCCC CGAAGGCTGT ATGACCAGAT CCCATGTCTG 301 ATTCTTGTGT AGGGACTCCA TCTCATCTCC CATAGCGGCA AACCATTTTT CAGAATCAGA 361 ACTTAAAATG GCTTCTTTGT AAGTAGACGG CTCAGATGTA TCTACCTCTT CAGCAACCTG 421 CAGTGCATAA CCCACCATGT CCTCAAAACC ATACCTCGTA GGTGGCCGAA CTCCAACCCT 481 CCTTGGCCGA TCTTGAGCTA TACTCTGATG GATATCTGAT GGCATAGATT CTGGAATATC 541 AGTTTCAGTC TGTGGCTCTT GATCCTCCTC TTCAGGTTCC TTTAAATCGC TCTCGTTCTG 601 AATGACTTGA AACTCCACCT GTTTGTCAAG ACTCCTAGTT TCTGACGTA Predicted gene structure (within gDNA segment 10827 to 8843): Exon 1 10217 9569 ( 649 n); cDNA 1 649 ( 649 n); score: 0.983 MATCH C01HBa0163B20.1- SGN-U330105- 0.983 649 1.000 C PGS_C01HBa0163B20.1-_SGN-U330105- (10217 9569) Alignment (genomic DNA sequence = upper lines): AGTCATGTAT ATCTCTTCCT CCAACTCTCC ATATAGAAAC ACTGTCTTCA CATCAAGTTG 10158 |||||||||| |||||||||| |||||||||| || ||||||| ||||||||| |||||||| AGTCATGTAT ATCTCTTCCT CCAACTCTCC ATGTAGAAAC GCTGTCTTCA CATCAAGTGT 60 TTCAAGCTCC AGATTCTGAT GTGCAACTAT CGCTAGTAAC ACTCGGATGG AAGTATGTCT 10098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAAGCTCC AGATTCTGAT GTGCAACTAT CGCTAGTAAC ACTCGGATGG AAGTATGTCT 120 GACCACTGGT GAGAAGATCT CATTGTAGTC CACTCCCTCT CTTTGGTTGA AACCTCTGGC 10038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || GACCACTGGT GAGAAGATCT CATTGTAGTC CACTCCCTCT CTTTGGTTGA AACCTCTAGC 180 AACAACCCTA GCTTTATACT TGACTCCTTC TGGTGGTGAT ATCCCTTCCT TCTTCTTGAA 9978 ||||||||| ||||||||| |||||||||| || ||||||| |||||||||| |||||||||| AACAACCCTG ACTTTATACT TGACTCCTTC TGCTGGTGAT ATCCCTTCCT TCTTCTTGAA 240 AACCCATTTG CAAGTAATAA TCTTTCTCCC CGAAGGCTGT ATGACCAGAT CCCATGTCTG 9918 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCCATTTG CAAGTAATAA TCTTTCTCCC CGAAGGCTGT ATGACCAGAT CCCATGTCTG 300 ATTCTTGTGT AGGGACTCCA TCTCATCTCC CATAGCGGCA AACCATTTTT CAGAATCAGA 9858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCTTGTGT AGGGACTCCA TCTCATCTCC CATAGCGGCA AACCATTTTT CAGAATCAGA 360 ACTTAAAATG GCTTCTTTGT AAGTAGACGG CTCAGATGTA TCTACCTCTT CAGCAACCTG 9798 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTAAAATG GCTTCTTTGT AAGTAGACGG CTCAGATGTA TCTACCTCTT CAGCAACCTG 420 CAGTGCATAA CCCACCATGT CCTCAAAACC ATACCTCGTA GGTGGCCGAA CTCCAACCCT 9738 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTGCATAA CCCACCATGT CCTCAAAACC ATACCTCGTA GGTGGCCGAA CTCCAACCCT 480 CCTTGGCCGA TCTTGAGCTA TACTCTGATG GATATCTGAT GGCATAGATT CTGGAATATC 9678 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTGGCCGA TCTTGAGCTA TACTCTGATG GATATCTGAT GGCATAGATT CTGGAATATC 540 AGTTTCTGTC TGTGGCTCTT GATCCTCCTC TTCAGGTTCC TTTAAATCTC TCTCGTTCTG 9618 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| AGTTTCAGTC TGTGGCTCTT GATCCTCCTC TTCAGGTTCC TTTAAATCGC TCTCGTTCTG 600 AATGACTTGA AACTCCACCT GTTTGTCAAG ACTCCCAGTT TCTGACGTA 9569 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| AATGACTTGA AACTCCACCT GTTTGTCAAG ACTCCTAGTT TCTGACGTA 649 hqPGS_C01HBa0163B20.1-_SGN-U330105- (10217 9569) ******************************************************************************** EST sequence 14 -strand 946 n (File: SGN-U345812-) 1 TTCTGTCAAG GCCCATGTAC TCGGCTTCCG TAGTAGACAA AGTCACTGTA GGTGCAAAAG 61 TTGCCTTCCA ACTGACGACA GATCCTCCCA GGGTAAACAC ATAGCCAGTC ATCGATCTTC 121 TTGTGTCAAC ATCTCCAGCA TAGTCTGAAT CAGAATAGCC AGTAACCAAG CACTGAGTAT 181 CACCTCCATA AATGAGACCA ACGTCAGATG TACCTCTAAG GTACCGGAAA ATTCTCTTCA 241 CAGCCTGCCA ATGTTCTCTC CCTGGTTGTC CCATGAATCT GCTCACTACA CTGACTGCAT 301 GTGCTAAATC TGGCCTTGTA CAGACCATAG CATACATCAA ACTTCTTACG GCACTGGCAT 361 AAGGGACTCG TGACATATAC TCCTTCTCTT CTTCTGACTG TGGAGCGAAC ATGGCAGTGA 421 GATGGATATT GGCAGCACTG GGGGTATCAA TGGGCTTAGA TGAAGACATG CCAAACCTCG 481 CCAAGACCTT CTGAATGTAG CTTCTCTGTG ACAAGAAAAG TTTCCTTCTC TCTCTGTCTC 541 TAATGATCTC CATCCCTAAA ATCTTCCGAG CGGCTCCCAG ATCCTTCATC TCAAACTCAG 601 CACTAAGTAA ACCCTTCAGC TTCTGAATGT CATACTTCTT CTTTGCAGCT ATCAACATAT 661 CATCTACATA AAGCACCAGA TAGATGAATG AATCATCATT GAGCCTATTG TAGTAGACAC 721 AACAATCATA TGAGCTCCGA GTATAGCCCA ACTTCACCAT ATAGCTGTCA AACCTTTTAT 781 ACCACTGCCT TGGAGACTGC TTAAGTCCAT ATAAGGACTT CTTCAACTTG CAGACGTGAT 841 TTTCCTTCCC TGGAACTTGG AAACCCCTCG TGCCGAATTC CTGCAGCCCG GGGGATCCAC 901 TAGTTCTAGA GCGGCCNGCC ACCGCGGTGG AGCTCCNGCC CCCAAA Predicted gene structure (within gDNA segment 11908 to 8817): Exon 1 11089 10222 ( 868 n); cDNA 2 870 ( 869 n); score: 0.980 MATCH C01HBa0163B20.1- SGN-U345812- 0.980 868 0.918 C PGS_C01HBa0163B20.1-_SGN-U345812- (11089 10222) Alignment (genomic DNA sequence = upper lines): TCTGTCAAGG -CCATGTACT CCGCTTCCGT AGTAGACAAA GTCACTGTAG GTTGCAAAGT 11031 |||||||||| ||||||||| | |||||||| |||||||||| |||||||||| || ||||| TCTGTCAAGG CCCATGTACT CGGCTTCCGT AGTAGACAAA GTCACTGTAG GTGCAAAAGT 61 TGCCTTCCAA CTGACGACAG ATCCTCCAAG GGTAAACACA TAGCCAGTCA TCGATCTTCT 10971 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TGCCTTCCAA CTGACGACAG ATCCTCCCAG GGTAAACACA TAGCCAGTCA TCGATCTTCT 121 TGTGTCAACA TCTCCAGCAT AGTCTGAATC AGAATAGCCA GTAACTAAGC ACTGAGTATC 10911 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TGTGTCAACA TCTCCAGCAT AGTCTGAATC AGAATAGCCA GTAACCAAGC ACTGAGTATC 181 ACCTCCATAA ATGAGACCAA CGTCAGATGT ACCTCTAAGG TACCGGAAAA TTCTCTTCAC 10851 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCCATAA ATGAGACCAA CGTCAGATGT ACCTCTAAGG TACCGGAAAA TTCTCTTCAC 241 AGCCTGCCAA TGTTCTCTCC CTGGTTGTCC CATGAATCTG CTCTCTACAC TGACTGCATG 10791 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| AGCCTGCCAA TGTTCTCTCC CTGGTTGTCC CATGAATCTG CTCACTACAC TGACTGCATG 301 TGCTAAATCT GGCCTTGTAC AGACCATAGC ATACATTAAA CTTCCTACGG CACTGGCATA 10731 |||||||||| |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| TGCTAAATCT GGCCTTGTAC AGACCATAGC ATACATCAAA CTTCTTACGG CACTGGCATA 361 GGGGACTCGT GACATATACT CCTTCTCTTC TCCTGACTGT GGAGCGAACA TGGCAGTGAG 10671 ||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AGGGACTCGT GACATATACT CCTTCTCTTC TTCTGACTGT GGAGCGAACA TGGCAGTGAG 421 ATGGATATTG GCAGCACTGG GGGTATCAAT GGGCTTAGAT GAAGACATGC CAAACCTCGC 10611 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGATATTG GCAGCACTGG GGGTATCAAT GGGCTTAGAT GAAGACATGC CAAACCTCGC 481 CAAGACCTTC TGAATGTAGC TTCTCTGTGA CAAGAAAAGT TTCCTTCTCT CTCTGTCTCT 10551 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGACCTTC TGAATGTAGC TTCTCTGTGA CAAGAAAAGT TTCCTTCTCT CTCTGTCTCT 541 AATGATCTCC ATCCCTAAAA TCTTCCGAGC GGCTCCCAGA TCCTTCATCT CAAACTCAGC 10491 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGATCTCC ATCCCTAAAA TCTTCCGAGC GGCTCCCAGA TCCTTCATCT CAAACTCAGC 601 ACTAAGTAAA CCCTTCAGCT TCTGAATGTC ATACTTCTTC TTTGCAGCTA TTAACATATC 10431 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ACTAAGTAAA CCCTTCAGCT TCTGAATGTC ATACTTCTTC TTTGCAGCTA TCAACATATC 661 ATCTACATAA AGCACCAGAT AGATGAATGA ATCATCATTG AGCCTATTGT AGTAGACACA 10371 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTACATAA AGCACCAGAT AGATGAATGA ATCATCATTG AGCCTATTGT AGTAGACACA 721 ACAATCATAT GAGCTCCGAG TATAGCCCAA CTTCACCATA TAGCTGTCAA ACCTTTTATA 10311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATCATAT GAGCTCCGAG TATAGCCCAA CTTCACCATA TAGCTGTCAA ACCTTTTATA 781 CCACTGCCTT GGAGACTGCT TAAGTCCATA TAAGGACTTC TTCAACTTGC AGACGTGATT 10251 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACTGCCTT GGAGACTGCT TAAGTCCATA TAAGGACTTC TTCAACTTGC AGACGTGATT 841 TTCCTTCCCT GGAACTTGGA AACCATCCG 10222 |||||||||| |||||||||| |||| || TTCCTTCCCT GGAACTTGGA AACCCCTCG 870 hqPGS_C01HBa0163B20.1-_SGN-U345812- (11089 10222) ******************************************************************************** EST sequence 10 -strand 1754 n (File: SGN-U314435-) 1 ATATGTAAAT TGTAATGAAT AATAAAATGT AACAATTACA AAATTCAAAG ACATACGACA 61 ATAAATCATT CATAGAAAAC TAAATTAAGA AGTCTAACAG AGTGAAAAAA AAGACTAAAA 121 GAAACAGAAT ATTTAAGAAA AAAATACAAT ATAGACATTA TTCTTATAAG ATTGATGTAT 181 ATATAGATGA AAAAATAAGT AAAAATTAGT ACATAACTCT CTGAGTTTTT ATCGACTCCT 241 TTCATATCCT ATCAAAATTC AAGAGTTTTC AGCATCTATT TTTACTATAG AATAAAAATA 301 ATAATCTTGA TAGGGGTTTC ATGAGATAAA GAAGTTGAAT TTATACAAAT AGAATAGAAG 361 GAATACCAAA AGATATCTTA AAGTTTAATT TAAATATTTG GAGGTTATGA ATATGAAAAG 421 ATGATAGTTA TGAATATTAA GAGTGTTGTG CGAAATTTGA GATAATACGA GAAAATATAT 481 AAACGCGAAA AACAAGACAA CAGATTTACG TGGTTCACCA ATAAATTGGC TACGTCCACG 541 GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA ATAGGGTTTG 601 CCATAGCGTC TATATATAGT GCTAAGCTAC GCCCTAAAAG GCTTGGGCCC AACATACAGA 661 ATCAACAGAA AATTAAGGGC CCAATACAAC AACATTGTAT ACCGTCGGCG CCGCGTCTCC 721 GCCCCCCCGG ACCCCCAGGC CAGCGCGTCG CCCCCCTGGA CCCCCCGACT CGCTGACCGG 781 GCAGCGAGAC CCCCGTCCTT TCTGTTTGTA GCGGGTCCGA TTCAAGGCAT TCAACATCCG 841 GCTTCACTTC TAACTCATTG GTAGATCTCA GTTGCCTCTT CACCAAGGCT GCCTGCCTCA 901 AAACCACATC ATAGACCATC TGTTCCGATG TCATCGTCCG TTCTCCAGAT GGAGTAGCCA 961 AAATAGCAGA CCGTACAGAA AATTTCCGTC CATTATTAGT TTGCTTTCCA CCACCTCTAT 1021 TGATTCTCTC ATTGGACACC AAATTCCTAT GCCTCGATGA ATCAAAAAAA CGGTTTCCCT 1081 CCCGGACTGA TTCCATGAAA CTTGTCCCAT TTGAGACGTC ACAAGGAGAA ACAACCCATA 1141 ACAAGGCAAC AGACATTCTG AGCAAGAAAA CCTTGGTTGT CTAAAACAAT TCCAAGATTT 1201 TTGTCTTTCT TTTTGTCACC TTCCAAACTT TACTTAGTTT ATAGAAAATA AATTACTCCT 1261 AGTAGATTCC CACTAGAGAA TATTTCCACT CTCAAACAAA ATTACCCACT TTCTCTTCTG 1321 TAGAAAAAGA TTATAAAAAG ACCACAGACA GGCAAACCAA CTTTTCCTCA CTCAAACAGG 1381 AGTAACCTGT TTCTTGACTT ACAAATTCCA CCCTCTCTTT CAACAATGGC CACTCTGAAT 1441 TTCTGTAATT GTATAGTCAC ACAAAGCGAA GTCAAAATTT AAAATTTAAA GTTTATGAAT 1501 TCTGAAAATT TCTAATATAT TTTAACTTAC TAAATTATTA CGAAGTTTGA CTAAAGTTAC 1561 GACTAAATGC GTAACTTACC CTCTAACTCC ACCCCCTGTA TATAACAAAA ACACTAGCAA 1621 AGCAATAGAA AGTTATAAAG ATTGCAACTT TACATATCAA GAAGTGAAGG GAAACAAACC 1681 TTTGTTTCAA GAAATCAAGA ATGGCCACTT CCAAGAATGG AGAATGCAAT TAGTTGGTTT 1741 TTTCTGCACT TTTT Predicted gene structure (within gDNA segment 16906 to 1904): Exon 1 16902 16870 ( 33 n); cDNA 140 170 ( 31 n); score: 0.636 Intron 1 16869 15211 (1659 n); Pd: 0.989 (s: 0), Pa: 0.000 (s: 0) Exon 2 15210 15175 ( 36 n); cDNA 171 205 ( 35 n); score: 0.667 Intron 2 15174 14725 ( 450 n); Pd: 0.920 (s: 0), Pa: 0.000 (s: 0.52) Exon 3 14724 14604 ( 121 n); cDNA 206 327 ( 122 n); score: 0.529 Intron 3 14603 14542 ( 62 n); Pd: 0.482 (s: 0.60), Pa: 0.582 (s: 0.54) Exon 4 14541 14493 ( 49 n); cDNA 328 376 ( 49 n); score: 0.531 Intron 4 14492 13484 (1009 n); Pd: 0.388 (s: 0.54), Pa: 0.620 (s: 0) Exon 5 13483 13476 ( 8 n); cDNA 377 384 ( 8 n); score: 0.625 Intron 5 13475 13379 ( 97 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 6 13378 13335 ( 44 n); cDNA 385 425 ( 41 n); score: 0.727 Intron 6 13334 11898 (1437 n); Pd: 0.000 (s: 0.73), Pa: 0.000 (s: 0.82) Exon 7 11897 11480 ( 418 n); cDNA 426 836 ( 411 n); score: 0.928 MATCH C01HBa0163B20.1- SGN-U314435- 0.839 709 0.404 C PGS_C01HBa0163B20.1-_SGN-U314435- (16902 16870,15210 15175,14724 14604,14541 14493,13483 13476,13378 13335,11897 11480) Alignment (genomic DNA sequence = upper lines): AAAATTCCTA CGACACACCT TATCTTTGAT GAGGTCCTAT TACCCCCTCC AACTTTTTTT 16843 |||| | | | | | || | ||| | | || || AAAAATAC-A ATATAGACAT TAT-TCTTAT AAG....... .......... .......... 170 TAAGTAATTT ATTACTCCTT TGCGTGCCTA CGTGGCAATA ATCGTGATTT CACCCATGTA 16783 .......... .......... .......... .......... .......... .......... 170 GGGTGCGTGA GTGCAGATTT TGGCTAACAA TGATCAATAA AAGTTAGCCA CGTGTCAAAG 16723 .......... .......... .......... .......... .......... .......... 170 CAATTTGAAA AAAAATTCAA AAATAAATTT TATTGTTTCT CTCAAAAGCA TTTCTTCTTC 16663 .......... .......... .......... .......... .......... .......... 170 CTCTTTTGAA AAAATAACTC CATTTTCATG GTTTTTCATC TTTGAAGAAG CTCCATCTAT 16603 .......... .......... .......... .......... .......... .......... 170 TATCATTCAA GTTAAATAGC TCCTTGATTT GAAAAGGTAA AGTAAAATTT AATATATTCT 16543 .......... .......... .......... .......... .......... .......... 170 TTACATCTTT TTATGTCGAT TATTAATTCT TATTTTTTTG ACAATGTTTA TAAAGTTAGG 16483 .......... .......... .......... .......... .......... .......... 170 GTTATGACAA AATCCGAGTT GAATAAGTTG TGTATGGATG AGAACGATTC AATGTTTAAC 16423 .......... .......... .......... .......... .......... .......... 170 GCGGAAGTGC GATGCAAGCA TAGAATCTTA CTGCAAATGC AGACGTCTTG GTCAAATCGC 16363 .......... .......... .......... .......... .......... .......... 170 AATCCCGGAA GACGATTTTG GTCTTGTCCT CACTATGAGG CCACAAACTG TAATTTCTTT 16303 .......... .......... .......... .......... .......... .......... 170 AGATGGAGAG ACACGTAGAG AGTCGATGAA AGATCTCGTT TTATTATTCC TAAATTGGTG 16243 .......... .......... .......... .......... .......... .......... 170 AATATGATTA ACGAGTTAGA AAAAAATTAT GAGTGTGTGA AGATGCAACT GGAACAACTT 16183 .......... .......... .......... .......... .......... .......... 170 GATAATTCCA ACATTGAACA GTCAAAGTTA AAGGACTAAA AAAATTATGA GCTTGTGAAG 16123 .......... .......... .......... .......... .......... .......... 170 ATGCAACTGG AACAGCTTGA TAATTCAGAC ATTGAACAGT TAAAGTTAAA GGACTAAAAA 16063 .......... .......... .......... .......... .......... .......... 170 CAACTAAGAG ACACAAATAA CATAGATAAA ATATGGCCAA AAAGATTTTT TCTTTTATTT 16003 .......... .......... .......... .......... .......... .......... 170 TAGGGTAATG CTAATTGCTA AACGGCTAGA AATTTGGCCA GAAATTTTAA AAATCTATAA 15943 .......... .......... .......... .......... .......... .......... 170 TTTTTTTTAT TTTAAAATAA ATTATTATTT TCTTCTTCTT ATTTTAATTA AAAAGTAAAA 15883 .......... .......... .......... .......... .......... .......... 170 GCTAAAAGGA TAAAATATTT AAAGATAAAA TTAAGTTAAT GGCGTGCGTG ACTGTTGTCT 15823 .......... .......... .......... .......... .......... .......... 170 AGAATCTCGA GGTCTAAGCT CTTTATTAAC TATAAAAACT GAAAAAAAGT AAAGCAGACT 15763 .......... .......... .......... .......... .......... .......... 170 TTTCCTCCCA AGAGAACAGT CAAAGATCCA AATATATCCT TTTGTCCTGT TGTTTTGACC 15703 .......... .......... .......... .......... .......... .......... 170 CATTTTCTTA TGGAGCCTAA GTATGATTTT TTGGTTGATA TTTTTTTGGT CGATTTTTAT 15643 .......... .......... .......... .......... .......... .......... 170 TTGTTATATT ATGTTTTTTA GAAAATTAGT TTGACTAATT TTTAGAGTTA AATTAAATTA 15583 .......... .......... .......... .......... .......... .......... 170 TATCAATTCA ATATGTTAAA TTAAAAAATA TATATATTCA AAAAGTATAT GAAAAGTATT 15523 .......... .......... .......... .......... .......... .......... 170 ATAAATTACA ATGTTTTACA TATTAATATG ACGAAAAATA TATCTAAAAA TATTAATAAA 15463 .......... .......... .......... .......... .......... .......... 170 AGATTTTATA ATTTGATTTT AAAAATAGAA ATCATAACAA ATAATAATAG ACGGACGGAG 15403 .......... .......... .......... .......... .......... .......... 170 TAGTTATGTT GCATGTTAGG GATAGAGGGA GTAATTGACT TACTTGCTAG CATTCGTGTC 15343 .......... .......... .......... .......... .......... .......... 170 TTAGAAATCT ACAAGAATAC AGCCATCTTT GTTCGAAATT TTGTTGTACT ATTTGTATTT 15283 .......... .......... .......... .......... .......... .......... 170 GCTTGAGAGA TTACATTGTC TAATAAGCGA GTTGGATAAA ATTTGAATGG ATAATGATGT 15223 .......... .......... .......... .......... .......... .......... 170 TAATAAATAC CCATTCGAAA GATATATGGG CTAAAACAAA ATTAAAATGT AAGTTATGAT 15163 ||| || |||||| | |||| | | | ||||| .......... ..ATT-GATG TATATATAGA TGAAAAAATA AGTAAAAA.. .......... 205 TTAACCTTCG ATTCTTATTA AGTTTGAATA TCTAATAAAA AATATTTTTT CAATTATAAT 15103 .......... .......... .......... .......... .......... .......... 205 TTTATACTCT CTCGACTACT ATTTATATGA TTCATTTCAG ATTTTGATAT TCAATCAAAT 15043 .......... .......... .......... .......... .......... .......... 205 TTATGTTTGA CCTAAATTTT TTATATATCT TTTAAATAAT TTGAGTTATC AATTACTCTG 14983 .......... .......... .......... .......... .......... .......... 205 ACTTACAGTA CTCTATTCAT TTAAATTTTT TTTTGTCTAA TTTGACTTGA AAAGAAATTT 14923 .......... .......... .......... .......... .......... .......... 205 AAGAAATGAA CGAAAACTTT TTAATTCTTT GATACTAAAC ATGTCCCTTG AAATGTTGAA 14863 .......... .......... .......... .......... .......... .......... 205 GTTAGAGCGT TGTAAAGAAA AGGTTATTTT TATTTAATCA GGCTAAAAAG AAAATTATAT 14803 .......... .......... .......... .......... .......... .......... 205 TATTCTTTTT GAAATGGATG AAATACTTGT TATATAGTTA ACAAATATAG AAATTTAATT 14743 .......... .......... .......... .......... .......... .......... 205 TCAAGAAATT TAAAAAATTT CATTCGCAAA TTTTTAAATT TTTAACAAAC TTAAATTAT- 14684 || | | || | | | | || |||| | || | | || .......... ........TT AGTACATAAC TCTCTGAGTT TTTATC-GAC TCCTTTCATA 246 TCAACTCATA AAAACAAAAT GTGTCA-CGT -AAATATAAA TATAAAAGTG AAAAAACAAA 14626 || ||| | || ||| | | ||| | | | | | | |||| || | |||| | || TCCTATCA-A AATTCAAGAG TTTTCAGCAT CTATTTTTAC TATAGAA-TA AAAATAATAA 304 ACTTGAAAG- GTTATACTCA GATGCTAGTA CCTTGTCGAA TACGTGAAAT AATTTAATTG 14567 ||||| || | | | | | ||| TCTTGATAGG GGTTTCATGA GAT....... .......... .......... .......... 327 CATTGAATAT GAACAAAACT TGTAGCATTG GGAGCTGTA- CAATAAAAAT ATCATAAAAG 14508 | | || || | ||| |||| | ||| ||| .......... .......... .....AA--A GAAGTTGAAT TTATACAAAT AGAATAGAAG 360 AGTTATCAAA A-ATAGGTAA CAAGCATTCA TTAGGGTTTG CAAATAAAAA TACCATTCCC 14449 || |||| | ||| GAATACCAAA AGATAT.... .......... .......... .......... .......... 376 TAATATTCAT CCACCATTTT CCCTTAGAAA ATGTCAAACA AATCCCCCAT TTTTCCTATT 14389 .......... .......... .......... .......... .......... .......... 376 GTTGAACCTC AACACTTCAG TGACTATGGC TTCGACCCTC AAATCCATTA TTTTCAGGTA 14329 .......... .......... .......... .......... .......... .......... 376 TATATTACAT TGTTATTACC TAAATTAAAA TTATATTATA GTAAGTGTTG AACCTCTTAT 14269 .......... .......... .......... .......... .......... .......... 376 TCGTATTTTT TCGTATGATT TGCTCATTCA TATTTTAAAT TTCTTAATAA AAATTGGTTC 14209 .......... .......... .......... .......... .......... .......... 376 ATCAATGCAA TTTTTGCTCT CCCCTGTTTT AATAGATTTT GGAAGAAGCA AGAAAACACA 14149 .......... .......... .......... .......... .......... .......... 376 AAATCAGAGA AACTGCGAGG TCATCCATAG ATACACTTCA CTTCAAGCTA CAGAAACCCA 14089 .......... .......... .......... .......... .......... .......... 376 TTTCAAAAGA TGAATCATCG AAGAAGATAA AAAAGAACAG TAGCCGTAAA AGATGGTGGA 14029 .......... .......... .......... .......... .......... .......... 376 AAAATGCTCT GCTTTTCTTC AAAAAGACCA AATCCAACAA TGAAAAATTC TACGGCGCCG 13969 .......... .......... .......... .......... .......... .......... 376 ACGGTGAAGT TCATCACCGG CGACCTAATT TTCAAGGATC GATTTCTGGG CCGGTATACA 13909 .......... .......... .......... .......... .......... .......... 376 TTACTGAGAG CAGAAGTGGG TCGAACACGC CTTACCGTAC AACAAGCCGG CCGTCCTCCG 13849 .......... .......... .......... .......... .......... .......... 376 GTCCACTCGC CGGAACTTTA ACTCCTAACC GGAAAGGTGA TTTGGAGATC CCCTACATTA 13789 .......... .......... .......... .......... .......... .......... 376 ACCTCAGGGA GTTTAACATG GACCAGCAGC AGCAGCATAA GATCTGTACA GCCTCGCCTA 13729 .......... .......... .......... .......... .......... .......... 376 TGCCAATATA TTTGGTCACG TGAACAGAGC AGTATTTAAT TAATTAAATT GATAATTTTA 13669 .......... .......... .......... .......... .......... .......... 376 AGTGTTACTG CTAATTAATT ACTCTTATTA TCCTAATTTA GACCTTTTTA GGGTTTCAAA 13609 .......... .......... .......... .......... .......... .......... 376 TTACTTGAAA GTTGATGACC CATGGGTATC CTCTTTTAGT TCTTTGAATT ATGTGCAACT 13549 .......... .......... .......... .......... .......... .......... 376 TTCTTTTATG TAAAAGTGCT TTAATATTGA TGGCATGTAA CAACTTTTTT CTTGTAAATT 13489 .......... .......... .......... .......... .......... .......... 376 GTCAGCAGAC AGTATGGATT TTCTTGCAGC CTATTGTAAT GAACTGCTAC AAACATGCCT 13429 | | ||| .....CTTAA AGT....... .......... .......... .......... .......... 384 TTTTGCTTTG ACCATGTTAC TCACTTTTGA TAGCGGAGCC AAATTTTTTA TTGATTTGAT 13369 || |||| | .......... .......... .......... .......... .......... TTAATTT-AA 393 ATATTTAGAA GCTTGTTGAA TATGATATCA CGATATGAAA TTATAATATG GTATTATGAT 13309 |||||| | | | || |||| ||||| | | ||| ATATTT-GGA GGTT-ATGAA TATGAAAAGA TGAT...... .......... .......... 425 ATAGAAATTG AAGTTTCGTT TGGACATGCG ATATGAAATT TTAGTGTTGT ATATTTTTTC 13249 .......... .......... .......... .......... .......... .......... 425 ATAAACATAA AAATCTCATA AATTCTAAAA ATATTATAAA ATAAACAAAG AATCATAAAA 13189 .......... .......... .......... .......... .......... .......... 425 TCGTATAATA AATTATTATA AAGTTATTTG TTTTTAACTT AAGTAATTGT TTCATCAGTA 13129 .......... .......... .......... .......... .......... .......... 425 TATTTGAGTA AAAATGAAAT ACCTTTCACC GACTTTTCAA GATTTTATTA TCAACAATCG 13069 .......... .......... .......... .......... .......... .......... 425 TGAAGTGTGA GTTAAAGTGA TTATATATTG GTGAGAATAA TAAATTATAA AAATTAATAA 13009 .......... .......... .......... .......... .......... .......... 425 TGTGATTATA AATTTATTTA TATGTAAAAC AAATTGTTAG TAAATATAAA TGTGGATATT 12949 .......... .......... .......... .......... .......... .......... 425 TTTAACAAAA TGTAAACTTG TGAGTCAATT TTTGTATTAA AATAACTCAA ATAATGACAT 12889 .......... .......... .......... .......... .......... .......... 425 GATATTCAAT ATGATTCCAA ATTATGGTTT TTGAAGGATA TGATATCATA TCATGAGATG 12829 .......... .......... .......... .......... .......... .......... 425 GAATCAGTGT AAAATCGCAC ATCCAAACGC TAATTCCATT TCACGATACC ATATCGTGAT 12769 .......... .......... .......... .......... .......... .......... 425 ATAATATCAC ATAATCAAAT GCCTATTTAA TCTAAATTAA ATAAGATAAT GAGGCATTAT 12709 .......... .......... .......... .......... .......... .......... 425 TTGTAGTGCT CAAACAAAAA ACTACATGTT AGAGAATGAA TTAGTAAACA AAATTTCAGA 12649 .......... .......... .......... .......... .......... .......... 425 TTAGCTAAAT AGTTGTACAA GTGATGGACC ACATGTATAT GAATTGATGC CCAATTTTTA 12589 .......... .......... .......... .......... .......... .......... 425 GGGGAAGCCT CGATGTTTGT CTTGATATAA ACTATTATTA GTGACCGTTT GGTTGTGGGG 12529 .......... .......... .......... .......... .......... .......... 425 TCTCACTCGC TTGTGGATAT TTATGACTTA CATCATTATC TCATTTGTGT TTATTTTCAC 12469 .......... .......... .......... .......... .......... .......... 425 TGTAGCAAAA GCAGTGGAGT AAACATTGAG GGAGTTGGCA AGGCAAACTG CATGTGATTC 12409 .......... .......... .......... .......... .......... .......... 425 TCAGGCCCTC CAAAAAAAAA AAACATTAGA GGGGTATATG GTCGGGTTAG ATTGGATCTT 12349 .......... .......... .......... .......... .......... .......... 425 TTAAATATTA AATTAAATTA AATTATTTTT GTTAGATTTT AAATTTATAG GTCAAATCAA 12289 .......... .......... .......... .......... .......... .......... 425 ATCAATATAA TTAGGGTTTT CAATCTAGAG TTTTTTTTAA TTTAATTTTT TTTTAATAAA 12229 .......... .......... .......... .......... .......... .......... 425 GTATGCATAT ACACATATAA TTTACTTGTG CTTTAAATTT TTCTTTAGTC CTATTAAAAT 12169 .......... .......... .......... .......... .......... .......... 425 AAAACTATCT AAGGTGTTTC TTAAGAAATA ACACAAAATA TGATATGATT AATGACACAC 12109 .......... .......... .......... .......... .......... .......... 425 TAGAATATTT CAAATAATAA TAATAATAAT AATGAAATCG CGTAAAAAAA TATTACAAAT 12049 .......... .......... .......... .......... .......... .......... 425 TAACAAATCA TAATGAAAAT AATTATAATT TAAAAGTACT AAATCATGCT AAAATAAGTT 11989 .......... .......... .......... .......... .......... .......... 425 TAATAAATAT TACTTACTTG GCTAAATATT AAAGGAAATT AAAATTAGAT TATGTATTTT 11929 .......... .......... .......... .......... .......... .......... 425 AATTGTCTAA ATCAATGTAA AATCAAAGAA GAAATATTTA ATATTATTGT CTGTTGTGCG 11869 | || | | |||||| | ||||||||| .......... .......... .......... .AGTTA-TGA ATATTA-AGA GTGTTGTGCG 452 GAATTTGAGA TAATACGAGA AAAT--ATAA ACGCGAAAAA CAAGACAACA GATTTACGTG 11811 ||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| AAATTTGAGA TAATACGAGA AAATATATAA ACGCGAAAAA CAAGACAACA GATTTACGTG 512 GTTCACCAAT AAATTGGCTA CGTCCACGGG AAGAGAGGGA GCAGTTTTAT TATGGAGAGG 11751 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GTTCACCAAT AAATTGGCTA CGTCCACGGG AAGAGAGGGA GCAATTTTAT TATGGAGAGG 572 CAAAAACAGA ATTACAGAAT AGGGTTTCCC ATAGCGTCTA TATATAGTGC TAAGCTACGC 11691 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| CAAAAACAGA ATTACAGAAT AGGGTTTGCC ATAGCGTCTA TATATAGTGC TAAGCTACGC 632 CCTAACAGGC TTGGGCCCAA CATACAGAAT CAACAGAAAA TTAAGGGCCC AATACAACAA 11631 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTAAAAGGC TTGGGCCCAA CATACAGAAT CAACAGAAAA TTAAGGGCCC AATACAACAA 692 CATTGTATAC CGTCGGGCCG GGGGCGGAGA CGCCCCCCCG GACCCCCAGG CCAGGGGGCG 11571 |||||||||| |||| || | | ||| |||||||||| |||||||||| ||| ||| CATTGTATAC CGTC-GG-C- GCCGCGTCTC CGCCCCCCCG GACCCCCAGG CCA----GCG 745 CGTCGCCCCC CTGGACCCCC CGACTCGCTG ACCGGGCAGC GAGACCCCCG TCCTTTCTGT 11511 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTCGCCCCC CTGGACCCCC CGACTCGCTG ACCGGGCAGC GAGACCCCCG TCCTTTCTGT 805 TTGTAGCGGG TCCGATTCAA GGCATTCAAC A 11480 |||||||||| |||||||||| |||||||||| | TTGTAGCGGG TCCGATTCAA GGCATTCAAC A 836 hqPGS_C01HBa0163B20.1-_SGN-U314435- (13378 13335,11897 11480) ******************************************************************************** EST sequence 44 +strand 414 n (File: SGN-U325666+) 1 ATGGTGTTCT TTGCGCGTTT GGTGGGACGT TTTGATGTGG CTGATGAAGT TACCCCAGTC 61 AACATTGATA ATTTTGAGTG AGGTATACAA CCCCCGGATG CTCTTTGCCA TAATAGGTTG 121 TTCAATACCT GTTTGCCGTA ACTAGGAAAA TTTTGATGAT GGAGAGAGAA GAACCAAGAT 181 GATCTAATTT TCCGGGGTGG TAAATCGGCA ATGATCAGAA TTTAAAAGTA CTAAATCATT 241 CTAAAATAAG TTTAATAAGC ATTAGAAGGA AATTAAAATT AAATTATGTA TTTCCCTTGT 301 CTAAATCAAT GTAAAATCAA AGAACAAATA TTTAATATTA TTGTCATTCT TAATGTTATA 361 TTGATTTCCC TTTTGCCTTA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 14802 to 10578): Exon 1 12462 12456 ( 7 n); cDNA 224 230 ( 7 n); score: 0.857 Intron 1 12455 11991 ( 465 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.60) Exon 2 11990 11878 ( 113 n); cDNA 231 345 ( 115 n); score: 0.788 PPA cDNA 380 414 MATCH C01HBa0163B20.1- SGN-U325666+ 0.788 120 0.290 C PGS_C01HBa0163B20.1-_SGN-U325666+ (12462 12456,11990 11878) Alignment (genomic DNA sequence = upper lines): AAAAGCAGTG GAGTAAACAT TGAGGGAGTT GGCAAGGCAA ACTGCATGTG ATTCTCAGGC 12403 ||||| | AAAAGTA... .......... .......... .......... .......... .......... 230 CCTCCAAAAA AAAAAAACAT TAGAGGGGTA TATGGTCGGG TTAGATTGGA TCTTTTAAAT 12343 .......... .......... .......... .......... .......... .......... 230 ATTAAATTAA ATTAAATTAT TTTTGTTAGA TTTTAAATTT ATAGGTCAAA TCAAATCAAT 12283 .......... .......... .......... .......... .......... .......... 230 ATAATTAGGG TTTTCAATCT AGAGTTTTTT TTAATTTAAT TTTTTTTTAA TAAAGTATGC 12223 .......... .......... .......... .......... .......... .......... 230 ATATACACAT ATAATTTACT TGTGCTTTAA ATTTTTCTTT AGTCCTATTA AAATAAAACT 12163 .......... .......... .......... .......... .......... .......... 230 ATCTAAGGTG TTTCTTAAGA AATAACACAA AATATGATAT GATTAATGAC ACACTAGAAT 12103 .......... .......... .......... .......... .......... .......... 230 ATTTCAAATA ATAATAATAA TAATAATGAA ATCGCGTAAA AAAATATTAC AAATTAACAA 12043 .......... .......... .......... .......... .......... .......... 230 ATCATAATGA AAATAATTAT AATTTAAAAG TACTAAATCA TGCTAAAATA AGTTTAATAA 11983 | ||| | .......... .......... .......... .......... .......... ..CTAAATCA 238 ATAT-TACTT ACTTGGCTAA ATATTA-AAG GAAATTAAAA TTAGATTATG TATTTTAATT 11925 | | | | | || ||| |||| ||| |||||||||| ||| |||||| ||||| || TTCTAAAATA AGTTTAATAA GCATTAGAAG GAAATTAAAA TTAAATTATG TATTTCCCTT 298 GTCTAAATCA ATGTAAAATC AAAGAAGAAA TATTTAATAT TATTGTC 11878 |||||||||| |||||||||| |||||| ||| |||||||||| ||||||| GTCTAAATCA ATGTAAAATC AAAGAACAAA TATTTAATAT TATTGTC 345 hqPGS_C01HBa0163B20.1-_SGN-U325666+ (11990 11878) ******************************************************************************** EST sequence 36 +strand 867 n (File: SGN-U322683+) 1 TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 61 CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 121 CCATTATTTT CAGATTTTGG AAGAAGCAAG AAAACACAAA ATCAGAGAAA CTGCGAGGTC 181 ATCCATAGAT ACACTTCACT TCAAGCTACA GAAACCCATT TCAAAAGATG AATCATCGAA 241 GAAGATAAAA AAGAACAGTA GCCGTAAAAG ATGGTGGAAA AATGCTCTGC TTTTCTTCAA 301 AAAGACCAAA TCCAACAATG AAAAATTCTA CGGCGCCGAC GGTGAAGTTC ATCACCGGCG 361 ACCTAATTTT CAAGGATCGA TTTCTGGGCC GGTATACATT ACTGAGAGCA GAAGTGGGTC 421 GAACACGCCT TACCGTACAA CAAGCCGGCC GTCCTCCGGT CCACTCGCCG GAACTTTAAC 481 TCCTAACCGG AAAGGTGATT TGGAGATCCC CTACATTAAC CTCAGGGAGT TTAACATGGA 541 CCAGCAGCAG CAGCATAAGA TCTGTACAGC CTCGCCTATG CCAATATATT TGGTCACGTG 601 AACAGAGCAG TATTTAATTA ATTAAATTGA TAATTTTAAG TGTTACTGCT AATTAATTAC 661 TCTTATTATC CTAATTTAGA CCTTTTTAGG GTTTCAAATT ACTTGAAAGT TGATGACCCA 721 TGGGTATCCT CTTTTAGTTC TTTGAATTAT GTGCAACTTT CTTTTATGTA AAAGTGCTTT 781 AATATTGATG GCATGTAACA ACTTTTTTCT TGTAAATTGT CAGCAGACAG TATGGATTTT 841 CTTGCAGCCT ATTGTAAGAA AAAAAAA Predicted gene structure (within gDNA segment 15064 to 12740): Exon 1 14464 14332 ( 133 n); cDNA 1 133 ( 133 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 (s: 1.00), Pa: 0.980 (s: 1.00) Exon 2 14173 13446 ( 728 n); cDNA 134 861 ( 728 n); score: 0.997 MATCH C01HBa0163B20.1- SGN-U322683+ 0.998 861 0.993 C PGS_C01HBa0163B20.1-_SGN-U322683+ (14464 14332,14173 13446) Alignment (genomic DNA sequence = upper lines): TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 14405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 60 CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 14345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 120 CCATTATTTT CAGGTATATA TTACATTGTT ATTACCTAAA TTAAAATTAT ATTATAGTAA 14285 |||||||||| ||| CCATTATTTT CAG....... .......... .......... .......... .......... 133 GTGTTGAACC TCTTATTCGT ATTTTTTCGT ATGATTTGCT CATTCATATT TTAAATTTCT 14225 .......... .......... .......... .......... .......... .......... 133 TAATAAAAAT TGGTTCATCA ATGCAATTTT TGCTCTCCCC TGTTTTAATA GATTTTGGAA 14165 ||||||||| .......... .......... .......... .......... .......... .ATTTTGGAA 142 GAAGCAAGAA AACACAAAAT CAGAGAAACT GCGAGGTCAT CCATAGATAC ACTTCACTTC 14105 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCAAGAA AACACAAAAT CAGAGAAACT GCGAGGTCAT CCATAGATAC ACTTCACTTC 202 AAGCTACAGA AACCCATTTC AAAAGATGAA TCATCGAAGA AGATAAAAAA GAACAGTAGC 14045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTACAGA AACCCATTTC AAAAGATGAA TCATCGAAGA AGATAAAAAA GAACAGTAGC 262 CGTAAAAGAT GGTGGAAAAA TGCTCTGCTT TTCTTCAAAA AGACCAAATC CAACAATGAA 13985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTAAAAGAT GGTGGAAAAA TGCTCTGCTT TTCTTCAAAA AGACCAAATC CAACAATGAA 322 AAATTCTACG GCGCCGACGG TGAAGTTCAT CACCGGCGAC CTAATTTTCA AGGATCGATT 13925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTCTACG GCGCCGACGG TGAAGTTCAT CACCGGCGAC CTAATTTTCA AGGATCGATT 382 TCTGGGCCGG TATACATTAC TGAGAGCAGA AGTGGGTCGA ACACGCCTTA CCGTACAACA 13865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGGCCGG TATACATTAC TGAGAGCAGA AGTGGGTCGA ACACGCCTTA CCGTACAACA 442 AGCCGGCCGT CCTCCGGTCC ACTCGCCGGA ACTTTAACTC CTAACCGGAA AGGTGATTTG 13805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCGGCCGT CCTCCGGTCC ACTCGCCGGA ACTTTAACTC CTAACCGGAA AGGTGATTTG 502 GAGATCCCCT ACATTAACCT CAGGGAGTTT AACATGGACC AGCAGCAGCA GCATAAGATC 13745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCCCCT ACATTAACCT CAGGGAGTTT AACATGGACC AGCAGCAGCA GCATAAGATC 562 TGTACAGCCT CGCCTATGCC AATATATTTG GTCACGTGAA CAGAGCAGTA TTTAATTAAT 13685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACAGCCT CGCCTATGCC AATATATTTG GTCACGTGAA CAGAGCAGTA TTTAATTAAT 622 TAAATTGATA ATTTTAAGTG TTACTGCTAA TTAATTACTC TTATTATCCT AATTTAGACC 13625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATTGATA ATTTTAAGTG TTACTGCTAA TTAATTACTC TTATTATCCT AATTTAGACC 682 TTTTTAGGGT TTCAAATTAC TTGAAAGTTG ATGACCCATG GGTATCCTCT TTTAGTTCTT 13565 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTAGGGT TTCAAATTAC TTGAAAGTTG ATGACCCATG GGTATCCTCT TTTAGTTCTT 742 TGAATTATGT GCAACTTTCT TTTATGTAAA AGTGCTTTAA TATTGATGGC ATGTAACAAC 13505 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATTATGT GCAACTTTCT TTTATGTAAA AGTGCTTTAA TATTGATGGC ATGTAACAAC 802 TTTTTTCTTG TAAATTGTCA GCAGACAGTA TGGATTTTCT TGCAGCCTAT TGTAATGAA 13446 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| || TTTTTTCTTG TAAATTGTCA GCAGACAGTA TGGATTTTCT TGCAGCCTAT TGTAAGAAA 861 hqPGS_C01HBa0163B20.1-_SGN-U322683+ (14464 14332,14173 13446) ******************************************************************************** EST sequence 21 +strand 1423 n (File: SGN-U318569+) 1 TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 61 ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 121 ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 181 TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 241 ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 301 TTGTTGTTTT CATGGTGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 361 GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 421 TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TTTGGAACAG GCGGTTCTCA 481 GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 541 TTTGTTTATC GGAATTTGAG GAGAATGAAA AGGGTCGGGT TTTACCCAAG TGTAATCACT 601 CTTTTCATTC GGAATGTATT GATATGTGGT TTCATTCTCA TTCTACGTGC CCTCTTTGTC 661 GCTCTCCGGT GGAGGCAGTA CTTATCGGAC CGGATATTAA CCGGGTTGAG GTGGCGGTAA 721 CAGTGAACGA ACCGGGTTCG AGTTCGGGTT GTGAGGAGAA TAGTAGTCAT CATTCTAATA 781 TGACGCCGTT GGGTTGCCGG CGAAAAGGAT TGGATCTGAC CGGAGTAAGA ATAGAGGTAC 841 CAAGAAGGAA CGATTTCGAA GCCGATTTGG AAATGGGAGT GAGAGTAAGT TCACCGGCGA 901 TTCAATCGAG ATCACCAGCG ACTCGTTTAA TGTCTTTGAG AAGAATCCTA AGTATGAACA 961 GAAAAACACC CACCGGAACT AGCCATTCTC CTAGTGGAAG TTGCGCCGCG GATTTTGATA 1021 TAGAAACCGG CGGTAGTAGT GGTGGTGGAA AAATTCAAGT CGGCGGCGAA CGCATCACAA 1081 CTCCGTGAGT TAAAAATGCG GGCACACATC CCTAGGCAAA AGCTGAAAAA TATTGAGTCA 1141 CGCCGATTGC GTGAAAACAG GAGAAACAGT GACTTGACTG ACAGAAAAGT CCTATGACAC 1201 GTGGCAATTG CTGAGTGATT CACCTTTTAC AAGGCAGTCA TAGTAGACTT TGAGGGGGGA 1261 ATGTTTGACT TGTAAATTAA TGGTAGGATT AGAAAAATGC AAAGTTGTAA AGCGTTACGT 1321 GCAAGAGTCA ATTACAATGT GTCTATTCTA AATTCGTTGA ATTTTTTTTC CCTATTATAA 1381 AGTATTTGAT AAACGTTGGT TCCAAAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 35752 to 38562): Exon 1 36352 37752 (1401 n); cDNA 1 1403 (1403 n); score: 0.996 PPA cDNA 1404 1423 MATCH C01HBa0163B20.1+ SGN-U318569+ 0.996 1401 0.985 C PGS_C01HBa0163B20.1+_SGN-U318569+ (36352 37752) Alignment (genomic DNA sequence = upper lines): TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 36411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 60 ATATATATAT ATAT--ATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 36469 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 120 ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 36529 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 180 TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 36589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 240 ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 36649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 300 TTGTTGTTTT CATGGTGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 36709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGTTTT CATGGTGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 360 GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 36769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 420 TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TTTGGAACAG GCGGTTCTCA 36829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TTTGGAACAG GCGGTTCTCA 480 GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 36889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 540 TTTGTTTATC GGAATTTGAG GAGAATGAAA AGGGTCGGGT TTTACCCAAG TGTAATCACT 36949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTTATC GGAATTTGAG GAGAATGAAA AGGGTCGGGT TTTACCCAAG TGTAATCACT 600 CTTTTCATTC GGAATGTATT GATATGTGGT TTCATTCTCA TTCTACGTGC CCTCTTTGTC 37009 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTCATTC GGAATGTATT GATATGTGGT TTCATTCTCA TTCTACGTGC CCTCTTTGTC 660 GCTCTCCGGT GGAGGCAGTA CTTATCGGAC CGGATATTAA CCGGGTTGAG GTGGCGGTAA 37069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTCCGGT GGAGGCAGTA CTTATCGGAC CGGATATTAA CCGGGTTGAG GTGGCGGTAA 720 CAGTGAACGA ACCGGGTTCG AGTTCGGGTT GTGAGGAGAA TAGTAGTCAT CATTCTAATA 37129 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTGAACGA ACCGGGTTCG AGTTCGGGTT GTGAGGAGAA TAGTAGTCAT CATTCTAATA 780 TGACGCCGTT GGGTTGCCGG CGAAAAGGAT TGGATCTGAC CGGAGTAAGA ATAGAGGTAC 37189 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACGCCGTT GGGTTGCCGG CGAAAAGGAT TGGATCTGAC CGGAGTAAGA ATAGAGGTAC 840 CAAGAAGGAA CGATTTCGAA GCCGATTTGG AAATGGGAGT GAGAGTAAGT TCACCGGCGA 37249 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGAAGGAA CGATTTCGAA GCCGATTTGG AAATGGGAGT GAGAGTAAGT TCACCGGCGA 900 TTCAATCGAG ATCACCAGCG ACTCGTTTAA TGTCTTTGAG AAGAATCCTA AGTATGAACA 37309 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATCGAG ATCACCAGCG ACTCGTTTAA TGTCTTTGAG AAGAATCCTA AGTATGAACA 960 GAAAAACACC CACCGGAACT AGCCATTCTC CTAGTGGAAG TTGCGCCGCG GATTTTGATA 37369 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAACACC CACCGGAACT AGCCATTCTC CTAGTGGAAG TTGCGCCGCG GATTTTGATA 1020 TAGAAACCGG CGGTAGTAGT GGTGGTGGAA AAATTCAAGT CGGCGGCGAA CGCATCACAA 37429 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGAAACCGG CGGTAGTAGT GGTGGTGGAA AAATTCAAGT CGGCGGCGAA CGCATCACAA 1080 CTCCGTGAGT TAAAAATGCG GGCACACATC CCTAGGCAAA AGCTGAAAAA TATTGAGTCA 37489 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGTGAGT TAAAAATGCG GGCACACATC CCTAGGCAAA AGCTGAAAAA TATTGAGTCA 1140 CGCCGATTGC GTGAAAACAG GAGAAACAGT GACTTGACTG ACAGAAAAGT CCTATGACAC 37549 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCCGATTGC GTGAAAACAG GAGAAACAGT GACTTGACTG ACAGAAAAGT CCTATGACAC 1200 GTGGCAATTG CTGAGTGATT CACCTTTTAC AAGGCAGTCA TAGTAGACTT TGAGGGGGGA 37609 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAATTG CTGAGTGATT CACCTTTTAC AAGGCAGTCA TAGTAGACTT TGAGGGGGGA 1260 ATGTTTGACT TGTAAATTAA TGGTAGGATT AGAAAAATGC AAAGTTGTAA AGCGTTACGT 37669 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTTTGACT TGTAAATTAA TGGTAGGATT AGAAAAATGC AAAGTTGTAA AGCGTTACGT 1320 GCAAGAGTCA ATTACAATGT GTCTATTCTA AATTCGTTGA ATTTTTTTTC CCTATTATAA 37729 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAGAGTCA ATTACAATGT GTCTATTCTA AATTCGTTGA ATTTTTTTTC CCTATTATAA 1380 AGTATTTGAT AAACGTTGGT TCC 37752 |||||||||| |||||||||| ||| AGTATTTGAT AAACGTTGGT TCC 1403 hqPGS_C01HBa0163B20.1+_SGN-U318569+ (36352 37752) ******************************************************************************** EST sequence 37 -strand 889 n (File: SGN-U343802-) 1 TGCGAAAGTA GAATATAAAG TGCTAAAATA TGNAGTGCCT AGGTATATAC AAAAATAAAT 61 ATTTCATGAG TACTTCCCCG ACGTCTTAAA ATTTAGACTT CAATATAAAT TCGACCATCC 121 AATAGATGAA AAATATATAA ATTNCAANCA ATNNCTTCAT AGTGTGCTTC CCTCGACAAT 181 GTTGTTTGTT GTCAAAATCT AATTAAATAA TTTGAACTCT AATATAAATA TTGAAAAGAT 241 CAGGTAAAAA ATTAAATAAA ATACTTCATA GAGTGCTTCC CTCTGATGTG TTTCTCGATG 301 GAGAATATGT GAATCAGTTA GACTCCAGTT TAAAAATTGA ACATAGTAGA TAAAATATAA 361 ATAAAATACA AACAAATACT TTATAAAATG CTTCCCTCTA ATGTGTTGCT TGGTGCCTGA 421 TAGAATAAAT GCCTTCACTT ATAAGTCAAT GACCCAGTTC ACTTGACACA CTAAAAAGTA 481 TGAACAGAAA GTAAATGCAG TTTAAACAAC ACAACATTTT ACGTGGAAAC CTCCTTGCTT 541 AAGGGAGTAA AACCACGACT TGTCTCACAG GATTTTCAAT CGTTTTCACT AATCTTCACA 601 AGCAAAAGTG AAACACGATT ACAACAAATA TGAGAAAAAG TTTTTAATCT CACGTTCAAG 661 CAATATTCTC TATTGCTTTA CAAGCCTAAG TAGAAATGAA TCTACCCACT AAGCTATACC 721 ACATAGACAA CTTACAATTT AAACACTACC CACTGATTCC TTTATAGTTT CAGGAATAGT 781 TTATAATGTA AGACCAAGAG ATTATATTCC TAAGCAACCC TCGTGCCGAA TTCCTGCAGC 841 CCGGGGGATC CACTAGTTCT AGAGCGGCCG CCACCGCGGT GAGCTCCAG Predicted gene structure (within gDNA segment 38433 to 47875): Exon 1 39250 39297 ( 48 n); cDNA 329 374 ( 46 n); score: 0.729 Intron 1 39298 41072 (1775 n); Pd: 0.000 (s: 0.73), Pa: 0.789 (s: 0.51) Exon 2 41073 41115 ( 43 n); cDNA 375 417 ( 43 n); score: 0.512 Intron 2 41116 44093 (2978 n); Pd: 0.000 (s: 0.51), Pa: 0.000 (s: 0.77) Exon 3 44094 44496 ( 403 n); cDNA 418 818 ( 401 n); score: 0.818 MATCH C01HBa0163B20.1+ SGN-U343802- 0.818 494 0.556 C PGS_C01HBa0163B20.1+_SGN-U343802- (39250 39297,41073 41115,44094 44496) Alignment (genomic DNA sequence = upper lines): TTTCAAAATG GAAAAAAGAA AACGAGAATA TAAATAATAA CAAATACAAA AGAGTGTTGA 39309 ||| ||||| ||| | || | | | |||| ||||||| || | | ||| TTTAAAAATT GAACATAGTA GA-TAAAATA TAAATAA-AA TACAAACA.. .......... 374 TCAATTTTTC ATTTTTCTTC TAACAAATAT TGATGTCGGA ATATCAATTA AATAATTAAA 39369 .......... .......... .......... .......... .......... .......... 374 AATTCTCCTT CAGGTTTATT TCCCCATCTT TTGTAGGATA GAGTACTTGA TCCTCCATGT 39429 .......... .......... .......... .......... .......... .......... 374 CAATAATGAT TCCTTAAGAA AAGCTTTTGA ACTTTATGTT ATGTATTTAT TATTTACATT 39489 .......... .......... .......... .......... .......... .......... 374 TGTAATCTAT TTTTTACACG TTAAATAAAT ATTTTTAAAA AAATATATAA AGATAAAAAA 39549 .......... .......... .......... .......... .......... .......... 374 CTCGAGATAT ATGAATAATA TTTAAGAATA AAGTTATAAA AAATCGATAT AAAGAGATAT 39609 .......... .......... .......... .......... .......... .......... 374 AAGTTACAAA CAATCTATCT GTATTATTCT ATTAGACATA CAAAAATATT ATTCATTATA 39669 .......... .......... .......... .......... .......... .......... 374 TATATATTGG TTTTATCTGT AAAAGTAAAT AAATGAACAA AGAAAAAAAG GGAGAAAAGT 39729 .......... .......... .......... .......... .......... .......... 374 AAAATAAATA AATAAATAAA TAGTATTATT TAAGTGCATT AAATGTGTCA CATTATTTTT 39789 .......... .......... .......... .......... .......... .......... 374 TCAAAGACTA CAATTAAATA ATATATAGAC TATAGATTTT ATTAATTATA TTGCTAATTA 39849 .......... .......... .......... .......... .......... .......... 374 AGACAAGAAA AAAAAAACTA CACTATTACA TTTATATTAC TAAGAAAGAA AAGAAAAGAA 39909 .......... .......... .......... .......... .......... .......... 374 TTATGATACT TTTTCAAGGA AAATAACAAC GTAAACGTGA TGTTACGTAC ACAATAAAAT 39969 .......... .......... .......... .......... .......... .......... 374 AAAATAAAAT AAACAATCAC ATTATGTAAT AAAATTATTT TATTCTTTAA TTTTCTCTTT 40029 .......... .......... .......... .......... .......... .......... 374 CGAAAATAAT AAAAACGAAA CTCATCATTA TAATTTTTTA ATATTGAACT AATATAATTA 40089 .......... .......... .......... .......... .......... .......... 374 TATTAATTAT ATACTTCATG ATAAAAATAG AATTGTAGGA CCAAATGGAC AAGTATGTCT 40149 .......... .......... .......... .......... .......... .......... 374 ATGTGTAGCT AAGTTACTAT TACAAGCCAA AATAAATAAA ATCTCAACCA GTAAGAATAC 40209 .......... .......... .......... .......... .......... .......... 374 TCATCTAATA CATCACCCAA TAAAAATACT CTACTTTGAA GATTTCGTTA AAAATAAATT 40269 .......... .......... .......... .......... .......... .......... 374 ATTTTTTAAT TAAGACGATT CAAATTTCAA ATTTCTTATT TAAAAATGAA AAACTACTTA 40329 .......... .......... .......... .......... .......... .......... 374 TCAACTCATC ATTATCCATG TTGGCTACTT TTTGTTGTCA CTCACGAGAA CAATAAAGAT 40389 .......... .......... .......... .......... .......... .......... 374 CAATAAAAAA ATGTGCAAAA TAGAATCTAA ACAGATAGGA AGAGGTAAGG ATTCCTTATA 40449 .......... .......... .......... .......... .......... .......... 374 ATAAAAAGAT AAATATTCCT AAAGTTAATA ATGGAGTATT AATTATATTA AGTGTCACTT 40509 .......... .......... .......... .......... .......... .......... 374 ATATGCATGA AAATTTTCTT AATTGTCAAC ACCGTGTCCA ATAATTGTAT GTCAACTCAT 40569 .......... .......... .......... .......... .......... .......... 374 CAGAAACACG TTAACATTAA ATAAATTGTA GGTGCAATTT TATAGTAATC CAAACAAATA 40629 .......... .......... .......... .......... .......... .......... 374 TTGGTACCGT TGAGTTTATT ACTCTAGTAT AGCACTAATA AATAAATATG AATATTGCAA 40689 .......... .......... .......... .......... .......... .......... 374 ATTACTTACT CCACTTTAAA AGAAAAAATA ACCAGACTCA TGATCTGCCT AAATACTCGT 40749 .......... .......... .......... .......... .......... .......... 374 GGATTTCTTT GAACTATTTC AATATTTGGT TCTTACACAT TTTGATTTGT TTTAGCTAAT 40809 .......... .......... .......... .......... .......... .......... 374 CCTTTTTACA TTAATATTAA GCCTATTATA TTCTTATTCT AAGTACGGGT CCAAATCGCT 40869 .......... .......... .......... .......... .......... .......... 374 AATAATATTG TCCGATATAG ATCTTAATCC ACACAACTTT CAAACCAATG GCGTAGCCAC 40929 .......... .......... .......... .......... .......... .......... 374 ACTTGTGTCA AGGTGTCCAA CAATTGGACA CCCTTCGTCG GAATATTATA CCGTATATAC 40989 .......... .......... .......... .......... .......... .......... 374 AAGTAAAATG ATAAATTAAG TGACTAAATA ATATATTTTG GACACCCTTG ACACAACAAT 41049 .......... .......... .......... .......... .......... .......... 374 ATGATGTAAT CTAATGGTTT TAGACGCCTT GACACAACAA TATGATGTAA TGTAGTGATT 41109 | ||| | | || | | ||| ||| || || .......... .......... ...AATACTT TATAAAATGC TTCCCTCTAA TGTGTTGCTT 411 TCAGACGCCT GAAAGAGTAA AGATACACAA ATTTAAAGCG TTTGTGTGTT TGAATTTCAC 41169 | | GGTGCC.... .......... .......... .......... .......... .......... 417 TAGTAGTAAT TTTTTTCACT TTTTAGTAAG AGCAAATTTA CTTTAGCACT TGAACACCCT 41229 .......... .......... .......... .......... .......... .......... 417 TTGTAAAATT CCGACTTCGC CACTATTTCA AACACATCAC TAGTGGATAA AGCCTGATAT 41289 .......... .......... .......... .......... .......... .......... 417 ACTCAATATC TAGCTCGTGT ATTTGCCGAA ATAAGACTTC TTATTCCTAT ATTAAATCGC 41349 .......... .......... .......... .......... .......... .......... 417 GGCGTCACAT CGATTTCCTT TGTCAATCTT TTATTTGTTA GACGTTGGAA AATGATGTTA 41409 .......... .......... .......... .......... .......... .......... 417 TGCTTTCTAG GAGAATTAAG TGGTTAAGTT TGGTTGAATT CAATTACGTA AAGCTATGGA 41469 .......... .......... .......... .......... .......... .......... 417 TATGACCATA GCCCATATGT ATGTTGATTG CATTTGCGCC TAAAGAGGGA TTTTTTTTTT 41529 .......... .......... .......... .......... .......... .......... 417 AGATGAGTCC ATTCAAAACC TTCCACTTTA TTTCTCTTAG TAGGAGTATA ACTTAAAAAC 41589 .......... .......... .......... .......... .......... .......... 417 GGGAAATTGG GACTACTCTC CTGCCGGAAA TGTTTATCAT GTTGCGTTTA TCAAAAGTCA 41649 .......... .......... .......... .......... .......... .......... 417 ATTTGTGTAA TTTTTAAACG TAAATTAGTT CACATTAATT CGATATTTTA AACAAAAAAA 41709 .......... .......... .......... .......... .......... .......... 417 TTAGATATTC TAAAACTATG TGAAAAGTAC TATAAATTAC AATTTTTTGC ATAATAATAT 41769 .......... .......... .......... .......... .......... .......... 417 ATTGAAAATA TGCATCTTAA AATGTTAGTC AAAGTTTTTA TAATTTGACT CTAAAAATAA 41829 .......... .......... .......... .......... .......... .......... 417 AAACTATGAC AAACAATATC GAACGGAGAA ATAGTCAAAA GCTTGGAGTG GAGTGTGTAA 41889 .......... .......... .......... .......... .......... .......... 417 CTAGCGTTTC AGTGTTGCTC ACGTTACTAA CGTGATACCA AGCACTGCAC AGTTTATTCA 41949 .......... .......... .......... .......... .......... .......... 417 CCAATTCAAA CTAATACACA CATGACACAT TGGGGTACGA AAAGGGAAAA TACACAGGCT 42009 .......... .......... .......... .......... .......... .......... 417 ATTATAATGC GGTGTGTTTA TGGTTTTTTT TATTAATACA GACTTCATCG AATAAATCAA 42069 .......... .......... .......... .......... .......... .......... 417 ACTATACTGG ATAAATATAT ATAATTATTA CCCCATTCAT CCGGTTTAAA TTTATTTGTC 42129 .......... .......... .......... .......... .......... .......... 417 TTATTTTTCT GTGTTATTTG TTTTGAAAAA AATGTCTTTG ACCTTTTTTG ACAACTTTTT 42189 .......... .......... .......... .......... .......... .......... 417 AGGGTATGAT TTGTATGAAA GATTTTTTTT TATTTTTTGA AAATAAGTTA GTTTCTAATT 42249 .......... .......... .......... .......... .......... .......... 417 TATTATCTCA TGTTTGGTTC AGAATGAGTG AAAAGATAAA ATAATTTTTA AAAATATACA 42309 .......... .......... .......... .......... .......... .......... 417 ATGAGAGGAA AAATAAAACA ATTTTTAGAA AATATCTTTT ATGTTTGGCT AGATAATAAA 42369 .......... .......... .......... .......... .......... .......... 417 AAGTACTTTT TAATAAAATA GTTTCTAACC TTATAATCAA CCCCGATAAT CAATTCAATA 42429 .......... .......... .......... .......... .......... .......... 417 CCTAACCCCG ACACCTAATT AATCCAAAAA TTGACCCCTA CTCCTAATAC GGGACCTGAG 42489 .......... .......... .......... .......... .......... .......... 417 ATTTGAATTG GAACACGATC TTGACCATGA AAAAAATAAG GACACGGTCC CAAGACTCGA 42549 .......... .......... .......... .......... .......... .......... 417 CCTAAGACCT AACCGTGCTA GAGTCCCGAC GTTCAAACTA GAATATGATT CTGACATCCA 42609 .......... .......... .......... .......... .......... .......... 417 AACCTGAACC AGACCCGAGA TCCAACACCA ACTCCCGACC CAACATTCAA CTGAAGATCC 42669 .......... .......... .......... .......... .......... .......... 417 AACTTTTGAA ATGGAATTCG AATGAGAGTC AATGTCTAAC CCCGGCACCC AACCCTAGGT 42729 .......... .......... .......... .......... .......... .......... 417 CCGACCCCGA ACTTGACCCG AGACTTGATC TCGACCCCAA CTTGAGACCT AACCCCAATT 42789 .......... .......... .......... .......... .......... .......... 417 CGATACTTGA GATTCGATAC CCATCCCCAA CCCCGAAACC CAACTTAGAG ACCCTTCTCG 42849 .......... .......... .......... .......... .......... .......... 417 AGATTGGACC TCGACCTAGA CACCAAACCC AAAGACTTAA ACCCGACCCT TTGCTCTATC 42909 .......... .......... .......... .......... .......... .......... 417 CCTGAACCTA ACCCCGACCA GATACGCAAC CCCTACTCAA GACTCGACCC CAAAACCCAA 42969 .......... .......... .......... .......... .......... .......... 417 CATGACACCC AACCTCGAGA TCTAACTCGA GACCCTTCCT AAGACCCAAC CTTGACCCCG 43029 .......... .......... .......... .......... .......... .......... 417 ACCAAAGTCC AAAACGTGAC CCAAGATCAA ACCTCGACCC AAACACCCAA CTCGAGATCG 43089 .......... .......... .......... .......... .......... .......... 417 AACCCCAACC CAAGACCACA CCTCCACTCG ATATGCTTCT CAAGACTCGA CTATGACTTG 43149 .......... .......... .......... .......... .......... .......... 417 ACACTCAACC TTTGACCCAA ATCCCAATTT TAGATTCGAC TTCAAATCCA ACTTTGACTT 43209 .......... .......... .......... .......... .......... .......... 417 AAGACTTGAT CCCAAGATCC AAAACCTGAC CCCGACATCC AACCTCAAAA CCTGATCCCA 43269 .......... .......... .......... .......... .......... .......... 417 AGACCCGATC TGAGACCCAA AGCCTCAAGA CCTGCTTCTG AGACCCCGAT CCCGACACTC 43329 .......... .......... .......... .......... .......... .......... 417 AATTAGAAAT TCAACCTTTA ATTCTATCTC GAACACATGA ACTTGATCAA TTCGAAATTC 43389 .......... .......... .......... .......... .......... .......... 417 GGTAGTGAGT CTCAAATATA GGTCGAGAGT CGCGTCTCGA ATTTAGAATC AAGAGCCAGA 43449 .......... .......... .......... .......... .......... .......... 417 TTTAGGATTG CTATTGCCAA TCGATATCCG AGACTTAAGT TAGGATGAAA AGTTGAGGTG 43509 .......... .......... .......... .......... .......... .......... 417 TGAGGTTTAG AATGATTTTG AAAATTGTTT TCCTTACTTT TTAAATGGAA CTCATTTTCC 43569 .......... .......... .......... .......... .......... .......... 417 TTAAATTTGA GGAAAATAAG TTGATTTGAA AAACATTATC CAAAATATTT AAGCCAACCA 43629 .......... .......... .......... .......... .......... .......... 417 AAGATAAGAA AAAGGAAAAA CCATTTTTGG AAAACATTTT CTATCATACT AAACAAATCC 43689 .......... .......... .......... .......... .......... .......... 417 TTAATTTGAA CTTCCCACTT TAAATGCTTA AGACTGCAAA ATTAGTAGAT GTTTTGGTAT 43749 .......... .......... .......... .......... .......... .......... 417 ATTCAACATC TCTTTAATTT AAGTTTAAAA ATTTAAAATT CGTTTTATTT ATTTAAGAAC 43809 .......... .......... .......... .......... .......... .......... 417 CACCTGTGAA TTAAAAAGTA GATAAAATTA TTGAAATGGT TCGAGTAAAT TTTACATTTT 43869 .......... .......... .......... .......... .......... .......... 417 AAAGAGTTAG TTCAACAGAA TTTGTACACT TCACACGGAT AGTCTTTCTT GAAATTTGCA 43929 .......... .......... .......... .......... .......... .......... 417 TGAAGTTGAA AATGGGAATA ACGAATAGAA TATTGAGTTT TGTAAGTTAC AAAATAAAAA 43989 .......... .......... .......... .......... .......... .......... 417 GGGTAAGTCA ACGAAAGAAT GTTGCATTGA GTATATCAAG GTAGGAACAA TATACAACAT 44049 .......... .......... .......... .......... .......... .......... 417 TCTATTTTGG GGATAATATA TAGACACACT TTATAATTAA CTTGTGATAG AATATATGCC 44109 |||||| |||| ||||| .......... .......... .......... .......... ....TGATAG AATAAATGCC 433 TTCACTTAAC AAGT-AATGG ACCAGGTCCC TTACTACACT AATGAATAAA ACCAAGAGTT 44168 ||||||| | |||| |||| |||| || | || ||||| || | || | || | | TTCACTT-AT AAGTCAATGA CCCAGTTCAC TTGACACACT AAAAAGTATG AACAGAAAGT 492 AAATGCAGTA AAATCAACAC AATGATTTTA CGTGGAAACC TCCTTGCTTA AGGGAGTAAA 44228 ||||||||| || |||||| || |||||| |||||||||| |||||||||| |||||||||| AAATGCAGTT TAAACAACAC AA-CATTTTA CGTGGAAACC TCCTTGCTTA AGGGAGTAAA 551 ACCACGACCC GTCTCACAGG ATTTTCAATC GTTTTCATTA ATCATCAAAA GCAAAAGCGA 44288 |||||||| |||||||||| |||||||||| ||||||| || ||| ||| || ||||||| || ACCACGACTT GTCTCACAGG ATTTTCAATC GTTTTCACTA ATCTTCACAA GCAAAAGTGA 611 AACATGATTA CACCAAACGT AAGAAAGAGT TATCAATCTT ACAGTTAAGC AATAGTCCTC 44348 |||| ||||| || |||| | ||||| ||| | | ||||| || | |||| |||| | ||| AACACGATTA CAACAAATAT GAGAAAAAGT TTTTAATCTC ACGTTCAAGC AATA-TTCTC 670 TATTGCTTAA CAAGCCTAAG TAGAAAACAA TCTACCTACT AAGCTATCCC ACCTGGACAA 44408 |||||||| | |||||||||| |||||| || |||||| ||| ||||||| || || | ||||| TATTGCTTTA CAAGCCTAAG TAGAAATGAA TCTACCCACT AAGCTATACC ACATAGACAA 730 CCTAGACTTC TAACACAACA CACCAATTCC TTTATAGATT CAGGAATGGT TTACAGTTTA 44468 | || | || ||||| || ||| ||||| ||||||| || ||||||| || ||| | | || CTTACAATTT AAACACTACC CACTGATTCC TTTATAGTTT CAGGAATAGT TTATAATGTA 790 AGAACAAGAG AATGAATTCC TAAACAAC 44496 ||| |||||| | | ||||| ||| |||| AGACCAAGAG ATTATATTCC TAAGCAAC 818 hqPGS_C01HBa0163B20.1+_SGN-U343802- (39250 39297,41073 41115,44094 44496) ******************************************************************************** EST sequence 5 +strand 916 n (File: SGN-U342545+) 1 AAAGCTGGAG CTCACCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG 61 GAATTCGGCA CGAGGGAAGG TATGAATTTT CTCTTTCCTG TTCCATCTCA AAAAGAAAAT 121 CTCTTTCCTG TAGATCAAAA TATTTGTGTC TTTTTGTCAA AATGTTAAAA ATATTTGAGT 181 GTTAATTCTG TTCAATTACA CCCAAGGTTG TGGCCTAGTG GTCAATCAAG TCGGTTGAGA 241 ACCATGAGGT CTCTAGTTCA AATCACCGTA GAGACGAAAG AAGAACACTA GGTGATTTCT 301 TCACATCTGT TCTAGCCTGA ACATCCTTAG TGGACAGTGT AATGAGAGGT GGGCAGGTAT 361 CCCGTGGAAT TAGCTGAGGT TTGAAAGCGG GCCTTGACAC CAATATATCA AAAAATATAA 421 AGGGAAACTT ACATAAATAT ACTATATTAA AAAAATATTT ACCATTTATA GCAATAACAT 481 TTGTTTTTAC TTGATCACTT TTAATACATT ATAATAAAGT TCTAATACAT ATTACGGGGA 541 ACAATTTATT ATTCACATAT AAAATTGATG AATAATACAT TTATCACTCA TTTTAATACA 601 CTTGTAACAC AATGTGTCAT TTCTTACCAA ACAAGCATAA TATATTTTTA AAAAAAGTCA 661 TAATACATAT ATATTGCATA CATATTCACT GTAAATGCAT ATTGCAGATT TAACATAGTA 721 TTGCTATGTA TTGNTACNAA ATGGTAATAA ATAAAAAGTA TCGCTAAAAT CAGTAATTAT 781 TTATTAAAAT GTATTCATCC AAGTAATTTC CCCCCACCCC CCCCCCCCCA AAAAAAAAAA 841 AAAAAACTCG AGGGGGGGGC CCGGTACCCA TTCGNCCCTA TAGTGAGTCG GATTACATTC 901 ACTGGGCGNC GTTTTA Predicted gene structure (within gDNA segment 33608 to 40865): Exon 1 34482 34500 ( 19 n); cDNA 403 421 ( 19 n); score: 0.737 Intron 1 34501 38651 (4151 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.94) Exon 2 38652 39041 ( 390 n); cDNA 422 809 ( 388 n); score: 0.774 MATCH C01HBa0163B20.1+ SGN-U342545+ 0.774 409 0.447 C PGS_C01HBa0163B20.1+_SGN-U342545+ (34482 34500,38652 39041) Alignment (genomic DNA sequence = upper lines): ATGCACCAAT AAATTTAAAA GAAAACTAAA GAAATAATGC TCTAGCTGAA TTTAAACTCT 34541 || | ||| |||| |||| ATATATCAAA AAATATAAA. .......... .......... .......... .......... 421 AGTCTCTAAA GACTTTAGAT GCACCAACAA ATTTAAAAGA AAACTAAAGA AATAATGCTC 34601 .......... .......... .......... .......... .......... .......... 421 TAGCTGAATT TAAACTCTAG TCTCGCGAAT GATTTCTCTA GCTTGTACCA ACAATACAAG 34661 .......... .......... .......... .......... .......... .......... 421 GACACTCCTA TATAACTATA CTCATCATGT GTGCACTGTT AATTATATCA CAATTGTTGT 34721 .......... .......... .......... .......... .......... .......... 421 TATTTCTTAA GATAGATACA TACATATACA TATGGTTTTC AAAGTTAACC GGTGCACGAG 34781 .......... .......... .......... .......... .......... .......... 421 AATCAACACA TTAAATATAG ATCCGCCTCT CATTAAAAGT TAGGGTTATT AGTCTTTAGT 34841 .......... .......... .......... .......... .......... .......... 421 TTGTTGAGTT GTTCCAAAAT TATTATTGAA TTGTAATAAA TTTCTAGATA TAAAAGAGTA 34901 .......... .......... .......... .......... .......... .......... 421 GTTGTGTGGA TGAATTTGTA ATAAAAATGA ATTTAATTTC TTGAAAAAGT AACTAGAACA 34961 .......... .......... .......... .......... .......... .......... 421 GATTAAGTGA ACCTTTAGTC AAGGTACTTT AATGAATCCC ACGGACTAGT AAGTTGTAAT 35021 .......... .......... .......... .......... .......... .......... 421 TTGAAATTTT GATCTAGAGA AGTCAGCAAA AATTGGTGGT TGAAATTCTA TATTGTATAA 35081 .......... .......... .......... .......... .......... .......... 421 TTAATGCAAT ATAAAAGTAT TAGAAAATAA CGATTATTTT AAAAGTAACA AGTAAACTCA 35141 .......... .......... .......... .......... .......... .......... 421 CAAATTTGTT ATTAATATAG TGAACGAAAC AAATAGGCAT AATAAAGAAA GTATAAATGG 35201 .......... .......... .......... .......... .......... .......... 421 AGAGAGTATA TAAGTTGTTA TTGTTGTGAT AAATGGATAA ATACATTTAC AGGAAGACGT 35261 .......... .......... .......... .......... .......... .......... 421 TATTAATGGT GTTTGAATTA TGTAACGCAA CTTTACACGG AAAACTTGAC TACTTACTCC 35321 .......... .......... .......... .......... .......... .......... 421 TCAATCAATT CAACCAACCT AACTAACCTT CTTCATGTCC AAACATTCCA CGATTTATGA 35381 .......... .......... .......... .......... .......... .......... 421 TAAAATAGAT CAAACTATTT CTCTCTTAAA TAGATATCTT AAGTTCAAGT TCGAAATTTA 35441 .......... .......... .......... .......... .......... .......... 421 AAATAATCAA ATTTCAAGCG AATCTCCAAT TCCAATTAAT AAGAAAAAAG ACATTAAGTA 35501 .......... .......... .......... .......... .......... .......... 421 GGTGTTTGAC CATGTGATAT CATATCACGA TATGATATTG TGAGATGGAA TCAGTGTTAC 35561 .......... .......... .......... .......... .......... .......... 421 GATATGCGAT TTTGTGCTGA TTCCAGATGT GACACTGTAT TCTCCAAAAA TTATGAAGTG 35621 .......... .......... .......... .......... .......... .......... 421 GGGTCATATA GAAATACCAT ATCATGATTT AAGTTATTTT AATACAAAAA TTGATTCACG 35681 .......... .......... .......... .......... .......... .......... 421 GGTTTATATT CGATTAAAAT AACCTCACAT TTATATCTAT TAACAATTTA TTTCACATGT 35741 .......... .......... .......... .......... .......... .......... 421 AATAATAAAA TTTATAATCA CATCATTACT CTTAAAATTT ATTAAACTCA CGGATATAAA 35801 .......... .......... .......... .......... .......... .......... 421 ATTTATTATT CTCACGAACA TATAGTCACT TTCACTCACA TTTTATGATT GTTGAGTAAT 35861 .......... .......... .......... .......... .......... .......... 421 AAAATCTAGA AGAGCCCGTG AAAGGTATTT CATTTTTACT CAAAATATAT TGATGAAATA 35921 .......... .......... .......... .......... .......... .......... 421 ATTACTTATG TTGAGAATAA ATAACTTTGT AATAATTTAT TATACGATTT TATAATTATT 35981 .......... .......... .......... .......... .......... .......... 421 TAATAATATT GAATAAATTA AAGGAGCAAT TTTAATAGTT TATTACTTAT TAGATTTTTA 36041 .......... .......... .......... .......... .......... .......... 421 TGTTCATGAG AAAATATACA ATATCAAAAT TTTATATCGC GTATACAACT AAAACTTCAA 36101 .......... .......... .......... .......... .......... .......... 421 TTTCATCTCA TAATTTCATA TCATGATACC AAAATTTTAT ATCGCGTATA CAAATAAAAC 36161 .......... .......... .......... .......... .......... .......... 421 TTTAATTTCA TCTCATAATT CCATATCATG ATACCATCTG GCATAGCCAA ACGGGCTCTA 36221 .......... .......... .......... .......... .......... .......... 421 AAGAGATTCA GGCGGGAAAG GGTGTTTGTG TCATTTGCTA ATCCCGCGTC AACTTTGGCG 36281 .......... .......... .......... .......... .......... .......... 421 TCTTCCATCA CATTACACTC TCTTACTAAA ACCATCATAC CTAAACTTCT CCCTTTTCCC 36341 .......... .......... .......... .......... .......... .......... 421 ACCGAAACCA TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC 36401 .......... .......... .......... .......... .......... .......... 421 ATCCATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 36461 .......... .......... .......... .......... .......... .......... 421 ATATATATAT CTTCTACAAT AATTTTGCTA TATTTACAAT TACAGATAGT CCATCTCATT 36521 .......... .......... .......... .......... .......... .......... 421 GGCAGTATTT ACCATGAATA ACGATACCCC AAGCATGATT CATGATCCAT TGATTGATTC 36581 .......... .......... .......... .......... .......... .......... 421 CACAGGAGAT GGAGGCTATG CATTGAGTGG AAAAATTATG CTAAGTGCTA TTGTTATCTT 36641 .......... .......... .......... .......... .......... .......... 421 ATTCACTGTT GTTGTTTTCA TGGTGGGTCT TCATTTATAT GCTCGTTGGT ACCTTGTGTC 36701 .......... .......... .......... .......... .......... .......... 421 TCAGCGCCGC CGTGAACTCC TTCGCCGCCG TAGGGTCAAC CATCGACGGA CTCATATTGT 36761 .......... .......... .......... .......... .......... .......... 421 TTTCTACGTT GATAATCCTG GTTCCGGTTT GTCTGATGCT AACCGGGGTT TGGAACAGGC 36821 .......... .......... .......... .......... .......... .......... 421 GGTTCTCAGT TCCTTGCCGG TTTTTGTTTA TTCCGACAAG ACTCACCCGG AACCGCTGGA 36881 .......... .......... .......... .......... .......... .......... 421 ATGTGCTGTT TGTTTATCGG AATTTGAGGA GAATGAAAAG GGTCGGGTTT TACCCAAGTG 36941 .......... .......... .......... .......... .......... .......... 421 TAATCACTCT TTTCATTCGG AATGTATTGA TATGTGGTTT CATTCTCATT CTACGTGCCC 37001 .......... .......... .......... .......... .......... .......... 421 TCTTTGTCGC TCTCCGGTGG AGGCAGTACT TATCGGACCG GATATTAACC GGGTTGAGGT 37061 .......... .......... .......... .......... .......... .......... 421 GGCGGTAACA GTGAACGAAC CGGGTTCGAG TTCGGGTTGT GAGGAGAATA GTAGTCATCA 37121 .......... .......... .......... .......... .......... .......... 421 TTCTAATATG ACGCCGTTGG GTTGCCGGCG AAAAGGATTG GATCTGACCG GAGTAAGAAT 37181 .......... .......... .......... .......... .......... .......... 421 AGAGGTACCA AGAAGGAACG ATTTCGAAGC CGATTTGGAA ATGGGAGTGA GAGTAAGTTC 37241 .......... .......... .......... .......... .......... .......... 421 ACCGGCGATT CAATCGAGAT CACCAGCGAC TCGTTTAATG TCTTTGAGAA GAATCCTAAG 37301 .......... .......... .......... .......... .......... .......... 421 TATGAACAGA AAAACACCCA CCGGAACTAG CCATTCTCCT AGTGGAAGTT GCGCCGCGGA 37361 .......... .......... .......... .......... .......... .......... 421 TTTTGATATA GAAACCGGCG GTAGTAGTGG TGGTGGAAAA ATTCAAGTCG GCGGCGAACG 37421 .......... .......... .......... .......... .......... .......... 421 CATCACAACT CCGTGAGTTA AAAATGCGGG CACACATCCC TAGGCAAAAG CTGAAAAATA 37481 .......... .......... .......... .......... .......... .......... 421 TTGAGTCACG CCGATTGCGT GAAAACAGGA GAAACAGTGA CTTGACTGAC AGAAAAGTCC 37541 .......... .......... .......... .......... .......... .......... 421 TATGACACGT GGCAATTGCT GAGTGATTCA CCTTTTACAA GGCAGTCATA GTAGACTTTG 37601 .......... .......... .......... .......... .......... .......... 421 AGGGGGGAAT GTTTGACTTG TAAATTAATG GTAGGATTAG AAAAATGCAA AGTTGTAAAG 37661 .......... .......... .......... .......... .......... .......... 421 CGTTACGTGC AAGAGTCAAT TACAATGTGT CTATTCTAAA TTCGTTGAAT TTTTTTTCCC 37721 .......... .......... .......... .......... .......... .......... 421 TATTATAAAG TATTTGATAA ACGTTGGTTC CTAATTTATG ACTCGTGTAG TTGGTAAGTG 37781 .......... .......... .......... .......... .......... .......... 421 GAATAGTTCA ATCATGTTAA AGTATTACAG TCCAATTTGC AATATCATTA TTTGGAACTT 37841 .......... .......... .......... .......... .......... .......... 421 GTTACACAAA ATTTATATAT ATATATATAT ATATATATAT ATAAAATTTA TTGTTAAGAA 37901 .......... .......... .......... .......... .......... .......... 421 ATATAATAAT GTTAGTTTCA AACGGTGAAA ACTATATTAA TATAAATATT TCTAATGCAG 37961 .......... .......... .......... .......... .......... .......... 421 CTGATTCTTA TATCTCCAAC ATATATTTTA GTGTACTTAT TTGGAAGTGT TTTAGGAAAT 38021 .......... .......... .......... .......... .......... .......... 421 ATCTCAATAA CGTAAAATAA GGAAAAATGA GTAAAATATA CATCAACAAG TGAAAAGTAA 38081 .......... .......... .......... .......... .......... .......... 421 AGTTTTATAA GAATAATTAT TGACTCCGGA GCCTAAATGA TATAAAATGT TAATAAAAAT 38141 .......... .......... .......... .......... .......... .......... 421 TCTAAAACGG TATATGAATA TTTATTTTAA TCAAAAGAAC AAAATCGCTG GAAGTGCATC 38201 .......... .......... .......... .......... .......... .......... 421 AATTTTGCTC GCTCGAAAAA GTAAAATTGT TGTCTTAGCA GCGATTTTCA AAATAAATTT 38261 .......... .......... .......... .......... .......... .......... 421 TTGTTAATGA TTTTTTAATA AATCACTGCC TAATCAGTGA TTTCTTTAAT TTTTTAAATT 38321 .......... .......... .......... .......... .......... .......... 421 ATTTATTTGA AAAAAAAATT AAGAGCCAAG GGCAGCGCGA TTTGTCTCCA AATTGTTTTT 38381 .......... .......... .......... .......... .......... .......... 421 TTATTTTTTC CAATCAATTT TTTTTACAAT TTTTAAAATT AAAATTAAAA TTTCTTAAAG 38441 .......... .......... .......... .......... .......... .......... 421 AAATTTTTAT TTTAAATTTT TCTACTACTT ATTCCAAAAT AATTTTTAAT GATTTTTTAA 38501 .......... .......... .......... .......... .......... .......... 421 AACAAGTAGC AATCAAAATT TTTCTAAAAA ATTGATTTAA AAAAATATAA AAAAAAGTTG 38561 .......... .......... .......... .......... .......... .......... 421 GAGACAAATC GCTGCATTTT TTTTTTAAAT TTCAAATATA AGATTAAGAA AATCACTGCT 38621 .......... .......... .......... .......... .......... .......... 421 TATAGAGCAA TTTATTAATA ATTTTTTTTT GGGAAACTTA TATAAATATA CTAAAATAAA 38681 |||||||||| ||||||||| ||| | |||| .......... .......... .......... GGGAAACTTA CATAAATATA CTATATTAAA 451 AAAATATTTA CCATTTATAG CAATAATATC TTTTTTTCAC TTGATCACTT TTAATTCATT 38741 |||||||||| |||||||||| |||||| || | ||||| || |||||||||| ||||| || | AAAATATTTA CCATTTATAG CAATAACATT TGTTTTT-AC TTGATCACTT TTAATACA-T 509 TTTAATACAA GTT-TAATAC ATATTACAAA TAACAATTTA TTATTCATAT ATAATACAAA 38800 | ||||| || ||| |||||| ||||||| ||||||||| |||||| | || ||| ||| TATAATA-AA GTTCTAATAC ATATTACGGG GAACAATTTA TTATTC--AC AT-ATA-AAA 564 TTTTAATAAT AGATAATACA TTTATTGCAC ATTTTAATAC ACTTATAATA CAATATGTCA 38860 || || | |||||||| ||||| | | |||||||||| |||| ||| | |||| |||| --TTGAT--G A-ATAATACA TTTATCACTC ATTTTAATAC ACTTGTAACA CAATGTGTC- 618 AATTTTTACC AAACAAATAT AATATATTTC AAAAAACAAT TATAATTCAT ATATATTGCA 38920 | || ||||| |||||| || ||||||||| ||||| | | ||||| ||| |||||||||| ATTTCTTACC AAACAAGCAT AATATATTTT TAAAAAAAGT CATAATACAT ATATATTGCA 678 TACATAATTC ACTTTTAATT CATATTGTAG ATTTGAC--A -TA--GC--- --ATTGTTA- 38969 ||||| |||| ||| | ||| ||||||| || |||| || | || || |||| || TACAT-ATTC ACTGTAAATG CATATTGCAG ATTTAACATA GTATTGCTAT GTATTGNTAC 737 TAAATGGTAA TAAATAAAAA GTATTGCTAA AATCAGTAAT TATTTATTAA AATGTACTAA 39029 ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||| | | NAAATGGTAA TAAATAAAAA GTATCGCTAA AATCAGTAAT TATTTATTAA AATGTATTCA 797 TTTATGTAAT TT 39041 | | ||||| || TCCAAGTAAT TT 809 hqPGS_C01HBa0163B20.1+_SGN-U342545+ (38652 39041) ******************************************************************************** EST sequence 28 +strand 925 n (File: SGN-U339745+) 1 GATTGGGACC GGGCCCCCCT CGAGTTTTTT TTTTTTTTTT TTTCACCAAA CGTAAGAAAG 61 AGTTATCAAT CTTACCGTTA AACAATAGTC CTCTATTGCT CAACAAGCCT AAGTAGAAAA 121 ACAATCTACC CACTAAGCTA TCCCACTTGG ACAACCTAGA CTTTTACACA ACACACCAAT 181 TCCTTTATAG ATTTAGCAGT GGTTTACAAT TTAACAACAA GAGAATAAAT TCCTAAACAA 241 CTATACGACA AGCTCAAGAT GTTGCTGTTG TTCTTGGAAT GATTCTACCT TTTGTGTAGC 301 CTTTGCAAGT GTTCTTGAAA AGTTTTTATC AAGTTGCAAA AACTAAAAAA CAAATGTTTT 361 GGAAAGTGCC TTTTATGTGG GCAAGTCACT TTCCTAAACT CCTTTGCCAT TTGCTGAAAA 421 GGTCACACTT TTCTGACGCC ATCGGGAAGT GTGCACCTAC TTTCTGTACC ATCTCCAGCT 481 GGCAGTCGAC TGACTCATTT TCATGAGAGC CTGGTACCTC TACTAGGTCC CTGGTTTTGT 541 TTCTTCTGCA ATACCTCAAA CAAGACACCT GCAATACACA ATTAGAGAAC CTGATACCTT 601 TATGAGGTCC CATTGTTTGT CAAATCATCA AAACTACAAA TAACATTTAC AGTTAAAGTA 661 ACATTTGAGT TAAAATAAAA TCGAGTGAAG AGTATAGTTA GAGTGATTTC CTGAGAAAAA 721 ATTCATAATT GAGTGACTTT TGAGGTAAAA ATCAAAATTG AGTTAACTTT GTGAGAACAG 781 AGTCTATAAT TAAATTGAGT GACGATCTAT GACATCGTGT CAAGAAAAAA TCACATTACC 841 TTTAAGTCCT CTCAATTATG GTGGATAGAC CAGGTGTAGT TTAAACAAAA ATAGCCTTTA 901 TTTTCTCCAA AGGGCCTAGG TTTGG Predicted gene structure (within gDNA segment 43269 to 49888): Exon 1 44300 44903 ( 604 n); cDNA 45 650 ( 606 n); score: 0.858 Intron 1 44904 48136 (3233 n); Pd: 0.000 (s: 0.83), Pa: 0.000 (s: 0) Exon 2 48137 48172 ( 36 n); cDNA 651 683 ( 33 n); score: 0.639 Intron 2 48173 48551 ( 379 n); Pd: 0.449 (s: 0), Pa: 0.000 (s: 0) Exon 3 48552 48583 ( 32 n); cDNA 684 714 ( 31 n); score: 0.719 PPA cDNA 43 24 MATCH C01HBa0163B20.1+ SGN-U339745+ 0.858 672 0.726 C PGS_C01HBa0163B20.1+_SGN-U339745+ (44300 44903,48137 48172,48552 48583) Alignment (genomic DNA sequence = upper lines): ACCAAACGTA AGAAAGAGTT ATCAATCTTA CAGTTAAGCA ATAGTCCTCT ATTGCTTAAC 44359 |||||||||| |||||||||| |||||||||| | ||||| || |||||||||| |||||| ||| ACCAAACGTA AGAAAGAGTT ATCAATCTTA CCGTTAAACA ATAGTCCTCT ATTGCTCAAC 104 AAGCCTAAGT AG-AAAACAA TCTACCTACT AAGCTATCCC ACCTGGACAA CCTAGACTTC 44418 |||||||||| || ||||||| |||||| ||| |||||||||| || ||||||| ||||||||| AAGCCTAAGT AGAAAAACAA TCTACCCACT AAGCTATCCC ACTTGGACAA CCTAGACTT- 163 TAACACAACA CACCAATTCC TTTATAGATT CAGGAATGGT TTACAGTTTA AGAACAAGAG 44478 | |||||||| |||||||||| |||||||||| || | |||| ||||| |||| | |||||||| TTACACAACA CACCAATTCC TTTATAGATT TAGCAGTGGT TTACAATTTA ACAACAAGAG 223 AATGAATTCC TAAACAACTA TACGAAAAGC CCCAGATATT GTTGTTGTTC TTGGAATAAT 44538 ||| |||||| |||||||||| ||||| |||| | |||| || | |||||||| ||||||| || AATAAATTCC TAAACAACTA TACGACAAGC TCAAGATGTT GCTGTTGTTC TTGGAATGAT 283 TCTACCTTTG CTTTGTAGTA GATTTTGCAA GAGTTCTTGA AAAGTTTTTA TCAAGTTGCA 44598 |||||| | ||||| ||| | ||||||| | |||||||| |||||||||| |||||||||| TCTACC--T- -TTTGT-GTA GCCTTTGCAA GTGTTCTTGA AAAGTTTTTA TCAAGTTGCA 338 AAAACTAAAC AA-AAATGTT TAGGAAAGTG CCTTTTATAT GGGCAAGTCA CTTTCCTAAA 44657 ||||||||| || ||||||| | |||||||| |||||||| | |||||||||| |||||||||| AAAACTAAAA AACAAATGTT TTGGAAAGTG CCTTTTATGT GGGCAAGTCA CTTTCCTAAA 398 CTTCTTTGCA ATTGGCTGGA AAAGTCATAC -TTTCTGACG TCATCGGGAA GTGTGCACCT 44716 || |||||| ||| |||| | || |||| || ||||||||| ||||||||| |||||||||| CTCCTTTGCC ATTTGCTGAA AAGGTCACAC TTTTCTGACG CCATCGGGAA GTGTGCACCT 458 ACTTTCTGTA CCGTCTTCAG CTGACAATCA ACTGGCTCCT CATCATGAGA GCCTAGTACC 44776 |||||||||| || ||| ||| ||| || || |||| ||| | |||||||| |||| ||||| ACTTTCTGTA CCATCTCCAG CTGGCAGTCG ACTGACTCAT TTTCATGAGA GCCTGGTACC 518 TCGACTAGGT CCCTGAGTTT GTTTCATCTG CAATA-CTCA AGCAATAAAC CTGCAATACT 44835 || ||||||| ||||| ||| ||||| |||| ||||| |||| | ||| | || ||||||||| TCTACTAGGT CCCTGGTTTT GTTTCTTCTG CAATACCTCA AACAAGACAC CTGCAATACA 578 CAATTA-AGA AATTGATACC ---A-AAGGT CCCCAAGTTT GTCAAATCAT CAAAACTACA 44890 |||||| ||| | ||||||| | |||| ||| |||| |||||||||| ||||||||| CAATTAGAGA ACCTGATACC TTTATGAGGT CCCATTGTTT GTCAAATCAT CAAAACTAC- 637 AAATAACATT TTCCCCCTTT TTGATGATGA CAAACACTGA AACCATGATC TAATATCCTT 44950 |||||||||| | | AAATAACATT TAC....... .......... .......... .......... .......... 650 TCAACTTTGT TCCTCCTTTT TATATTCCCC CTCAACTTTG TTCCCCCTTT TTATATTCCC 45010 .......... .......... .......... .......... .......... .......... 650 CCTCACTAAA TGTTCCCCCT CACTAATGTA TCATTTAGCT ACACACAGTT TTACTTCCCC 45070 .......... .......... .......... .......... .......... .......... 650 CTTTTGGCAT CATAAAAAAA ACGCAGTAAA CCAGTGATGT GAGTAGAAAC ACTGAACAAG 45130 .......... .......... .......... .......... .......... .......... 650 ATCAAGGCTA AAAAGCAATC AAACAGTAGA GGAAAAGCAG TCGCAAAAGA AGATGAGAAG 45190 .......... .......... .......... .......... .......... .......... 650 AACAACAAAA GAATAAAGTA ACCAACATGC CATCATAACA TAAATACATT AAAAACAAAC 45250 .......... .......... .......... .......... .......... .......... 650 TAAAATTCAT CGACATATTG ATAAGCCACA CAACAAAAAA AGTGACACAC GGAAGGATTG 45310 .......... .......... .......... .......... .......... .......... 650 ATTAACAATC TAGGAAGAGG GAGGGGTTTG AGATAGGGAC TGGATAACAA GAGTGAGTCG 45370 .......... .......... .......... .......... .......... .......... 650 TGCATTGGCA ACATCATTAT CCTTGATGGC CTTTTCTTGC AGGGCAATTA TCTTCACCTT 45430 .......... .......... .......... .......... .......... .......... 650 CAACTCATCA TTATCTTTCT CCAGAGCTTG AACAACTGAA GAACCAGGTC CCTCACTCTG 45490 .......... .......... .......... .......... .......... .......... 650 TGCAGTAAGC AGTTCTGCTT TGAGTATAAC AATTTCTGCC TCTTTACCTC TCAACCGCAC 45550 .......... .......... .......... .......... .......... .......... 650 AGTGAGCTCT TCAATCTCGT GTTTAAGCTG ATCCAGGTCC TCAAGAAGTT GAGCCATCTT 45610 .......... .......... .......... .......... .......... .......... 650 GCTTTTTGGA TAGCCTCTGC CTTCAATGCA TTCACATTTA AACAAGGTAT TCTCAGAGAT 45670 .......... .......... .......... .......... .......... .......... 650 AGTCTGTTTA ACTGTCTCAA CCTTTCCAAC ACTAAGAGGA ATTCGAAAAT GCTTGAATAC 45730 .......... .......... .......... .......... .......... .......... 650 TTCCGTGAGA AAGTATCCAT AACCCATTCC ATGAACACCT TTCCTCTCAA TGATAGTTTT 45790 .......... .......... .......... .......... .......... .......... 650 GTGAATGTGC TCAATCATTA GACTAGGAAG GCTCAGAGCT TCAAAGCTGC ACAACATCTC 45850 .......... .......... .......... .......... .......... .......... 650 CATCACATAC AAGTCAGCAG CAGTAGTAAG TGTCCTCTTT TCTGTGCTAG GAAAGAGCAC 45910 .......... .......... .......... .......... .......... .......... 650 CTTGTTGACG AACTCAAAGA CCAGCTGATA CTCACTCTTC ATGATTTTAT TATAAGTCCC 45970 .......... .......... .......... .......... .......... .......... 650 AGCAACCTTA GTTGTGGGTG TCTTAGAAAT CATAGAGGCA AACTCAGAAG AGCAAGTTTT 46030 .......... .......... .......... .......... .......... .......... 650 TCCCAGCACA GACCGGGTCC CCTCTGTAGG CACCCTGAGG ATTTTGCTCA ACACCTCCTC 46090 .......... .......... .......... .......... .......... .......... 650 ATCTAAAGAT ATGGCAATAT CGCTTACCCG TGTAAGGAGA CTCCCATCTT CCATGAATTG 46150 .......... .......... .......... .......... .......... .......... 650 AACATTGTAG TAAAATTCAC GAACCTCTTC TTCATGGAGG ATGGGGGATT TGTTGTTGAA 46210 .......... .......... .......... .......... .......... .......... 650 TAGGTGCAGC CAAGATTGAA TCTCCACCAT GTCATGCAGA GAATCCATGC CAGGAAGAGT 46270 .......... .......... .......... .......... .......... .......... 650 TATAATGCCC ATATCAAAAA CTCTTCCTGC GAGGACTGCT TCTTTCCTCA GGCTGTCAAC 46330 .......... .......... .......... .......... .......... .......... 650 TACTTCCTGC ATGCTGACAT TCTCAACTTT CCTGGCTTGA GAACCAGGTC CCTGTGACTA 46390 .......... .......... .......... .......... .......... .......... 650 CTTTCTCTTC TTCCTTTTTG ATTGCGATTG TTCAACCTTC CTTGTAGCCT TTTCCCTTTT 46450 .......... .......... .......... .......... .......... .......... 650 CTTTTCTGAC TTCTTTTTCT TATTTTTCTT CTCCGCTTCT TCTCCCGACA ACTCAACCAA 46510 .......... .......... .......... .......... .......... .......... 650 TTTTTCCTCA GGTATTCTAA AATTTGATAC CTTGAAGGTT CTTGCACTTC TAACTGCAGC 46570 .......... .......... .......... .......... .......... .......... 650 AGTAGAACGT GCACTTGCCT TCAAGGAATC AGCCGTCAAC TTTTGTGTAG CAGACCTTGT 46630 .......... .......... .......... .......... .......... .......... 650 AGTAGGTCGT CTCCTAGGTG CCTCCTCCAC AACCTTTTCC TTCACTTTTC TAGATCCCAC 46690 .......... .......... .......... .......... .......... .......... 650 TCTTTCTCTT CTCTCAACCT TCCATTTTAA TGGTTCTTCC TCACTTGCAG ATTCAGAGGA 46750 .......... .......... .......... .......... .......... .......... 650 AGAGGAAGAA GAGTACCTTC CTAAATCAGG GGTTTTATCA AAGATGGGTT GAGAAGGTCT 46810 .......... .......... .......... .......... .......... .......... 650 TACCTCTTCC CTTTCCAGGA CATCAGTATG CTCTGCCCTT GCTTCTTCTC GCATCATTCC 46870 .......... .......... .......... .......... .......... .......... 650 CAGGCTTTCA ATCACGAGTT CCTCACTTGC TGCCAGTATG TTAGACTCGG AAGCCTATGT 46930 .......... .......... .......... .......... .......... .......... 650 TTTGGTAGAT CTGCTTTAAA CATGTTGTCA GGAAACATGT CTTGAAATGG ACCAGGTCCA 46990 .......... .......... .......... .......... .......... .......... 650 GTAGGCACTG CAGAAGTGTT TAGATCTATG GCGAAGAAAG GGTTATCAGG AGTGTCTTGT 47050 .......... .......... .......... .......... .......... .......... 650 GGAGGACTGG GTGAGGGAGG AAGTCTGGCT TGAGCGGTTG TTGGAGAATA GAATGCAAGG 47110 .......... .......... .......... .......... .......... .......... 650 GGCTCTATTT CACTAAGAGC ATCCAACATT TGTTTAGAAG AAGATGAAGA AGAAGACATG 47170 .......... .......... .......... .......... .......... .......... 650 GTTGTGATAC TAGAAGGTTT CGTTGAAAAG CAAAGAGAGG AAGAAGAAGA TAGATTTTGC 47230 .......... .......... .......... .......... .......... .......... 650 CCTTGAATTT GATAAGCCTT TTGAGAAAAG AGAGATGAAG TTAAGAGACG GATGAGAGTT 47290 .......... .......... .......... .......... .......... .......... 650 TCAAAAAGAA GAAAGGCTTT TTAAAAGAAG TGAAAGGGTG CCAGATCCTG TGATTGGATG 47350 .......... .......... .......... .......... .......... .......... 650 CGTCGTTTGA GAGAGAAACG ATGGGACTGA TCGGTCAGAG TAACCGATGA TTGACACGTG 47410 .......... .......... .......... .......... .......... .......... 650 GCATTTTCAA CGGTCAAATT TTTTAGTTTA AATTTAATGT ATAAATGCTA ACCTGGACAG 47470 .......... .......... .......... .......... .......... .......... 650 GTACCAGGTA CCAAGGTAGA GTTTAACTTT ATTCCTTAAT TGTTCTAGGT TCTTCTTTTG 47530 .......... .......... .......... .......... .......... .......... 650 CTAAGCAGGT CCCTACTGAG AGTATACCTA CAAAAGATAC AAAAAGGGAT CTTTGTTCAG 47590 .......... .......... .......... .......... .......... .......... 650 ATATTTAAAA TTCACACAAA GGATACCTGC ATTGCAATTT TAGCCATCAA GGGAGTTCCA 47650 .......... .......... .......... .......... .......... .......... 650 CTGTTGGAAG CCAAAAGCAT CACTTGGAGA TCAACATCCC AACTTTAACC AATTCCTCTC 47710 .......... .......... .......... .......... .......... .......... 650 AAATTGATCC TTGCTGAGAG CCTTGGTGAA GATGTCTGCA ATTTGTTCCT CCATTGGACA 47770 .......... .......... .......... .......... .......... .......... 650 ATATGTGAGC ACAATATTTC CCTTTTCAAC ATTATCTCTC AAAAAATGAT GTCTAACATC 47830 .......... .......... .......... .......... .......... .......... 650 AATATGCTTT GTTCTCTTAT GGTGGACTGG GTTCTTTCCC ATACTAACAG CACTAGTATT 47890 .......... .......... .......... .......... .......... .......... 650 GTCACACATA AGAGGAATTG CGTTGATGTG AATTCCAAAA TTTTCCAAGT ATTGCCTGAT 47950 .......... .......... .......... .......... .......... .......... 650 CCACAACAAT TGAGAACAAC AGGCTGCAGC AGCTACATAT TCAGCTTCAG CAGTTGAAAG 48010 .......... .......... .......... .......... .......... .......... 650 AGCCACAGAG TCCTGCTTCT TAGTACCCCA AGAGATAAGT GATGATCCAA GGAAATGAGC 48070 .......... .......... .......... .......... .......... .......... 650 CATTACAGAG GTGCACTTCC TGTCAACTTG CTAACCTGCA AAATAAGCAT CTTCAAAACC 48130 .......... .......... .......... .......... .......... .......... 650 AACTAGATCA AAAGTATCAC CTGCAGAATA AAAGAGAACC AGGTCCCCTA TTTTCTTCAA 48190 | |||||| || || || || ||| | || | | ......AGTT AAAGTAACAT TTG-AG-TTA AAATAAAATC -G........ .......... 683 GTATCTAAGA ATACGTTTTG CAGCCTTCAG GTGTGAATCA CGAGGACATG CTTGAAACCT 48250 .......... .......... .......... .......... .......... .......... 683 GAAACACATT CCAACAATAT ACACAATATC AGGCATGCTA GCAGTCAGAT ATAACAAGGA 48310 .......... .......... .......... .......... .......... .......... 683 TCCAATGATT CCTCTGTACA TTGTCTGATT CACAAGGGGA TCAGATTCTT CTACTATCAT 48370 .......... .......... .......... .......... .......... .......... 683 CTTGGAATTT GTTCCCATAG GAGTATCAAT AGGTTTAGAA TCAAACATAT TGAATTTCTT 48430 .......... .......... .......... .......... .......... .......... 683 CAGCAACTCT TTGATGTACT TCTCCTGGCA TATTGAAATC CCATTTGATG ATTGCTTGAT 48490 .......... .......... .......... .......... .......... .......... 683 TTGCAGACCC AAGAAGAATG TCAACTCACC CATCATGCTC ATTTCAAACT CCCTTCCCAT 48550 .......... .......... .......... .......... .......... .......... 683 TAGTGATGAG AATTCTTCAC AGAGATGTTC TGA 48583 ||||| ||| || || | || ||| | | ||| .AGTGAAGAG TATAGTT-AG AGTGATTTCC TGA 714 hqPGS_C01HBa0163B20.1+_SGN-U339745+ (44300 44903,48137 48172,48552 48583) ******************************************************************************** EST sequence 27 +strand 588 n (File: SGN-U339744+) 1 TTGTTGAGCA CTCTTACGCA GTACCCCACC CGGGTGGAAA ATCGATGGGC CCGCGGCCGC 61 TCTAGAAGTA CTCTCGAGTT TTTTTTTTTT TTTTTTTTTC AATCGTTTTC ACTAATCTTC 121 AAAAGCAAAA GTAAAACACG ATTACACCAA ACGTAAGAAA GAGTTATGAA TCTTACCGTT 181 AAGCAATAGT CCTCTATTGC TTAACAAGCC TAAGTAGAAA ACAATCTACC CACTAAGCTA 241 TCCCACCTGG ACAACCTAGA CTTTTAACAC AACACACCAA ATCCTTTATA GATTCAGGAA 301 TGGTTTACAG TTTAAGAACA AGAGAATATA TTCCTAAACA ACTAGACGAA AAGCTCAAGA 361 TATTGCTGTT GTTCTTGGAA TAATTCTGCC TTTACTTTGT AGAGCCTTTG CAAGAGTTCT 421 TGAAAAGTTT TTATCAAGTT GCAAAAACTG AAGAAAAGTG TTTAGGAAAG TGCCTTTTAT 481 ATGGGCAAGT CACTTTCCTA AACTTCTTTG CCATTGGTTG GAAGGGTCAC TTTCTGACGC 541 CATCGGGAAG TGTGCACCTA CTTTCTGCAC CATCTCCAGC TGACAGTT Predicted gene structure (within gDNA segment 42304 to 46046): Exon 1 44250 44742 ( 493 n); cDNA 96 585 ( 490 n); score: 0.931 MATCH C01HBa0163B20.1+ SGN-U339744+ 0.931 493 0.838 C PGS_C01HBa0163B20.1+_SGN-U339744+ (44250 44742) Alignment (genomic DNA sequence = upper lines): TTTTCAATCG TTTTCATTAA TCATCAAAAG CAAAAGCGAA ACATGATTAC ACCAAACGTA 44309 |||||||||| |||||| ||| || ||||||| |||||| || ||| |||||| |||||||||| TTTTCAATCG TTTTCACTAA TCTTCAAAAG CAAAAGTAAA ACACGATTAC ACCAAACGTA 155 AGAAAGAGTT ATCAATCTTA CAGTTAAGCA ATAGTCCTCT ATTGCTTAAC AAGCCTAAGT 44369 |||||||||| || ||||||| | |||||||| |||||||||| |||||||||| |||||||||| AGAAAGAGTT ATGAATCTTA CCGTTAAGCA ATAGTCCTCT ATTGCTTAAC AAGCCTAAGT 215 AGAAAACAAT CTACCTACTA AGCTATCCCA CCTGGACAAC CTAGACTTCT AACACAACAC 44429 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| | |||||||||| AGAAAACAAT CTACCCACTA AGCTATCCCA CCTGGACAAC CTAGACTTTT AACACAACAC 275 ACCAATTCCT TTATAGATTC AGGAATGGTT TACAGTTTAA GAACAAGAGA ATGAATTCCT 44489 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| || |||||| ACCAAATCCT TTATAGATTC AGGAATGGTT TACAGTTTAA GAACAAGAGA ATATATTCCT 335 AAACAACTAT ACGAAAAGCC CCAGATATTG TTGTTGTTCT TGGAATAATT CTACCTTTGC 44549 ||||||||| ||||||||| | |||||||| ||||||||| |||||||||| || ||||| | AAACAACTAG ACGAAAAGCT CAAGATATTG CTGTTGTTCT TGGAATAATT CTGCCTTTAC 395 TTTGTAGTAG ATTTTGCAAG AGTTCTTGAA AAGTTTTTAT CAAGTTGCAA AAACTAAACA 44609 ||||||| || |||||||| |||||||||| |||||||||| |||||||||| ||||| || | TTTGTAG-AG CCTTTGCAAG AGTTCTTGAA AAGTTTTTAT CAAGTTGCAA AAACTGAAGA 454 AAAATGTTTA GGAAAGTGCC TTTTATATGG GCAAGTCACT TTCCTAAACT TCTTTGCAAT 44669 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAAGTGTTTA GGAAAGTGCC TTTTATATGG GCAAGTCACT TTCCTAAACT TCTTTGCCAT 514 TGGCTGGAAA AGTCATACTT TCTGACGTCA TCGGGAAGTG TGCACCTACT TTCTGTACCG 44729 ||| ||||| ||| |||| ||||||| || |||||||||| |||||||||| ||||| ||| TGGTTGGAAG GGTC--ACTT TCTGACGCCA TCGGGAAGTG TGCACCTACT TTCTGCACCA 572 TCTTCAGCTG ACA 44742 ||| |||||| ||| TCTCCAGCTG ACA 585 hqPGS_C01HBa0163B20.1+_SGN-U339744+ (44250 44742) ******************************************************************************** EST sequence 57 -strand 407 n (File: SGN-U332042-) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT 61 TTTTTTTTTT TTTTAAATTA ACAGGCATGC CATCATAACA TTAATACATT AAAAACAAAC 121 TGAATATCCA TCAATACAGT GATAAGCCAC AAAAAAAATT GACACAAAAG AAAGTGTTCA 181 ATAGGCTAGG AAGAGGGGGG AGGATGAGAC AGGGACTGGA TAACAAGAGT GAGTCGTGCA 241 TTGGCAGCAT CATTATCTTT GATGGACTTT TCTTGCAGGG CAGTGATATT CGCCTTCAAC 301 TCAGCATTTT CCTTCTCCAT AGCTTGAATC ACTGAAGAAC CAGGTCCCTC ACTCTGTGCA 361 GTAAGCAGTT CTGCTTTGAG TATAGCAATT TCTACCTCTT TACCACT Predicted gene structure (within gDNA segment 43756 to 46348): Exon 1 45209 45541 ( 333 n); cDNA 79 407 ( 329 n); score: 0.848 PPA cDNA 50 1 MATCH C01HBa0163B20.1+ SGN-U332042- 0.848 333 0.818 C PGS_C01HBa0163B20.1+_SGN-U332042- (45209 45541) Alignment (genomic DNA sequence = upper lines): TAACCAACAT GCCATCATAA CATAAATACA TTAAAAACAA ACT-AAAATT CATCGACATA 45267 |||| ||| |||||||||| ||| |||||| |||||||||| ||| || || |||| | | | TAACAGGCAT GCCATCATAA CATTAATACA TTAAAAACAA ACTGAATATC CATCAATACA 138 TTGATAAGCC ACACAACAAA AAAAGTGACA CACGGAAGGA TTGATTAACA ATCTAGGAAG 45327 ||||||||| | ||| || |||| ||||| || | | || | || | |||||||| GTGATAAGCC A--CAA-AA- AAAATTGACA CA-AAAGAAA GTGTTCAATA GGCTAGGAAG 193 AGGGAGGGGT TTGAGATAGG GACTGGATAA CAAGAGTGAG TCGTGCATTG GCAACATCAT 45387 |||| || | ||||| ||| |||||||||| |||||||||| |||||||||| ||| |||||| AGGGGGGAGG ATGAGACAGG GACTGGATAA CAAGAGTGAG TCGTGCATTG GCAGCATCAT 253 TATCCTTGAT GGCCTTTTCT TGCAGGGCAA TTATCTTCAC CTTCAACTCA TCATTATCTT 45447 |||| ||||| || ||||||| ||||||||| | || ||| | |||||||||| |||| || | TATCTTTGAT GGACTTTTCT TGCAGGGCAG TGATATTCGC CTTCAACTCA GCATTTTCCT 313 TCTCCAGAGC TTGAACAACT GAAGAACCAG GTCCCTCACT CTGTGCAGTA AGCAGTTCTG 45507 |||||| ||| ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCATAGC TTGAATCACT GAAGAACCAG GTCCCTCACT CTGTGCAGTA AGCAGTTCTG 373 CTTTGAGTAT AACAATTTCT GCCTCTTTAC CTCT 45541 |||||||||| | |||||||| ||||||||| | || CTTTGAGTAT AGCAATTTCT ACCTCTTTAC CACT 407 hqPGS_C01HBa0163B20.1+_SGN-U332042- (45209 45541) ******************************************************************************** EST sequence 52 -strand 805 n (File: SGN-U329213-) 1 TGAAAATTAA CTGCAAGCAA AATAAATACC AGAAATGATT TTATTAATGA ATCATTGTGA 61 GTACAATTCC TGGTTCTCCT GATTCTCTCT CNTAAGTTTC TCCGTGATTC GAGGGCCTTT 121 AGTAGCGTAT TTCTCGAATT GTTATAAGAT GTAGACCTCT TTGAGATTTT GTCGATCTCT 181 AGAACGTCGA AAAGCGCTTC GTCATTTTAA GTCGATCTCC GTGTAGAACT CCGTTGATCA 241 GCCCTTCGAA GAACTATTGA TGTTGATGTT GTAGCTTTCT CCAATTTGTT GAATGCTTGT 301 TGAAGAGTAT TCAGGATCCC CTTGAATGTC ATGTCTATCC CCTGTTTATA GTTGTAGGGA 361 GTGGACAAGG TTGCTTGCGA TCGGCCAGAT AATGTCATTT TGACACTTGA AACATTTCGA 421 TTCGTTCTTG TATTTGACAG GGACTACCAC CTCATTTGGA CACGTGGCGT CACCTTGTAG 481 GTCTTGAATT CTTAGTCAAT GTGACTCGTT GCATGGGTTT GGACTTCAAC GTGAAATGAA 541 CCTTGGATTT GAATTTAATA AGATGAAATT ATTTATTTGT AAAGCCCAAA TTACTTATTC 601 AGCCTAATGA ACATGGATTT AATTCAAATG ATATATGAAT TTGATCCAAT AAAATTTATG 661 TGTCAACAAG TGCCCATTAC TTTGAGGCTT GTCGACATAG AAGCTTGCCG ATGTTTGCAG 721 ACAAAACTTG AAGTAGCCAA GAATATTTTT TACGTTTTCT TGAGGACTTC TCTACGTGTA 781 GGTTTGCCAC ATTTTTACGA CAAAA Predicted gene structure (within gDNA segment 53594 to 59693): Exon 1 56385 57184 ( 800 n); cDNA 2 805 ( 804 n); score: 0.819 MATCH C01HBa0163B20.1+ SGN-U329213- 0.819 800 0.994 C PGS_C01HBa0163B20.1+_SGN-U329213- (56385 57184) Alignment (genomic DNA sequence = upper lines): GAAAATTAAC TGCAAGCAAA ATAAATAAAA AGAAAAATGT GATTCTATTA CTGAATCGTT 56444 |||||||||| |||||||||| |||||| | || |||| |||| ||||| |||||| || GAAAATTAAC TGCAAGCAAA ATAAAT-ACC AG--AAAT-- GATTTTATTA ATGAATCATT 56 GTGAGTACAA TTCAGTTGTT CTCTTGATTC TGTCTCCTAA GTTTCTCCGC GATTCGAGGG 56504 |||||||||| ||| | ||| ||| |||||| | |||| ||| ||||||||| |||||||||| GTGAGTACAA TTC-CTGGTT CTCCTGATTC TCTCTCNTAA GTTTCTCCGT GATTCGAGGG 115 CCTTCAGT-- --T-TTTCT- GAATTGTTGG ATGATGTAGA CCTCTTTGAG ATATTATCGA 56558 |||| ||| | ||||| |||||||| | |||||||| |||||||||| || || |||| CCTTTAGTAG CGTATTTCTC GAATTGTTAT AAGATGTAGA CCTCTTTGAG ATTTTGTCGA 175 TCTCCGGGAC ATTGGAAAGC GCTTCGTCGT TGT-AGTTGA TTTGCG-GTT GAACTCCGTC 56616 |||| | || | | ||||| |||||||| | | | ||| || | | || || ||||||||| TCTCTAGAAC GTCGAAAAGC GCTTCGTCAT TTTAAGTCGA TCTCCGTGTA GAACTCCGTT 235 GATCACTCCT TCGAAGAACT ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTTTTGAATG 56676 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GATCAGCCCT TCGAAGAACT ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTGTTGAATG 295 CTTGTTGAAG AGTATTCTAT CTCTCTTTGA ATGTCATGTC TAGCCCCTAT TTATAGTTGT 56736 |||||||||| ||||||| || | |||| |||||||||| || ||||| | |||||||||| CTTGTTGAAG AGTATTCAGG ATCCCCTTGA ATGTCATGTC TATCCCCTGT TTATAGTTGT 355 AGAGAGTGGA CAAGGTTGTT TGTGAT-TGT CAAATGATGT CATTTTGACA CTTGGCACAT 56795 || ||||||| |||||||| | || ||| | || || |||| |||||||||| |||| |||| AGGGAGTGGA CAAGGTTGCT TGCGATCGGC CAGATAATGT CATTTTGACA CTTGAAACAT 415 TTTGATTCGT TCTTGCATTT GACTGGGACT ACCACATCAT TTGGACACGT AGCGTCACCT 56855 || ||||||| ||||| |||| ||| |||||| ||||| |||| |||||||||| ||||||||| TTCGATTCGT TCTTGTATTT GACAGGGACT ACCACCTCAT TTGGACACGT GGCGTCACCT 475 TGTTGGTCTT AGATAATTAG TCATTGTGAC ACGTGTCATG GGTTTGGGCT TTAAGGTGAA 56915 ||| |||||| || |||| ||| |||||| ||| |||| ||||||| || | || ||||| TGTAGGTCTT GAATTCTTAG TCAATGTGAC TCGTTGCATG GGTTTGGACT TCAACGTGAA 535 ATGAACCTTG AATTTGAATT TAATAAGATG GACTTATTTA TTTGTAAAGC CCAAATTAAT 56975 |||||||||| ||||||||| |||||||||| | ||||||| |||||||||| |||||||| | ATGAACCTTG GATTTGAATT TAATAAGATG AAATTATTTA TTTGTAAAGC CCAAATTACT 595 TTTTCATCCC AAATGAACAT TGATTTAATT CAAATTTTGT ATGAATTTGA TCCAATACAA 57035 | |||| || ||||||||| ||||||||| ||||| | | |||||||||| ||||||| || TATTCA-GCC TAATGAACAT GGATTTAATT CAAATGATAT ATGAATTTGA TCCAATAAAA 654 TTTATTTGTC TACAAATGCC CCTTATTTTG AGGACTGTCG ATGTAGATGT TTGCCGAAGT 57095 ||||| |||| |||| |||| | ||| |||| ||| ||||| | |||| | ||||||| || TTTATGTGTC AACAAGTGCC CATTACTTTG AGGCTTGTCG ACATAGAAGC TTGCCGATGT 714 TTGGCGACAA GACTTGAAGT AGTCATGAAT GTGTTTTCCC TTTT-TTTA- GACTCCTCTG 57153 ||| ||||| ||||||||| || || |||| | |||| | |||| || | |||| |||| TTGCAGACAA AACTTGAAGT AGCCAAGAAT ATTTTTTACG TTTTCTTGAG GACTTCTCTA 774 TGTGTAGGCT TTCCAAATTT TGACGAAGAA A 57184 ||||||| | | ||| |||| | |||| || | CGTGTAGGTT TGCCACATTT TTACGACAAA A 805 hqPGS_C01HBa0163B20.1+_SGN-U329213- (56385 57184) ******************************************************************************** EST sequence 4 +strand 1903 n (File: SGN-U312517+) 1 ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 61 GTTGTTTCAT AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 121 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 181 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT 241 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 301 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 361 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 421 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 481 GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT 541 ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA 601 GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC 661 ACCACCCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC 721 ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC 781 AGTAACCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT 841 GGAGGCGGAC AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCCCAG GAGCAGTCCA 901 ACTCCTTTCG TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTGA AATCGAAAAG 961 AACATGCTAA ATGTTGTGCT TATTGGTGAA GGCCCAACCA AGACCATAAT CACCGGTGAC 1021 CAGGCAGTAG TTCCTAACCG TATATCAACA TGGCATACAG CCACCCTTGG TGTTTGTGGT 1081 GATGGTTTCG TTATGAAGGA CATGGGTATT GAAAACACAG CAGGACCCAC AAAAGAACAA 1141 GCCGTTGCAT TGAGAATTAA TGCCGATAGG GCTGTTCTCT ACAACTGCAA TATCGATGGT 1201 TACCAAGACA CGTTATACGC TCACTCAGGA AGACAATTTT ATCGTGATTG TACCATTACA 1261 GGCACCATTG ATTTCTTGTT TGGTGATGCA AGTGCTGTTT TCCAAAACTG CAAATTGATT 1321 GTGAGGAAAC CAGGTCCTAA TCAAGCTTGC ATGATCACTG CTCAAGGAAG GATGAGAAAA 1381 GATTCCTTTG GTACATTCGT TATCCAGAAT TGTGACATCA AGGCTGATCC AGCACTCACT 1441 AGCGCCAATC CACCAGTCAA AGTCTATCTT GGACGTCCAT GGAAGGAGTT TTCCAAGACC 1501 ATCATAATGC AATCAAACAT CGATGGATTC GTCGATCCAT CAGGATGGTC ACCATGGAAC 1561 ACAACTGATT TTGGAATACA CACATGTTTT TATGCAGAGT ATCAGAACAG AGGACCAGGT 1621 GCTGCACTTG ACAAAAGAGT CTCCACATGG AGAGGTTACC AAAAGGATAT TTCAGGAGAC 1681 GTTATTAACA GCTTCACTGC CGGTAAATTC ATTAATACAC AACAGCCATG GTTACCAGTG 1741 TTTGATATTC CCTATGAAGC TGGCATGATG AAGGTGTAAT TGCATATACC ATTCACCCTG 1801 TAATTTTTTC TAATTATTCA AAATTATATT TCCTAAAAAA AAAAAAAAAA AAAAAAAAAA 1861 AAAAAAATTG ACAAGTGCTG GAAAAGTGAA CCTTTCTGGG CTG Predicted gene structure (within gDNA segment 62693 to 66418): Exon 1 63293 65127 (1835 n); cDNA 1 1834 (1834 n); score: 0.986 PPA cDNA 1853 1868 MATCH C01HBa0163B20.1+ SGN-U312517+ 0.986 1835 0.964 C PGS_C01HBa0163B20.1+_SGN-U312517+ (63293 65127) Alignment (genomic DNA sequence = upper lines): ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 63352 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 60 GTTGTTTCAT AGGGAACTCC CCCCATAAAA AAAAATCCAA AAAAACAAAA AAACCAAAAA 63412 |||||||||| |||||||||| |||||| ||| |||||||||| ||||| ||| |||||||||| GTTGTTTCAT AGGGAACTCC CCCCAT-AAA AAAAATCCAA AAAAATCAAA AAACCAAAAA 119 AATGACAAAG AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT 63472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGACAAAG AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT 179 GGCAGCCTGT GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC 63532 |||||||||| |||||||||| |||||||||| |||||| | |||||||||| |||||||||| GGCAGCCTGT GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG GAGTTGCAAC 239 TTCAACAAAG TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA 63592 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAACAAAG TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA 299 GACCCTCTCC GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA 63652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCCTCTCC GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA 359 AGCCACTGTG GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC 63712 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCACTGTG GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC 419 CAGTGATCCT TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT 63772 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTGATCCT TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT 479 TGAGGAACTA AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA 63832 |||||||||| ||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TGAGGAACTA AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA 539 TATAGTGGAT GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT 63892 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATAGTGGAT GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT 599 AGATGGTTTC ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG 63952 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGGTTTC ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG 659 TACCACCCGG GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT 64012 ||||||||| |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| CACCACCCGG GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT 719 CACACAAAAC ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC 64072 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACACAAAAC ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC 779 TAGTAACCGT AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG 64132 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAGTAACCGT AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTGCCAG 839 TGGAGGCGGA CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC 64192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAGGCGGA CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC 899 AACTCCTTTC GTTATCCTGA TCAAGGCGGG TACATACAAG GAACACATTG AAATCGAAAA 64252 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTCCTTTC GTTATCCTGA TCAAGGCGGG TACATACAAG GAACACATTG AAATCGAAAA 959 GAACATGCTA AATGTTGTGC TTATTGGTGA AGGCCCAACC AAGACCATAA TCACCGGTGA 64312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACATGCTA AATGTTGTGC TTATTGGTGA AGGCCCAACC AAGACCATAA TCACCGGTGA 1019 CCAGGCAGTA GTTCCTAACC GTATATCAAC ATGGCATACA GCCACCCTTG GTGTTTGTGG 64372 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGGCAGTA GTTCCTAACC GTATATCAAC ATGGCATACA GCCACCCTTG GTGTTTGTGG 1079 TGATGGTTTC GTTATGAAGG ACATGGGTAT TGAAAACACA GCAGGACCCA CAAAAGAACA 64432 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGTTTC GTTATGAAGG ACATGGGTAT TGAAAACACA GCAGGACCCA CAAAAGAACA 1139 AGCCGTTGCA TTGAGAATTA ATGCTGATAA GGCTGTTCTC TACAACTGCA ATATCGATGG 64492 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| AGCCGTTGCA TTGAGAATTA ATGCCGATAG GGCTGTTCTC TACAACTGCA ATATCGATGG 1199 TTACCAAGAC ACGTTATATG CTCACTCAGG AAGACAATTT TATCGTGATT GTACCATTAC 64552 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TTACCAAGAC ACGTTATACG CTCACTCAGG AAGACAATTT TATCGTGATT GTACCATTAC 1259 AGGCACCATT GATTTCTTGT TTGGTGATGC AAGTGCTGTT TTCCAAAACT GCAAATTGAT 64612 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCACCATT GATTTCTTGT TTGGTGATGC AAGTGCTGTT TTCCAAAACT GCAAATTGAT 1319 TGTGAGGAAA CCAGGTCCTA ATCAAGCTTG CATGATCACT GCTCAAGGAA GGATGAGAAA 64672 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGAGGAAA CCAGGTCCTA ATCAAGCTTG CATGATCACT GCTCAAGGAA GGATGAGAAA 1379 AGATTCCTTA GGTGGATTCG TTATCCAAAA TTGTGACATC AAGGCTGATC AAGCACTCAC 64732 ||||||||| ||| ||||| ||||||| || |||||||||| |||||||||| ||||||||| AGATTCCTTT GGTACATTCG TTATCCAGAA TTGTGACATC AAGGCTGATC CAGCACTCAC 1439 TAGCGCCAAT CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT TTTCCAAGAC 64792 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGCCAAT CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT TTTCCAAGAC 1499 CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 64852 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CATCATAATG CAATCAAACA TCGATGGATT CGTCGATCCA TCAGGATGGT CACCATGGAA 1559 CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 64912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 1619 TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 64972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 1679 CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 65032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAGT 1739 GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 65092 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||| ||| GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTGCATATAC CATTCACCCT 1799 GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 65127 |||||||||| |||||||||| |||||||||| ||||| GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 1834 hqPGS_C01HBa0163B20.1+_SGN-U312517+ (63293 65127) ******************************************************************************** EST sequence 9 +strand 947 n (File: SGN-U333615+) 1 GCAAGGGCNN NNAGGGNGGG TTNNTTACGT AAACTCCTGT ATGTAAACTC TGTGACTCCA 61 CCGCGGTGGC GTGCCGCTCT ACAACTAGTG GATCCACCGG GCTGCAAGAA GGGAACTCCC 121 CCCATTAAAA AAATCCAAAA AAATCAAAAA AACCAAAAAA ATGACAAACA ATGTGGTAAT 181 TGGTGGAATA TCTACTGTTC TTGTGGTGAC TAGTGTGGTA CTAGCATAAC TCACCCTGAC 241 TAAACATGAT TCTGACCCTT CATCAAATGG ATTTGCAAAC TTAACAAAAT AACTAAGATC 301 TATGTGTCAA CCCACACCAT ACAAACAAAC TAGTGAAAAA ACCCTATGCG CAGCAAAGAA 361 TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA 421 GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA 481 CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT 541 CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC 601 ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA 661 ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG AACTAAATAG 721 CAATGCTCTT TCCATGGTCA ACAACTTCGG TGAAATGATC ACACAAAACA CAAGCCTTTA 781 CCGCAAATTG TAATCAAACA ATGACTTATT TGTCGAAACC AGTAAACCTA AACTTCCTTC 841 AAATTTCTGC CTTCAAACCT AATGCTTTGG TTTTTTGCAA TGGAGGCGGC CAATTCAAAA 901 ACATTCCGGA AGGACTTTAA AGCTGTCCCC AAGACCCATC CAACTTC Predicted gene structure (within gDNA segment 61673 to 66385): Exon 1 63351 64196 ( 846 n); cDNA 99 945 ( 847 n); score: 0.904 MATCH C01HBa0163B20.1+ SGN-U333615+ 0.904 846 0.893 C PGS_C01HBa0163B20.1+_SGN-U333615+ (63351 64196) Alignment (genomic DNA sequence = upper lines): GGGTTGTTTC ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAA-CA AAAAAACCAA 63409 ||| || | |||||||| |||||||| |||||||||| ||||||| || |||||||||| GGGCTGCAAG A-AGGGAACT CCCCCCAT-T AAAAAAATCC AAAAAAATCA AAAAAACCAA 156 AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 63469 |||||||||| || || |||| |||||||||| |||| || || |||||||||| || || |||| AAAAATGACA AACAATGTGG TAATTGGTGG AATATCTACT GTTCTTGTGG TGACTAGTGT 216 GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC 63529 ||| ||| | |||||| |||||||||| ||||||||| | ||||||| ||||| |||| GGTACTAGCA TAACTCACCC TGACTAAACA TGATTCTGAC CCTTCATCAA ATGGATTTGC 276 AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 63589 || | |||| || | | | ||||||||| |||||||||| |||||||||| ||||| |||| AAACTTAACA AAATAACTAA GATCTATGTG TCAACCCACA CCATACAAAC AAACTAGTGA 336 AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT 63649 ||| ||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAACCCTA TGCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT 396 CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 63709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 456 TGCCAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 63769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 516 CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA 63829 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| | |||||||| CGTTGAGGAA CTAAGGGGCT CTGTCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 576 GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 63889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 636 TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 63949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 696 GAGTACCACC CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT 64009 ||| |||||| ||||| || | ||||||||| |||||||||| |||||||||| | |||||||| GAGCACCACC CGGGAACTAA ATAGCAATGC TCTTTCCATG GTCAACAACT TCGGTGAAAT 756 GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 64069 |||||||||| |||||| ||| || |||||| ||||| |||| |||| ||||| ||||||||| GATCACACAA AACACAAGCC TTTACCGCAA ATTGTAATCA AACAATGACT TATTTGTCGA 816 AGCTAGTAAC CGTAAGC-TC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA 64128 | | ||||| | ||| | || |||||||||| |||||| ||| ||||||||| |||||| | AACCAGTAAA CCTAAACTTC CTTCAAATTT CTGCCTTCAA ACCTAATGCT TTGGTTTTTT 876 CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCAC- TTCAAGCTGT CCCCAGGAGC 64187 || |||||| ||| |||| | || | ||||| ||||| || || ||||||| ||||| || | GCAATGGAGG CGGCCAATTC AAAAACATTC CGGAAGGACT TTAAAGCTGT CCCCAAGACC 936 AGTCCAACT 64196 ||||||| CATCCAACT 945 hqPGS_C01HBa0163B20.1+_SGN-U333615+ (63351 64196) ******************************************************************************** EST sequence 7 +strand 948 n (File: SGN-U333614+) 1 GAGCCCCCGG CTTGTGNNGC TGATACCNCT GATANNTCAG TAACAATGCA GAGCTCCCCG 61 CGTGGCGGAC GCTCTAGAAC TAGTGGATCC CCCGGCCTGC AGGAATTCGG CACGAGGAAA 121 ACACCAAAAA AATGACAAAG AATGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG 181 CTTTGAGTGC GGTATCCTTT GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG 241 GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA 301 CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG 361 TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA 421 AGAAAGCTGC CAGTGATCCT TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG 481 ATCTAGCCGT TGAGGAACTA AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA 541 AGATGAAAGA TATAATGGAT GACCTCAAGT CATGGCTTAA CGCTGTCGTT GCTTATGAAG 601 AGACTTGTTT AGATGGTTCA ACAAATCAAA ATACAGTGCA ACCCCTGACG AAATGATGAA 661 GCTAATGAAC CCACCCGGGA ACTTAATAGC AATGCTCTTT TCATGGTCAA CAGCTTCGGT 721 GAAATGATTA CCCAAACACC AGCCCTTACC CGCAAATGGT TTCAAACAGG GACTCATTTT 781 TCGAACCAGT AACCGGACCT CCTTTAATTT TTGCCTCCAA CCTAAGCTTG GGTTTTTGCC 841 ATGGGGCCGC CATTCAAAAC CTTTGGAAGC CTTTAACTTG CCACGAACGG TCAATTCTTT 901 GTTTTCTTAT AAGGGGGCCC TCAGGAACCT TTAATTCAAA AAAGTCTT Predicted gene structure (within gDNA segment 61585 to 67810): Exon 1 63400 64154 ( 755 n); cDNA 118 861 ( 744 n); score: 0.917 MATCH C01HBa0163B20.1+ SGN-U333614+ 0.917 755 0.796 C PGS_C01HBa0163B20.1+_SGN-U333614+ (63400 64154) Alignment (genomic DNA sequence = upper lines): AAAAAACCAA AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG 63459 |||| ||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| AAAACACCAA AAAAATGACA AAGAATGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG 177 TGGC-TTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA 63518 |||| ||| | | | || | | || ||||||| |||||||||| |||||||||| | |||||| TGGCTTTGAG T-GCGGTATC CTTTGTCACC CTGACTAAAC ATGATTCTGA CCCTTCATCA 236 AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA 63578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA 296 CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC 63638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC 356 AAGGTTGCAT TCGAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA 63698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTTGCAT TCGAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA 416 GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG 63758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG 476 TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC 63818 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTGTCGCTA GGATTGAGAA CTTTGATTTC 536 TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT 63878 || ||||||| | |||||| | |||||||||| |||||||||| ||| |||||| |||||||||| TCTAAGATGA AAGATATAAT GGATGACCTC AAGTCATGGC TTAACGCTGT CGTTGCTTAT 596 GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG 63938 |||||||||| |||||||||| |||| |||| ||| |||||| ||||||||| |||||||||| GAAGAGACTT GTTTAGATGG -TTCAACAAA TCAAAATACA GTGCAACCCC TGACGAAATG 655 ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC 63998 |||||||||| ||| |||| |||||| || | |||||||| |||||| ||| |||||||| | ATGAAGCTAA TGA-ACCCAC CCGGGAACTT AATAGCAATG CTCTTTTCAT GGTCAACAGC 714 TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC 64058 || ||||||| |||| || || || ||| | |||||||||| ||| ||| || |||||| ||| TTCGGTGAAA TGATTACCCA AACACCAGCC CTTACCCGCA AATGGTT-TC AAACAGGGAC 773 TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT 64118 |||||| ||| || | ||||| ||| | ||| ||| ||||| ||||||||| ||||| ||| TCATTTTTCG AA-CCAGTAA CCG-GACCTC CTT-TAATTT TTGCCTCCAA -CCTAA-GCT 828 GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACC 64154 ||||| | ||| ||| || | | | || | || ||| TGGGTTTTTG CCA-TGG-GG CCG-CCATTC AAAACC 861 hqPGS_C01HBa0163B20.1+_SGN-U333614+ (63400 64154) ******************************************************************************** EST sequence 38 +strand 638 n (File: SGN-U323900+) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TTGATGTCAA AAAAAAAA Predicted gene structure (within gDNA segment 73415 to 66438): Exon 1 72025 71957 ( 69 n); cDNA 80 148 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 149 166 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 167 200 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 201 242 ( 42 n); score: 0.727 PPA cDNA 629 638 MATCH C01HBa0163B20.1- SGN-U323900+ 0.971 168 0.263 C PGS_C01HBa0163B20.1-_SGN-U323900+ (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 148 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 148 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 148 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 148 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 148 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 148 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 148 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 148 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 148 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 148 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 148 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 148 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 148 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 148 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 148 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 148 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 148 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 148 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 148 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 148 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 148 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 148 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 148 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 148 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 148 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 148 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 152 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 166 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 166 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 166 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 166 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 166 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 166 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 166 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 166 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 166 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 166 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 166 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 166 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 166 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 166 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 166 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 166 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 166 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 166 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 166 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 166 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 166 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 166 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 166 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 166 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 166 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 166 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 166 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 166 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 166 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 166 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 166 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 166 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 166 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 166 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 166 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 166 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 166 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 166 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 166 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 166 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 166 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 166 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 166 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 200 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 200 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 200 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 200 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 200 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 200 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || .......... .......... .......... .......... ........AA GCTTGGAA-T 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 | ||| || | |||| |||| || ||| | || CGAGA-AGTT TGATGGATTC AATTTCAGTT TC 242 hqPGS_C01HBa0163B20.1-_SGN-U323900+ (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 3 -strand 1903 n (File: SGN-U312517-) 1 CAGCCCAGAA AGGTTCACTT TTCCAGCACT TGTCAATTTT TTTTTTTTTT TTTTTTTTTT 61 TTTTTTTTTA GGAAATATAA TTTTGAATAA TTAGAAAAAA TTACAGGGTG AATGGTATAT 121 GCAATTACAC CTTCATCATG CCAGCTTCAT AGGGAATATC AAACACTGGT AACCATGGCT 181 GTTGTGTATT AATGAATTTA CCGGCAGTGA AGCTGTTAAT AACGTCTCCT GAAATATCCT 241 TTTGGTAACC TCTCCATGTG GAGACTCTTT TGTCAAGTGC AGCACCTGGT CCTCTGTTCT 301 GATACTCTGC ATAAAAACAT GTGTGTATTC CAAAATCAGT TGTGTTCCAT GGTGACCATC 361 CTGATGGATC GACGAATCCA TCGATGTTTG ATTGCATTAT GATGGTCTTG GAAAACTCCT 421 TCCATGGACG TCCAAGATAG ACTTTGACTG GTGGATTGGC GCTAGTGAGT GCTGGATCAG 481 CCTTGATGTC ACAATTCTGG ATAACGAATG TACCAAAGGA ATCTTTTCTC ATCCTTCCTT 541 GAGCAGTGAT CATGCAAGCT TGATTAGGAC CTGGTTTCCT CACAATCAAT TTGCAGTTTT 601 GGAAAACAGC ACTTGCATCA CCAAACAAGA AATCAATGGT GCCTGTAATG GTACAATCAC 661 GATAAAATTG TCTTCCTGAG TGAGCGTATA ACGTGTCTTG GTAACCATCG ATATTGCAGT 721 TGTAGAGAAC AGCCCTATCG GCATTAATTC TCAATGCAAC GGCTTGTTCT TTTGTGGGTC 781 CTGCTGTGTT TTCAATACCC ATGTCCTTCA TAACGAAACC ATCACCACAA ACACCAAGGG 841 TGGCTGTATG CCATGTTGAT ATACGGTTAG GAACTACTGC CTGGTCACCG GTGATTATGG 901 TCTTGGTTGG GCCTTCACCA ATAAGCACAA CATTTAGCAT GTTCTTTTCG ATTTCAATGT 961 GTTCCTTGTA TGTACCCGCC TTGATCAGGA TAACGAAAGG AGTTGGACTG CTCCTGGGGA 1021 CAGCTTGAAG TGCTTCCTGA ATGGTCTTGT ATTGTCCGCC TCCACTGGCA GAAACCACAG 1081 CATTAGGCTT GGAGGCAGAA ATTTGAAGGA GCTTACGGTT ACTGGCTTCG ACAAATGAGT 1141 CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT TCACCGAAGC 1201 TGTTGACCAT GGAAAGAGCA TTGCTACTCA GCTCCCGGGT GGTGCTCATT AGCTTCATCA 1261 TTTCGTCACG GGTTGCACTG TATTCTGATT TGGTGAAACC ATCTAAACAA GTCTCTTCAT 1321 AAGCAACGAC AGCGCTAAGC CATGACTTGA GGTCATCCAC TATATCCTTC ATCTTAGAGA 1381 AATCAAAGTT CTCAATCCTA GCGACAGAGC CCCTTAGTTC CTCAACGGCT AGATCAAACA 1441 CCTCTTCACA AGCAAGGAGA GCGTCTTTGG TGTAAGGATC ACTGGCAGCT TTCTTAACTG 1501 GCTCAGTGTT CTTGATGGCA TTCTTGATGT CTGCCACAGT GGCTTCGAAT GCAACCTTGA 1561 TGTAGTCCTT TGGATCGGAC ACATTCTTTG CTGCGGAGAG GGTCTTTTCA CAAGTTTGTT 1621 TGTATGGTGT GGGTTGACAC ATAGATTCAA CTGACTTTGT TGAAGTTGCA ACTCCATTTG 1681 ATGAAGGGTC AGAATCATGT TTAGTCAGGG TGACACAGGC TGCCACCACA CAAGCCACCA 1741 CAAGAACAGA AGCTATTCCA CCAATTACCA CCTTCTTTGT CATTTTTTTG GTTTTTTGAT 1801 TTTTTTGGAT TTTTTTTATG GGGGGAGTTC CCTATGAAAC AACCCCTATG GTTCTTCTTG 1861 TAAGTGAAGA ACTCAGAGGG GTTTTATTGA AGGCTGTGTT TAT Predicted gene structure (within gDNA segment 79909 to 64907): Exon 1 78224 78209 ( 16 n); cDNA 91 106 ( 16 n); score: 0.688 Intron 1 78208 76977 (1232 n); Pd: 0.949 (s: 0), Pa: 0.000 (s: 0.76) Exon 2 76976 76576 ( 401 n); cDNA 107 515 ( 409 n); score: 0.784 Intron 2 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 3 74693 74687 ( 7 n); cDNA 516 521 ( 6 n); score: 0.714 Intron 3 74686 72321 (2366 n); Pd: 0.844 (s: 0), Pa: 0.929 (s: 0) Exon 4 72320 72316 ( 5 n); cDNA 522 526 ( 5 n); score: 0.600 Intron 4 72315 71957 ( 359 n); Pd: 0.000 (s: 0), Pa: 0.788 (s: 0.78) Exon 5 71956 71600 ( 357 n); cDNA 527 891 ( 365 n); score: 0.725 Intron 5 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 6 71110 70587 ( 524 n); cDNA 892 1419 ( 528 n); score: 0.845 Intron 6 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 7 69080 69050 ( 31 n); cDNA 1420 1449 ( 30 n); score: 0.742 PPA cDNA 50 36 MATCH C01HBa0163B20.1- SGN-U312517- 0.793 1341 0.705 C PGS_C01HBa0163B20.1-_SGN-U312517- (78224 78209,76976 76576,74693 74687,72320 72316,71956 71600,71110 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TTGTAAAACC TTAAAGGTAA GCTCTTGATG CTCACAGATC GCATGAACTA TTTGTCATAT 78165 || |||| ||| || TTAGAAAAAA TTACAG.... .......... .......... .......... .......... 106 GAATTGTGTT TAGCTGATGT AATGTTGGCT TGGGTCTTGT CTACCATGTG CAAAGTGGGA 78105 .......... .......... .......... .......... .......... .......... 106 GATGTAAGTT TTGTATTTGG GTCGCCCATG TGGATTGACC CGACCCGAAC AAACCCAAAA 78045 .......... .......... .......... .......... .......... .......... 106 TTTCTTTTAA TAGAAAGAAA AGAGAAAAAG ATAAGTATTA ATTTAAAAAA GGGGTGGGAA 77985 .......... .......... .......... .......... .......... .......... 106 CAGTCACATG TAACTATTCC AACGTTAATA ATTACCTTTT TTAAATTAAA TTCTTTTTGG 77925 .......... .......... .......... .......... .......... .......... 106 CTTTTTCTTT TGATTAACGG TTCAGAAAGT GAAAAAAAAC ACAAAAAATA CCAATAAACA 77865 .......... .......... .......... .......... .......... .......... 106 ACTCTAAAGT TTAGACTAAA CCACAATAAG ACATTTAGTT TGTGAAACTA TCTTTGTTTC 77805 .......... .......... .......... .......... .......... .......... 106 CTAGTGATTC AAAGAAGGAT TTGGAGAAAA TCATTCAATT CGTGAATTTT TATTCCGCTG 77745 .......... .......... .......... .......... .......... .......... 106 CAACAATAAG AAGTACACAA ATCTTGTACT AAATGTTGTT TAAATACTTT CATTGCTGGT 77685 .......... .......... .......... .......... .......... .......... 106 TTAATTTCAG TCTCATTCAC TCCATCTTCG TCTCAATTAG CCGATTTATT CACCAAGCCC 77625 .......... .......... .......... .......... .......... .......... 106 TTAACAGAGA CTCTTCACAA TAACCTTTCT GGCAAGTTGG GTGTGTTTTC CTCGCCCTCC 77565 .......... .......... .......... .......... .......... .......... 106 AACTTAAGGG GGGAGGTGGT GGTGTAGATA ATGGTGAAAC AGTTATAAAG ACAGAGGTTC 77505 .......... .......... .......... .......... .......... .......... 106 ACTAAGTTTA TGAAGATTAG TCATATATAT ATATATATAT ATATATATAT ATATATATAT 77445 .......... .......... .......... .......... .......... .......... 106 ATATATATAT ATATATATAT TATTCCTTGT AATTAATTAT CTTTTAATTT TTTAAACAAA 77385 .......... .......... .......... .......... .......... .......... 106 GTAGGACACT TAGTTTGTTA GATTAAGTAA GACAGGTTTT ATTGTTGGTC AGTCATGTTC 77325 .......... .......... .......... .......... .......... .......... 106 TCAATTATCT TTACTCAGTT TGTTGTTCAC GTATTTCGTA GTTGTATATA TATGCATCTG 77265 .......... .......... .......... .......... .......... .......... 106 CACAATGATG TCAAACATAC AGAAAAGAGA ATTTTCTCCC AATCAATTTC TTGCTACCTT 77205 .......... .......... .......... .......... .......... .......... 106 TTTTTTCAGT AACTTGGCCT GATCTTAATA CTTTTACTGT TTTTTTAAAT TTCATTTCGT 77145 .......... .......... .......... .......... .......... .......... 106 ACAATGTTGA TTTGATACAA AGAAAAATGG TTGTATTTCA TGTGGAGTCA TATATAGGTG 77085 .......... .......... .......... .......... .......... .......... 106 GATAGAAAAA ACATATTATT ATCATCTTAA TATTGTGTGA ATATAAGATG TCTAAAGAAA 77025 .......... .......... .......... .......... .......... .......... 106 GGAGCAAAAA TATATTAATT ATCTAAAACA AAATAGTCCT TGTATGGAAA TAAATGATAT 76965 | |||| ||| .......... .......... .......... .......... ........GG TGAATGGTAT 118 AGGTTAATTA GACCTTCATA ATGCCAGGCT CAAAGGGAAT ATCACTCTTG GGTAGCCAAG 76905 | | ||||| |||||||| ||||||| | || ||||||| |||| | |||| ||| | ATG-CAATTA CACCTTCATC ATGCCAGCTT CATAGGGAAT ATCAAACACT GGTAACCATG 177 GGTCTCTTGT GTTGATGAAA TTGCCGTCAA TGAATTGGTT AATAGTGTCT CCTGAAATTC 76845 | | | ||| || ||||| || ||| || |||| ||| |||| |||| |||||||| GCTGTTGTGT ATTAATGAAT TTACCGGCAG TGAAGCTGTT AATAACGTCT CCTGAAATAT 237 CCTTTTGGTA ACCTCTCCAT GTTGAGATTT TTTTGTCAAG TGCAGCACCT GGTTCTCTGT 76785 |||||||||| |||||||||| || |||| | |||||||||| |||||||||| ||| |||||| CCTTTTGGTA ACCTCTCCAT GTGGAGACTC TTTTGTCAAG TGCAGCACCT GGTCCTCTGT 297 TCTGATACTC TGCAT-AAAA CATGTGTGTT TTCCAAAATT AGTTGTGTTC CATGGTGACC 76726 |||||||||| ||||| |||| ||||||||| ||||||||| |||||||||| |||||||||| TCTGATACTC TGCATAAAAA CATGTGTGTA TTCCAAAATC AGTTGTGTTC CATGGTGACC 357 ATCCTGATGG ATCGATGAAT GCATCAATGT TTGATTGCAT TATGATGGTC TTGGAATACT 76666 |||||||||| ||||| |||| |||| |||| |||||||||| |||||||||| |||||| ||| ATCCTGATGG ATCGACGAAT CCATCGATGT TTGATTGCAT TATGATGGTC TTGGAAAACT 417 CCTTCCATGG ACGTCCAATA TAGGC-TT-- -T--T--AAT GGTGCTAGGG AACCCTGCCT 76614 |||||||||| |||||||| | ||| | || | | | | || ||||| | | ||| | CCTTCCATGG ACGTCCAAGA TAGACTTTGA CTGGTGGATT GGCGCTAGTG AGTGCTGGAT 477 GAGGCTTGAT GTCACAATTC TGGATAACTA ATCCAGAGGT ACTATCTTGT TTATGTTAAG 76554 || |||||| |||||||||| |||||||| | || | CAGCCTTGAT GTCACAATTC TGGATAACGA ATGTACCA.. .......... .......... 515 TAGTGGAGCC TGATTAATAT ATATAACTCT TTACGCAATT TCCGCGGTGA GGTTACCGGG 76494 .......... .......... .......... .......... .......... .......... 515 GGTTATGGGG GTGGGAGCCC CCCATCCGAA GGAGGGGTTC AGGGCAGCGA CCCGACCTAA 76434 .......... .......... .......... .......... .......... .......... 515 ATTTTAGGCT TTCCTATTTA TTCTCTATTT ATTCTCTGTA ACCAAAAAAA CTCTGATTTA 76374 .......... .......... .......... .......... .......... .......... 515 TTAATATAAA TATACCTCAC GACCGTGGAA GTTTACTCAC GGGGTGTTAC CACAAAATAT 76314 .......... .......... .......... .......... .......... .......... 515 TGGGTTTTCT CTTTCTAGAT CTCTCATCTC TTTCTTTTAA AAGTTCTTGT GTTTTCATTC 76254 .......... .......... .......... .......... .......... .......... 515 ATCTAGTGTG TGTGCTTTAA TTCGATCCTA ACAACTGGCA TCAGAGATAA GGAGATACAA 76194 .......... .......... .......... .......... .......... .......... 515 CACGATCACT GAAGATGGAT AGTTTGAAGC TTGGAATCGA GAAGTTTGAT GGATCCGATT 76134 .......... .......... .......... .......... .......... .......... 515 TTAGTTTCTG GAAGATGCAG ATCAAAGATT ATCTGTACCA GAAAGATCTT CATAAACCGT 76074 .......... .......... .......... .......... .......... .......... 515 TGACCAGGGT GAAACCGGAA TCCATGACGG AGGAGAAGTG GAAACTCAAG GATCGCCAGG 76014 .......... .......... .......... .......... .......... .......... 515 CTCTAGGGTT GATCCGGTTG ACTTTGTCAA GAAACGTGGC GTTCAACATT GTGAAGACGT 75954 .......... .......... .......... .......... .......... .......... 515 TCGGTCTGTT GAAGGAACTG TCAAACATGT ATGAAAAACC ATCGGCTATG AACAAGGTAT 75894 .......... .......... .......... .......... .......... .......... 515 ATTTGATGCG TAGATTGTTC AATTTACAGA TGTATGAGAA TGGATCTGTT TCTGATCATA 75834 .......... .......... .......... .......... .......... .......... 515 TAAACGAGTT TAATATGATT GTGAGTCAAC TCAATTCTGT GGATATCAAT TTCGAAGATG 75774 .......... .......... .......... .......... .......... .......... 515 AAATTAAGGC GTTGATTTTG TTGTCATCTC TGCCCGAGTC TTGGGATACT ATTGTTGCTG 75714 .......... .......... .......... .......... .......... .......... 515 CGATTCGCAG TTCCCGTGGA TCTGAGAAAC TGAAGTTTGA TAAAATCCAT GATGTTGTTC 75654 .......... .......... .......... .......... .......... .......... 515 TTAGCGAAAG TATTCACAAA TGAGAAGTGG GAAATTCATT GGGCAGTGCT CTCAGCGTTG 75594 .......... .......... .......... .......... .......... .......... 515 ATCGAAGGGG GAGAAGTAAG ACGAAAGGCC AAAATCAACA TGGTCGATCA AAATCAAAGA 75534 .......... .......... .......... .......... .......... .......... 515 ATCGAGAAAA ATCCCTGAAG ATCAAACGTG ACTTGTTGGA ACTGTAAAGA AAAAGGGCAC 75474 .......... .......... .......... .......... .......... .......... 515 TTTTAGACGA ACTATACAAA GCAAAAGAAG AAACAAAATC ACAAAATTTG GAGATGACAA 75414 .......... .......... .......... .......... .......... .......... 515 TGATTCTGTA AATTCATCAG AGGACATTGG GGATGCTCTA ATCCTTAGTG TGAATAGCCC 75354 .......... .......... .......... .......... .......... .......... 515 GGTTGAATCA TGGATTTTGG ATTCTGGTGC ATCTTTCCAT TCATCTTCAA GCAAGGAGTT 75294 .......... .......... .......... .......... .......... .......... 515 GTTCCAAAAT TTCAAATCTG GAAATTTTGG AAAAGTATAT CTTGTTGACA ATAAAGCCTT 75234 .......... .......... .......... .......... .......... .......... 515 AGAGATTGAA GGAAAGGGGG ATGTTTGCAT AAAGACCACC TCGGGAAACC AATGGACATT 75174 .......... .......... .......... .......... .......... .......... 515 GGAGGATGTC AGATATATTC CTGGGATCAA CAAAAAATTG ATCTCTGTCG GTCAGTTGGA 75114 .......... .......... .......... .......... .......... .......... 515 TAGCACGGGA TATGCAGCAG AGTTAGGGAA ATGTTCGTGG AAGATCATGA AAGTTGCTAT 75054 .......... .......... .......... .......... .......... .......... 515 GGTAGTAGCT CGTGGCACCA AATCTGGAAC CTTGTACACC ACTGCAGAGT GTATAAACTA 74994 .......... .......... .......... .......... .......... .......... 515 GGTCGCTGTT GCTGAAGGTG TTTCCGGTTC ATGTCTGTGG CACAACAGAC TTGGACACAT 74934 .......... .......... .......... .......... .......... .......... 515 GAGTACTAAA GGAATGAAGA TGTTGGTTGC AAAAGGAGAA TTAGAGGGTC TGAAGTCTGT 74874 .......... .......... .......... .......... .......... .......... 515 TGATATGGGT CTTTGCGAGA GCTGTGTTAT GGGAAAACAG AAAAGAGTAA GCTTCACAAG 74814 .......... .......... .......... .......... .......... .......... 515 GACTCCTAGA GAGCCAAAGA AAGTGCGGTT GGAAATGGTC CATATAGATG TTTGGGGACC 74754 .......... .......... .......... .......... .......... .......... 515 ATATCCAGTA TCATTACTTG GAGGATCCAG ATTCTATGTT ACCTTCATTG ATGATTTCAG 74694 .......... .......... .......... .......... .......... .......... 515 CAGGAAGGTA TCGGTTTACT TCTTGAAGCA TAAGTTAGAT GTGTTTGCAA CTTTCAAGAA 74634 ||||| AAGGAA-... .......... .......... .......... .......... .......... 521 GTGGAAAGCT GAAGTTGAGA ATCAGATCGG TTTGAAAGTC AAATGCCTAA GGTCTGACAA 74574 .......... .......... .......... .......... .......... .......... 521 TGGAGGAGAG TATGACAAAT CAGAGTTCAA GGCATTCTGT GCAGTTGACG GAATCAGATT 74514 .......... .......... .......... .......... .......... .......... 521 GATGAGAACA GTTCCTGGTG AGGCAAGGCA GAATAGAATT GTTGAGAGGA TGAACAGAAC 74454 .......... .......... .......... .......... .......... .......... 521 ATTGAATGAG CTTGAAAGGA GTATGAGGAT ACACTGTGGG CTGCCCAAAA CACTTTGGGC 74394 .......... .......... .......... .......... .......... .......... 521 GGATGTTGTG AGCAAAGTTG CATACTTGAT CAATAGGGGA CCATCAGTTC CTTTAGGGTT 74334 .......... .......... .......... .......... .......... .......... 521 CAAGATTCCA GAGGAGGTGT GGACAGGAAA AGAACTTAAG TACTCACACT TGAGGACTTT 74274 .......... .......... .......... .......... .......... .......... 521 TGGTTGCACT TGTTATGTTC ATGTTGATCC AGAAAAGAGA GACAAGCCTG ATGCCAAGGC 74214 .......... .......... .......... .......... .......... .......... 521 TGTGAAGTGT TACTTCATAG GCTATGGTTC TCATTTGTTT GGTTACAGAT TTAGGGATGA 74154 .......... .......... .......... .......... .......... .......... 521 CAAGAACAGA TCCTGAGACA TTGTGACGTG ACATTTGATG AGTCTGTCAT GTACAAGGAC 74094 .......... .......... .......... .......... .......... .......... 521 AAAGAGCAGA AGATTCTAGA GATTACAAAT CAAGTGGCAG TTGAGGTTGA GTTGGAGAAG 74034 .......... .......... .......... .......... .......... .......... 521 AGAAACCCCA TAGATGTCGA AGCAAATACT CAACCAACTC CTACTGAAGA ATCTGGAGTG 73974 .......... .......... .......... .......... .......... .......... 521 GAGCAAGTTA CACCTGAGCA GGTGTTAAGG AGATCATCTA GATCCATGAG GGCACCAGAT 73914 .......... .......... .......... .......... .......... .......... 521 ACGTATTCAC CTTCATTACA CTATCTATTG TTGACTGATG AGAGAGAACC AGAGTCTTTT 73854 .......... .......... .......... .......... .......... .......... 521 GATGAGGCCC TACAGGTGGA GGATTCGATC AAGTGGGAGC AAGCCATGGA TGATGAGAGG 73794 .......... .......... .......... .......... .......... .......... 521 AGGTCACTTG AGAAGATCGA CACATGGGTG TTGACTAAGT TATCTGCAAG GAAGAGAGCT 73734 .......... .......... .......... .......... .......... .......... 521 TTGTTAAATA AGTGGGTGTT CAGAATCAAG AGTGAACCAG ATGGCAAAAG AAGGTTCAAG 73674 .......... .......... .......... .......... .......... .......... 521 GCTCGTTTAG TGGTTAAAGG ATATTCACAA AGGAAAGGTA TTGATTATGC TTAAATATTT 73614 .......... .......... .......... .......... .......... .......... 521 TCTTCTGTTG TGAAGTTAGC CTCTATTCGA ATTCTGTTGA GTGTTGTTGC ATCGGAGAAT 73554 .......... .......... .......... .......... .......... .......... 521 TTGCATCTAG AGCATATGGA TGTAAAAACA GTGTTTTTAT ATGGAGATAT GGACAAAGAG 73494 .......... .......... .......... .......... .......... .......... 521 ATCTATATGC AGCAACCGGA AGGATTTGTA GTTCCAGGCA AGGAACACAT GGTGTGCAAG 73434 .......... .......... .......... .......... .......... .......... 521 CTCACCAGGA GCTTGTATGG ACTAAAGCAA GCACCAAGGC AGTGGTACAA GAAGTTTAAC 73374 .......... .......... .......... .......... .......... .......... 521 TCCTTCATGA CCAAGGGTGG ATTCTGCAAA GCTGAAAAGG ATCCTTGTTG TTACTTCAAG 73314 .......... .......... .......... .......... .......... .......... 521 AAATACACTG ATTCATATGT CGTTCTACTC TTGTATATGG ATGATATGTT GATTGTAAGA 73254 .......... .......... .......... .......... .......... .......... 521 TCTAGTATGA GAGAGATTAA CAATCTGAAG ACAAGGTTGT CTACAGCATT TGAGATGACA 73194 .......... .......... .......... .......... .......... .......... 521 GATTTGGGTC CAGCAAAATA GATTTTGGGG ATGGAGATTT CTCGGGATAG ATCTGTTGGC 73134 .......... .......... .......... .......... .......... .......... 521 ACTTTAAATC TATCTCAGAA GTTGTACATT GAGAAGGTAC TGAGCAGATT CAGGGTTAAT 73074 .......... .......... .......... .......... .......... .......... 521 GATGCTAAAC CCAGGACTAC TCCATTGGCA AATCACTTTA AATTGTCAAA GGAGCAGTCA 73014 .......... .......... .......... .......... .......... .......... 521 CCCAAGACTT CCGAGGAGCG TGATCACATG GCACTTGTTC CATATGCTTC AGCAGTTGGT 72954 .......... .......... .......... .......... .......... .......... 521 AGTTTGATGT ATGTTATAGT CTGCACTAGA CCTGATATAC CACATGCATT GGGAGTTGTT 72894 .......... .......... .......... .......... .......... .......... 521 ACCAGGTACA TGGCGAACCC TGGGAAAGAG AATTGGGAAG GTGTGAAGTG GCTTCTGAGA 72834 .......... .......... .......... .......... .......... .......... 521 TATCTGAGAG GTACATCCAG TAGTTCACTT TGTTTTGGAA AAGGCGAGGT GACTCTACAG 72774 .......... .......... .......... .......... .......... .......... 521 GGTTTTGTGG ATGCTGATCT TGGTGGGGAT ATTGACTCGA GCAAGAGTAC ATCCGGGTAC 72714 .......... .......... .......... .......... .......... .......... 521 ATTTACACCA TAGGTGGAAC AGCAATGAGT TGGATGTCCA GGCTTCAGAA TTTGTATTTC 72654 .......... .......... .......... .......... .......... .......... 521 TCTTTCATCT ACTGAAGCTG AGTATGTGGC ATAGCTGAAG TTGGGAAAGA GATGATATGG 72594 .......... .......... .......... .......... .......... .......... 521 CTGGTAGATT ATCTTAAGGA ATTGGGCAAG AAGCAGAGCG AGAAGATTCT TTACTCAGAT 72534 .......... .......... .......... .......... .......... .......... 521 AGCCAGAGTG CCATGCAGTT GGTGAAAAAT CCAGTCTATC ATTCGAAGAC AAAGCACATC 72474 .......... .......... .......... .......... .......... .......... 521 AGAAGGCGAT ACCATTTCAC TCGCAGGGCA GTGGAGGATG GTGAAATGTG CTTGGAGAAG 72414 .......... .......... .......... .......... .......... .......... 521 ATAGAGGGTG CAAAGAACCC GGCAGACATG TTGATGAAAT GTGTTGATGT TAGGAAACTA 72354 .......... .......... .......... .......... .......... .......... 521 AGGTTATGTA AAACCTCGGT TGGTCTTCTG TAGTTGTTGC TACAGATGTT TCGGTGTGGT 72294 | || .......... .......... .......... ...TCTTT.. .......... .......... 526 AAAGATGTTG ATGATGAAGA GATTTTTTTT TGAGAATGTA TTTTTTGGAT GATTGAGTCA 72234 .......... .......... .......... .......... .......... .......... 526 GTCTCAAAGT GGGAGAATTG TAAGGTAGTG GAGCCTGATT AATGTTAGGA TTTCCTATTT 72174 .......... .......... .......... .......... .......... .......... 526 ATTCTCTATT TTAGGCTTTC CTATTTATTC TCTGTAACCA AAAATACTCT GATTTATTAA 72114 .......... .......... .......... .......... .......... .......... 526 TATAAATATA CCTCACCGCC TTAGAATTTT ACTTACGGGT TGTTACCATG AAATATTGGG 72054 .......... .......... .......... .......... .......... .......... 526 TTTTCTCTTT CTCTCTCTAG ATCTCTCATC TCTTTCTCTT GAAAGTTCTT GTGTTCTTCA 71994 .......... .......... .......... .......... .......... .......... 526 TTCATCTAGT GTGTGTGCGT GAATTCGATC CTAACAGTTT AGACTTTCCT TGAGAAGTGA 71934 | | | ||||| |||| ||||| .......... .......... .......... .......TCT CATCCTTCCT TGAGCAGTGA 549 CCATGCAAGC TTGTGTATCA CCTGGTTTCC TCACAATCAA TTGGCAGTTT TGG-----A- 71880 ||||||||| ||| || | |||||||||| |||||||||| || ||||||| ||| | TCATGCAAGC TTGATTAGGA CCTGGTTTCC TCACAATCAA TTTGCAGTTT TGGAAAACAG 609 -A---GCATC ACTAAAAATG AAATCAATGT TGCCTGTAAT GATAGAGTCA CGGAACAATT 71824 | ||||| || ||| | | ||||||||| |||||||||| | || | ||| || | |||| CACTTGCATC ACCAAACAAG AAATCAATGG TGCCTGTAAT GGTACAATCA CGATAAAATT 669 ATCTGTACGA GTGAGCGTAT AGGATGTATT GGAAACCATC GATTTTGTAG TTGTAGACAA 71764 ||| || |||||||||| | ||| || || ||||||| ||| ||| || ||||||| || GTCTTCCTGA GTGAGCGTAT AACGTGTCTT GGTAACCATC GATATTGCAG TTGTAGAGAA 729 TTGCTTTATC ATCATTAATC CTCAATGCAA CAACTTGTTC TTTTACTGGT CCTGCTCTGT 71704 || |||| ||||||| |||||||||| | ||||||| |||| ||| |||||| ||| CAGCCCTATC GGCATTAATT CTCAATGCAA CGGCTTGTTC TTTTGTGGGT CCTGCTGTGT 789 TTTCAATACC GATGTCCCTG ATAACGAACC TTTCACCAGA AACACCAAGG GAGGTTGTAT 71644 |||||||||| |||||| | |||||||| | |||||| | |||||||||| | || ||||| TTTCAATACC CATGTCCTTC ATAACGAAAC CATCACCACA AACACCAAGG GTGGCTGTAT 849 GCCATTTTAC TACACCGCCA CCATTCTTAC TCCCTTGTCA CCCAGTGACA GTGGCGGTAG 71584 ||||| || || || | | | | ||| | ||| |||| || GCCATGTTGA TATACGGTTA GGA-AC-TAC TGCCTGGTCA CCGG...... .......... 891 CCATAAATTT CACAAAGAGT GTCCAAAAAT TGTATAGGGG TATATTTTTT CTTTTGGATG 71524 .......... .......... .......... .......... .......... .......... 891 AATGAGTGCA CTAGAAATTT TAAAAATTAA AGTACGTAAT ATACATGAAA ATTTTTGGAA 71464 .......... .......... .......... .......... .......... .......... 891 AGAAAAGATG AAAAGATGAA TGAGTGGACT AGAAAATTTA AAAATTAAAC TATGTAGTAT 71404 .......... .......... .......... .......... .......... .......... 891 ACATGAAATT TGTGGGGGGG GGGGGGGATA CCAAATATAT ATGAATTTTT TTTTTAAAAA 71344 .......... .......... .......... .......... .......... .......... 891 AACGAGGAAA AGCTACTGCT AGGGAAATTT GAACTCACAA GCGCTTAAAT GTTTGGCTCT 71284 .......... .......... .......... .......... .......... .......... 891 TTCAAGACAA CTTAAACCAC TAGGCTGCAC CTTAAACCAC TAGGCTACAC CTTGTTGTGT 71224 .......... .......... .......... .......... .......... .......... 891 TAAGGGTGTC CAAAATAAAT TAGTTAACCA TTTTGTATAT TATTTTACTT GTATATACTA 71164 .......... .......... .......... .......... .......... .......... 891 TGTAATTTAC CGACGAAGGG TGTCCAATAG TATATAGCTA CGCCCCTGCC TAGTGATTAT 71104 ||||||| .......... .......... .......... .......... .......... ...TGATTAT 898 GGTCTTGGTT GGCCCTTCAC CAATAAACAC AACATTT-GC CTG-TCTTTT CAATTTCAAT 71046 |||||||||| || ||||||| |||||| ||| ||||||| || || |||||| | |||||||| GGTCTTGGTT GGGCCTTCAC CAATAAGCAC AACATTTAGC ATGTTCTTTT CGATTTCAAT 958 GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA GGAGTTGTAT AGTTCATGAG 70986 |||||||||| |||||||| | |||||||||| ||||| |||| ||||||| | | || || | GTGTTCCTTG TATGTACCCG CCTTGATCAG GATAACGAAA GGAGTTGGAC TGCTCCTGGG 1018 GACAGCGTTA AGTTC-TCCT GAAATGGTCT TGTATTGTCC GTCACCACTT GCAGAAACCA 70927 |||||| | | ||| | |||| | |||||||| |||||||||| | | ||||| |||||||||| GACAGCTTGA AGTGCTTCCT G-AATGGTCT TGTATTGTCC GCCTCCACTG GCAGAAACCA 1077 CAGCATTAGG CTTGGAGGGA GAAATTTGAA GGAGCTTATG GCTACTGGCT TCAACAAACC 70867 |||||||||| |||||||| | |||||||||| |||||||| | | |||||||| || ||||| CAGCATTAGG CTTGGAGGCA GAAATTTGAA GGAGCTTACG GTTACTGGCT TCGACAAATG 1137 AGTCACTATT TGATAACAAT TTGCGGGTAA GGCCAGTGGT TTTTGTGATC GTTTCACCGA 70807 ||||||| || |||||||||| |||||||||| |||| ||| | || ||||||| |||||||| AGTCACTGTT TGATAACAAT TTGCGGGTAA GGCCTGTGTT TTGTGTGATC ATTTCACCG- 1196 AAACTGTTGG CCATGGAAAG AGCATTGATA CTCAGCT--C -TTTCGTATT CAATATCTTC 70750 || |||||| |||||||||| ||||||| || ||||||| | | || | || || |||| AAGCTGTTGA CCATGGAAAG AGCATTGCTA CTCAGCTCCC GGGTGGTGCT CATTAGCTTC 1256 ATCATTTTGT TGTGGGTTGC ACTCTGTTCT GATTTGATAA AACCATCTGA GCAAGTCTCT 70690 ||||||| || ||||||| ||| | |||| |||||| | | |||||||| | ||||||||| ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA ACAAGTCTCT 1316 TCATAGGCAA TCACAGTGCT AAGCCATGTC TTGAGGTCTT CCACCACATC CTTGATCTTA 70630 ||||| |||| |||| ||| |||||||| | |||||||| | |||| | ||| ||| |||||| TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC CTTCATCTTA 1376 GAGAAATCAA AGTTCTCAAT CTTAGCGATA GAGCGTCTTT GGTGTAAGGA TCACTGGCAG 70570 |||||||||| |||||||||| | |||||| | |||| ||| | | GAGAAATCAA AGTTCTCAAT CCTAGCGACA GAGCCCCTTA GTT....... .......... 1419 CTTTCTTAAT CGGCTCGGTG TTTTTTGAGG TCATTCTTGA TGTCTGACAC AGGCTGGCAC 70510 .......... .......... .......... .......... .......... .......... 1419 CACAAGAACA GAAGCTATTC CACCGATTAC CACCTTCTTT GCAATTTTAT CAAATCACAT 70450 .......... .......... .......... .......... .......... .......... 1419 GTTAAGCCAA TCATAGTTTT GAAAAAGGCA TGAAGTTTTG ACCATTAGTT TTAAATGTGT 70390 .......... .......... .......... .......... .......... .......... 1419 GTGTTTTGGG AAAAAATAAT CATATGATAA TTTGTTACAG CCGTTTTCAA AACTAAAGGT 70330 .......... .......... .......... .......... .......... .......... 1419 CAAAAACTTC ATGCCTTCGA GAAAATTTTA TTTATTTTTG TAAAATAATA GTTGAGTTGT 70270 .......... .......... .......... .......... .......... .......... 1419 CACTTGATTT TTGGAAAATT AAGAAAACCA TTTAAAAAGA TAATTTTGAA ATTTTTTCAA 70210 .......... .......... .......... .......... .......... .......... 1419 TGAACTTAAT TTTAAGGGTT CAAGCGATCC TCTCAGAAAA GTTATATGTG GTTGACCAAC 70150 .......... .......... .......... .......... .......... .......... 1419 GAATTAAATA TGTCAATAAT GAAAATATTT AAGAATTATT CGTGAAAAGA ACTTATTTAA 70090 .......... .......... .......... .......... .......... .......... 1419 AAATGAACAG AAATTATTTG ATACATAAAC ATTCATACTA TTTCAAGAAA TGAAATAATT 70030 .......... .......... .......... .......... .......... .......... 1419 CTAATGTGGA AGTTTCAGAA ATAATTCTAG CTTAACAATT TATTCGAATC AAAATTTTCA 69970 .......... .......... .......... .......... .......... .......... 1419 AATAAGCGAG TAGCTCAAAC GCTTAAATAT GAATATGTAT TATTTGATAA CTATGAAAGA 69910 .......... .......... .......... .......... .......... .......... 1419 ATATGAAAAA TATTTTAACT TATCCTGACA AGCCTGGATT TGCCCAAAAG ACAAGTTAGT 69850 .......... .......... .......... .......... .......... .......... 1419 TCACTTAGCA TTTGTGAAAA AGATACATTT TTTTATTTAA GTCAATTGCA CAAACCTTGT 69790 .......... .......... .......... .......... .......... .......... 1419 ATTGTTTGTA ATCATGGAAG GATTTGACAT TTATCCCTAC CTTGTTAATA GAACTTCAAA 69730 .......... .......... .......... .......... .......... .......... 1419 ATATACATGA GAGGTGGGCT ACACCACGTC TCCCCGGTTA CATGTCAAAA GATATTTCTA 69670 .......... .......... .......... .......... .......... .......... 1419 AGACTTCGGT TGAACACTTC CTTAGAGAGA ACACTATTAA TTAAAGACAC TCTAATTAGT 69610 .......... .......... .......... .......... .......... .......... 1419 GAAATAAAGG TATCAATTCA AACTCTTAAT TTCTCGTTGA GGATTCAATA ACAAATCCAC 69550 .......... .......... .......... .......... .......... .......... 1419 TAAAATATCA TTAGGTAGTG TATGAGAAGG GTACAGTGTA TGCAGAACAT ATTACTATCT 69490 .......... .......... .......... .......... .......... .......... 1419 CAACGAGATA GAGAGACTTC TTCTGAAAGA CTCTCGATTC AAGTTTATCA AAACCAAGTA 69430 .......... .......... .......... .......... .......... .......... 1419 ATTATATAAG AAAATAACAA TGAAAAAAGC ATAGTCATTA ATTAATAAGA AAAACAGTGC 69370 .......... .......... .......... .......... .......... .......... 1419 AAAGTCTACA CGAAAAAAAC ACTAACAAGA GTAAAATATT GTAATCAAAC ACATTAACAA 69310 .......... .......... .......... .......... .......... .......... 1419 CATATGGCAG GAACTACAAG GGTACAACAA TTACTATGAC AGACAAACAA ACAAGCCTAA 69250 .......... .......... .......... .......... .......... .......... 1419 ACCTTCGCAA GGCAACACAC CCTCCATCCC TTCTATCCCT CTACCTTAAT CAAGGATCTA 69190 .......... .......... .......... .......... .......... .......... 1419 TACTCCTTCC TATCTAGAGT CGTGACCTCG ATAACATGAA GTTGTGTCAT ATATTGTATA 69130 .......... .......... .......... .......... .......... .......... 1419 ATCACCTTTT TCTCAATACT TCTTTGGCCT ACATATATCC TTTGTGAATC CCCAACAACT 69070 | | |||| || .......... .......... .......... .......... .........C CTCAACGGCT 1430 AGATTCTCAC TCCTCCTCAC 69050 ||| || || |||| |||| AGA-TCAAAC ACCTCTTCAC 1449 hqPGS_C01HBa0163B20.1-_SGN-U312517- (76976 76576,74693 74687,72320 72316,71956 71600,71110 70587,69080 69050) ******************************************************************************** EST sequence 11 -strand 924 n (File: SGN-U344810-) 1 CCCAGTGAAT GTAATTCGAC TCCTTATAGG GCGAAATNGG TACCGGGCCC CCCCCTTTTT 61 TTTTTTTTTT TTGGAGCCTG ATTAATATTT GATGTACTAT TTATTCTCTG TACCAAAAAA 121 TACTCTGATT TATCAATATA TATACCCCAC ACACCCCGTG AAAGTTTCCT CACGGGGTGT 181 TGCCACAAAA TATTGGTTTC TCTTTTTNCT CTCTAGATCT CTCATCTCTT TCTCTTGAAA 241 GTTTTTGTGT TCTTCATTCA TCAAGTTTGT GTGTGATTCG ATCCTAACAT CAAGTGTCAA 301 AACTCTCTTC ATGTAAGAAA GAAAAAAATG AAAACATGAA CTTCCCCAAT ATTTTAGCAC 361 AATTGGTAGA GGAAAGGCAC AAAACTACAC TGAGAAAATA ACAGGTGCAT GATTAGTGTA 421 CACTGTCGAT CGATCGATAA AAACACAAGT TAATCGTTTA AAGATCCTCT GGATGAATGC 481 CAAGAACCAT TGAGGCTATT GAACAGGCAA GTACCTGTCT CGTTGTTTGG CATTTGGAGA 541 TGTACTCTAG ATCTTAACTG TGATGTTCTG AGCTGTAAAA GTACTAACTC CGATCATCAG 601 TCAGATCAAC GTCCCTATTA CTTTGTAACG ATGTCTGGCT CAAATACCTA CTGTGAATCG 661 ACAAATACCT CCAATTCCAG TAAAGAATCA TATGTTTTCT TCTCGCGTGT GTCGAACACT 721 GTAATGCCTG TGATTTTCTG TACCCCATGC TTCACAGCAA TCAGATTCAA CTCTAATTCT 781 GAAGAGCTAA ATGCTTCCAC CTGTGCCAAA TGCATTGTTA GAAGACCATT AACCATGATA 841 GCCTTCTCAT CAAGTGAGTC ACCCTGCAGC CCGGGGGATC CACTAGTTCT AGAGCGGCCG 901 CCACCGCGGG GAGCTCCAGC TTTT Predicted gene structure (within gDNA segment 73723 to 64168): Exon 1 72153 71957 ( 197 n); cDNA 97 290 ( 194 n); score: 0.835 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.86), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 291 308 ( 18 n); score: 0.556 Intron 2 70331 65183 (5149 n); Pd: 0.735 (s: 0), Pa: 0.371 (s: 0) Exon 3 65182 65157 ( 26 n); cDNA 309 334 ( 26 n); score: 0.673 MATCH C01HBa0163B20.1- SGN-U344810- 0.835 241 0.261 C PGS_C01HBa0163B20.1-_SGN-U344810- (72153 71957,70349 70332,65182 65157) Alignment (genomic DNA sequence = upper lines): CTATTTATTC TCTGTAACCA AAAATACTCT GATTTATTAA TATAAATATA CCTCAC-CGC 72095 |||||||||| |||||| | | |||||||||| ||||||| || |||| ||| || ||| | | CTATTTATTC TCTGTACCAA AAAATACTCT GATTTATCAA TATATATACC CCACACACCC 156 CTTAGAATTT TACTTACGGG TTGTTACCAT GAAATATTGG GTTTTCTCTT TCTCTCTCTA 72035 | | || || | || ||||| |||| ||| ||||||||| || ||| || | ||||||| CGTGAAAGTT TCCTCACGGG GTGTTGCCAC AAAATATTGG TTTCTCT-TT TTNCTCTCTA 215 GATCTCTCAT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTC ATTCATCTAG TGTGTGTGCG 71975 |||||||||| |||||||||| |||||||| | |||||||||| ||||||| || | | |||| | GATCTCTCAT CTCTTTCTCT TGAAAGTTTT TGTGTTCTTC ATTCATCAAG T-T-TGTGTG 273 TGAATTCGAT CCTAACAGTT TAGACTTTCC TTGAGAAGTG ACCATGCAAG CTTGTGTATC 71915 || ||||||| ||||||| TG-ATTCGAT CCTAACAT.. .......... .......... .......... .......... 290 ACCTGGTTTC CTCACAATCA ATTGGCAGTT TTGGAAGCAT CACTAAAAAT GAAATCAATG 71855 .......... .......... .......... .......... .......... .......... 290 TTGCCTGTAA TGATAGAGTC ACGGAACAAT TATCTGTACG AGTGAGCGTA TAGGATGTAT 71795 .......... .......... .......... .......... .......... .......... 290 TGGAAACCAT CGATTTTGTA GTTGTAGACA ATTGCTTTAT CATCATTAAT CCTCAATGCA 71735 .......... .......... .......... .......... .......... .......... 290 ACAACTTGTT CTTTTACTGG TCCTGCTCTG TTTTCAATAC CGATGTCCCT GATAACGAAC 71675 .......... .......... .......... .......... .......... .......... 290 CTTTCACCAG AAACACCAAG GGAGGTTGTA TGCCATTTTA CTACACCGCC ACCATTCTTA 71615 .......... .......... .......... .......... .......... .......... 290 CTCCCTTGTC ACCCAGTGAC AGTGGCGGTA GCCATAAATT TCACAAAGAG TGTCCAAAAA 71555 .......... .......... .......... .......... .......... .......... 290 TTGTATAGGG GTATATTTTT TCTTTTGGAT GAATGAGTGC ACTAGAAATT TTAAAAATTA 71495 .......... .......... .......... .......... .......... .......... 290 AAGTACGTAA TATACATGAA AATTTTTGGA AAGAAAAGAT GAAAAGATGA ATGAGTGGAC 71435 .......... .......... .......... .......... .......... .......... 290 TAGAAAATTT AAAAATTAAA CTATGTAGTA TACATGAAAT TTGTGGGGGG GGGGGGGGAT 71375 .......... .......... .......... .......... .......... .......... 290 ACCAAATATA TATGAATTTT TTTTTTAAAA AAACGAGGAA AAGCTACTGC TAGGGAAATT 71315 .......... .......... .......... .......... .......... .......... 290 TGAACTCACA AGCGCTTAAA TGTTTGGCTC TTTCAAGACA ACTTAAACCA CTAGGCTGCA 71255 .......... .......... .......... .......... .......... .......... 290 CCTTAAACCA CTAGGCTACA CCTTGTTGTG TTAAGGGTGT CCAAAATAAA TTAGTTAACC 71195 .......... .......... .......... .......... .......... .......... 290 ATTTTGTATA TTATTTTACT TGTATATACT ATGTAATTTA CCGACGAAGG GTGTCCAATA 71135 .......... .......... .......... .......... .......... .......... 290 GTATATAGCT ACGCCCCTGC CTAGTGATTA TGGTCTTGGT TGGCCCTTCA CCAATAAACA 71075 .......... .......... .......... .......... .......... .......... 290 CAACATTTGC CTGTCTTTTC AATTTCAATG TGTTCCTTGT ATGTACCGGC CTTGATCAGG 71015 .......... .......... .......... .......... .......... .......... 290 ATAATGAAAG GAGTTGTATA GTTCATGAGG ACAGCGTTAA GTTCTCCTGA AATGGTCTTG 70955 .......... .......... .......... .......... .......... .......... 290 TATTGTCCGT CACCACTTGC AGAAACCACA GCATTAGGCT TGGAGGGAGA AATTTGAAGG 70895 .......... .......... .......... .......... .......... .......... 290 AGCTTATGGC TACTGGCTTC AACAAACCAG TCACTATTTG ATAACAATTT GCGGGTAAGG 70835 .......... .......... .......... .......... .......... .......... 290 CCAGTGGTTT TTGTGATCGT TTCACCGAAA ACTGTTGGCC ATGGAAAGAG CATTGATACT 70775 .......... .......... .......... .......... .......... .......... 290 CAGCTCTTTC GTATTCAATA TCTTCATCAT TTTGTTGTGG GTTGCACTCT GTTCTGATTT 70715 .......... .......... .......... .......... .......... .......... 290 GATAAAACCA TCTGAGCAAG TCTCTTCATA GGCAATCACA GTGCTAAGCC ATGTCTTGAG 70655 .......... .......... .......... .......... .......... .......... 290 GTCTTCCACC ACATCCTTGA TCTTAGAGAA ATCAAAGTTC TCAATCTTAG CGATAGAGCG 70595 .......... .......... .......... .......... .......... .......... 290 TCTTTGGTGT AAGGATCACT GGCAGCTTTC TTAATCGGCT CGGTGTTTTT TGAGGTCATT 70535 .......... .......... .......... .......... .......... .......... 290 CTTGATGTCT GACACAGGCT GGCACCACAA GAACAGAAGC TATTCCACCG ATTACCACCT 70475 .......... .......... .......... .......... .......... .......... 290 TCTTTGCAAT TTTATCAAAT CACATGTTAA GCCAATCATA GTTTTGAAAA AGGCATGAAG 70415 .......... .......... .......... .......... .......... .......... 290 TTTTGACCAT TAGTTTTAAA TGTGTGTGTT TTGGGAAAAA ATAATCATAT GATAATTTGT 70355 .......... .......... .......... .......... .......... .......... 290 TACAGCCGTT TTCAAAACTA AAGGTCAAAA ACTTCATGCC TTCGAGAAAA TTTTATTTAT 70295 | | |||||||| .....CAAGT GTCAAAACTC TCT....... .......... .......... .......... 308 TTTTGTAAAA TAATAGTTGA GTTGTCACTT GATTTTTGGA AAATTAAGAA AACCATTTAA 70235 .......... .......... .......... .......... .......... .......... 308 AAAGATAATT TTGAAATTTT TTCAATGAAC TTAATTTTAA GGGTTCAAGC GATCCTCTCA 70175 .......... .......... .......... .......... .......... .......... 308 GAAAAGTTAT ATGTGGTTGA CCAACGAATT AAATATGTCA ATAATGAAAA TATTTAAGAA 70115 .......... .......... .......... .......... .......... .......... 308 TTATTCGTGA AAAGAACTTA TTTAAAAATG AACAGAAATT ATTTGATACA TAAACATTCA 70055 .......... .......... .......... .......... .......... .......... 308 TACTATTTCA AGAAATGAAA TAATTCTAAT GTGGAAGTTT CAGAAATAAT TCTAGCTTAA 69995 .......... .......... .......... .......... .......... .......... 308 CAATTTATTC GAATCAAAAT TTTCAAATAA GCGAGTAGCT CAAACGCTTA AATATGAATA 69935 .......... .......... .......... .......... .......... .......... 308 TGTATTATTT GATAACTATG AAAGAATATG AAAAATATTT TAACTTATCC TGACAAGCCT 69875 .......... .......... .......... .......... .......... .......... 308 GGATTTGCCC AAAAGACAAG TTAGTTCACT TAGCATTTGT GAAAAAGATA CATTTTTTTA 69815 .......... .......... .......... .......... .......... .......... 308 TTTAAGTCAA TTGCACAAAC CTTGTATTGT TTGTAATCAT GGAAGGATTT GACATTTATC 69755 .......... .......... .......... .......... .......... .......... 308 CCTACCTTGT TAATAGAACT TCAAAATATA CATGAGAGGT GGGCTACACC ACGTCTCCCC 69695 .......... .......... .......... .......... .......... .......... 308 GGTTACATGT CAAAAGATAT TTCTAAGACT TCGGTTGAAC ACTTCCTTAG AGAGAACACT 69635 .......... .......... .......... .......... .......... .......... 308 ATTAATTAAA GACACTCTAA TTAGTGAAAT AAAGGTATCA ATTCAAACTC TTAATTTCTC 69575 .......... .......... .......... .......... .......... .......... 308 GTTGAGGATT CAATAACAAA TCCACTAAAA TATCATTAGG TAGTGTATGA GAAGGGTACA 69515 .......... .......... .......... .......... .......... .......... 308 GTGTATGCAG AACATATTAC TATCTCAACG AGATAGAGAG ACTTCTTCTG AAAGACTCTC 69455 .......... .......... .......... .......... .......... .......... 308 GATTCAAGTT TATCAAAACC AAGTAATTAT ATAAGAAAAT AACAATGAAA AAAGCATAGT 69395 .......... .......... .......... .......... .......... .......... 308 CATTAATTAA TAAGAAAAAC AGTGCAAAGT CTACACGAAA AAAACACTAA CAAGAGTAAA 69335 .......... .......... .......... .......... .......... .......... 308 ATATTGTAAT CAAACACATT AACAACATAT GGCAGGAACT ACAAGGGTAC AACAATTACT 69275 .......... .......... .......... .......... .......... .......... 308 ATGACAGACA AACAAACAAG CCTAAACCTT CGCAAGGCAA CACACCCTCC ATCCCTTCTA 69215 .......... .......... .......... .......... .......... .......... 308 TCCCTCTACC TTAATCAAGG ATCTATACTC CTTCCTATCT AGAGTCGTGA CCTCGATAAC 69155 .......... .......... .......... .......... .......... .......... 308 ATGAAGTTGT GTCATATATT GTATAATCAC CTTTTTCTCA ATACTTCTTT GGCCTACATA 69095 .......... .......... .......... .......... .......... .......... 308 TATCCTTTGT GAATCCCCAA CAACTAGATT CTCACTCCTC CTCACTGTGG CACCAGCGCA 69035 .......... .......... .......... .......... .......... .......... 308 CCTCTTATGC ACATGTCTAA ACCATCTTAG TCTCGCTTCC CACATCTTGT TCTTCACATA 68975 .......... .......... .......... .......... .......... .......... 308 GGTAACTCTC CTCTTCTCCC AGATAACCTC ATTCTTAATC TTATCGCTTC TAGTATGCTC 68915 .......... .......... .......... .......... .......... .......... 308 ACACATTTAT CTCAACATAT GCATCTACGA AACATGCATC TTTTGTACAT ATGAGTGCTT 68855 .......... .......... .......... .......... .......... .......... 308 GACTGGCCAA CACTCCAACC TACATAACAA GAACACTCTA AACACCAATT TGTAGAACTT 68795 .......... .......... .......... .......... .......... .......... 308 ACCTTTAAGT CTAGGTGGTA CCTTCTTATC ATACTAAACT CTAGAGGCAA GCCTCTATTT 68735 .......... .......... .......... .......... .......... .......... 308 CATCCATGTT GCTCTAGTGG GATGTGTGAC ATCATCATTG ATGTGCTCGT TACCCTGTAT 68675 .......... .......... .......... .......... .......... .......... 308 TATGAGCCCA AGATACTTAA AACTTTCTGT CTTAGAAATA GTTTAAGTGG CAAGCCTTAC 68615 .......... .......... .......... .......... .......... .......... 308 TTCCACGTTC ACTTCATATG ACACGCTATT GAATTTGCAC TCCAAATATT CTATTTTGTT 68555 .......... .......... .......... .......... .......... .......... 308 CATGCTCAAC ATGGACCCTT CGAACTCTAT AGTCTCTTTC CAAATCTCCA ACATAGCATT 68495 .......... .......... .......... .......... .......... .......... 308 AACTCAATTT GGTGTCTAAT CAATCAGTAT TATGTCTTCT GCAAATAATA TACACAGAGG 68435 .......... .......... .......... .......... .......... .......... 308 AACCTCTTCC TGAATAGAGC ACATCAGTTC ATCTATCACC AAGACAAATA GGAAAGCACT 68375 .......... .......... .......... .......... .......... .......... 308 AAGAATTGAT CCCTTAATTG AAGTGTAGCC TCATCGTAAC TGGTAAGTGC TCTGAGTCTT 68315 .......... .......... .......... .......... .......... .......... 308 TTCCGATTGT TTTATGATGA CCCAGACCGT CGTTATTGGC ACCTACACTA CAACTTGGTG 68255 .......... .......... .......... .......... .......... .......... 308 GGAGAACCAC TACTAGTTAT CAACTAAAGC AATAAACCTA CAAACTAAGG TATTAACGTT 68195 .......... .......... .......... .......... .......... .......... 308 ACGGAAGCAA GTTAAATAAC TAAAGACAAT GTTCCATTTC TAAACAATGG TATAACAACT 68135 .......... .......... .......... .......... .......... .......... 308 AACTAATAAT GTGGAAGATA AACCTAGAAC CTGAAAGTCA ATGTACTAAA ATTAGAAATA 68075 .......... .......... .......... .......... .......... .......... 308 AGAACCAAAT CTAACAATAA TTTCTTGTGA ACTATCTAAC TAACTAAAAC AAGGTCTACG 68015 .......... .......... .......... .......... .......... .......... 308 TCCAAAAATG ATGGACATAG ACTAAAGAAA ATTTTATGGC AATTCGAACG ATGTGTCTCA 67955 .......... .......... .......... .......... .......... .......... 308 CCCTTGAACT CGAAGTGATC ATCGATCTCC TAAGAGAGGT CTATCAACAG TCGTGCAAGA 67895 .......... .......... .......... .......... .......... .......... 308 TGCGCTGTAC TCAACAAAAA TATGATCAAG TGCAGAATCG GTACACAACC ACGGTGTAGT 67835 .......... .......... .......... .......... .......... .......... 308 GGTAAGTCAC GTGGCTATCC CACTAGTGTA ACATAAACAA GCAATTACAG GATTATAAAA 67775 .......... .......... .......... .......... .......... .......... 308 CATGCATAAA TATCAACATA TTCAATACTA TCACAAGAAC AATATCACAG TTCACATGTT 67715 .......... .......... .......... .......... .......... .......... 308 ATATCATGTA GTTGGTCCTC TCACGGAACC CAAAATCAAA TTGTTAGCAT GCCGGAATGT 67655 .......... .......... .......... .......... .......... .......... 308 GGCTATCAAA TCCATTTTAT GGAAAACATG AAAATCGATC CCAATTAGCA TGTCGAAATG 67595 .......... .......... .......... .......... .......... .......... 308 TGAAAATCCG ATTCAAGTTA GAGTGTCGTA ACGTGGCAGC TGATCCCAAT CACATATTAC 67535 .......... .......... .......... .......... .......... .......... 308 AATAACACAT CAAGATCACA CGTTCAAGTC ATAATTTCAT TGTGTCAATA TTCATATTTC 67475 .......... .......... .......... .......... .......... .......... 308 TCATTTCAAC ATCTATGATC AATATTGTGT TATGTATACA CATACAAGTA TCATAACGAA 67415 .......... .......... .......... .......... .......... .......... 308 GCAAAGCAAA TGTATATCAT ACAATAATAG AATCAAAACC ATCACCAACC TTAAAACAAG 67355 .......... .......... .......... .......... .......... .......... 308 CTTGAAACCC TAGACAGATT GATCCATTCC TTTCCAGATT CGTTCTGCTT GTTCGTGGTT 67295 .......... .......... .......... .......... .......... .......... 308 TATAAATAAC AATTCATGTA CAGGATTCAA TAAAGAAACA CTCAATTCCA AATGTTAACG 67235 .......... .......... .......... .......... .......... .......... 308 AACTATGAAC CTTAGTTCAA AACCCATGAC CCCAAGTAGT CAATTTATGG TTAATTCCAC 67175 .......... .......... .......... .......... .......... .......... 308 CATAAGACTC TTCAAGAAAT CCTTCCTCAT TAATATTGAC CCATTCTAAA AGTATATACG 67115 .......... .......... .......... .......... .......... .......... 308 GATCAAAAAC TAATTCAGGA AGTAAAAACT TACATCTAGT TTCAAGAATG GTGGAAAATG 67055 .......... .......... .......... .......... .......... .......... 308 AGTTGGAATA GCTCAAGGGT CGTCTCATTA CTCAAAAAGT CAAAAAGTAC AAAATAAAGT 66995 .......... .......... .......... .......... .......... .......... 308 CGTCTAAGGG TTTTATTTAT GATTTTAAAA TCCTCCATCC TGCTCCAGCA ACACCCATCC 66935 .......... .......... .......... .......... .......... .......... 308 TGTTGTAGCG GCGTCGCTGC AGTGGCAGTA ATCCTGCTGA GCGGCACAAA TTAGACCAGT 66875 .......... .......... .......... .......... .......... .......... 308 GAGCTTTTTA AAAAAACTAA AAAAATTACG TATATACATT CTCGTCTGTT CCGCTACAAG 66815 .......... .......... .......... .......... .......... .......... 308 GGTACCCATC CTGTTGTAGC GGCATCGATG TAGTGACACA AAACGAGATA GTGAGCTCCT 66755 .......... .......... .......... .......... .......... .......... 308 TAAGGGTATT TCACTTCTCC CTTTTTACAA TACCCTCTTC ACCCACTATG CTGAGAAAAT 66695 .......... .......... .......... .......... .......... .......... 308 GCTCTTAACG TCAAAATCAA TTCCAAATGA TCTACTTATC CAAATTCGAT TTTGTAAAGT 66635 .......... .......... .......... .......... .......... .......... 308 TGTACGAATT CCTTTACAAT TTATCTATCC AATTATGTAA TCAAAACTAC ATTTACTCCA 66575 .......... .......... .......... .......... .......... .......... 308 TCCGATTGCT ACCGGATTTT TCTACGCCTT GATGACTCTA ATTTTCTCCA AATCTGGACA 66515 .......... .......... .......... .......... .......... .......... 308 AGGTTGGAAA TATCCTAGTC ATATGAAAAG TTTTTCTGAC CCCAATTTTC CCCATTGGCA 66455 .......... .......... .......... .......... .......... .......... 308 TTTCTAGAAG ACGAAACCGG TTGTTACAGT AGATACCAAT TTATCAATCA GTCGTCCTCG 66395 .......... .......... .......... .......... .......... .......... 308 GGTGATCAAC TAAGGAAAAG TAGTCTAGAG AAGGAACAAG GTAGTACCTG ATTCGACGAA 66335 .......... .......... .......... .......... .......... .......... 308 CAATTGTGGA TACTAGTCTC GCATATCCTT TTCAGTCTCC CAAATAGATT CCTCAACTGG 66275 .......... .......... .......... .......... .......... .......... 308 ACGATGCTTC CATTGACCTT TTACAAACTT AATCACTTTG TTCCTCAACT TTCGAACATC 66215 .......... .......... .......... .......... .......... .......... 308 ACGATCAAGA ATAGCAATCG GTTCCTCCTC ATATTGGAGG TCCTTGCATA ACACTATTGA 66155 .......... .......... .......... .......... .......... .......... 308 GTCCCACTTA ATGATATACT CTCCATCACC GTGATAGCTC TTCAACATAG ACACATCAAA 66095 .......... .......... .......... .......... .......... .......... 308 TAAAGAATGT ACATCGGACA AGTTTGTAGG TAGCGTCAAT CTATACGCCA CCGTTCCTAC 66035 .......... .......... .......... .......... .......... .......... 308 ACGTTCAAGA ATCTAAAAGG GATCAATATA CCGAGGACTC AACTTACCCC TCTAGACAAG 65975 .......... .......... .......... .......... .......... .......... 308 TCTCATCACC CCTTTCATGG TTATACCTTG AGAAGAACAT TCTCGCCGGT CTGGAATTCC 65915 .......... .......... .......... .......... .......... .......... 308 ATGTCTCTCA CTTTGTGATC CGCATACTTC TTTTATCTAC TCTACGAGGT TAGAAATTTA 65855 .......... .......... .......... .......... .......... .......... 308 GCTCGAATGC TCCTCACCTT ATCTTGAGCG TCGTTCACTA AGTCAATCCC CCAAAGGTTT 65795 .......... .......... .......... .......... .......... .......... 308 TACATCTCCG GATTCAAACC AACATATGGG TTATCTACAT CCTGTCCCAT ATAACGCTTC 65735 .......... .......... .......... .......... .......... .......... 308 AAATGATGTG ATATCAATGC TCGAGTGATA ACTATTATTA TAAGAGAACT CACATAATGG 65675 .......... .......... .......... .......... .......... .......... 308 TAGGAACTTA TCCCAATACC CTCCAAAGTC AATTACTCAA CACGTTTTCA AAACACTTGT 65615 .......... .......... .......... .......... .......... .......... 308 ATAGTCCTTT CTAATTGTCC ATCCGTCTGG ATATGGAAGG TTGTACTAAA TGTGAGCTGC 65555 .......... .......... .......... .......... .......... .......... 308 TTGACCAATT TAACATGCAA CTTCCTCCAA AACTTAGAAG TGAAAAGGGT TCCACGATAT 65495 .......... .......... .......... .......... .......... .......... 308 GAGATGATGG AAAGGGGCAC ACCATGCAAC TTTAGTATCT CCTTTACATA AATCTTAGTC 65435 .......... .......... .......... .......... .......... .......... 308 AATTGTTCAG CATTCTAATC CACTCTGACC GAGATAACGT GGACTGGTTG TAGTAAACCT 65375 .......... .......... .......... .......... .......... .......... 308 TTCAACCACT ACCCAAACAG AATCAAATTT CCCAAAAGTC TTGAGGCTAA CCACTAAGTA 65315 .......... .......... .......... .......... .......... .......... 308 CTGCTTATAT ATATATATAT ATATATAAAA AATCCTCTCT TGCCTCTTGC TACTATTTTG 65255 .......... .......... .......... .......... .......... .......... 308 CTGCGTCTTA GTTATCTTGG AATTTTATTG ATAACTTACT AGTTGTCTTT GTTATTGTTG 65195 .......... .......... .......... .......... .......... .......... 308 ATTAGTTTTA AGTTATAGGA TGAACG-AGA AAATGAAAA 65157 | || | | ||| | | | ||||||||| .......... ..TCAT-GTA AGAAAGAAAA AAATGAAAA 334 hqPGS_C01HBa0163B20.1-_SGN-U344810- (72153 71957) ******************************************************************************** EST sequence 34 -strand 218 n (File: SGN-U340801-) 1 GGATGCTGAT CTTGGTGGGG ATGTTGACTC GAGCAAGAGT ACGTCCGGGT ACATTTACAC 61 CATAGGTGGA AAAGCAGTAA GTTGGATGTC CGTGTCTTTA GAAGTATGTT TCTCTTTCAT 121 CCACTAAAGC TGAGTTTGTG GCAATAGCTG AAGCTGGGAA AGAGATGATA TGGATGGCAG 181 ATTATCTTGA GGAATTGGGC AAGAAGCAAA GCAGAATT Predicted gene structure (within gDNA segment 73375 to 71859): Exon 1 72765 72555 ( 211 n); cDNA 1 212 ( 212 n); score: 0.882 MATCH C01HBa0163B20.1- SGN-U340801- 0.882 211 0.968 C PGS_C01HBa0163B20.1-_SGN-U340801- (72765 72555) Alignment (genomic DNA sequence = upper lines): GGATGCTGAT CTTGGTGGGG ATATTGACTC GAGCAAGAGT ACATCCGGGT ACATTTACAC 72706 |||||||||| |||||||||| || ||||||| |||||||||| || ||||||| |||||||||| GGATGCTGAT CTTGGTGGGG ATGTTGACTC GAGCAAGAGT ACGTCCGGGT ACATTTACAC 60 CATAGGTGGA ACAGCAATGA GTTGGATGTC C-AGGCTTCA GAATTTGTAT TTCTCTTTCA 72647 |||||||||| | |||| | | |||||||||| | | ||| | ||| | | | |||||||||| CATAGGTGGA AAAGCAGTAA GTTGGATGTC CGTGTCTTTA GAA-GTATGT TTCTCTTTCA 119 TCTACTGAAG CTGAGTATGT GGCA-TAGCT GAAGTTGGGA AAGAGATGAT ATGGCTGGTA 72588 || ||| ||| |||||| ||| |||| ||||| |||| ||||| |||||||||| |||| ||| | TCCACTAAAG CTGAGTTTGT GGCAATAGCT GAAGCTGGGA AAGAGATGAT ATGGATGGCA 179 GATTATCTTA AGGAATTGGG CAAGAAGCAG AGC 72555 ||||||||| |||||||||| ||||||||| ||| GATTATCTTG AGGAATTGGG CAAGAAGCAA AGC 212 hqPGS_C01HBa0163B20.1-_SGN-U340801- (72765 72555) ******************************************************************************** EST sequence 45 -strand 1191 n (File: SGN-U317281-) 1 TTTTTTTTTT TTTTTTTTCA ACATCATAAA ACGTATAGTA TCATAAAAAT TGAGAATGAT 61 TTAGTGTTTT GGTTTACACA CACACTACAA TAGCAAAACA AAACAGTTCA ATTTGCTTCG 121 ATTAAGTTGA AGGTACACTG CATGGTAAGC ATGGATGGAC ATTATAATAT TTGCCAACTC 181 TAGGAGCATT TTTCAAAGAC ATGTTTCACT TCATGTATTT ATGAAGAAAC TTTCTGTGAA 241 AGTCATTCCG GATAGTGTCA TTGATGAAGC GCTTAGCTGC CTTCATTTCA CCTCGAGCTT 301 GGTTCTTGAA AACTACATCA TCATCCCACC TTCGCTTCAC ACTGAAAGTT GTTGGCTGGT 361 TGTTGTTTAA CAGAGGGTTT CCTCTCAATA ATTCCGCCTC CTTTGCTTTA AGCTCTTCCT 421 CTTGCTCTAG CCTTTCTTTC CGAAGTTTTT CCTCTGCTTT TTCTTTCTTT ATCTGTTCAA 481 GCTCTGCCAA GAGAGCTTCT GTATCATCTT CATCATCGTC ATCATCATCG TCGTCATCAC 541 TCTCATCACC ACTCTTAACA TCCACATCGG CATCATCAGC ATCAGCACTC CGCGGAACAA 601 TACGATCTTC AATCTCTCGT TTAGCCCCTT CCACAAAGAG TTGACTACCT TTTCGACGAT 661 CTCTGTCATC ATTATAACTC TTGTCTTTAG AGAAATGCCT CCGCTCACGG TCCTCCAACT 721 CATCCCGGAG GTTCCTCTTC TGCAACTCAT CCTGGGTGTC TTGTCCTTCC TTTCTGGGCT 781 TTAATGTTGT GTGAGCTGCA ATGTCTCTTG AAGAGTATTT TTGAGATGGA CCAAATATCC 841 GGGTTCCACC TTGTTCATTG CCACCTTTAG CAGGTGCCCA CGTAGGTCTA GCTGCCGTTG 901 TCATATCTTC TGGGTCTCAA GACAAAATCT AATCTCAGAC GCAGAGCGAT GGGAGAATCG 961 GAAAAATTGA AACTTCGACC CGAAAAAGTG AAAGAGCAAT CTTGAATCAC TTGGATATCA 1021 TTTATATTTT TCATTGATTT TATTTCTAAA TATTCATAAC ATTAGATCTT TAAATTAAAT 1081 CTCAACATTT TCATGAAATA ATTAATTATC TATTTTAATT AAAATTCTAA ATTAAATCTC 1141 AATATTTTCA TCAAGGAAAT AGTTTCTATT TCAATTAGAA TTCGGCCGAT T Predicted gene structure (within gDNA segment 71532 to 83830): Exon 1 73913 73939 ( 27 n); cDNA 868 894 ( 27 n); score: 0.741 Intron 1 73940 74570 ( 631 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0) Exon 2 74571 74587 ( 17 n); cDNA 895 912 ( 18 n); score: 0.618 Intron 2 74588 79313 (4726 n); Pd: 0.912 (s: 0), Pa: 0.917 (s: 0.53) Exon 3 79314 79356 ( 43 n); cDNA 913 952 ( 40 n); score: 0.535 Intron 3 79357 79748 ( 392 n); Pd: 0.224 (s: 0.53), Pa: 0.188 (s: 0) Exon 4 79749 79784 ( 36 n); cDNA 953 987 ( 35 n); score: 0.611 Intron 4 79785 80353 ( 569 n); Pd: 0.451 (s: 0), Pa: 0.937 (s: 0) Exon 5 80354 80366 ( 13 n); cDNA 988 999 ( 12 n); score: 0.538 Intron 5 80367 82131 (1765 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.91) Exon 6 82132 82313 ( 182 n); cDNA 1000 1182 ( 183 n); score: 0.857 PPA cDNA 18 1 MATCH C01HBa0163B20.1+ SGN-U317281- 0.857 318 0.267 C PGS_C01HBa0163B20.1+_SGN-U317281- (73913 73939,74571 74587,79314 79356,79749 79784,80354 80366,82132 82313) Alignment (genomic DNA sequence = upper lines): TATCTGGTGC CCTCATGGAT CTAGATGATC TCCTTAACAC CTGCTCAGGT GTAACTTGCT 73972 || | ||||| || | | | | |||| || TAGCAGGTGC CCACGTAGGT CTAGCTG... .......... .......... .......... 894 CCACTCCAGA TTCTTCAGTA GGAGTTGGTT GAGTATTTGC TTCGACATCT ATGGGGTTTC 74032 .......... .......... .......... .......... .......... .......... 894 TCTTCTCCAA CTCAACCTCA ACTGCCACTT GATTTGTAAT CTCTAGAATC TTCTGCTCTT 74092 .......... .......... .......... .......... .......... .......... 894 TGTCCTTGTA CATGACAGAC TCATCAAATG TCACGTCACA ATGTCTCAGG ATCTGTTCTT 74152 .......... .......... .......... .......... .......... .......... 894 GTCATCCCTA AATCTGTAAC CAAACAAATG AGAACCATAG CCTATGAAGT AACACTTCAC 74212 .......... .......... .......... .......... .......... .......... 894 AGCCTTGGCA TCAGGCTTGT CTCTCTTTTC TGGATCAACA TGAACATAAC AAGTGCAACC 74272 .......... .......... .......... .......... .......... .......... 894 AAAAGTCCTC AAGTGTGAGT ACTTAAGTTC TTTTCCTGTC CACACCTCCT CTGGAATCTT 74332 .......... .......... .......... .......... .......... .......... 894 GAACCCTAAA GGAACTGATG GTCCCCTATT GATCAAGTAT GCAACTTTGC TCACAACATC 74392 .......... .......... .......... .......... .......... .......... 894 CGCCCAAAGT GTTTTGGGCA GCCCACAGTG TATCCTCATA CTCCTTTCAA GCTCATTCAA 74452 .......... .......... .......... .......... .......... .......... 894 TGTTCTGTTC ATCCTCTCAA CAATTCTATT CTGCCTTGCC TCACCAGGAA CTGTTCTCAT 74512 .......... .......... .......... .......... .......... .......... 894 CAATCTGATT CCGTCAACTG CACAGAATGC CTTGAACTCT GATTTGTCAT ACTCTCCTCC 74572 || .......... .......... .......... .......... .......... ........CC 896 ATTGTCAGAC CTT-AGGCAT TTGACTTTCA AACCGATCTG ATTCTCAACT TCAGCTTTCC 74631 |||||| | ||| | GTTGTCATAT CTTCTG.... .......... .......... .......... .......... 912 ACTTCTTGAA AGTTGCAAAC ACATCTAACT TATGCTTCAA GAAGTAAACC GATACCTTCC 74691 .......... .......... .......... .......... .......... .......... 912 TGCTGAAATC ATCAATGAAG GTAACATAGA ATCTGGATCC TCCAAGTAAT GATACTGGAT 74751 .......... .......... .......... .......... .......... .......... 912 ATGGTCCCCA AACATCTATA TGGACCATTT CCAACCGCAC TTTCTTTGGC TCTCTAGGAG 74811 .......... .......... .......... .......... .......... .......... 912 TCCTTGTGAA GCTTACTCTT TTCTGTTTTC CCATAACACA GCTCTCGCAA AGACCCATAT 74871 .......... .......... .......... .......... .......... .......... 912 CAACAGACTT CAGACCCTCT AATTCTCCTT TTGCAACCAA CATCTTCATT CCTTTAGTAC 74931 .......... .......... .......... .......... .......... .......... 912 TCATGTGTCC AAGTCTGTTG TGCCACAGAC ATGAACCGGA AACACCTTCA GCAACAGCGA 74991 .......... .......... .......... .......... .......... .......... 912 CCTAGTTTAT ACACTCTGCA GTGGTGTACA AGGTTCCAGA TTTGGTGCCA CGAGCTACTA 75051 .......... .......... .......... .......... .......... .......... 912 CCATAGCAAC TTTCATGATC TTCCACGAAC ATTTCCCTAA CTCTGCTGCA TATCCCGTGC 75111 .......... .......... .......... .......... .......... .......... 912 TATCCAACTG ACCGACAGAG ATCAATTTTT TGTTGATCCC AGGAATATAT CTGACATCCT 75171 .......... .......... .......... .......... .......... .......... 912 CCAATGTCCA TTGGTTTCCC GAGGTGGTCT TTATGCAAAC ATCCCCCTTT CCTTCAATCT 75231 .......... .......... .......... .......... .......... .......... 912 CTAAGGCTTT ATTGTCAACA AGATATACTT TTCCAAAATT TCCAGATTTG AAATTTTGGA 75291 .......... .......... .......... .......... .......... .......... 912 ACAACTCCTT GCTTGAAGAT GAATGGAAAG ATGCACCAGA ATCCAAAATC CATGATTCAA 75351 .......... .......... .......... .......... .......... .......... 912 CCGGGCTATT CACACTAAGG ATTAGAGCAT CCCCAATGTC CTCTGATGAA TTTACAGAAT 75411 .......... .......... .......... .......... .......... .......... 912 CATTGTCATC TCCAAATTTT GTGATTTTGT TTCTTCTTTT GCTTTGTATA GTTCGTCTAA 75471 .......... .......... .......... .......... .......... .......... 912 AAGTGCCCTT TTTCTTTACA GTTCCAACAA GTCACGTTTG ATCTTCAGGG ATTTTTCTCG 75531 .......... .......... .......... .......... .......... .......... 912 ATTCTTTGAT TTTGATCGAC CATGTTGATT TTGGCCTTTC GTCTTACTTC TCCCCCTTCG 75591 .......... .......... .......... .......... .......... .......... 912 ATCAACGCTG AGAGCACTGC CCAATGAATT TCCCACTTCT CATTTGTGAA TACTTTCGCT 75651 .......... .......... .......... .......... .......... .......... 912 AAGAACAACA TCATGGATTT TATCAAACTT CAGTTTCTCA GATCCACGGG AACTGCGAAT 75711 .......... .......... .......... .......... .......... .......... 912 CGCAGCAACA ATAGTATCCC AAGACTCGGG CAGAGATGAC AACAAAATCA ACGCCTTAAT 75771 .......... .......... .......... .......... .......... .......... 912 TTCATCTTCG AAATTGATAT CCACAGAATT GAGTTGACTC ACAATCATAT TAAACTCGTT 75831 .......... .......... .......... .......... .......... .......... 912 TATATGATCA GAAACAGATC CATTCTCATA CATCTGTAAA TTGAACAATC TACGCATCAA 75891 .......... .......... .......... .......... .......... .......... 912 ATATACCTTG TTCATAGCCG ATGGTTTTTC ATACATGTTT GACAGTTCCT TCAACAGACC 75951 .......... .......... .......... .......... .......... .......... 912 GAACGTCTTC ACAATGTTGA ACGCCACGTT TCTTGACAAA GTCAACCGGA TCAACCCTAG 76011 .......... .......... .......... .......... .......... .......... 912 AGCCTGGCGA TCCTTGAGTT TCCACTTCTC CTCCGTCATG GATTCCGGTT TCACCCTGGT 76071 .......... .......... .......... .......... .......... .......... 912 CAACGGTTTA TGAAGATCTT TCTGGTACAG ATAATCTTTG ATCTGCATCT TCCAGAAACT 76131 .......... .......... .......... .......... .......... .......... 912 AAAATCGGAT CCATCAAACT TCTCGATTCC AAGCTTCAAA CTATCCATCT TCAGTGATCG 76191 .......... .......... .......... .......... .......... .......... 912 TGTTGTATCT CCTTATCTCT GATGCCAGTT GTTAGGATCG AATTAAAGCA CACACACTAG 76251 .......... .......... .......... .......... .......... .......... 912 ATGAATGAAA ACACAAGAAC TTTTAAAAGA AAGAGATGAG AGATCTAGAA AGAGAAAACC 76311 .......... .......... .......... .......... .......... .......... 912 CAATATTTTG TGGTAACACC CCGTGAGTAA ACTTCCACGG TCGTGAGGTA TATTTATATT 76371 .......... .......... .......... .......... .......... .......... 912 AATAAATCAG AGTTTTTTTG GTTACAGAGA ATAAATAGAG AATAAATAGG AAAGCCTAAA 76431 .......... .......... .......... .......... .......... .......... 912 ATTTAGGTCG GGTCGCTGCC CTGAACCCCT CCTTCGGATG GGGGGCTCCC ACCCCCATAA 76491 .......... .......... .......... .......... .......... .......... 912 CCCCCGGTAA CCTCACCGCG GAAATTGCGT AAAGAGTTAT ATATATTAAT CAGGCTCCAC 76551 .......... .......... .......... .......... .......... .......... 912 TACTTAACAT AAACAAGATA GTACCTCTGG ATTAGTTATC CAGAATTGTG ACATCAAGCC 76611 .......... .......... .......... .......... .......... .......... 912 TCAGGCAGGG TTCCCTAGCA CCATTAAAAG CCTATATTGG ACGTCCATGG AAGGAGTATT 76671 .......... .......... .......... .......... .......... .......... 912 CCAAGACCAT CATAATGCAA TCAAACATTG ATGCATTCAT CGATCCATCA GGATGGTCAC 76731 .......... .......... .......... .......... .......... .......... 912 CATGGAACAC AACTAATTTT GGAAAACACA CATGTTTTAT GCAGAGTATC AGAACAGAGA 76791 .......... .......... .......... .......... .......... .......... 912 ACCAGGTGCT GCACTTGACA AAAAAATCTC AACATGGAGA GGTTACCAAA AGGGAATTTC 76851 .......... .......... .......... .......... .......... .......... 912 AGGAGACACT ATTAACCAAT TCATTGACGG CAATTTCATC AACACAAGAG ACCCTTGGCT 76911 .......... .......... .......... .......... .......... .......... 912 ACCCAAGAGT GATATTCCCT TTGAGCCTGG CATTATGAAG GTCTAATTAA CCTATATCAT 76971 .......... .......... .......... .......... .......... .......... 912 TTATTTCCAT ACAAGGACTA TTTTGTTTTA GATAATTAAT ATATTTTTGC TCCTTTCTTT 77031 .......... .......... .......... .......... .......... .......... 912 AGACATCTTA TATTCACACA ATATTAAGAT GATAATAATA TGTTTTTTCT ATCCACCTAT 77091 .......... .......... .......... .......... .......... .......... 912 ATATGACTCC ACATGAAATA CAACCATTTT TCTTTGTATC AAATCAACAT TGTACGAAAT 77151 .......... .......... .......... .......... .......... .......... 912 GAAATTTAAA AAAACAGTAA AAGTATTAAG ATCAGGCCAA GTTACTGAAA AAAAAGGTAG 77211 .......... .......... .......... .......... .......... .......... 912 CAAGAAATTG ATTGGGAGAA AATTCTCTTT TCTGTATGTT TGACATCATT GTGCAGATGC 77271 .......... .......... .......... .......... .......... .......... 912 ATATATATAC AACTACGAAA TACGTGAACA ACAAACTGAG TAAAGATAAT TGAGAACATG 77331 .......... .......... .......... .......... .......... .......... 912 ACTGACCAAC AATAAAACCT GTCTTACTTA ATCTAACAAA CTAAGTGTCC TACTTTGTTT 77391 .......... .......... .......... .......... .......... .......... 912 AAAAAATTAA AAGATAATTA ATTACAAGGA ATAATATATA TATATATATA TATATATATA 77451 .......... .......... .......... .......... .......... .......... 912 TATATATATA TATATATATA TATATATATA TGACTAATCT TCATAAACTT AGTGAACCTC 77511 .......... .......... .......... .......... .......... .......... 912 TGTCTTTATA ACTGTTTCAC CATTATCTAC ACCACCACCT CCCCCCTTAA GTTGGAGGGC 77571 .......... .......... .......... .......... .......... .......... 912 GAGGAAAACA CACCCAACTT GCCAGAAAGG TTATTGTGAA GAGTCTCTGT TAAGGGCTTG 77631 .......... .......... .......... .......... .......... .......... 912 GTGAATAAAT CGGCTAATTG AGACGAAGAT GGAGTGAATG AGACTGAAAT TAAACCAGCA 77691 .......... .......... .......... .......... .......... .......... 912 ATGAAAGTAT TTAAACAACA TTTAGTACAA GATTTGTGTA CTTCTTATTG TTGCAGCGGA 77751 .......... .......... .......... .......... .......... .......... 912 ATAAAAATTC ACGAATTGAA TGATTTTCTC CAAATCCTTC TTTGAATCAC TAGGAAACAA 77811 .......... .......... .......... .......... .......... .......... 912 AGATAGTTTC ACAAACTAAA TGTCTTATTG TGGTTTAGTC TAAACTTTAG AGTTGTTTAT 77871 .......... .......... .......... .......... .......... .......... 912 TGGTATTTTT TGTGTTTTTT TTCACTTTCT GAACCGTTAA TCAAAAGAAA AAGCCAAAAA 77931 .......... .......... .......... .......... .......... .......... 912 GAATTTAATT TAAAAAAGGT AATTATTAAC GTTGGAATAG TTACATGTGA CTGTTCCCAC 77991 .......... .......... .......... .......... .......... .......... 912 CCCTTTTTTA AATTAATACT TATCTTTTTC TCTTTTCTTT CTATTAAAAG AAATTTTGGG 78051 .......... .......... .......... .......... .......... .......... 912 TTTGTTCGGG TCGGGTCAAT CCACATGGGC GACCCAAATA CAAAACTTAC ATCTCCCACT 78111 .......... .......... .......... .......... .......... .......... 912 TTGCACATGG TAGACAAGAC CCAAGCCAAC ATTACATCAG CTAAACACAA TTCATATGAC 78171 .......... .......... .......... .......... .......... .......... 912 AAATAGTTCA TGCGATCTGT GAGCATCAAG AGCTTACCTT TAAGGTTTTA CAAGCCCTAC 78231 .......... .......... .......... .......... .......... .......... 912 ATAGGAATTC AATCACATAT GGAAAGAATT CATCATCTTA AAGAGGTTAA CTCGAGTTCA 78291 .......... .......... .......... .......... .......... .......... 912 TGTTTAACTT TATACACACA ATTACACTTA ATGCCAATAT GGTTAGTGTA ATAGCCGGCT 78351 .......... .......... .......... .......... .......... .......... 912 TGTGTATATA AGTTTATTAT TCATTTAATG TATTTCCTTT CTACTTGAAT TTATCCTATT 78411 .......... .......... .......... .......... .......... .......... 912 CAACTGCTTT CCTAGACATG CACTGCATTG TCAAATCATT CATAACTACT AGTAACATGC 78471 .......... .......... .......... .......... .......... .......... 912 TAAAGCAGCA ACATCGATTG AAACTTTAGA AAATAGCAAA AGGTCAAAGG GTATTTCATT 78531 .......... .......... .......... .......... .......... .......... 912 GAAAATTTAT TTTAATTTTT TTGGGTCTCA CACAATAAAG AAGCAGGGAA TATTCTTTCA 78591 .......... .......... .......... .......... .......... .......... 912 TTGACCCGTT GATCGCTAGA CACACGTGGT ATGAAACACG TGCTACAATA TTTTTACCTT 78651 .......... .......... .......... .......... .......... .......... 912 ATACTGGTGT ATGTGTCTCA TCATCCAAAT TATCCAACAT CGTATAGATC TCGGTTTAAA 78711 .......... .......... .......... .......... .......... .......... 912 CACCTCAAGA TGCTTAACCC TAGTTTCTCT TTTCGAGGTA TCTTTAAACG CACTTTCTTA 78771 .......... .......... .......... .......... .......... .......... 912 GAGAAACATT TGTCATAAAA CAAGTCTTAA TATGGTGGTG AAATTCATCT TTTCACGTTC 78831 .......... .......... .......... .......... .......... .......... 912 TTCGACGTAA GAGGTGATTG CTCGTGTGAG AGAGTCAATC ATGCGACTTG TTTGACACAC 78891 .......... .......... .......... .......... .......... .......... 912 TTTATTTTTT TAAAAAATAA ATATCACATG CATACTACAT TTGAACATAA ATTTAATTGT 78951 .......... .......... .......... .......... .......... .......... 912 TTTATATATA GAGGAGAATA TTATAACAAT AAATGATTTT ACAATACTGA AATATCATCA 79011 .......... .......... .......... .......... .......... .......... 912 TACTTTACGT AAACCTAGAG CCTTAACATG ATTTTCAAAC AAGTCTCTAG AGATGGCCTT 79071 .......... .......... .......... .......... .......... .......... 912 CATAAAAAGA TCTGCTATCA TTTCACGTGT AGGAATGTAT TGTAAAGTTA TTTCTCCATT 79131 .......... .......... .......... .......... .......... .......... 912 TATGTCTTTC ACAAAATTAT ACTTGATGTC GATGTGTTTG GTTTTTGTAT GATACTCAAG 79191 .......... .......... .......... .......... .......... .......... 912 ATCCTTTGTG TATGCGGTAA CCGCTTGACT ATCACAATAT AGAATCATGG GACCCTTCAA 79251 .......... .......... .......... .......... .......... .......... 912 ATTCTTTGCA ATACTAAAAT GTTCAAAGAA TCTCTTTAAC CAAACAACTT CTTGTACTGC 79311 .......... .......... .......... .......... .......... .......... 912 AGACACACAA ACCAAAAATT CAAATTCCAT TGTCGAAAGA GCTGTGCAAG TTTTCTTCTT 79371 | ||| | |||| | | ||| || | | || | || ..GGTCTCAA GAC-AAAA-T CTAATCTCAG ACGC-AGAGC GATGG..... .......... 952 ACTTTTCCAT GAAATAGCAC CAACATTTAG TAAGAAACCA TAACCGGATG TTGATTTTCT 79431 .......... .......... .......... .......... .......... .......... 952 ATCATCTCGA TCAATAGCCC AATCTGCATC TGTATAACCT CTTATGAATA AAGCACATCC 79491 .......... .......... .......... .......... .......... .......... 952 ACTATAACAT AGTGCATGAT CTATAGTTTC TTTCATGTAT CGAAATATAC TCTTTACAAC 79551 .......... .......... .......... .......... .......... .......... 952 TTTCCAATGA TCTCTTCCAG GATTGGATTG ATACCTACTA ACTATATTTA CGGCATAACA 79611 .......... .......... .......... .......... .......... .......... 952 AATGTCTGGG CGAGTACACA TCATAACATA CATCAAACTC CCGACAACAC TAGAATAAGG 79671 .......... .......... .......... .......... .......... .......... 952 ACCTCGAGAC ATGCTTTCCT TTTCCTTTTC AGTATTTGGA CACATTTCAA GGCTTAAAAT 79731 .......... .......... .......... .......... .......... .......... 952 TTCACCCCTT TCTACAGGAG TATCCATGGA TTTGCAACTA TTCATTCGAA AACGTTCCAA 79791 ||| ||| | ||| |||| | | |||| || .......... .......GAG AATCGGAAAA ATTGAAACT- TCGACCCGAA AAA....... 987 TATTTTCTTT ATATAATTTT CTTGAGATAA ACTCAAAAAC ATCTTGGAAC AATCTCTTTG 79851 .......... .......... .......... .......... .......... .......... 987 GATTTTAACA CCCAATATAT AATATGCTTC ACCCATATCT TTCATATCAA ATGATTTTGA 79911 .......... .......... .......... .......... .......... .......... 987 AAGTCATGAC TTGACAATTT TTGCATATTC CAAATTATTT TCACCAAATA AAATATCATC 79971 .......... .......... .......... .......... .......... .......... 987 TACCTAAAGA GAAAGAATTA CAAATTTTCC ATTGGACTTT TTACATAGAT GCAATGGTCT 80031 .......... .......... .......... .......... .......... .......... 987 TCATCGATCA TGGTGAAATA ATATGATATC ACAACCTTGT CACGACTAAA ATCTAGACCG 80091 .......... .......... .......... .......... .......... .......... 987 CAAACCAGAC CGGCCATGTT GACCTCTCAG AGGTCGCAAA CAAGCCTACT TACGTCATCC 80151 .......... .......... .......... .......... .......... .......... 987 TTACATTACA TAGGTTAATT TTAGCTGAAA ATTTGAAACT TTTGATTCTT TAAACATACT 80211 .......... .......... .......... .......... .......... .......... 987 TTATAAACAT TCTTAACACT TCATAATCGT TCATCATCAA TAATCTAATA TTAAAGAGAT 80271 .......... .......... .......... .......... .......... .......... 987 AAGCAACTGA AAGAAATAGT TCAGTAAGTC TTAATTGTAT AATTGCCAAA ATGGCACCAA 80331 .......... .......... .......... .......... .......... .......... 987 TACAATGTTT GAATCAAAAC AGGAAAGAAA CGCTAGTGGA ACATGCTTCG CTAGCTCAAT 80391 | | || || | .......... .......... ..GTGA-AAG AGCAA..... .......... .......... 999 TCAAAAACTA CGCAAGAATG TAATACAGTA GCATCCTCAA AAGCACGAGG ACCTACCAAA 80451 .......... .......... .......... .......... .......... .......... 999 CTCCGAATGA ATGCTGACGT CCGGATAGCA GCAACAACGA ACCTATAGCT CTACGCCCAC 80511 .......... .......... .......... .......... .......... .......... 999 CTGTGCCTGC ACCTAAAAGT AGATATTTGT ATGGAACTAA CACTTGTACT AAGTATGCGT 80571 .......... .......... .......... .......... .......... .......... 999 ATCTTCAAGA ACACACCAAG CACATGCATA ACAAGGAATA ACTCTTTCCT AAAAACATGA 80631 .......... .......... .......... .......... .......... .......... 999 TTTATGGAAG GTTAAGTCAG TGGACATGCT AAATTGAGGT TACGAAAGTT AGTGAACTTT 80691 .......... .......... .......... .......... .......... .......... 999 CCAAATTGAG TTAGGAAGGT TATGCCATGA GAGTAACATG CATCATTATA ATAATCGTAT 80751 .......... .......... .......... .......... .......... .......... 999 TGCACACAAC ACATAACATC TTTATACATA TCATAGCACA TAACATATAA CACATAACTT 80811 .......... .......... .......... .......... .......... .......... 999 CTTTCATATT ATTCATTCAT ATGTCATGAG ACCTTGTCAT CATGGACTTG GTATTTAGAC 80871 .......... .......... .......... .......... .......... .......... 999 GTTTCAAAAT GAGGGCTCAA CATATGTGAC CTAAACTAGG GAGTCTTCAT TAGAAAACAT 80931 .......... .......... .......... .......... .......... .......... 999 AGAGTCTGCT TCATCCATTC ATACATACTT CATTTCATTT CATTCATAGG CCAGTGTGGA 80991 .......... .......... .......... .......... .......... .......... 999 CACCACCTAT ACCTAGGATG TAGTTTAAGA CTCTCATTGG GTTTGCTGTG CAATGATCAG 81051 .......... .......... .......... .......... .......... .......... 999 GAATAACCTA ACGTCATTAC CTGAGTCTAG ATCACCTCTT GATTATCATA TCCTAACAGC 81111 .......... .......... .......... .......... .......... .......... 999 TTCGGTATCA TTAATTTCTT TATATGATTT ATTTGAGGCT GACCTCATTC ATTCATTGGG 81171 .......... .......... .......... .......... .......... .......... 999 AAATTTAACT TTAAAAGACA TATATCATGT GAGCATCATG AAATCAGTGT CACCCCCACA 81231 .......... .......... .......... .......... .......... .......... 999 CTGAAAAGAG GTGGAATCAC CGGCCAAAGT GACTCAATAA CATGCTAGCG TATATGGGAA 81291 .......... .......... .......... .......... .......... .......... 999 TTCAACCCCA TTAGATCCCT ATATTGGCAG TATAGGTTCA AAGACTAGGA GATGTATGAA 81351 .......... .......... .......... .......... .......... .......... 999 GACACATACC CGGCAAGCCG GACAGTCTCA TCTCATGAGA GTTACCTGAA CCTTTGCCCT 81411 .......... .......... .......... .......... .......... .......... 999 TCCCAAAAGA AGGCATCACC GCACATAGCT AGCCTATCGA TGCTCAGTAT AAAGTTTCAT 81471 .......... .......... .......... .......... .......... .......... 999 TATATTCAAC TCATACGTCA TGGAAGCTGA CTTCTAGTAT GAGGACAACA TAGCTCATTG 81531 .......... .......... .......... .......... .......... .......... 999 GATGATTTAT CATCTCATCA TTAGTATTAA GTGTGTTAAA CTCAATACTT TCATTAGTGT 81591 .......... .......... .......... .......... .......... .......... 999 GTTCATAGAT ATTGGTCTTT TCATTATCTT ACACTCTCAT TGGTGAGTAC ATATTGGTAA 81651 .......... .......... .......... .......... .......... .......... 999 CATTTACTTA GGCTCATTTG AGATTGCTCT CATCATATAC ATTAGTCTCA TATCATGTTG 81711 .......... .......... .......... .......... .......... .......... 999 TCACCACATT CTTCATTATT AGAACCCTTG CTTTTCATAA TAACTCACCT CCTATTACGT 81771 .......... .......... .......... .......... .......... .......... 999 GAATATTCAT TTCTTCATTT CATAGTTCAT CTCATCATAT GCCAATGCAG TTGTCCATTC 81831 .......... .......... .......... .......... .......... .......... 999 AGTGTATCTT ACACTCGTAC TTAACCCTCC TAAGGTTCAT CATTTAATTA CGTACATCTT 81891 .......... .......... .......... .......... .......... .......... 999 AGGTTCACTT ATTTTTGAAC GTATGTTAGA CTCATGTGTC TATACATAAA AGCCATGGGG 81951 .......... .......... .......... .......... .......... .......... 999 CTTCATTCAT AGTTCGCTAA GTGATTCTTA CTTTCATAAG ATTATGTATT ACAAGACTTA 82011 .......... .......... .......... .......... .......... .......... 999 TGTATCTTGT ATATATGACA AGATCTTGAT TTTTGATCTA AGTAGATGGC ATTACTCTTG 82071 .......... .......... .......... .......... .......... .......... 999 GATATTTTAC TCACGTATGA CTTATGTATC AATATGGAAG TTTGGGCACG AGAACCCAAG 82131 .......... .......... .......... .......... .......... .......... 999 TCTTGAATCA CTTGGATATC ATTTATATTT TTCATCAATT TTATTTCT-A ATATTCATAA 82190 |||||||||| |||||||||| |||||||||| ||||| ||| |||||||| | |||||||||| TCTTGAATCA CTTGGATATC ATTTATATTT TTCATTGATT TTATTTCTAA ATATTCATAA 1059 CATTATA-CT CTAAATTAAA TCTCAACATT TATATCGAAG GATTAATTTT CTATTTTAAT 82249 ||||| | || ||||||||| |||||||||| | || || ||||||| | |||||||||| CATTAGATCT TTAAATTAAA TCTCAACATT TTCATGAAAT AATTAATTAT CTATTTTAAT 1119 TAGAATTCTA AATTAAATCT CAACATTTAC ATGAGAGGAT TAATTTTCTA TTTTAATTAG 82309 || ||||||| |||||||||| ||| |||| | || | |||| | |||||| ||| |||||| TAAAATTCTA AATTAAATCT CAATATTTTC ATCA-AGGAA ATAGTTTCTA TTTCAATTAG 1178 AATT 82313 |||| AATT 1182 hqPGS_C01HBa0163B20.1+_SGN-U317281- (73913 73939,74571 74587,79314 79356,79749 79784,80354 80366,82132 82313) ******************************************************************************** EST sequence 54 -strand 906 n (File: SGN-U340346-) 1 ACAACTCCCA CTGNCATGTG CTATATAGGT CTAGTGCAGA CCATAGCATA CATCAATCTC 61 CCACTGCTGA AAGCATATCA AACAAGTGCC ATATGATCAC ACTCCATTGC CATTCTGGGG 121 CGCTTCTCCT TTGACAATTT AAAGTGATTT TCTAATGGAG TAGTCTTGGG CTTAGAATCA 181 TTAACCCTGA ATCTGCTCAG CACCTTCTCA ATTTACAACA CCTGAAATAG ATTTAAAGTG 241 CCAGCAAATC TATGCCGGGA AATCTTCATC CCCAAAATCT GCTTCGCTGG ACCCAAATCT 301 TTCAATTGCT GCAGACAACG TTGTCTTTAG ATTTTTAATC TCCCACATAA AAGATCCTGC 361 AATTAACATA TCATCCACAT ACAAGAGTAG AACGACATAT GAATCAGTGT ATTTCTTGAA 421 GTAACAACAA GGATCCTTTT CAGTTTTGTA GAATCCACTC TTGGTCATGA AGGAGTCAAA 481 CTTCTTGTAC CACTTCCTTG GTGCTTGCTT TAGTCCATAC AAGGTTCCTG GTGAGGTTTC 541 ATACCATGTT ATCCTTGCTT GGAACCAAAA ATCCTTCCGG TTGTTTCATA TATATCTCTT 601 TGTGCAGATC TCCATGTAAA AACGTTGTTT TTACATCCAT TTGCTCTAGA TGCAAATTCT 661 CCGATGCAAC AATACTCAAC AGAATTCGAA TAGAGGTTAA CTTCACAAAA GGAGAAAATA 721 TTTCAATAAC ACCTTTCCTT TGTGAATATC CTTTAATCAC TAAATGATCT TGGAACCTTC 781 TGTATCTATC TTGTTTTGTC TTAATTCTGA ACACCCGCTT GTTCAACAAA GCCTCGTGCC 841 GAATTCCTGC AGCCCGGGGG ATCCACTAGT TCTAGAGCGG CCGCCACCGC GGGGAGCTCC 901 AGCTTT Predicted gene structure (within gDNA segment 68888 to 76294): Exon 1 72895 73734 ( 840 n); cDNA 1 830 ( 830 n); score: 0.861 MATCH C01HBa0163B20.1+ SGN-U340346- 0.861 840 0.927 C PGS_C01HBa0163B20.1+_SGN-U340346- (72895 73734) Alignment (genomic DNA sequence = upper lines): ACAACTCCCA ATG-CATGTG GTATATCAGG TCTAGTGCAG ACTATAACAT ACATCAAACT 72953 |||||||||| || |||||| ||||| ||| |||||||||| || ||| ||| ||||||| || ACAACTCCCA CTGNCATGTG CTATAT-AGG TCTAGTGCAG ACCATAGCAT ACATCAATCT 59 ACCAACTGCT G-AAGCATAT GGAACAAGTG CCATGTGATC ACGCTCC-TC GGAAGTCTTG 73011 || |||||| | |||||||| |||||||| |||| ||||| || |||| | | | ||| | -CCCACTGCT GAAAGCATAT CAAACAAGTG CCATATGATC ACACTCCATT GCCATTCTGG 118 GGTGACTGCT CCTTTGACAA TTTAAAGTGA TTTGCCAATG GAGTAGTCCT GGGTTTAGCA 73071 || | || || |||||||||| |||||||||| ||| | |||| |||||||| | ||| |||| | GGCG-CTTCT CCTTTGACAA TTTAAAGTGA TTTTCTAATG GAGTAGTCTT GGGCTTAGAA 177 TCATTAACCC TGAATCTGCT CAGTACCTTC TCAATGTACA ACTTCTGAGA TAGATTTAAA 73131 |||||||||| |||||||||| ||| |||||| ||||| |||| || |||| | |||||||||| TCATTAACCC TGAATCTGCT CAGCACCTTC TCAATTTACA ACACCTGAAA TAGATTTAAA 237 GTGCCAACAG ATCTATCCCG AGAAATCTCC ATCCCCAAAA TCTATTTTGC TGGACCCAAA 73191 |||||| || |||||| ||| ||||||| | |||||||||| ||| || || |||||||||| GTGCCAGCAA ATCTATGCCG GGAAATCTTC ATCCCCAAAA TCTGCTTCGC TGGACCCAAA 297 TCTGTCATCT CAAATGCTGT AGACAACCTT GTCTTCAGAT TGTTAATCTC TCTCATACTA 73251 || | | | ||| ||||| ||||||| || ||||| |||| | |||||||| | |||| | TC--T--T-T CAATTGCTGC AGACAACGTT GTCTTTAGAT TTTTAATCTC CCACATAAAA 352 GATCTTACAA TCAACATATC ATCCATATAC AAGAGTAGAA CGACATATGA ATCAGTGTAT 73311 |||| | ||| | |||||||| ||||| |||| |||||||||| |||||||||| |||||||||| GATCCTGCAA TTAACATATC ATCCACATAC AAGAGTAGAA CGACATATGA ATCAGTGTAT 412 TTCTTGAAGT AACAACAAGG ATCCTTTTCA GCTTTGCAGA ATCCACCCTT GGTCATGAAG 73371 |||||||||| |||||||||| |||||||||| | |||| ||| |||||| ||| |||||||||| TTCTTGAAGT AACAACAAGG ATCCTTTTCA GTTTTGTAGA ATCCACTCTT GGTCATGAAG 472 GAGTTAAACT TCTTGTACCA CTGCCTTGGT GCTTGCTTTA GTCCATACAA -GCTCCTGGT 73430 |||| ||||| |||||||||| || ||||||| |||||||||| |||||||||| | ||||||| GAGTCAAACT TCTTGTACCA CTTCCTTGGT GCTTGCTTTA GTCCATACAA GGTTCCTGGT 532 GAGCTTGCAC ACCATGTGTT CCTTGCCTGG AACTACAAAT CCTTCCGGTT GCTGCATATA 73490 ||| || || ||||||| | |||||| ||| ||| | |||| |||||||||| | | |||||| GAGGTTTCAT ACCATGTTAT CCTTGCTTGG AACCAAAAAT CCTTCCGGTT GTTTCATATA 592 GATCTCTTTG TCCATATCTC CATATAAAAA CACTGTTTTT ACATCCATAT GCTCTAGATG 73550 ||||||||| | || ||||| ||| |||||| | ||||||| |||||||| | |||||||||| TATCTCTTTG TGCAGATCTC CATGTAAAAA CGTTGTTTTT ACATCCATTT GCTCTAGATG 652 CAAATTCTCC GATGCAACAA CACTCAACAG AATTCGAATA GAGGCTAACT TCACAACAGA 73610 |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||| || CAAATTCTCC GATGCAACAA TACTCAACAG AATTCGAATA GAGGTTAACT TCACAAAAGG 712 AGAAAATATT TAAGCATAAT CAATACCTTT CCTTTGTGAA TATCCTTTAA CCACTAAACG 73670 |||||||||| | | ||| || |||||| |||||||||| |||||||||| ||||||| | AGAAAATATT T---C--AAT -AACACCTTT CCTTTGTGAA TATCCTTTAA TCACTAAATG 766 AGCCTTGAAC CTTCTTTTGC CATCTGGTTC ACTCTTGATT CTGAACACCC ACTTATTTAA 73730 | | | |||| ||||| | | |||| ||| |||| ||| |||||||||| ||| || || ATCTTGGAAC CTTCTGTATC TATCTTGTTT TGTCTTAATT CTGAACACCC GCTTGTTCAA 826 CAAA 73734 |||| CAAA 830 hqPGS_C01HBa0163B20.1+_SGN-U340346- (72895 73734) ******************************************************************************** EST sequence 13 +strand 976 n (File: SGN-U345337+) 1 GCCGCTCTAG AACTAGTGGA TCCCCCGGGC TGCAGGAATT CGGCACGAGG TGTTGATCAA 61 GTATGCAGGT GTGCTCACAA CACCGCCCAA AATGTTTTGG GCAGCCCATA GTGTATCCTC 121 ATACTCCTTG CACGCTCATT CAATGTTCTG TTCATCCACT CAGCAATTCC ATTCTGCCTT 181 GCCTTACAAG GAACTGTTCT CATCAATTTG ATTCCCTCAG CTGCACAAGA TGCCTTGAAC 241 TCTGATTTGT CATCCTCTCC TCCATTGTAA GACCTTAGGC ATTTGACTTT CAAACCGGTT 301 TGATTCTCAA CTTCAGCTTT CCACTTCTTG AAAGTTGCAA ACACATCTGA CTTATGCTTC 361 AAGAAGTAAA CTCATACCTT CCTGCTGAAA TCATCAATGA AGGTATTATA GAATCTGCTT 421 TGACATATCT GGGGGTTACT CTTCTCCAAC TCAACCTCAA CTCTCACTTG CTTGGTAATC 481 TCTAGAAACT TCTGCTCTCT GTCCTTGTAC AGGACAGACT CATCAAATAT CACATCACAA 541 TGTCTCAGGA TCTTTCTGTT CTTGTCATCC CAAAACCTGT AACCAAACAA ATCAGAACCA 601 TAGCCTATGA AGTAACACTT CACAGCCTTG GCATCAAGCT TGTCTCTCTT TTCTAGATCA 661 ACATGAACAT AAGCAGTGCA ACCAGAAGTC CTTAAGTGTG AGTACTTGAG TTCTTTTCTT 721 GTCCACACCT NCAATTAACG TGACAAAGAT ACTCGAAAAA AGCCGGTCAA TGTTCAACGT 781 TCATACGTNT ACTACAAAAC ACACAAACAC TCAATGAAAT CACCTACAAC TTAACAATTT 841 CCAACAATGG AATAACAATG TTGGTGCCAC AAGATATGCA TTTTTAAACA TTAAAGCAGG 901 CCCCTTAAAT TCTTTTACGA ACAACAAAAA ACCTGACTTA ACCCAATCCC CAATCCTTCC 961 TACACACCAA TTCAAA Predicted gene structure (within gDNA segment 68386 to 77911): Exon 1 74192 74226 ( 35 n); cDNA 1 35 ( 35 n); score: 0.514 Intron 1 74227 74343 ( 117 n); Pd: 0.958 (s: 0), Pa: 0.000 (s: 0.68) Exon 2 74344 74726 ( 383 n); cDNA 36 417 ( 382 n); score: 0.898 MATCH C01HBa0163B20.1+ SGN-U345337+ 0.898 418 0.428 C PGS_C01HBa0163B20.1+_SGN-U345337+ (74192 74226,74344 74726) Alignment (genomic DNA sequence = upper lines): GCCTATGAAG TAACACTTCA CAGCCTTGGC ATCAGGCTTG TCTCTCTTTT CTGGATCAAC 74251 ||| | || | | | | || ||| ||| GCCGCTCTAG AACTAGTGGA TCCCCCGGGC TGCAG..... .......... .......... 35 ATGAACATAA CAAGTGCAAC CAAAAGTCCT CAAGTGTGAG TACTTAAGTT CTTTTCCTGT 74311 .......... .......... .......... .......... .......... .......... 35 CCACACCTCC TCTGGAATCT TGAACCCTAA AGGAACTGAT GGTCCCCTAT TGATCAAGTA 74371 ||| | | | |||||||||| .......... .......... .......... ..GAATTCGG CACGAGGTGT TGATCAAGTA 63 TGCAACTTTG CTCACAACAT CCGCCCAAAG TGTTTTGGGC AGCCCACAGT GTATCCTCAT 74431 |||| | || ||||||||| ||||||||| |||||||||| |||||| ||| |||||||||| TGCAGGTGTG CTCACAACA- CCGCCCAAAA TGTTTTGGGC AGCCCATAGT GTATCCTCAT 122 ACTCCTTTCA AGCTCATTCA ATGTTCTGTT CATCCTCTCA ACAATTCTAT TCTGCCTTGC 74491 ||||||| || ||||||||| |||||||||| ||||| |||| |||||| || |||||||||| ACTCCTTGCA CGCTCATTCA ATGTTCTGTT CATCCACTCA GCAATTCCAT TCTGCCTTGC 182 CTCACCAGGA ACTGTTCTCA TCAATCTGAT TCCGTCAACT GCACAGAATG CCTTGAACTC 74551 || || |||| |||||||||| ||||| |||| ||| ||| || ||||| ||| |||||||||| CTTACAAGGA ACTGTTCTCA TCAATTTGAT TCCCTCAGCT GCACAAGATG CCTTGAACTC 242 TGATTTGTCA TACTCTCCTC CATTGTCAGA CCTTAGGCAT TTGACTTTCA AACCGATCTG 74611 |||||||||| | |||||||| |||||| ||| |||||||||| |||||||||| ||||| | || TGATTTGTCA TCCTCTCCTC CATTGTAAGA CCTTAGGCAT TTGACTTTCA AACCGGTTTG 302 ATTCTCAACT TCAGCTTTCC ACTTCTTGAA AGTTGCAAAC ACATCTAACT TATGCTTCAA 74671 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ATTCTCAACT TCAGCTTTCC ACTTCTTGAA AGTTGCAAAC ACATCTGACT TATGCTTCAA 362 GAAGTAAACC GATACCTTCC TGCTGAAATC ATCAATGAAG GTAACATAGA ATCTG 74726 ||||||||| ||||||||| |||||||||| |||||||||| ||| ||||| ||||| GAAGTAAACT CATACCTTCC TGCTGAAATC ATCAATGAAG GTATTATAGA ATCTG 417 hqPGS_C01HBa0163B20.1+_SGN-U345337+ (74192 74226,74344 74726) ******************************************************************************** EST sequence 12 +strand 976 n (File: SGN-U345337+) 1 GCCGCTCTAG AACTAGTGGA TCCCCCGGGC TGCAGGAATT CGGCACGAGG TGTTGATCAA 61 GTATGCAGGT GTGCTCACAA CACCGCCCAA AATGTTTTGG GCAGCCCATA GTGTATCCTC 121 ATACTCCTTG CACGCTCATT CAATGTTCTG TTCATCCACT CAGCAATTCC ATTCTGCCTT 181 GCCTTACAAG GAACTGTTCT CATCAATTTG ATTCCCTCAG CTGCACAAGA TGCCTTGAAC 241 TCTGATTTGT CATCCTCTCC TCCATTGTAA GACCTTAGGC ATTTGACTTT CAAACCGGTT 301 TGATTCTCAA CTTCAGCTTT CCACTTCTTG AAAGTTGCAA ACACATCTGA CTTATGCTTC 361 AAGAAGTAAA CTCATACCTT CCTGCTGAAA TCATCAATGA AGGTATTATA GAATCTGCTT 421 TGACATATCT GGGGGTTACT CTTCTCCAAC TCAACCTCAA CTCTCACTTG CTTGGTAATC 481 TCTAGAAACT TCTGCTCTCT GTCCTTGTAC AGGACAGACT CATCAAATAT CACATCACAA 541 TGTCTCAGGA TCTTTCTGTT CTTGTCATCC CAAAACCTGT AACCAAACAA ATCAGAACCA 601 TAGCCTATGA AGTAACACTT CACAGCCTTG GCATCAAGCT TGTCTCTCTT TTCTAGATCA 661 ACATGAACAT AAGCAGTGCA ACCAGAAGTC CTTAAGTGTG AGTACTTGAG TTCTTTTCTT 721 GTCCACACCT NCAATTAACG TGACAAAGAT ACTCGAAAAA AGCCGGTCAA TGTTCAACGT 781 TCATACGTNT ACTACAAAAC ACACAAACAC TCAATGAAAT CACCTACAAC TTAACAATTT 841 CCAACAATGG AATAACAATG TTGGTGCCAC AAGATATGCA TTTTTAAACA TTAAAGCAGG 901 CCCCTTAAAT TCTTTTACGA ACAACAAAAA ACCTGACTTA ACCCAATCCC CAATCCTTCC 961 TACACACCAA TTCAAA Predicted gene structure (within gDNA segment 72882 to 81034): Exon 1 74361 74736 ( 376 n); cDNA 53 427 ( 375 n); score: 0.910 Intron 1 74737 75092 ( 356 n); Pd: 0.981 (s: 0.82), Pa: 0.000 (s: 0.58) Exon 2 75093 75184 ( 92 n); cDNA 428 513 ( 86 n); score: 0.565 Intron 2 75185 79313 (4129 n); Pd: 0.000 (s: 0.56), Pa: 0.917 (s: 0.66) Exon 3 79314 79354 ( 41 n); cDNA 514 553 ( 40 n); score: 0.659 MATCH C01HBa0163B20.1+ SGN-U345337+ 0.842 509 0.522 C PGS_C01HBa0163B20.1+_SGN-U345337+ (74361 74736,75093 75184,79314 79354) Alignment (genomic DNA sequence = upper lines): TTGATCAAGT ATGCAACTTT GCTCACAACA TCCGCCCAAA GTGTTTTGGG CAGCCCACAG 74420 |||||||||| ||||| | | |||||||||| ||||||||| ||||||||| ||||||| || TTGATCAAGT ATGCAGGTGT GCTCACAACA -CCGCCCAAA ATGTTTTGGG CAGCCCATAG 111 TGTATCCTCA TACTCCTTTC AAGCTCATTC AATGTTCTGT TCATCCTCTC AACAATTCTA 74480 |||||||||| |||||||| | | |||||||| |||||||||| |||||| ||| | |||||| | TGTATCCTCA TACTCCTTGC ACGCTCATTC AATGTTCTGT TCATCCACTC AGCAATTCCA 171 TTCTGCCTTG CCTCACCAGG AACTGTTCTC ATCAATCTGA TTCCGTCAAC TGCACAGAAT 74540 |||||||||| ||| || ||| |||||||||| |||||| ||| |||| ||| | |||||| || TTCTGCCTTG CCTTACAAGG AACTGTTCTC ATCAATTTGA TTCCCTCAGC TGCACAAGAT 231 GCCTTGAACT CTGATTTGTC ATACTCTCCT CCATTGTCAG ACCTTAGGCA TTTGACTTTC 74600 |||||||||| |||||||||| || ||||||| ||||||| || |||||||||| |||||||||| GCCTTGAACT CTGATTTGTC ATCCTCTCCT CCATTGTAAG ACCTTAGGCA TTTGACTTTC 291 AAACCGATCT GATTCTCAAC TTCAGCTTTC CACTTCTTGA AAGTTGCAAA CACATCTAAC 74660 |||||| | | |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AAACCGGTTT GATTCTCAAC TTCAGCTTTC CACTTCTTGA AAGTTGCAAA CACATCTGAC 351 TTATGCTTCA AGAAGTAAAC CGATACCTTC CTGCTGAAAT CATCAATGAA GGTAACATAG 74720 |||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||| |||| TTATGCTTCA AGAAGTAAAC TCATACCTTC CTGCTGAAAT CATCAATGAA GGTATTATAG 411 AATCTGGATC CTCCAAGTAA TGATACTGGA TATGGTCCCC AAACATCTAT ATGGACCATT 74780 |||||| | | | AATCTGCTTT GACATA.... .......... .......... .......... .......... 427 TCCAACCGCA CTTTCTTTGG CTCTCTAGGA GTCCTTGTGA AGCTTACTCT TTTCTGTTTT 74840 .......... .......... .......... .......... .......... .......... 427 CCCATAACAC AGCTCTCGCA AAGACCCATA TCAACAGACT TCAGACCCTC TAATTCTCCT 74900 .......... .......... .......... .......... .......... .......... 427 TTTGCAACCA ACATCTTCAT TCCTTTAGTA CTCATGTGTC CAAGTCTGTT GTGCCACAGA 74960 .......... .......... .......... .......... .......... .......... 427 CATGAACCGG AAACACCTTC AGCAACAGCG ACCTAGTTTA TACACTCTGC AGTGGTGTAC 75020 .......... .......... .......... .......... .......... .......... 427 AAGGTTCCAG ATTTGGTGCC ACGAGCTACT ACCATAGCAA CTTTCATGAT CTTCCACGAA 75080 .......... .......... .......... .......... .......... .......... 427 CATTTCCCTA ACTCTGCTGC ATATCCCGTG CTATCCAACT GACCGACAGA GATCAATTTT 75140 |||| | || | | | | ||||||| | | || ||| || .......... ..TCTGGGGG TTA-CTC-T- -TCTCCAACT CAACCTCAAC TCTCACTTGC 471 TTGTTGATCC CAGGAATATA TCTGACATCC TCCAATGTCC ATTGGTTTCC CGAGGTGGTC 75200 ||| | ||| | ||| | |||| || | ||| | | | TTGGTAATCT CTAGAA-ACT TCTGCTCTCT GTCCTTGTAC A-GG...... .......... 513 TTTATGCAAA CATCCCCCTT TCCTTCAATC TCTAAGGCTT TATTGTCAAC AAGATATACT 75260 .......... .......... .......... .......... .......... .......... 513 TTTCCAAAAT TTCCAGATTT GAAATTTTGG AACAACTCCT TGCTTGAAGA TGAATGGAAA 75320 .......... .......... .......... .......... .......... .......... 513 GATGCACCAG AATCCAAAAT CCATGATTCA ACCGGGCTAT TCACACTAAG GATTAGAGCA 75380 .......... .......... .......... .......... .......... .......... 513 TCCCCAATGT CCTCTGATGA ATTTACAGAA TCATTGTCAT CTCCAAATTT TGTGATTTTG 75440 .......... .......... .......... .......... .......... .......... 513 TTTCTTCTTT TGCTTTGTAT AGTTCGTCTA AAAGTGCCCT TTTTCTTTAC AGTTCCAACA 75500 .......... .......... .......... .......... .......... .......... 513 AGTCACGTTT GATCTTCAGG GATTTTTCTC GATTCTTTGA TTTTGATCGA CCATGTTGAT 75560 .......... .......... .......... .......... .......... .......... 513 TTTGGCCTTT CGTCTTACTT CTCCCCCTTC GATCAACGCT GAGAGCACTG CCCAATGAAT 75620 .......... .......... .......... .......... .......... .......... 513 TTCCCACTTC TCATTTGTGA ATACTTTCGC TAAGAACAAC ATCATGGATT TTATCAAACT 75680 .......... .......... .......... .......... .......... .......... 513 TCAGTTTCTC AGATCCACGG GAACTGCGAA TCGCAGCAAC AATAGTATCC CAAGACTCGG 75740 .......... .......... .......... .......... .......... .......... 513 GCAGAGATGA CAACAAAATC AACGCCTTAA TTTCATCTTC GAAATTGATA TCCACAGAAT 75800 .......... .......... .......... .......... .......... .......... 513 TGAGTTGACT CACAATCATA TTAAACTCGT TTATATGATC AGAAACAGAT CCATTCTCAT 75860 .......... .......... .......... .......... .......... .......... 513 ACATCTGTAA ATTGAACAAT CTACGCATCA AATATACCTT GTTCATAGCC GATGGTTTTT 75920 .......... .......... .......... .......... .......... .......... 513 CATACATGTT TGACAGTTCC TTCAACAGAC CGAACGTCTT CACAATGTTG AACGCCACGT 75980 .......... .......... .......... .......... .......... .......... 513 TTCTTGACAA AGTCAACCGG ATCAACCCTA GAGCCTGGCG ATCCTTGAGT TTCCACTTCT 76040 .......... .......... .......... .......... .......... .......... 513 CCTCCGTCAT GGATTCCGGT TTCACCCTGG TCAACGGTTT ATGAAGATCT TTCTGGTACA 76100 .......... .......... .......... .......... .......... .......... 513 GATAATCTTT GATCTGCATC TTCCAGAAAC TAAAATCGGA TCCATCAAAC TTCTCGATTC 76160 .......... .......... .......... .......... .......... .......... 513 CAAGCTTCAA ACTATCCATC TTCAGTGATC GTGTTGTATC TCCTTATCTC TGATGCCAGT 76220 .......... .......... .......... .......... .......... .......... 513 TGTTAGGATC GAATTAAAGC ACACACACTA GATGAATGAA AACACAAGAA CTTTTAAAAG 76280 .......... .......... .......... .......... .......... .......... 513 AAAGAGATGA GAGATCTAGA AAGAGAAAAC CCAATATTTT GTGGTAACAC CCCGTGAGTA 76340 .......... .......... .......... .......... .......... .......... 513 AACTTCCACG GTCGTGAGGT ATATTTATAT TAATAAATCA GAGTTTTTTT GGTTACAGAG 76400 .......... .......... .......... .......... .......... .......... 513 AATAAATAGA GAATAAATAG GAAAGCCTAA AATTTAGGTC GGGTCGCTGC CCTGAACCCC 76460 .......... .......... .......... .......... .......... .......... 513 TCCTTCGGAT GGGGGGCTCC CACCCCCATA ACCCCCGGTA ACCTCACCGC GGAAATTGCG 76520 .......... .......... .......... .......... .......... .......... 513 TAAAGAGTTA TATATATTAA TCAGGCTCCA CTACTTAACA TAAACAAGAT AGTACCTCTG 76580 .......... .......... .......... .......... .......... .......... 513 GATTAGTTAT CCAGAATTGT GACATCAAGC CTCAGGCAGG GTTCCCTAGC ACCATTAAAA 76640 .......... .......... .......... .......... .......... .......... 513 GCCTATATTG GACGTCCATG GAAGGAGTAT TCCAAGACCA TCATAATGCA ATCAAACATT 76700 .......... .......... .......... .......... .......... .......... 513 GATGCATTCA TCGATCCATC AGGATGGTCA CCATGGAACA CAACTAATTT TGGAAAACAC 76760 .......... .......... .......... .......... .......... .......... 513 ACATGTTTTA TGCAGAGTAT CAGAACAGAG AACCAGGTGC TGCACTTGAC AAAAAAATCT 76820 .......... .......... .......... .......... .......... .......... 513 CAACATGGAG AGGTTACCAA AAGGGAATTT CAGGAGACAC TATTAACCAA TTCATTGACG 76880 .......... .......... .......... .......... .......... .......... 513 GCAATTTCAT CAACACAAGA GACCCTTGGC TACCCAAGAG TGATATTCCC TTTGAGCCTG 76940 .......... .......... .......... .......... .......... .......... 513 GCATTATGAA GGTCTAATTA ACCTATATCA TTTATTTCCA TACAAGGACT ATTTTGTTTT 77000 .......... .......... .......... .......... .......... .......... 513 AGATAATTAA TATATTTTTG CTCCTTTCTT TAGACATCTT ATATTCACAC AATATTAAGA 77060 .......... .......... .......... .......... .......... .......... 513 TGATAATAAT ATGTTTTTTC TATCCACCTA TATATGACTC CACATGAAAT ACAACCATTT 77120 .......... .......... .......... .......... .......... .......... 513 TTCTTTGTAT CAAATCAACA TTGTACGAAA TGAAATTTAA AAAAACAGTA AAAGTATTAA 77180 .......... .......... .......... .......... .......... .......... 513 GATCAGGCCA AGTTACTGAA AAAAAAGGTA GCAAGAAATT GATTGGGAGA AAATTCTCTT 77240 .......... .......... .......... .......... .......... .......... 513 TTCTGTATGT TTGACATCAT TGTGCAGATG CATATATATA CAACTACGAA ATACGTGAAC 77300 .......... .......... .......... .......... .......... .......... 513 AACAAACTGA GTAAAGATAA TTGAGAACAT GACTGACCAA CAATAAAACC TGTCTTACTT 77360 .......... .......... .......... .......... .......... .......... 513 AATCTAACAA ACTAAGTGTC CTACTTTGTT TAAAAAATTA AAAGATAATT AATTACAAGG 77420 .......... .......... .......... .......... .......... .......... 513 AATAATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 77480 .......... .......... .......... .......... .......... .......... 513 ATGACTAATC TTCATAAACT TAGTGAACCT CTGTCTTTAT AACTGTTTCA CCATTATCTA 77540 .......... .......... .......... .......... .......... .......... 513 CACCACCACC TCCCCCCTTA AGTTGGAGGG CGAGGAAAAC ACACCCAACT TGCCAGAAAG 77600 .......... .......... .......... .......... .......... .......... 513 GTTATTGTGA AGAGTCTCTG TTAAGGGCTT GGTGAATAAA TCGGCTAATT GAGACGAAGA 77660 .......... .......... .......... .......... .......... .......... 513 TGGAGTGAAT GAGACTGAAA TTAAACCAGC AATGAAAGTA TTTAAACAAC ATTTAGTACA 77720 .......... .......... .......... .......... .......... .......... 513 AGATTTGTGT ACTTCTTATT GTTGCAGCGG AATAAAAATT CACGAATTGA ATGATTTTCT 77780 .......... .......... .......... .......... .......... .......... 513 CCAAATCCTT CTTTGAATCA CTAGGAAACA AAGATAGTTT CACAAACTAA ATGTCTTATT 77840 .......... .......... .......... .......... .......... .......... 513 GTGGTTTAGT CTAAACTTTA GAGTTGTTTA TTGGTATTTT TTGTGTTTTT TTTCACTTTC 77900 .......... .......... .......... .......... .......... .......... 513 TGAACCGTTA ATCAAAAGAA AAAGCCAAAA AGAATTTAAT TTAAAAAAGG TAATTATTAA 77960 .......... .......... .......... .......... .......... .......... 513 CGTTGGAATA GTTACATGTG ACTGTTCCCA CCCCTTTTTT AAATTAATAC TTATCTTTTT 78020 .......... .......... .......... .......... .......... .......... 513 CTCTTTTCTT TCTATTAAAA GAAATTTTGG GTTTGTTCGG GTCGGGTCAA TCCACATGGG 78080 .......... .......... .......... .......... .......... .......... 513 CGACCCAAAT ACAAAACTTA CATCTCCCAC TTTGCACATG GTAGACAAGA CCCAAGCCAA 78140 .......... .......... .......... .......... .......... .......... 513 CATTACATCA GCTAAACACA ATTCATATGA CAAATAGTTC ATGCGATCTG TGAGCATCAA 78200 .......... .......... .......... .......... .......... .......... 513 GAGCTTACCT TTAAGGTTTT ACAAGCCCTA CATAGGAATT CAATCACATA TGGAAAGAAT 78260 .......... .......... .......... .......... .......... .......... 513 TCATCATCTT AAAGAGGTTA ACTCGAGTTC ATGTTTAACT TTATACACAC AATTACACTT 78320 .......... .......... .......... .......... .......... .......... 513 AATGCCAATA TGGTTAGTGT AATAGCCGGC TTGTGTATAT AAGTTTATTA TTCATTTAAT 78380 .......... .......... .......... .......... .......... .......... 513 GTATTTCCTT TCTACTTGAA TTTATCCTAT TCAACTGCTT TCCTAGACAT GCACTGCATT 78440 .......... .......... .......... .......... .......... .......... 513 GTCAAATCAT TCATAACTAC TAGTAACATG CTAAAGCAGC AACATCGATT GAAACTTTAG 78500 .......... .......... .......... .......... .......... .......... 513 AAAATAGCAA AAGGTCAAAG GGTATTTCAT TGAAAATTTA TTTTAATTTT TTTGGGTCTC 78560 .......... .......... .......... .......... .......... .......... 513 ACACAATAAA GAAGCAGGGA ATATTCTTTC ATTGACCCGT TGATCGCTAG ACACACGTGG 78620 .......... .......... .......... .......... .......... .......... 513 TATGAAACAC GTGCTACAAT ATTTTTACCT TATACTGGTG TATGTGTCTC ATCATCCAAA 78680 .......... .......... .......... .......... .......... .......... 513 TTATCCAACA TCGTATAGAT CTCGGTTTAA ACACCTCAAG ATGCTTAACC CTAGTTTCTC 78740 .......... .......... .......... .......... .......... .......... 513 TTTTCGAGGT ATCTTTAAAC GCACTTTCTT AGAGAAACAT TTGTCATAAA ACAAGTCTTA 78800 .......... .......... .......... .......... .......... .......... 513 ATATGGTGGT GAAATTCATC TTTTCACGTT CTTCGACGTA AGAGGTGATT GCTCGTGTGA 78860 .......... .......... .......... .......... .......... .......... 513 GAGAGTCAAT CATGCGACTT GTTTGACACA CTTTATTTTT TTAAAAAATA AATATCACAT 78920 .......... .......... .......... .......... .......... .......... 513 GCATACTACA TTTGAACATA AATTTAATTG TTTTATATAT AGAGGAGAAT ATTATAACAA 78980 .......... .......... .......... .......... .......... .......... 513 TAAATGATTT TACAATACTG AAATATCATC ATACTTTACG TAAACCTAGA GCCTTAACAT 79040 .......... .......... .......... .......... .......... .......... 513 GATTTTCAAA CAAGTCTCTA GAGATGGCCT TCATAAAAAG ATCTGCTATC ATTTCACGTG 79100 .......... .......... .......... .......... .......... .......... 513 TAGGAATGTA TTGTAAAGTT ATTTCTCCAT TTATGTCTTT CACAAAATTA TACTTGATGT 79160 .......... .......... .......... .......... .......... .......... 513 CGATGTGTTT GGTTTTTGTA TGATACTCAA GATCCTTTGT GTATGCGGTA ACCGCTTGAC 79220 .......... .......... .......... .......... .......... .......... 513 TATCACAATA TAGAATCATG GGACCCTTCA AATTCTTTGC AATACTAAAA TGTTCAAAGA 79280 .......... .......... .......... .......... .......... .......... 513 ATCTCTTTAA CCAAACAACT TCTTGTACTG CAGACACACA AACCAAAAAT TCAAATTCCA 79340 ||| || | |||| | ||| || || .......... .......... .......... ...ACAGACT CATCAAATA- TCACATCACA 539 TTGTCGAAAG AGCT 79354 |||| | | | || ATGTCTCAGG ATCT 553 hqPGS_C01HBa0163B20.1+_SGN-U345337+ (74361 74736) ******************************************************************************** EST sequence 39 -strand 638 n (File: SGN-U323900-) 1 TTTTTTTTTT GACATCAAAA TCAACGCCTT AATTTCATCT TCGAAATTAA TATCCACAGA 61 ATTGAGTTGA CTCACAATCA TATTGAACTC GTTTATATGA TCAGAAACGT ATCCAGTTTC 121 AAACATCTGT AAATTGAACA ATCTACGCAT CAAATATACT TTGTTCATAG CCGATGGTTT 181 TTCATACATA TTTGATAGTG CCTTCAACAG ACCGGACGTA GTCTTCTTCT TCACGATGTT 241 GAACGCCATG TTTCTTGACA AAGTGAACCG GATCAACCCT AGAGCCTGGC GATCCTTGAG 301 TTTCCACTTC TCCTCAGTCA TGGATTTCGT CTTCACCCCG GTCAACGGCT CGTGAAAATC 361 TTTCTGGTAC AGATAATCTT CGATCTGCAT CTTCCAGAAA CTGAAATTGA ATCCATCAAA 421 CTTCTCGATT CCAAGCTTCG AACTATCCAT CTTCTGTGAT CGTGTTGAAT CTCCTTAGCT 481 CTGATACCAT TTGTTAGGAT CGAATTCACG CACACACACT AGATGAATAA AGAACACAAG 541 AACTTTCAAG AGAAAGAGAA AACTCAATAT TTCGTGGTAA CTGTTTACAT CCCTACTCTG 601 TAAAAATAGG GCGAAACGTC GCGGCAACTC AAAAATTA Predicted gene structure (within gDNA segment 74994 to 77957): Exon 1 75748 76286 ( 539 n); cDNA 10 558 ( 549 n); score: 0.879 MATCH C01HBa0163B20.1+ SGN-U323900- 0.879 539 0.845 C PGS_C01HBa0163B20.1+_SGN-U323900- (75748 76286) Alignment (genomic DNA sequence = upper lines): TGACAACAAA ATCAACGCCT TAATTTCATC TTCGAAATTG ATATCCACAG AATTGAGTTG 75807 ||||| |||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGACATCAAA ATCAACGCCT TAATTTCATC TTCGAAATTA ATATCCACAG AATTGAGTTG 69 ACTCACAATC ATATTAAACT CGTTTATATG ATCAGAAACA GATCCATTCT CATACATCTG 75867 |||||||||| ||||| |||| |||||||||| ||||||||| ||||| | | || ||||||| ACTCACAATC ATATTGAACT CGTTTATATG ATCAGAAACG TATCCAGTTT CAAACATCTG 129 TAAATTGAAC AATCTACGCA TCAAATATAC CTTGTTCATA GCCGATGGTT TTTCATACAT 75927 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TAAATTGAAC AATCTACGCA TCAAATATAC TTTGTTCATA GCCGATGGTT TTTCATACAT 189 GTTTGACAGT TCCTTCAACA GACC-GA--- A-----CGTC TTCACAATGT TGAACGCCAC 75978 ||||| ||| ||||||||| |||| || | | || ||||| |||| ||||||||| ATTTGATAGT GCCTTCAACA GACCGGACGT AGTCTTCTTC TTCACGATGT TGAACGCCAT 249 GTTTCTTGAC AAAGTCAACC GGATCAACCC TAGAGCCTGG CGATCCTTGA GTTTCCACTT 76038 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTTGAC AAAGTGAACC GGATCAACCC TAGAGCCTGG CGATCCTTGA GTTTCCACTT 309 CTCCTCCGTC ATGGATTCCG GTTTCACCCT GGTCAACGGT TTATGAAGAT CTTTCTGGTA 76098 |||||| ||| ||||||| || ||||||| ||||||||| | |||| || |||||||||| CTCCTCAGTC ATGGATTTCG TCTTCACCCC GGTCAACGGC TCGTGAAAAT CTTTCTGGTA 369 CAGATAATCT TTGATCTGCA TCTTCCAGAA ACTAAAATCG GATCCATCAA ACTTCTCGAT 76158 |||||||||| | |||||||| |||||||||| ||| |||| | ||||||||| |||||||||| CAGATAATCT TCGATCTGCA TCTTCCAGAA ACTGAAATTG AATCCATCAA ACTTCTCGAT 429 TCCAAGCTTC AAACTATCCA TCTTCAGTGA TCGTGTTGTA TCTCCTTATC TCTGATGCCA 76218 |||||||||| ||||||||| ||||| |||| |||||||| | |||||||| | |||||| ||| TCCAAGCTTC GAACTATCCA TCTTCTGTGA TCGTGTTGAA TCTCCTTAGC TCTGATACCA 489 GTTGTTAGGA TCGAATTAAA GCACACACAC TAGATGAATG AA-AACACAA GAACTTTTAA 76277 ||||||||| ||||||| | |||||||||| ||||||||| || ||||||| ||||||| || TTTGTTAGGA TCGAATTCAC GCACACACAC TAGATGAATA AAGAACACAA GAACTTTCAA 549 AAGAAAGAG 76286 |||||||| GAGAAAGAG 558 hqPGS_C01HBa0163B20.1+_SGN-U323900- (75748 76286) ******************************************************************************** EST sequence 51 -strand 833 n (File: SGN-U329056-) 1 AATAGGAAGG AAACACTAGT GGAACATGAT CCACTACATC AACTCTAAAA CTAAGCTAGA 61 ATATAAAACA ACAGCATCCT CGAAATCATG AGGACCTACC AAAGCCGGTT GAATGCTAAA 121 CGTCCGAATA ACTGCAGCGA AGATCCTTTA GTTCATTCGT CCAGTTGTGG TTGCACCTAA 181 AATAGTAGAG TTTGTATAGG GTTAGTACAC ACTTGTACTA AGTATGGGTA TATGCAAGCA 241 CACACCAATG ACATGCATAA GAAAGAATAA TTCTTTCCTA ACAACATGGT TTTTGGAAGT 301 CAAGTTAGTG GACCTGCCAA TTTGTGATTA CGAAGGTTTC CAAATATGGA TTAGGAAAGT 361 CAGTGAGCTT TCTAGATTTA GAATAGGAAA GTTATGCCAT GAGAATAACG TACATCATCA 421 GTTTTTAACA TTTCCACATA GCACATAACA TTTACACATA GCACATATGA TATGGCATAA 481 AATACAATTT GCATGTAGCA CATCACTTCT TTAATATCAT TTATCATATG CCATGAGACC 541 TTTGAATCAT GGACTTAACA TTAAGAATTC CCAGAAATGA GGGCTCAACA AATGGGACCT 601 CAACTAGGGA GTCTTCATTA GCAAACACAT AGCCTGCTTC TTTCATTCAT ACGTACTACA 661 TTTCATTTCA TTCATAGGCC AGTGTAAACA CAAACTATAC CTAGGATGTA GTTTGAGACT 721 TTCATTAGGT TCATTGTGCA ATGACTAAGA ATGACCTAAT GTCATTACTT GAATCTAACT 781 CACCTTGTGA TTATCCTATC CAAACAACTT TGATATCATT CATTTCATTA TGT Predicted gene structure (within gDNA segment 74528 to 82807): Exon 1 80349 81134 ( 786 n); cDNA 1 831 ( 831 n); score: 0.658 MATCH C01HBa0163B20.1+ SGN-U329056- 0.658 786 0.944 C PGS_C01HBa0163B20.1+_SGN-U329056- (80349 81134) Alignment (genomic DNA sequence = upper lines): AACAGGAAAG AAACGCTAGT GGAACATGCT TCGCTAGCTC AATTCAAAAA CTACGCAAGA 80408 || ||||| | |||| ||||| |||||||| | | ||| || || || |||| ||| || ||| AATAGGAAGG AAACACTAGT GGAACATGAT CCACTACATC AACTCTAAAA CTAAGCTAGA 60 ATGTAATACA GTAGCATCCT CAAAAGCACG AGGACCTACC AAACTCCGAA TGAATGCTG- 80467 || ||| ||| |||||||| | ||| || | |||||||||| ||| ||| |||||||| ATATAAAACA ACAGCATCCT CGAAATCATG AGGACCTACC AAA-GCCGGT TGAATGCTAA 119 ACGTCCGGAT AGCAGCAACA ACGAACCTAT AGCTC-TACG CCCACCTGTG CCTGCACCT- 80525 ||||||| || | | ||| | | || ||| | || || | || ||| |||| ||||||| ACGTCCGAAT AACTGCAGCG AAGATCCTTT AGTTCATTCG TCCAGTTGTG GTTGCACCTA 179 AAA-AGTAGA -TATTTGTAT GG-AACTA-A CACTTGTACT AAGTATGCGT ATCTTCAAGA 80581 ||| |||||| | | | || || | || | |||||||||| ||||||| || || | |||| AAATAGTAGA GTTTGTATAG GGTTAGTACA CACTTGTACT AAGTATGGGT ATATGCAAGC 239 ACACACCAAG CACATGCATA ACAAGGAATA ACTCTTTCCT AAAAACATGA TTTATGGAAG 80641 ||||||||| ||||||||| | || ||||| | |||||||| || |||||| ||| ||||| ACACACCAAT GACATGCATA AGAAAGAATA ATTCTTTCCT AACAACATGG TTTTTGGAA- 298 GTTAAGTCAG TGGACATGCT AA------AT T--G-AGG-T TACGAA-A-- G-TTA-G--- 80683 || |||| || ||||| ||| || || | | ||| | | | || | | ||| | GTCAAGTTAG TGGACCTGCC AATTTGTGAT TACGAAGGTT TCCAAATATG GATTAGGAAA 358 -----TGAAC TTTCCAAATT GAG-TTAGGA AGGTTATGCC ATGAGAGTAA CATGCATCAT 80737 ||| | |||| | ||| || ||||| | |||||||| |||||| ||| | | |||||| GTCAGTGAGC TTTCTAGATT TAGAATAGGA AAGTTATGCC ATGAGAATAA CGTACATCAT 418 TA-TAATAAT CGTATTGCAC ACAACACATA ACATCT--TT ATA-CA--TA TCATA--GCA 80789 | | | | | | || ||| | | |||||| |||| | ||| || || | ||| ||| CAGTTTTTAA CAT-TTCCAC ATAGCACATA ACATTTACAC ATAGCACATA TGATATGGCA 477 -CATA-AC-A --T--ATA-A -CACATAACT TCTTTCATAT TATTCATTCA TATGTCATGA 80840 | | || | | || | ||||| ||| ||||| |||| ||| | ||| |||| ||||| TAAAATACAA TTTGCATGTA GCACATCACT TCTTTAATAT CATTTA-TCA TATGCCATGA 536 GACCTTGTCA TCATGGACTT GGTATTTAGA CGTTTCA-AA ATGAGGGCTC AACATATGTG 80899 |||||| | |||||||||| ||| ||| | || || |||||||||| |||| ||| | GACCTTTGAA TCATGGACTT AACATTAAGA ATTCCCAGAA ATGAGGGCTC AACAAATGGG 596 ACCTAAACTA GGGAGTCTTC ATTAGAAAAC ATAGAGTCTG CTTCATCCAT TCATACATAC 80959 |||| ||||| |||||||||| ||||| |||| | | || ||| |||| | ||| |||||| ||| ACCTCAACTA GGGAGTCTTC ATTAGCAAAC ACATAGCCTG CTTCTTTCAT TCATACGTAC 656 TTCATTTCAT TTCATTCATA GGCCAGTGTG GACACCACCT ATACCTAGGA TGTAGTTTAA 81019 | |||||||| |||||||||| ||||||||| |||| | || |||||||||| |||||||| | TACATTTCAT TTCATTCATA GGCCAGTGTA AACACAAACT ATACCTAGGA TGTAGTTTGA 716 GACTCTCATT GGGTTTGCTG TGCAATGATC AGGAATAACC TAACGTCATT ACCTGAGTCT 81079 |||| ||||| |||| || |||||||| | |||| ||| ||| |||||| || ||| ||| GACTTTCATT AGGTTCATTG TGCAATGACT AAGAATGACC TAATGTCATT ACTTGAATCT 776 AGATCACCTC TTGATTATCA TATCCTAACA GCTTCGGTAT CATTAATTTC TTTAT 81134 | |||||| |||||||| ||||| |||| ||| | ||| |||| ||||| |||| AACTCACCTT GTGATTATCC TATCCAAACA ACTTTGATAT CATTCATTTC ATTAT 831 hqPGS_C01HBa0163B20.1+_SGN-U329056- (80349 81134) ******************************************************************************** EST sequence 33 +strand 911 n (File: SGN-U330716+) 1 TTTCTTTTTT AATTTATTTC TTAACTTTCT CACCTATCCA AGAGGCTGTG GGTTCAATCC 61 CCACTCTCCA CATTTATTTT TCTCCTTTAT TTTTCTCCTA ACTCCCCCAT CCATTCAAGA 121 GGTTGTGGGT TCAATCCACT CTCCACATTT TATTTTGCTC TTTTATTTTC ATCCTAACTC 181 TCTCATCCAT TCAAGAGGTT GTGGGTTCAA TCCGAACTCT CCACATTTTA TTTTCTCCTT 241 TATGTTTCCC CTAACTATCT CATCCATTCA AGAGGTTGTG GGTTCAATCC CCACTCTCCA 301 CGTTTTATTT TCTCCTTTAT GTTTCTCCTA ACTCTCTCAT CCATTCAAGA AGTTGTGGGT 361 TCAACCCCCA CTCTCCACAT TTCATTTTTT TACTTTTTTA TTTTCATGGT TTTTAAACAT 421 GGTGAGGTCA CGGGTTCAAT CCTCCATGAC CTCACTTGTT TTAATTTATT TTTTTTCAAC 481 ATTTTGAACC CTCTTTGCTG ACCGAAATTC ATCAATAGAA GCTAAAAATT TTCTTTTAAT 541 TTTTCAGCAT CCTTTCATCA AGTTACACCT TAGTTCTTAG GGGAATTTCG TAGTGCATTT 601 ATAACCATAT AGGTGCGTCT TTATGTATTC GTTTAGCTAA GACATTATCC CTGAAATCAG 661 CCACATTTCA ACTCATATGA ACATCACATT TATATTAACA TGTGTACATG AAATATAAAG 721 AACTATCATG CCATTTGAAG TCCTAAACCA TGAACAATAG CCATGGCAAC AGACACATAC 781 ATACGTAGTT ACATTTTCGG AAACATCTTC ATTGTTCTCA AGTCAGATTC AACATTCTGA 841 TTTTCTTCAA AAAAAAAAAA AAAAAAAAAA AAANNNNNNN NNNNNANAAA AAAAAAAAAA 901 AAAAAAAAAA A Predicted gene structure (within gDNA segment 79847 to 85819): Exon 1 81825 81834 ( 10 n); cDNA 263 272 ( 10 n); score: 0.800 Intron 1 81835 82630 ( 796 n); Pd: 0.119 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 82631 83181 ( 551 n); cDNA 273 817 ( 545 n); score: 0.860 PPA cDNA 861 874 MATCH C01HBa0163B20.1+ SGN-U330716+ 0.860 561 0.616 C PGS_C01HBa0163B20.1+_SGN-U330716+ (81825 81834,82631 83181) Alignment (genomic DNA sequence = upper lines): TCCATTCAGT GTATCTTACA CTCGTACTTA ACCCTCCTAA GGTTCATCAT TTAATTACGT 81884 |||||||| TCCATTCAAG .......... .......... .......... .......... .......... 272 ACATCTTAGG TTCACTTATT TTTGAACGTA TGTTAGACTC ATGTGTCTAT ACATAAAAGC 81944 .......... .......... .......... .......... .......... .......... 272 CATGGGGCTT CATTCATAGT TCGCTAAGTG ATTCTTACTT TCATAAGATT ATGTATTACA 82004 .......... .......... .......... .......... .......... .......... 272 AGACTTATGT ATCTTGTATA TATGACAAGA TCTTGATTTT TGATCTAAGT AGATGGCATT 82064 .......... .......... .......... .......... .......... .......... 272 ACTCTTGGAT ATTTTACTCA CGTATGACTT ATGTATCAAT ATGGAAGTTT GGGCACGAGA 82124 .......... .......... .......... .......... .......... .......... 272 ACCCAAGTCT TGAATCACTT GGATATCATT TATATTTTTC ATCAATTTTA TTTCTAATAT 82184 .......... .......... .......... .......... .......... .......... 272 TCATAACATT ATACTCTAAA TTAAATCTCA ACATTTATAT CGAAGGATTA ATTTTCTATT 82244 .......... .......... .......... .......... .......... .......... 272 TTAATTAGAA TTCTAAATTA AATCTCAACA TTTACATGAG AGGATTAATT TTCTATTTTA 82304 .......... .......... .......... .......... .......... .......... 272 ATTAGAATTT TAAATTAAAT CTCAATATTT ACATGAAAGG ATTAATTTTA TATTTTAATT 82364 .......... .......... .......... .......... .......... .......... 272 AGAATTCTAA ATTAAATCTC AACATTTACA TGAAAGGATT AATCTTCTAT TTTAATCAGA 82424 .......... .......... .......... .......... .......... .......... 272 ATTTTAAATT AAATCTCAAC ATTTACATGA AGGTATTAAT TTTTCTATCT TAATTTTACT 82484 .......... .......... .......... .......... .......... .......... 272 CTTAGTTAAC CGAAGGGTTG GGGGTTCGAG CACCCACAAC CCCTTTGATT TTTTTGAGTT 82544 .......... .......... .......... .......... .......... .......... 272 AAATTCAATA CAATAGGGAG GTTATGGGTT CGAACCCCCA CAGCCCCCCT TATTTTTTTT 82604 .......... .......... .......... .......... .......... .......... 272 TAAATTTCGC CGAGGAGGTG GCTGTGAGGT AGTGGGTTTG ATGCCCACTC TTCACATTTT 82664 |||| ||||||| || ||||||| | ||| |||| .......... .......... ......AGGT TGTGGGTTCA ATCCCCACTC TCCACGTTTT 306 ATTTTCTCCT TTATTTTCCT CCTAACTCTC TCATCCATTC AAGAGGTTGT GGGTTTGATC 82724 |||||||||| |||| || || |||||||||| |||||||||| |||| ||||| ||||| | | ATTTTCTCCT TTATGTTTCT CCTAACTCTC TCATCCATTC AAGAAGTTGT GGGTTCAACC 366 CCCACTTTCC ACATTTTA-- TTTTTACTTC TTTATTTTCG TGATTTTT-A ACATGTTGAG 82781 |||||| ||| |||||| | ||||||||| ||||||||| || ||||| | ||||| |||| CCCACTCTCC ACATTTCATT TTTTTACTTT TTTATTTTCA TGGTTTTTAA ACATGGTGAG 426 GTAACGGGTT CAATCCTCCA TTACCTCACT TGTTTTAATT TATTTTTTTT CAATATTTTG 82841 || ||||||| |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| GTCACGGGTT CAATCCTCCA TGACCTCACT TGTTTTAATT TATTTTTTTT CAACATTTTG 486 AACCCTCTTT GCTGACAAAA ATTCATCAAT AGAAACTGGA AATTTTCTTT TAATTTTTCA 82901 |||||||||| |||||| || |||||||||| |||| || | |||||||||| |||||||||| AACCCTCTTT GCTGACCGAA ATTCATCAAT AGAAGCTAAA AATTTTCTTT TAATTTTTCA 546 GCATCCTTTT ATCAAGTTAC ACCTTGGTTC ATAGGGGAAT TTTGTAGTGC ATTTAGAACG 82961 ||||||||| |||||||||| ||||| |||| ||||||||| || ||||||| ||||| ||| GCATCCTTTC ATCAAGTTAC ACCTTAGTTC TTAGGGGAAT TTCGTAGTGC ATTTATAACC 606 TTTTAGGTGT GTCTTCATGT ATTCATTTAG CCAAGATATT ATCCCTCAAA TCAGCCACAT 83021 | |||||| ||||| |||| |||| ||||| | |||| ||| |||||| ||| |||||||||| ATATAGGTGC GTCTTTATGT ATTCGTTTAG CTAAGACATT ATCCCTGAAA TCAGCCACAT 666 TTCAACT-AT ATAAACATCA CATTTATATC AACATGTGTA TACATGTGTA GATGAAATAT 83080 ||||||| || || ||||||| || || ||| | | || ||||||||| ||||||||| TTCAACTCAT ATGAACATCA CA-TT-TAT- ---A--T-TA -ACATGTGTA CATGAAATAT 716 ATAGAACTAT CATGCCATTT CAACTCCTAA ACCATGAACA ATACCCACGA CAATAGACAC 83140 | |||||||| |||||||||| || |||||| |||||||||| ||| ||| | ||| |||||| AAAGAACTAT CATGCCATTT GAAGTCCTAA ACCATGAACA ATAGCCATGG CAACAGACAC 776 ATACACACGT AGTTACATTT TCAGAAATAT CAACATAAGT C 83181 ||||| |||| |||||||||| || |||| || | ||| | | ATACATACGT AGTTACATTT TCGGAAACAT CTTCATTGTT C 817 hqPGS_C01HBa0163B20.1+_SGN-U330716+ (82631 83181) ******************************************************************************** EST sequence 15 -strand 912 n (File: SGN-U345876-) 1 NAGGGGGGGC AGGTGGGGGG CCCCCATTCA GCCTTTTGGG GGGCATGTAT AGGACCATTT 61 TAATTTGATT CCAGAGGGTA CTGGGAAGCC CCATTGCCTT TGATTAAATT TTCGTATAAT 121 AATTACTATC CCTCCCAACA TTGGGATGGT ACCGCTTAGG GCACTGTATG GTAGAAGGTG 181 TAGATCTAGA TTTGGCTTGT TCGAGATTTG AGAGTCATCC TTGTTGGGGT CAAGAGATCA 241 TTCATGAGGC TTAGAAGAAG GTCAGAGTTA TTAGGGACAT GTTGGCTACT GCTTACAGCC 301 GACAGAAGTC ATATGTTGAT AACTGAAAAC GACCCTTAGA GTTTGATGTT GGTGAACAGG 361 TTGACTTGAA GATATCACCT ATGAAAGGGG TGATGATATT CTGTTCATCC AGTCTTTCAT 421 GTCTCTATGT AGAAGAAGTG CCTAGGTGAT CCATCATCAA TCCTACATGT TGAAGGTTTG 481 GGGGTCGGTG AATACTTCTC TTATGAGGAG GTACCTGTTG AGGTCTTAGA TAGACTGGTC 541 AAGCGGCTGA GGAACAAAGA GATTGTCATA GTGAAGTTAT TGTGGAGAAA TCATCTTTTT 601 GAGGGTGCTA CGTGGGAGGC TGAGGCCGGC TTGAGATTCC ACTACCCTTA TCTTTTCATC 661 TCTTGAAGTT AGACTTCATA CTTTTAAGCC TATGTTTCCT TATCTCTCTG TATTTTGTTG 721 CTATTGATTG ATTGTTCATA GTGATTTTAT TGTGATCTGA CCAACAGCAC GATTTGAAGT 781 TGTAGTTTCA TTCGGGGATG AATGTTCCAA AGGGGGGGGG GGGATAATGT AACAACCCTC 841 GTGCCGAATT CCTGCAGCCC GGGGGATCCA CTAGTTATAG AGCGGCCGCC ACCGCGGGGA 901 GCTCCAGCTT TA Predicted gene structure (within gDNA segment 88853 to 80594): Exon 1 84754 84368 ( 387 n); cDNA 7 398 ( 392 n); score: 0.743 Intron 1 84367 84264 ( 104 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.98) Exon 2 84263 83846 ( 418 n); cDNA 399 816 ( 418 n); score: 0.837 Intron 2 83845 81232 (2614 n); Pd: 0.000 (s: 0.78), Pa: 0.277 (s: 0) Exon 3 81231 81225 ( 7 n); cDNA 817 823 ( 7 n); score: 0.714 MATCH C01HBa0163B20.1- SGN-U345876- 0.792 812 0.890 C PGS_C01HBa0163B20.1-_SGN-U345876- (84754 84368,84263 83846,81231 81225) Alignment (genomic DNA sequence = upper lines): GGGCAGGCAA GGCG-CAGCA TGCATAC-AT TGGAGGACAT GTTGAGAGCG TGTGTAATTG 84697 ||||||| || | | || | || | | ||| || ||| || || | | ||||| GGGCAGGTGG GGGGCCCCCA TTCAGCCTTT TGGGGGGCAT GTATAGGACC ATTTTAATTT 66 GCTT-CAGAG GTAACTGGGA TGACCATCTG CCTTTAATAG AGTTATCGTA TAATAATAGC 84638 | || ||||| | ||||||| | || || ||||| || | || ||||| ||||||| | GATTCCAGAG GGTACTGGGA AGCCCCATTG CCTTTGATTA AATTTTCGTA TAATAATTAC 126 TATCACTCC- ATCATTGGGA TGGCACCTTT TGAGGCATTG TATGGTAGGA GGTGTAGATC 84579 |||| |||| | |||||||| ||| ||| | | |||| || |||||||| | |||||||||| TATCCCTCCC AACATTGGGA TGGTACCGCT TAGGGCACTG TATGGTAGAA GGTGTAGATC 186 TTCAGTTGGG TGGTTCGAGG TTGGAGAGTC ATCCAT-TTT AGGTCTGGAG ATAATTCATA 84520 | | |||| | ||||||| || ||||||| |||| | || |||| ||| || |||||| TAGATTTGGC TTGTTCGAGA TTTGAGAGTC ATCCTTGTTG GGGTCAAGAG ATCATTCATG 246 AAGACGTGGA GAAAGTTAGA GTGATTAGGG ACAAGTTGGC TACTGCTTAC AGCCGACAGA 84460 | | | | ||| || ||| || ||||||| ||| |||||| |||||||||| |||||||||| AGGCTTAGAA GAAGGTCAGA GTTATTAGGG ACATGTTGGC TACTGCTTAC AGCCGACAGA 306 AATCATATCC AGATAACAGA AAGTGGCCCT TAGAAATTAA TGTTTGTGAC CTGGCTTACT 84400 | |||||| |||||| || || | |||| |||| || | |||| |||| | || | ||| AGTCATATGT TGATAACTGA AAACGACCCT TAGAGTTTGA TGTTGGTGAA CAGGTTGACT 366 TGAAGATATC TCCTATGAAA GGGGTGATGA GATTTGGTAA AAAGGGGAAG CTGAGTCCGA 84340 |||||||||| ||||||||| |||||||||| | TGAAGATATC ACCTATGAAA GGGGTGATGA TA........ .......... .......... 398 GGTATGTGTG TTCATATGCG ATCCTACAGC GTGTGGGTGA GGTGGCCTAT TAGCTAGTAT 84280 .......... .......... .......... .......... .......... .......... 398 TGCCTGCGGA GCTAACTTCT GTTCATCCAG TCTTTCATGT CTCTATGTTG AAGAAGTGCC 84220 |||| |||||||||| |||||||||| |||||||| | |||||||||| .......... ......TTCT GTTCATCCAG TCTTTCATGT CTCTATGTAG AAGAAGTGCC 442 TAGGTGATCC AACATCAATG CTACCTATTG AAGGTTAGGG GGTTGGTGAA GACTTGTCTT 84160 |||||||||| | ||||||| |||| | ||| |||||| ||| ||| |||||| |||| |||| TAGGTGATCC ATCATCAATC CTACATGTTG AAGGTTTGGG GGTCGGTGAA TACTTCTCTT 502 ATGAGGATGT ACTTGTTGAG ATCTTAGACA GACAGGTCAA AAGGCTGAGG AACAAGAAGA 84100 ||||||| || || ||||||| ||||||| | ||| |||||| |||||||| ||||| ||| ATGAGGAGGT ACCTGTTGAG GTCTTAGATA GACTGGTCAA GCGGCTGAGG AACAAAGAGA 562 TTGCCACAGT GAATGTATTG TGGAGAAATC ATCTTGTTGA GGGTGCTATG TGGGAGGCTG 84040 ||| || ||| ||| ||||| |||||||||| ||||| |||| |||||||| | |||||||||| TTGTCATAGT GAAGTTATTG TGGAGAAATC ATCTTTTTGA GGGTGCTACG TGGGAGGCTG 622 AGGCCGACAT GAGATCCTGT TATCCTCATC TTTTCAGCTC TTGAGGTTAG ACTTCCTACT 83980 |||||| | | ||||| | || ||| ||| |||||| ||| |||| ||||| ||||| |||| AGGCCGGCTT GAGATTCCAC TACCCTTATC TTTTCATCTC TTGAAGTTAG ACTTCATACT 682 CGTAAGGCTA TAGTTACTTA TCTCTTGGTA TTTTGTTGCT ATTGGCAGAC TGTACATGGC 83920 |||| ||| | || |||| ||||| ||| |||||||||| |||| || ||| ||| | TTTAAGCCTA TGTTTCCTTA TCTCTCTGTA TTTTGTTGCT ATTGATTGAT TGTTCATAGT 742 GATTAAGTTA TGATCTGATT GACATTTTGA TGTGTAATAG TAGTGTCATT CGGGGACGAA 83860 |||| || |||||||| ||| || | || | | | |||| ||||| |||||| ||| GATTTTATTG TGATCTGACC AACAGCACGA TTTGAAGTTG TAGTTTCATT CGGGGATGAA 802 TGTTCCTAAG GGGGAGATAA TGTAACAATC CTAAAAAATC TAATAAATAG GTAATTAAGG 83800 |||||| ||| |||| TGTTCCAAAG GGGG...... .......... .......... .......... .......... 816 TGATTTAAAT ATTACTTCAA AATCTAAAAT TTTAAGGGCA TAATGGTTCT TTCACATATT 83740 .......... .......... .......... .......... .......... .......... 816 ATTTAAATAA ATCAGATTTT TATTAAGTTA ATAAATCCTA TTTTGACTAA GTCTTGAATT 83680 .......... .......... .......... .......... .......... .......... 816 TAGTCTCTTA ATGGCTAATC CTAATAACTC TCTCTATCTT ACGTTTCTCA ACTCTCTCTC 83620 .......... .......... .......... .......... .......... .......... 816 ACATTCTCCA TCTCTCTCTC ACGTTATTCT GCCAAACACA ACAAAAACCA GAGAATACAT 83560 .......... .......... .......... .......... .......... .......... 816 CAAGAGTTCT TCACACTTGA CTCGCATGAA ATTTTAAGAA AAACAAAGCA ACCAAAAACG 83500 .......... .......... .......... .......... .......... .......... 816 TTAAGGCTAA GAAAAGTTGT TCGTTGAGTG GTGTGGACGT TGAGGTAACT TGGACTGATT 83440 .......... .......... .......... .......... .......... .......... 816 TTTGGAGAGA GTTTTGGGCA GAAAATTCTT CGTTCAAACA TCAATAAAGG TGTGGGTTCT 83380 .......... .......... .......... .......... .......... .......... 816 CTTACCTCTT GGTACCTTTC CCAAGAGAAT CCTTAAGGTT CACAATATTC ATTCTGAAAA 83320 .......... .......... .......... .......... .......... .......... 816 CTAGGATTGT CCCCCGTTGC ATGTCCCTGC CACTAGCTCC CATTGAATCA TAGGTTGGTT 83260 .......... .......... .......... .......... .......... .......... 816 ATGTTTGCTG GTAGAAAACT AGGGATGAAA CGTGTTTTCA AAATGATTAT GTGTTTATAT 83200 .......... .......... .......... .......... .......... .......... 816 GTAGGTTTGG AATTATGTGA CTTATGTTGA TATTTCTGAA AATGTAACTA CGTGTGTATG 83140 .......... .......... .......... .......... .......... .......... 816 TGTCTATTGT CGTGGGTATT GTTCATGGTT TAGGAGTTGA AATGGCATGA TAGTTCTATA 83080 .......... .......... .......... .......... .......... .......... 816 TATTTCATCT ACACATGTAT ACACATGTTG ATATAAATGT GATGTTTATA TAGTTGAAAT 83020 .......... .......... .......... .......... .......... .......... 816 GTGGCTGATT TGAGGGATAA TATCTTGGCT AAATGAATAC ATGAAGACAC ACCTAAAACG 82960 .......... .......... .......... .......... .......... .......... 816 TTCTAAATGC ACTACAAAAT TCCCCTATGA ACCAAGGTGT AACTTGATAA AAGGATGCTG 82900 .......... .......... .......... .......... .......... .......... 816 AAAAATTAAA AGAAAATTTC CAGTTTCTAT TGATGAATTT TTGTCAGCAA AGAGGGTTCA 82840 .......... .......... .......... .......... .......... .......... 816 AAATATTGAA AAAAAATAAA TTAAAACAAG TGAGGTAATG GAGGATTGAA CCCGTTACCT 82780 .......... .......... .......... .......... .......... .......... 816 CAACATGTTA AAAATCACGA AAATAAAGAA GTAAAAATAA AATGTGGAAA GTGGGGATCA 82720 .......... .......... .......... .......... .......... .......... 816 AACCCACAAC CTCTTGAATG GATGAGAGAG TTAGGAGGAA AATAAAGGAG AAAATAAAAT 82660 .......... .......... .......... .......... .......... .......... 816 GTGAAGAGTG GGCATCAAAC CCACTACCTC ACAGCCACCT CCTCGGCGAA ATTTAAAAAA 82600 .......... .......... .......... .......... .......... .......... 816 AAATAAGGGG GGCTGTGGGG GTTCGAACCC ATAACCTCCC TATTGTATTG AATTTAACTC 82540 .......... .......... .......... .......... .......... .......... 816 AAAAAAATCA AAGGGGTTGT GGGTGCTCGA ACCCCCAACC CTTCGGTTAA CTAAGAGTAA 82480 .......... .......... .......... .......... .......... .......... 816 AATTAAGATA GAAAAATTAA TACCTTCATG TAAATGTTGA GATTTAATTT AAAATTCTGA 82420 .......... .......... .......... .......... .......... .......... 816 TTAAAATAGA AGATTAATCC TTTCATGTAA ATGTTGAGAT TTAATTTAGA ATTCTAATTA 82360 .......... .......... .......... .......... .......... .......... 816 AAATATAAAA TTAATCCTTT CATGTAAATA TTGAGATTTA ATTTAAAATT CTAATTAAAA 82300 .......... .......... .......... .......... .......... .......... 816 TAGAAAATTA ATCCTCTCAT GTAAATGTTG AGATTTAATT TAGAATTCTA ATTAAAATAG 82240 .......... .......... .......... .......... .......... .......... 816 AAAATTAATC CTTCGATATA AATGTTGAGA TTTAATTTAG AGTATAATGT TATGAATATT 82180 .......... .......... .......... .......... .......... .......... 816 AGAAATAAAA TTGATGAAAA ATATAAATGA TATCCAAGTG ATTCAAGACT TGGGTTCTCG 82120 .......... .......... .......... .......... .......... .......... 816 TGCCCAAACT TCCATATTGA TACATAAGTC ATACGTGAGT AAAATATCCA AGAGTAATGC 82060 .......... .......... .......... .......... .......... .......... 816 CATCTACTTA GATCAAAAAT CAAGATCTTG TCATATATAC AAGATACATA AGTCTTGTAA 82000 .......... .......... .......... .......... .......... .......... 816 TACATAATCT TATGAAAGTA AGAATCACTT AGCGAACTAT GAATGAAGCC CCATGGCTTT 81940 .......... .......... .......... .......... .......... .......... 816 TATGTATAGA CACATGAGTC TAACATACGT TCAAAAATAA GTGAACCTAA GATGTACGTA 81880 .......... .......... .......... .......... .......... .......... 816 ATTAAATGAT GAACCTTAGG AGGGTTAAGT ACGAGTGTAA GATACACTGA ATGGACAACT 81820 .......... .......... .......... .......... .......... .......... 816 GCATTGGCAT ATGATGAGAT GAACTATGAA ATGAAGAAAT GAATATTCAC GTAATAGGAG 81760 .......... .......... .......... .......... .......... .......... 816 GTGAGTTATT ATGAAAAGCA AGGGTTCTAA TAATGAAGAA TGTGGTGACA ACATGATATG 81700 .......... .......... .......... .......... .......... .......... 816 AGACTAATGT ATATGATGAG AGCAATCTCA AATGAGCCTA AGTAAATGTT ACCAATATGT 81640 .......... .......... .......... .......... .......... .......... 816 ACTCACCAAT GAGAGTGTAA GATAATGAAA AGACCAATAT CTATGAACAC ACTAATGAAA 81580 .......... .......... .......... .......... .......... .......... 816 GTATTGAGTT TAACACACTT AATACTAATG ATGAGATGAT AAATCATCCA ATGAGCTATG 81520 .......... .......... .......... .......... .......... .......... 816 TTGTCCTCAT ACTAGAAGTC AGCTTCCATG ACGTATGAGT TGAATATAAT GAAACTTTAT 81460 .......... .......... .......... .......... .......... .......... 816 ACTGAGCATC GATAGGCTAG CTATGTGCGG TGATGCCTTC TTTTGGGAAG GGCAAAGGTT 81400 .......... .......... .......... .......... .......... .......... 816 CAGGTAACTC TCATGAGATG AGACTGTCCG GCTTGCCGGG TATGTGTCTT CATACATCTC 81340 .......... .......... .......... .......... .......... .......... 816 CTAGTCTTTG AACCTATACT GCCAATATAG GGATCTAATG GGGTTGAATT CCCATATACG 81280 .......... .......... .......... .......... .......... .......... 816 CTAGCATGTT ATTGAGTCAC TTTGGCCGGT GATTCCACCT CTTTTCAGTG TGGGG 81225 | |||| .......... .......... .......... .......... ........GG GGGGG 823 hqPGS_C01HBa0163B20.1-_SGN-U345876- (84754 84368,84263 83846) ******************************************************************************** EST sequence 32 +strand 911 n (File: SGN-U330716+) 1 TTTCTTTTTT AATTTATTTC TTAACTTTCT CACCTATCCA AGAGGCTGTG GGTTCAATCC 61 CCACTCTCCA CATTTATTTT TCTCCTTTAT TTTTCTCCTA ACTCCCCCAT CCATTCAAGA 121 GGTTGTGGGT TCAATCCACT CTCCACATTT TATTTTGCTC TTTTATTTTC ATCCTAACTC 181 TCTCATCCAT TCAAGAGGTT GTGGGTTCAA TCCGAACTCT CCACATTTTA TTTTCTCCTT 241 TATGTTTCCC CTAACTATCT CATCCATTCA AGAGGTTGTG GGTTCAATCC CCACTCTCCA 301 CGTTTTATTT TCTCCTTTAT GTTTCTCCTA ACTCTCTCAT CCATTCAAGA AGTTGTGGGT 361 TCAACCCCCA CTCTCCACAT TTCATTTTTT TACTTTTTTA TTTTCATGGT TTTTAAACAT 421 GGTGAGGTCA CGGGTTCAAT CCTCCATGAC CTCACTTGTT TTAATTTATT TTTTTTCAAC 481 ATTTTGAACC CTCTTTGCTG ACCGAAATTC ATCAATAGAA GCTAAAAATT TTCTTTTAAT 541 TTTTCAGCAT CCTTTCATCA AGTTACACCT TAGTTCTTAG GGGAATTTCG TAGTGCATTT 601 ATAACCATAT AGGTGCGTCT TTATGTATTC GTTTAGCTAA GACATTATCC CTGAAATCAG 661 CCACATTTCA ACTCATATGA ACATCACATT TATATTAACA TGTGTACATG AAATATAAAG 721 AACTATCATG CCATTTGAAG TCCTAAACCA TGAACAATAG CCATGGCAAC AGACACATAC 781 ATACGTAGTT ACATTTTCGG AAACATCTTC ATTGTTCTCA AGTCAGATTC AACATTCTGA 841 TTTTCTTCAA AAAAAAAAAA AAAAAAAAAA AAANNNNNNN NNNNNANAAA AAAAAAAAAA 901 AAAAAAAAAA A Predicted gene structure (within gDNA segment 88203 to 94128): Exon 1 91369 91848 ( 480 n); cDNA 322 804 ( 483 n); score: 0.916 Intron 1 91849 92959 (1111 n); Pd: 0.000 (s: 0.94), Pa: 0.935 (s: 0) Exon 2 92960 92977 ( 18 n); cDNA 805 821 ( 17 n); score: 0.611 PPA cDNA 861 874 MATCH C01HBa0163B20.1+ SGN-U330716+ 0.916 498 0.547 C PGS_C01HBa0163B20.1+_SGN-U330716+ (91369 91848,92960 92977) Alignment (genomic DNA sequence = upper lines): TTCCTCCTTA CTCTCTCATC CATTCAAGAG GTTGTGGGTT CAATCCCCAC TTTCCACATT 91428 || ||||| | |||||||||| ||||||||| |||||||||| ||| |||||| | |||||||| TTTCTCCTAA CTCTCTCATC CATTCAAGAA GTTGTGGGTT CAACCCCCAC TCTCCACATT 381 TTA-TATTT- ACTTCTTTAT TTTCATGGTT TTT-AACATG GTGAAGTCAC GGGTTCAATC 91485 | | | ||| |||| ||||| |||||||||| ||| |||||| |||| ||||| |||||||||| TCATTTTTTT ACTTTTTTAT TTTCATGGTT TTTAAACATG GTGAGGTCAC GGGTTCAATC 441 CTGCATGACC TCACTTGTTT TAATGTAAAT TTTTTCAACA TTTTGAACCC TCTTTGCTGA 91545 || ||||||| |||||||||| |||| || | |||||||||| |||||||||| |||||||||| CTCCATGACC TCACTTGTTT TAATTTATTT TTTTTCAACA TTTTGAACCC TCTTTGCTGA 501 CCAAAATTCA TCAATAGAAG CTGGAAATTT TCTTTTAATT TTTCAGCATC CTTTCATCAA 91605 || ||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| CCGAAATTCA TCAATAGAAG CTAAAAATTT TCTTTTAATT TTTCAGCATC CTTTCATCAA 561 GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA GAACGTTTTA GGTGTGTCTT 91665 |||||||||| |||||||||| |||||||||| |||||||||| ||| | || |||| ||||| GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA TAACCATATA GGTGCGTCTT 621 CATGTATTCG TTTAGCCAAG ACATTATCCA TCAAATCAGC CACATTTCAA CTCATATGAA 91725 ||||||||| |||||| ||| ||||||||| | |||||||| |||||||||| |||||||||| TATGTATTCG TTTAGCTAAG ACATTATCCC TGAAATCAGC CACATTTCAA CTCATATGAA 681 CATCACATTT ACATCAACAT GTGTATATGA AATATAAAGA ACTATCATGC CATTTCAACT 91785 |||||||||| | || ||||| ||||| |||| |||||||||| |||||||||| ||||| || | CATCACATTT ATATTAACAT GTGTACATGA AATATAAAGA ACTATCATGC CATTTGAAGT 741 CCTAAACCAT GAACAATATC CACGGCAACA GACACATACA CACGTAGTTA CATTTTCGGA 91845 |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| |||||||||| CCTAAACCAT GAACAATAGC CATGGCAACA GACACATACA TACGTAGTTA CATTTTCGGA 801 AACGTCAACA TAAGTCACAT AATTTCAAAC ATACATATAA ACACATAATC ATCACAAAAA 91905 ||| AAC....... .......... .......... .......... .......... .......... 804 CACGTTTCAT CCCTAGTTTA CTACCAGCAA ACATAACCAA CCTATGATTC AATGGGAGCT 91965 .......... .......... .......... .......... .......... .......... 804 ACTGACTGGG ACATGCAACG GGGAACAATC CTAGTTTTCG GAATGAATAT TCTGAAACTT 92025 .......... .......... .......... .......... .......... .......... 804 AAGGGGTCTC TTGGGAATGG GACCAAGAGA GAAAATAACC CATACCTTTA TTGATGTTCA 92085 .......... .......... .......... .......... .......... .......... 804 AATAAAGAAT TTGCTGCCCA AAACTCTCTC CAGAAATCAG TCAGAGTTAC CTCAACTTCC 92145 .......... .......... .......... .......... .......... .......... 804 ACACCACTCA ACGAACAACT TCTCTTCGCC TTAACGCTTT TGGTTGCTTT GTTTTTCTGA 92205 .......... .......... .......... .......... .......... .......... 804 ATATTTCATG TGAGTTATTC AAGTGTGAAA AACTCTTGAT TTATTCTCTG TTTTTTGTTG 92265 .......... .......... .......... .......... .......... .......... 804 TGTTTGGCAG AATAATGTGT GAGAGAGATG GAGAACGTGA GAGAGAGTTA GTAGGATTAG 92325 .......... .......... .......... .......... .......... .......... 804 GAGACTAAAT TTAAGACTTA AAAAATACGA TTTAATTAAC TTAATAAAAA TCTGATTTAT 92385 .......... .......... .......... .......... .......... .......... 804 TTTAAATAAT ACGTGAAAGG ACAATTGTGC CCTTAAATTT TAGATTTTCA AATACTAATT 92445 .......... .......... .......... .......... .......... .......... 804 AAATCATCTT AAGTACCTAT TTATTCAATT TTTTAGGATT GTTACATTCC TTATGAAATC 92505 .......... .......... .......... .......... .......... .......... 804 TCAGATACAA TTGCCTTGAA GATTGCTTTA GGCCATAACT TGATCTTTTC AATTTACAAA 92565 .......... .......... .......... .......... .......... .......... 804 CTTTCTTTTC TTGACCTTTA ACAATGAAAC CAACTGGTTG TTCCATATAG ATTTCTTCGT 92625 .......... .......... .......... .......... .......... .......... 804 TTAATTTTAC ATTGATAAAA GCGATCTTCA CATCTGTTTG GTGTAATTCT GGATCTAAAC 92685 .......... .......... .......... .......... .......... .......... 804 GTGCAACGAT AGCTAAAAGT AATCGTATGG ACATAAACTT CACAACTGGT GAAAGAGTTT 92745 .......... .......... .......... .......... .......... .......... 804 CCTCATAGTC TATTCCTACT CCTTGAGTAA AACCTTTTGC AACCAATCGT GCTTTGTGTC 92805 .......... .......... .......... .......... .......... .......... 804 TTTCTATTGA CCAACCTGAT TTACGTTTAA CTTTAAGAAT CCATTTATTA CCAATATCTT 92865 .......... .......... .......... .......... .......... .......... 804 TACATTCCTT AGGAAGGTCA AATTGATCCC ATACTTTGTT GGATTTCACA CTCTAATTCT 92925 .......... .......... .......... .......... .......... .......... 804 TCTTTCATAC CTTTGAACCA TTCTTCCCTT TCAGGTTTTG ATAATGCCTC AA 92977 | || || | ||| || .......... .......... .......... ....ATCTTC ATTGT-TCTC AA 821 hqPGS_C01HBa0163B20.1+_SGN-U330716+ (91369 91848) ******************************************************************************** EST sequence 1 +strand 1903 n (File: SGN-U312517+) 1 ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 61 GTTGTTTCAT AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 121 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 181 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT 241 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 301 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 361 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 421 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 481 GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT 541 ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA 601 GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC 661 ACCACCCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC 721 ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC 781 AGTAACCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT 841 GGAGGCGGAC AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCCCAG GAGCAGTCCA 901 ACTCCTTTCG TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTGA AATCGAAAAG 961 AACATGCTAA ATGTTGTGCT TATTGGTGAA GGCCCAACCA AGACCATAAT CACCGGTGAC 1021 CAGGCAGTAG TTCCTAACCG TATATCAACA TGGCATACAG CCACCCTTGG TGTTTGTGGT 1081 GATGGTTTCG TTATGAAGGA CATGGGTATT GAAAACACAG CAGGACCCAC AAAAGAACAA 1141 GCCGTTGCAT TGAGAATTAA TGCCGATAGG GCTGTTCTCT ACAACTGCAA TATCGATGGT 1201 TACCAAGACA CGTTATACGC TCACTCAGGA AGACAATTTT ATCGTGATTG TACCATTACA 1261 GGCACCATTG ATTTCTTGTT TGGTGATGCA AGTGCTGTTT TCCAAAACTG CAAATTGATT 1321 GTGAGGAAAC CAGGTCCTAA TCAAGCTTGC ATGATCACTG CTCAAGGAAG GATGAGAAAA 1381 GATTCCTTTG GTACATTCGT TATCCAGAAT TGTGACATCA AGGCTGATCC AGCACTCACT 1441 AGCGCCAATC CACCAGTCAA AGTCTATCTT GGACGTCCAT GGAAGGAGTT TTCCAAGACC 1501 ATCATAATGC AATCAAACAT CGATGGATTC GTCGATCCAT CAGGATGGTC ACCATGGAAC 1561 ACAACTGATT TTGGAATACA CACATGTTTT TATGCAGAGT ATCAGAACAG AGGACCAGGT 1621 GCTGCACTTG ACAAAAGAGT CTCCACATGG AGAGGTTACC AAAAGGATAT TTCAGGAGAC 1681 GTTATTAACA GCTTCACTGC CGGTAAATTC ATTAATACAC AACAGCCATG GTTACCAGTG 1741 TTTGATATTC CCTATGAAGC TGGCATGATG AAGGTGTAAT TGCATATACC ATTCACCCTG 1801 TAATTTTTTC TAATTATTCA AAATTATATT TCCTAAAAAA AAAAAAAAAA AAAAAAAAAA 1861 AAAAAAATTG ACAAGTGCTG GAAAAGTGAA CCTTTCTGGG CTG Predicted gene structure (within gDNA segment 107456 to 111180): Exon 1 108056 109889 (1834 n); cDNA 1 1834 (1834 n); score: 0.989 PPA cDNA 1853 1868 MATCH C01HBa0163B20.1+ SGN-U312517+ 0.989 1834 0.964 C PGS_C01HBa0163B20.1+_SGN-U312517+ (108056 109889) Alignment (genomic DNA sequence = upper lines): ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 108115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAACACAG CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG 60 GTTGTTTCAT AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 108175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGTTTCAT AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 120 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 108235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 180 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 108295 |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT 240 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 108355 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 300 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 108415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 360 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 108475 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 420 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 108535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 480 GAGGAACTAA GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT 108595 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT 540 ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA 108655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA 600 GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC 108715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC 660 ACCACTCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC 108775 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCACCCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC 720 ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC 108835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC 780 AGTAATCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT 108895 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAACCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT 840 GGAGGCGGAC AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCCCAA GAGTAGTCCA 108955 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||| |||||| GGAGGCGGAC AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCCCAG GAGCAGTCCA 900 ACTCCTTTCG TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTCA AATCGAAAAG 109015 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| ACTCCTTTCG TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTGA AATCGAAAAG 960 AACATGCTAA ATGTTGTGCT TATTGGTGAA GGCCCAACCA AGACCATAAT CACCGGTGAC 109075 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATGCTAA ATGTTGTGCT TATTGGTGAA GGCCCAACCA AGACCATAAT CACCGGTGAC 1020 CAGGCAGTAG TTCCTAACCG TATATCAACA TGGCATACAG CCACCCTTGG TGTTTGTGGT 109135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGCAGTAG TTCCTAACCG TATATCAACA TGGCATACAG CCACCCTTGG TGTTTGTGGT 1080 GATGGTTTCG TTATGAAGGA CATGGGTATT GAAAACACAG CAGGACCCAC AAAAGAACAA 109195 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGTTTCG TTATGAAGGA CATGGGTATT GAAAACACAG CAGGACCCAC AAAAGAACAA 1140 GCCGTTGCAT TGAGAATTAA TGCTGATAAG GCTGTTCTCT ACAACTGCAA TATCGATGGT 109255 |||||||||| |||||||||| ||| |||| | |||||||||| |||||||||| |||||||||| GCCGTTGCAT TGAGAATTAA TGCCGATAGG GCTGTTCTCT ACAACTGCAA TATCGATGGT 1200 TACCAAGACA CGTTATATGC TCACTCAGGA AGACAATTTT ATCGTGATTG TACCATTACA 109315 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TACCAAGACA CGTTATACGC TCACTCAGGA AGACAATTTT ATCGTGATTG TACCATTACA 1260 GGCACCATTG ATTTCTTGTT TGGTGATGCA AGTGCTGTTT TCCAAAACTG CAAATTGATT 109375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCACCATTG ATTTCTTGTT TGGTGATGCA AGTGCTGTTT TCCAAAACTG CAAATTGATT 1320 GTGAGGAAAC CAGGTCCTAA TCAAGCTTGC ATGATCACTG CTCAAGGAAG GATGAGAAAA 109435 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGAGGAAAC CAGGTCCTAA TCAAGCTTGC ATGATCACTG CTCAAGGAAG GATGAGAAAA 1380 GATTCCTTAG GTGGATTCGT TATCCAAAAT TGTGACATCA AGGCTGATAA AGCACTCACT 109495 |||||||| | || |||||| |||||| ||| |||||||||| |||||||| |||||||||| GATTCCTTTG GTACATTCGT TATCCAGAAT TGTGACATCA AGGCTGATCC AGCACTCACT 1440 AGCGCCAATC CACCAGTCAA AGTCTATCTT GGACGTCCAT GGAAGGAGTT TTCCAAGACC 109555 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGCCAATC CACCAGTCAA AGTCTATCTT GGACGTCCAT GGAAGGAGTT TTCCAAGACC 1500 ATCATAATGC AATCAAACAT CGATGGATTC GTCGATCCAT CAGGATGGTC ACCATGGAAC 109615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATAATGC AATCAAACAT CGATGGATTC GTCGATCCAT CAGGATGGTC ACCATGGAAC 1560 ACAACTGATT TTGGAATACA CACATGTTTT TATGCAGAGT ATCAGAACAG AGGACCAGGT 109675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACTGATT TTGGAATACA CACATGTTTT TATGCAGAGT ATCAGAACAG AGGACCAGGT 1620 GCTGCACTTG ACAAAAGAGT CTCCACATGG AGAGGTTACC AAAAGGATAT TTCAGGAGAC 109735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGCACTTG ACAAAAGAGT CTCCACATGG AGAGGTTACC AAAAGGATAT TTCAGGAGAC 1680 GTTATTAACA GCTTCACTGC CGGTAAATTC ATTAATACAC AACAGCCATG GTTACCAATG 109795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || GTTATTAACA GCTTCACTGC CGGTAAATTC ATTAATACAC AACAGCCATG GTTACCAGTG 1740 TTTGATATTC CCTATGAAGC TGGCATGATG AAGGTGTAAT TACATATACC ATTCATCCTG 109855 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ||||| |||| TTTGATATTC CCTATGAAGC TGGCATGATG AAGGTGTAAT TGCATATACC ATTCACCCTG 1800 TAATTTTTTC TAATTATTCA AAATTATATT TCCT 109889 |||||||||| |||||||||| |||||||||| |||| TAATTTTTTC TAATTATTCA AAATTATATT TCCT 1834 hqPGS_C01HBa0163B20.1+_SGN-U312517+ (108056 109889) ******************************************************************************** EST sequence 8 +strand 947 n (File: SGN-U333615+) 1 GCAAGGGCNN NNAGGGNGGG TTNNTTACGT AAACTCCTGT ATGTAAACTC TGTGACTCCA 61 CCGCGGTGGC GTGCCGCTCT ACAACTAGTG GATCCACCGG GCTGCAAGAA GGGAACTCCC 121 CCCATTAAAA AAATCCAAAA AAATCAAAAA AACCAAAAAA ATGACAAACA ATGTGGTAAT 181 TGGTGGAATA TCTACTGTTC TTGTGGTGAC TAGTGTGGTA CTAGCATAAC TCACCCTGAC 241 TAAACATGAT TCTGACCCTT CATCAAATGG ATTTGCAAAC TTAACAAAAT AACTAAGATC 301 TATGTGTCAA CCCACACCAT ACAAACAAAC TAGTGAAAAA ACCCTATGCG CAGCAAAGAA 361 TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA 421 GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA 481 CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT 541 CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC 601 ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA 661 ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG AACTAAATAG 721 CAATGCTCTT TCCATGGTCA ACAACTTCGG TGAAATGATC ACACAAAACA CAAGCCTTTA 781 CCGCAAATTG TAATCAAACA ATGACTTATT TGTCGAAACC AGTAAACCTA AACTTCCTTC 841 AAATTTCTGC CTTCAAACCT AATGCTTTGG TTTTTTGCAA TGGAGGCGGC CAATTCAAAA 901 ACATTCCGGA AGGACTTTAA AGCTGTCCCC AAGACCCATC CAACTTC Predicted gene structure (within gDNA segment 106436 to 111147): Exon 1 108114 108958 ( 845 n); cDNA 99 945 ( 847 n); score: 0.907 MATCH C01HBa0163B20.1+ SGN-U333615+ 0.907 845 0.892 C PGS_C01HBa0163B20.1+_SGN-U333615+ (108114 108958) Alignment (genomic DNA sequence = upper lines): GGGTTGTTTC ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATC-A AAAAACCAAA 108172 ||| || | |||||||| |||||||| | |||||||||| |||||||| | |||||||||| GGGCTGCAAG A-AGGGAACT CCCCCCATTA AAAAAATCCA AAAAAATCAA AAAAACCAAA 157 AAAATGACAA AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG 108232 |||||||||| | || ||||| |||||||||| ||| || ||| |||||||||| | || ||||| AAAATGACAA ACAATGTGGT AATTGGTGGA ATATCTACTG TTCTTGTGGT GACTAGTGTG 217 GTGGCAGCCT GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA 108292 || ||| | ||||||| |||||||||| |||||||| |||||||||| |||| ||||| GTACTAGCAT AACTCACCCT GACTAAACAT GATTCTGACC CTTCATCAAA TGGATTTGCA 277 ACTTCAACAA AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA 108352 | | ||||| | | | | |||||||||| |||||||||| |||||||||| |||| ||||| AACTTAACAA AATAACTAAG ATCTATGTGT CAACCCACAC CATACAAACA AACTAGTGAA 337 AAGACCCTCT CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC 108412 || ||||| | ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACCCTAT GCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC 397 GAAGCCACTG TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT 108472 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCCACTG TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT 457 GCTAGTGATC CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC 108532 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAGTGATC CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC 517 GTTGAGGAAC TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG 108592 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| GTTGAGGAAC TAAGGGGCTC TGTCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG 577 GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT 108652 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT 637 TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG 108712 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG 697 AGCACCACTC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CGGTGAAATG 108772 |||||||| | |||| || | |||||||||| |||||||||| |||||| ||| |||||||||| AGCACCACCC GGGAACTAAA TAGCAATGCT CTTTCCATGG TCAACAACTT CGGTGAAATG 757 ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC ATTTGTCGAA 108832 |||||||||| ||||| |||| | ||||||| |||| ||||| ||| ||||| |||||||||| ATCACACAAA ACACAAGCCT TTACCGCAAA TTGTAATCAA ACAATGACTT ATTTGTCGAA 817 GCCAGTAATC GTAAGC-TCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 108891 ||||||| | ||| | ||| |||||||||| ||||| ||| ||||||||| |||||| | ACCAGTAAAC CTAAACTTCC TTCAAATTTC TGCCTTCAAA CCTAATGCTT TGGTTTTTTG 877 CAGTGGAGGC GGACAATACA AGACCATTCA GGAAGCAC-T TCAAGCTGTC CCCAAGAGTA 108950 || ||||||| || |||| || | | ||||| ||||| || | | |||||||| ||||||| CAATGGAGGC GGCCAATTCA AAAACATTCC GGAAGGACTT TAAAGCTGTC CCCAAGACCC 937 GTCCAACT 108958 ||||||| ATCCAACT 945 hqPGS_C01HBa0163B20.1+_SGN-U333615+ (108114 108958) ******************************************************************************** EST sequence 6 +strand 948 n (File: SGN-U333614+) 1 GAGCCCCCGG CTTGTGNNGC TGATACCNCT GATANNTCAG TAACAATGCA GAGCTCCCCG 61 CGTGGCGGAC GCTCTAGAAC TAGTGGATCC CCCGGCCTGC AGGAATTCGG CACGAGGAAA 121 ACACCAAAAA AATGACAAAG AATGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG 181 CTTTGAGTGC GGTATCCTTT GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG 241 GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA 301 CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG 361 TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA 421 AGAAAGCTGC CAGTGATCCT TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG 481 ATCTAGCCGT TGAGGAACTA AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA 541 AGATGAAAGA TATAATGGAT GACCTCAAGT CATGGCTTAA CGCTGTCGTT GCTTATGAAG 601 AGACTTGTTT AGATGGTTCA ACAAATCAAA ATACAGTGCA ACCCCTGACG AAATGATGAA 661 GCTAATGAAC CCACCCGGGA ACTTAATAGC AATGCTCTTT TCATGGTCAA CAGCTTCGGT 721 GAAATGATTA CCCAAACACC AGCCCTTACC CGCAAATGGT TTCAAACAGG GACTCATTTT 781 TCGAACCAGT AACCGGACCT CCTTTAATTT TTGCCTCCAA CCTAAGCTTG GGTTTTTGCC 841 ATGGGGCCGC CATTCAAAAC CTTTGGAAGC CTTTAACTTG CCACGAACGG TCAATTCTTT 901 GTTTTCTTAT AAGGGGGCCC TCAGGAACCT TTAATTCAAA AAAGTCTT Predicted gene structure (within gDNA segment 106347 to 112572): Exon 1 108162 108916 ( 755 n); cDNA 118 861 ( 744 n); score: 0.923 MATCH C01HBa0163B20.1+ SGN-U333614+ 0.923 755 0.796 C PGS_C01HBa0163B20.1+_SGN-U333614+ (108162 108916) Alignment (genomic DNA sequence = upper lines): AAAAAACCAA AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG 108221 |||| ||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| AAAACACCAA AAAAATGACA AAGAATGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG 177 TGGC-TTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA TACTTCATCA 108280 |||| ||| | | | || | | || ||||||| |||||||||| |||||||||| |||||||| TGGCTTTGAG T-GCGGTATC CTTTGTCACC CTGACTAAAC ATGATTCTGA CCCTTCATCA 236 AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA 108340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA 296 CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC 108400 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC 356 AAGGTTGCAT TCGAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA 108460 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTTGCAT TCGAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA 416 GTTAAGAAAG CTGCTAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG 108520 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG 476 TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC 108580 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTGTCGCTA GGATTGAGAA CTTTGATTTC 536 TCTAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT 108640 |||||||||| | |||||| | |||||||||| |||||||||| ||| |||||| |||||||||| TCTAAGATGA AAGATATAAT GGATGACCTC AAGTCATGGC TTAACGCTGT CGTTGCTTAT 596 GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG 108700 |||||||||| |||||||||| |||| |||| ||| |||||| ||||||||| |||||||||| GAAGAGACTT GTTTAGATGG -TTCAACAAA TCAAAATACA GTGCAACCCC TGACGAAATG 655 ATGAAGCTAA TGAGCACCAC TCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAGC 108760 |||||||||| ||| | |||| ||||| || | |||||||| |||||| ||| |||||||||| ATGAAGCTAA TGAAC-CCAC CCGGGAACTT AATAGCAATG CTCTTTTCAT GGTCAACAGC 714 TTCGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC 108820 |||||||||| |||| || || || ||| | |||||||||| ||| ||| || |||||| ||| TTCGGTGAAA TGATTACCCA AACACCAGCC CTTACCCGCA AATGGTT-TC AAACAGGGAC 773 TCATTTGTCG AAGCCAGTAA TCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT 108880 |||||| ||| || ||||||| || | ||| ||| ||||| ||||||||| ||||| ||| TCATTTTTCG AA-CCAGTAA CCG-GACCTC CTT-TAATTT TTGCCTCCAA -CCTAA-GCT 828 GTGGTTTCTG CCAGTGGAGG CGGACAATAC AAGACC 108916 ||||| || ||| ||| || | | | || | || ||| TGGGTTTTTG CCA-TGG-GG CCG-CCATTC AAAACC 861 hqPGS_C01HBa0163B20.1+_SGN-U333614+ (108162 108916) ******************************************************************************** EST sequence 30 +strand 1309 n (File: SGN-U320104+) 1 CCTCGTGCCG TCTAAGCTAG TTTTTGAAGT ATGAGTTTGG CTCAAAGCCT AATTTTAAAT 61 AGTTTTCCCA CGCCATATGT CCAGTCTTGG ATATTGTAGG CTCATCTATA AACATATTTT 121 CTGTCCAAAC ATCATATATT TGTGGACATC AGAAGCATGA AACTTGATCA TTATACTGTT 181 CTAAATCTGC AAAAGAAAAA AAAGTAATAA TAATATAATA ATAATAATAA TTCTCCCAGC 241 ATCATAATTT GCCGGCAAGT TGTGATGCGA ATCCACCTAT AGGTGAAGAA CATAGTGTTA 301 AATTTGACAA GATTCAAAAA TGGATTAATG AGAAGATATG GTAGTTAGGA GGATAATTCT 361 TCATTGGTAG AAAAGTCAAG ATAGCACCTT TTGTAGGTGA AATTTAGGTG AACCATAAAT 421 TGATTTCACA AGGTAAATCT TGACATTTTG ACATTGTGAT GTCATGTATG ACATCAATAG 481 GAAGAATTCA CTCCTATAAA TAGGTCGCTC CTAATTCATT TGTAAAACAC CTCTGACTTG 541 TCTTCTCATC TCCTAGGCAT TTGTTCTTCT TTATCTCTTG TAGTATTTCA CTTGTACTCT 601 TTTGGAGTGA AATAAATATT GGTTGGTTGT GTCCGGGACT ATGCAAAAGA AAACAAAAGT 661 TTGTCGAACC TCATTAATTT CTGGCGTTCT TTTTGTTGTT GTCTCATTTA CTATTTATTA 721 GCTACATTTA GATATAGCAG TTGTGATTCC ATCACTCTCT ATATATTCGG CTTCAGCAAC 781 ACATATACAT ACAACTTTTT TCCAGTTCTA ACTTTTAATT TTTCTGTTGT GCTGTTGTGA 841 TGCTAAAATT TGATTTTCAA TACTCACCGT AAATTTCTAA TTCTAATTCG GATTTGACTA 901 TTTTCCAGGG AGAGTGGCGG TTGTTGATTC TTTCAGTGGT ACTCTGACCA CACGAGGCCC 961 CGGTTACTCT GCTAGTTACT TTGTTGATTC TATCAGTGGT AGTCTGACCA CCCGAGGCCC 1021 CGGTTACTCC CTAAGATTTC ATATTGTCCA TGTGGTTCTG GCACATGCCT ATATCAGACA 1081 GCCAAAACAG GGGGGAAATT GGGTCAATTT CGAATATACA TGTATGATAA AGTAATTAGT 1141 TTACAATAAA CATAGTCACA TTTTATTTAC ATAAAAAAAA ATTGTCAAAA GTTATAACTA 1201 TACAATATAG CTTGCGACTT ACATATACAT TAATTATCAT ATATTCAAAA AGCTGAATAT 1261 AACTTATTTG TACATAAAAA AAAAAAAAAA AAAACTCGAG GGGGGCCCG Predicted gene structure (within gDNA segment 108451 to 119753): Exon 1 110856 110908 ( 53 n); cDNA 185 234 ( 50 n); score: 0.736 Intron 1 110909 111176 ( 268 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0) Exon 2 111177 111190 ( 14 n); cDNA 235 248 ( 14 n); score: 0.786 Intron 2 111191 111564 ( 374 n); Pd: 0.736 (s: 0), Pa: 0.000 (s: 0) Exon 3 111565 111589 ( 25 n); cDNA 249 273 ( 25 n); score: 0.600 Intron 3 111590 111686 ( 97 n); Pd: 0.990 (s: 0), Pa: 0.781 (s: 0) Exon 4 111687 111695 ( 9 n); cDNA 274 282 ( 9 n); score: 0.556 Intron 4 111696 112059 ( 364 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.78) Exon 5 112060 112514 ( 455 n); cDNA 283 745 ( 463 n); score: 0.829 Intron 5 112515 116425 (3911 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0) Exon 6 116426 116461 ( 36 n); cDNA 746 781 ( 36 n); score: 0.917 PPA cDNA 1276 1295 MATCH C01HBa0163B20.1+ SGN-U320104+ 0.819 592 0.452 C PGS_C01HBa0163B20.1+_SGN-U320104+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514,116426 116461) Alignment (genomic DNA sequence = upper lines): ATCAGCAAAA AAAAAAAGTA TATTTATACT TTTTATTATT AATAATGAAT TCTTTTCATG 110915 ||| |||||| |||||| || | ||| | | || | | |||||| ||| ||| ATCTGCAAAA GAAAAAAAAG TAATAATA-A TATAAT-AAT AATAAT-AAT TCT....... 234 AAAAAAATTA AACGTGATAT TTTATTTTAT AAAAATTTGA GGCCCCCAAT TTCAGCGGCC 110975 .......... .......... .......... .......... .......... .......... 234 TAAAAAACAA TAGTAAAGAG TCGACACTGC AATTGTGGTG AAAACGATAT AGAAAGGGGT 111035 .......... .......... .......... .......... .......... .......... 234 TTTGAGGGGC AATTTTGTGT TTAAAAATGT CAATGTATGC ATTAAATCTC TTTGCATTAC 111095 .......... .......... .......... .......... .......... .......... 234 TAATACCTAG AAATCATTGG TGTTAGTAAT ATACTCGTTA ATACACAATA GAGTGTATAA 111155 .......... .......... .......... .......... .......... .......... 234 CTAATGCAAG CATTAATAAT ACCAAGCATG AAAATGTACA CCAAACAAGA TACTACAAAT 111215 || ||||| | ||| .......... .......... .CCCAGCATC ATAAT..... .......... .......... 248 ACATAAAGCT AGCTCATGCA TTAATTTTGC TAATACATTC TACCAAACGA CCCCTTAGAG 111275 .......... .......... .......... .......... .......... .......... 248 TTTTGAAGAG TTAAAATTGT TCAAAGTGGT TATTGATAAC AACCAGTGCT ACAAGTCTCG 111335 .......... .......... .......... .......... .......... .......... 248 GAATTAAATT TGTTCAGTTC CATCAGCTTC ACAATAGGAA TTTTTGGTTA GTTTGACTAC 111395 .......... .......... .......... .......... .......... .......... 248 TGCCTTTGTC CCAAGGCTTT AATTTTGAGT TATAAGACGA GATGCAGAGA AAGTTAAGGC 111455 .......... .......... .......... .......... .......... .......... 248 TGACGTTTTA CTTTAGTCAA TGCTTGAGGT TAGAACAGTT ATTTTTGAGT TTAAATGATT 111515 .......... .......... .......... .......... .......... .......... 248 TCACTAGGCC CAAATGGTGA TACTTGGTCT AGTTGAAGAT TTGGTTCAGT TTCCGAAACT 111575 | | ||| | .......... .......... .......... .......... .........T TGCCGGCAAG 259 TTTGGATGAG TTTCATATCC TTACTTGAAA ATTTAGACAT TCTTAAGTTA AAGTTGACTT 111635 || |||| | || TTGTGATGCG AATC...... .......... .......... .......... .......... 273 TTGTCAATGT CTGGTTAAAG TGACTTTGTT TTGGTGTTCT GATGATTTCA GCACTTCGAA 111695 ||| | | .......... .......... .......... .......... .......... .CACCTATAG 282 ATATCATTTT TAAGCTATGG ATAAATTGAT ATTGACATAA ACTTGTTGAT TCATCAATTA 111755 .......... .......... .......... .......... .......... .......... 282 TTTTCATTAT ATTAGCCACA TATAAGCTTG AAAATTTGAG CTTTTCCCGA ATAAAGTTAA 111815 .......... .......... .......... .......... .......... .......... 282 ATTTTGATAA ATTGAGAATT TCAAGTTCGA TTTTAACTCC ATCTTTATGA AATTTCATAT 111875 .......... .......... .......... .......... .......... .......... 282 TTGAAATGGT AGAAACTGGA CTAGAGAGAG ATGTTCAAGA GTATGTGATG GTTGTTTTCC 111935 .......... .......... .......... .......... .......... .......... 282 AAGTAATATA ATGTGTGCAT GTTAACTGTC TGTACAACTT GTAAAATACA TTTGGTAAAA 111995 .......... .......... .......... .......... .......... .......... 282 ACATAAGGGT TAAATGTGGA AAGATGAACT GTTGACAATC TCATGCAACA AAGGTGTTTT 112055 .......... .......... .......... .......... .......... .......... 282 TCTTATTTGT ATTAATGTGT TAAACTTGAC AAGATTCAAA AATGGATTAA TGATAAGATA 112115 | | | |||| |||| ||||| |||||||||| |||||||||| ||| |||||| ....GTGAAG AACATAGTGT TAAATTTGAC AAGATTCAAA AATGGATTAA TGAGAAGATA 338 TGGTAGTTAG AAGGATAATT CTTCATTGGT AGAAAAGTCA AGAAAGCACC -TTTGTAGGT 112174 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| ||||||||| TGGTAGTTAG GAGGATAATT CTTCATTGGT AGAAAAGTCA AGATAGCACC TTTTGTAGGT 398 GAAATTTAGG TGAAACATAA ATTGGTTTCA CGAGGTAAAT CTTGACA--- T---ATTTTG 112228 |||||||||| |||| ||||| |||| ||||| | |||||||| ||||||| | ||| || GAAATTTAGG TGAACCATAA ATTGATTTCA CAAGGTAAAT CTTGACATTT TGACATTGTG 458 ATGTCATGGA TGACATTAAT AGGAAGAATT CACTCCTAT- -GTAGGTAGC TCCTAATTCA 112286 |||||||| | |||||| ||| |||||||||| ||||||||| ||||| || |||||||||| ATGTCATGTA TGACATCAAT AGGAAGAATT CACTCCTATA AATAGGTCGC TCCTAATTCA 518 TTTGTAACAC ATCT-TTACT TGCCTTCTCA TCTCCTAATA CATTTGTTCT TCTTCCCATC 112345 ||||||| || | || | ||| || ||||||| |||||| | |||||||||| |||| || TTTGTAAAAC ACCTCTGACT TGTCTTCTCA TCTCCT-AGG CATTTGTTCT TCTTTATCTC 577 TTGTAGTATT TTACTTGTAA TTTTTTGGAG TGAAATAAAT ATTGGTTGGT TGTGTCCGAG 112405 |||||||||| | ||||||| | |||||||| |||||||||| |||||||||| |||||||| | TTGTAGTATT TCACTTGTAC TCTTTTGGAG TGAAATAAAT ATTGGTTGGT TGTGTCCG-G 636 GAGTAGGCAA AAGAAAATAA AATTTTACCG AACCTCGTTA ATTCTTGGTA TTCCTTTTAT 112465 || || |||| ||||||| || || ||| || |||||| ||| ||| ||| ||| |||| | GACTATGCAA AAGAAAACAA AAGTTTGTCG AACCTCATTA ATTTCTGGCG TTCTTTTTGT 696 TGTTGTCTTA TTTACTATTT ATTAGCTACC TTTAGTTATA GTAGTTGTGA TTCATGTCAC 112525 |||||||| | |||||||||| ||||||||| ||||| |||| | ||||||| TGTTGTCTCA TTTACTATTT ATTAGCTACA TTTAGATATA GCAGTTGTG. .......... 745 ATCCCGAGAC CACAACCTAT AATATATGGC CCTCTCGGAG TGCAACCGGC GTACTTGACC 112585 .......... .......... .......... .......... .......... .......... 745 TCTCGGAGGT CTTGTACAAG CCCTTCCATA TCGTTCATCA CATATAAACA TATGAAAGTA 112645 .......... .......... .......... .......... .......... .......... 745 GTGCAGAATT AAAACTTTTG ATAAACATTC TATAATTCTT TAAAAACTCT TTCATATAAA 112705 .......... .......... .......... .......... .......... .......... 745 ACTCATAGGA TATACTAAGT CTCATTTCAT CAAATCTTAG ACACAAGAGT ACTTTGGGGC 112765 .......... .......... .......... .......... .......... .......... 745 ATGGCCCATA GACAATAGAA ATACAATATT ACTAAGTCTA TTACAATAGT TTGATAAGGG 112825 .......... .......... .......... .......... .......... .......... 745 AAATAAAAGA CATTTATGCC CTCGAGTCAA ATGAGGACAT ACTTCAACTA GCTTGAACAA 112885 .......... .......... .......... .......... .......... .......... 745 TCTTCTAATC CAAGTTTTGC TCTCCAAAAG CACCTTCACC TATGAATCAC TTTAGAGATA 112945 .......... .......... .......... .......... .......... .......... 745 GATAAAATCA TGGAATTAGT ACAATCACAT TTATTAAGTA TGACATAATA CATAAAAATC 113005 .......... .......... .......... .......... .......... .......... 745 ATGAAAATGG ACATTTGTTG AAAATATGCA TCATTTGATT TAAATATCAT AATAACAACA 113065 .......... .......... .......... .......... .......... .......... 745 TTTAACAACT TAGAAACACA TAAGAAATTA ATTAGCCAAT TTATCACATT TTTAAGGCAA 113125 .......... .......... .......... .......... .......... .......... 745 CTTTACGATG AACTACTTCA CTGTACAGTG AACTCCTTCA CTATTACAGT GAAGTTTCTT 113185 .......... .......... .......... .......... .......... .......... 745 ACCTTCACTT TAGACACCTT CTATCATGTA ATCCTCTCAC TAAAAGCTAT CCTAAAACTC 113245 .......... .......... .......... .......... .......... .......... 745 ATTTAAGTAA GACAAAGAGA GATCGCTCAT ACAACCTCTC TAGGCACACC TAAATGATCT 113305 .......... .......... .......... .......... .......... .......... 745 TTAAGACCAC CTATAATGAG ATCAACACAC ACTTACAAGA CACCAAACAT ATGAACATGA 113365 .......... .......... .......... .......... .......... .......... 745 GATTCTTCTA CCAAAGGTGA TTCAAAGTCT CACTTGAGTG TATTGTGAAG CGACCGCCCA 113425 .......... .......... .......... .......... .......... .......... 745 TACAATCCCT TACACACACT TAAGATATCT TATAGACTAC CTAAGATAGA ATCCTTCTAA 113485 .......... .......... .......... .......... .......... .......... 745 CTTAATACAA CAACATATAG ATGATATGAC ATTCTCCTTC CAAAGGCTAT CAAAATACTT 113545 .......... .......... .......... .......... .......... .......... 745 ACTTAAGTAA ATCAAGAAGA TAACGTTCAT ATTGACCTAT TCAAGATTAC CAAAATAATC 113605 .......... .......... .......... .......... .......... .......... 745 TTTAAGACTA CCTAAGGCTT AGATCATGTC TACATAATCA ACCATCTTCC CTAAGTAGAG 113665 .......... .......... .......... .......... .......... .......... 745 TCATTCTTAG GACTTATCTA GGTAAGATAC GAAGTGACCA TTCTTATGCC CCCTTCACAC 113725 .......... .......... .......... .......... .......... .......... 745 CTTAACTAGA CAACTATTAA CTACTATAGA TAAGTACTTA TTCATTTAAC ATACTTTCTT 113785 .......... .......... .......... .......... .......... .......... 745 AACTTAATTC ATTACATTCA TTTAAGACTC ATTCATCACA TAAGGACATT CAAGTAATGG 113845 .......... .......... .......... .......... .......... .......... 745 TCTTGGACAA CACCTAGGGA CTCTAACTAA CATCTTCAAA ACTAACATCT TCAAAGTCTA 113905 .......... .......... .......... .......... .......... .......... 745 TTGTGCAATG TCTAGATAGT ATCTCATACC ATCACCTAAA CTTCATTGAA CTTCTCTAAT 113965 .......... .......... .......... .......... .......... .......... 745 GCTAGTAGGT ATCCCATATG ATAAGAATAA ACAATAAACA ACATAGAAAA TGATAGATAA 114025 .......... .......... .......... .......... .......... .......... 745 ATTTGGAGTT CTAACCTACT CCAATGAGGG TGTTCTACTT GCCAAGTGTA GAAGTAGCAC 114085 .......... .......... .......... .......... .......... .......... 745 ACATCCATGT AGGCACATAA CAATAAGGAA TATGACGGGC TTTTATGCAC TCTAGTCATT 114145 .......... .......... .......... .......... .......... .......... 745 CTCAAGTAGA GATACATTGT ACTCTAGTCT CATTTTCAAG TAGAGCTACT TCTTATAACA 114205 .......... .......... .......... .......... .......... .......... 745 TACTCACTCG GTGCTAGCGT TTGTTCTCAT AGAGTCATTT GAATTAAAGG TTCATATAAA 114265 .......... .......... .......... .......... .......... .......... 745 GGAGTTCAAA ATCTAGTTCA TAACCCAATC ACATTCACCC TACCAAAGAT GTCCTCTAGG 114325 .......... .......... .......... .......... .......... .......... 745 AATACCATAG AATTGCGACA AAGATAGATC ATTATGACTT TCCTAAGGAT GATATGATGT 114385 .......... .......... .......... .......... .......... .......... 745 CGTTCAACCA ATCAACCCTA AGTCATTCAT TACATGAAGG ATACCATTAC GATTTTTTAC 114445 .......... .......... .......... .......... .......... .......... 745 TTTCACATTC ATAACCTTAC CACTAGGTTT AAGGTTCCAC GCATATGACC TTCGTAACAT 114505 .......... .......... .......... .......... .......... .......... 745 AATTCAAGGT CTCACATATA ATTCATTCAT ACATGACAAG GGTGCACTAA GATTACCTAG 114565 .......... .......... .......... .......... .......... .......... 745 TAAAGACATC TTACATTCAC ATATCATTCA TATATCAAGT AAGGGACACA AGTCTACCAA 114625 .......... .......... .......... .......... .......... .......... 745 AACTAGACAC AATATTCTGT ACTTTATTAC ATATAGCATA TCATTCTTTG AAGCACTCAG 114685 .......... .......... .......... .......... .......... .......... 745 GAATAACCCT TATCATCTTT ATGTAATCCT ATACATTATT ATAACATCAT AATTATAACC 114745 .......... .......... .......... .......... .......... .......... 745 ATCATAGACT CATATAGTCA AGTAGGAACA ATCATGCATC AACTCTAAGA CTACACACCC 114805 .......... .......... .......... .......... .......... .......... 745 AAGCACATAG TCATAGTCTA AATGACCACC TAACATCAAT AGAAGAATAT ATACTTTCAC 114865 .......... .......... .......... .......... .......... .......... 745 ATTGATCACA TGTAGATATA TATGCTCATA CTTCACATAA ATAAACTACA CAAATCATCA 114925 .......... .......... .......... .......... .......... .......... 745 TAATACTTCA ATTAGTTTGC CGATGAGGCC ATGATCATCA TAATACATAA AGTAACACCG 114985 .......... .......... .......... .......... .......... .......... 745 ACAAGGCCAT ATCAATTGCA AGTAAACCAC ATAGCACCGA CACCATAAGC GTACAATACC 115045 .......... .......... .......... .......... .......... .......... 745 AATTACAACA TAATTGAATT ATAATTAATA TAAAATAAAG AGAATTATGG AAGCATACCA 115105 .......... .......... .......... .......... .......... .......... 745 CCAATACATT CTCCCCACTT CAATCCATAC CTAATAATCC AATTCAATAC CATAAGGCCA 115165 .......... .......... .......... .......... .......... .......... 745 TTACCAATGT CTATGAATAA TAATTCAATA CAAAACTATA ATATTCAATG AATCTAGGTC 115225 .......... .......... .......... .......... .......... .......... 745 AATTCAATAT ATGTTTAGCA ATATAAGACC AATTAGACAT CAATTAAATA CAATTATTAC 115285 .......... .......... .......... .......... .......... .......... 745 ATCATTCAAT AGCCCATAGA AAACTACACT AGAATTCATA AGCATTAAGT CAATATCACT 115345 .......... .......... .......... .......... .......... .......... 745 TAACCCATAA GTAGTCAAAA ACTAGGATTC ATCAATTACA TGGGTTCATA GGCTAATTGA 115405 .......... .......... .......... .......... .......... .......... 745 GTTAGAATCA TATAATTAAC AAATATTCAA TCAATATACA ATGATTTAAA ACCTTTAATG 115465 .......... .......... .......... .......... .......... .......... 745 CAAGAACCTA CGGATAGATA ATAAAATTAG ACAATTCATC TTTGAAAACT TTAGAAAACT 115525 .......... .......... .......... .......... .......... .......... 745 CTTTGAATGT TGGGCTCCTT AATTAATAAA GTTTCAAGGA TAACAAATCA TACCTCAATG 115585 .......... .......... .......... .......... .......... .......... 745 ATGTTATTCC ACCAATTTGA TGAATAATCA CCACTCAATT ATCCAATCCA AGCTCTTCCT 115645 .......... .......... .......... .......... .......... .......... 745 TGAGTTTTGT TCCAATAGAG TTCTAGAGAA TTTCTAAGGG AATTTGGGTT TTGATTTTGA 115705 .......... .......... .......... .......... .......... .......... 745 AGAATGAATT CTTCTGAATG TAAAAGGCTA ATAAACATGT TTAGAATACC CAAAATACCC 115765 .......... .......... .......... .......... .......... .......... 745 CAACCAACAG ACTGTTCTGT TGGTCTATTG TTTGGGATTG AGGCTGGTAC TTGGCTTGGT 115825 .......... .......... .......... .......... .......... .......... 745 CATTTCCCAC TCCTAAGTAC TGACCATGAC ACCCATCGAC GGGGCATCAA CTGTCCCACG 115885 .......... .......... .......... .......... .......... .......... 745 AGCCGTCTAC TAACTCTGTC GTTTGGGGCT GTCTTGGCTT CAAGGAAAGG GTCCTTCCTC 115945 .......... .......... .......... .......... .......... .......... 745 AAGGACCCTT GGTTGGTCCT TGGGGACTTT CACCCAGACG TTTACACTCC AAATATGTTT 116005 .......... .......... .......... .......... .......... .......... 745 ATATACAAGT TTATTACCTC TCACATGAAT TTCATAAAAA ACGAACTCGT AAAACTCAAC 116065 .......... .......... .......... .......... .......... .......... 745 GAATCATTCC AAGACACACA AGGTCGTTTC AAGGAAAACC TTTTGAATAT TATAGACGTT 116125 .......... .......... .......... .......... .......... .......... 745 CTTGGACATT TGACCTCCAA ACTTCACGAA ACTTGACGTG TTGACTATAA ACACTATATT 116185 .......... .......... .......... .......... .......... .......... 745 AACTCCTAAT AAGAACCTCA TTAATTCAGA AAACACACAT ATAGACACAT AATCACACAT 116245 .......... .......... .......... .......... .......... .......... 745 GAGGCACATA TGTGCCTTAG TTGTCCAACG TCTTAGTCAT CCCTTGATGT TTGACTTCTA 116305 .......... .......... .......... .......... .......... .......... 745 ATGCACCTAA ACTCTTAGAC ACTGCCTCAA TATCAAATTA TAAAACATTT TAGGACCTTA 116365 .......... .......... .......... .......... .......... .......... 745 GACCATCGTG AAAACCATGT TAGGATCAAG CTTCGCCTAA GTCATTTTCA AGGTATTACA 116425 .......... .......... .......... .......... .......... .......... 745 ATTCCATTAC TCTCTATATA TTCCGCTTCC GCAACA 116461 ||||||| || |||||||||| ||| ||||| |||||| ATTCCATCAC TCTCTATATA TTCGGCTTCA GCAACA 781 hqPGS_C01HBa0163B20.1+_SGN-U320104+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514,116426 116461) ******************************************************************************** EST sequence 16 +strand 913 n (File: SGN-U337018+) 1 GCCCCAGAGA GGCAGGTCTT ACCTAAGATA ATTCTAGTAC TCCACTGCGG TGGCGGCCGC 61 TCTAGAACTA GTGGATCCCC CGGGCTGCAA GAATTCGGCA CGAGGCTCAT CTCCTAAGGC 121 ATTTGTTCTT CTTTCTCTCT TGTAGTATTT CACTTGTACT CTTTTGGAGT GAAATAAATA 181 TTGGTTGGTT GTGTCCGAGG AGTAGGGAAA AGAAAACAAA AGTTTGTCGA ACCTCGTTAA 241 TTCCTGGTGT TCTTTCTCTT GTTGTCTCAT TTACTATTTA TTAGCTACTT TTAGATATAG 301 TAGTTGTGAT TCCATCACTC TCTATATATT CGGCTTCCGC AACAGTTTAT GCATTTCGGA 361 TAATACTCAA AGATGGAAAT TTTAACATAC TTAAATAATT TGAACTTGAA GCTCATAATT 421 TCCCAAGCTT TCTTGCTCTT CCTGGATTTT TTTGGCACTA TTCTCTACAC CAGACCAAGG 481 ATTTGCTAGA CCAAGGAATA CTGAAATTTC TTAATGACCT TAATGAATCA TATGATCAGA 541 GTAGAAGGCA GATTCTTCTA AAATCTTCTG TTCCTACAAT TAATCAAGTG TATGCTATGA 601 TAATTGAGGA CGAAAGTGAG AGATCCATTA GTGTTCATAA TGTCATTGAT GGCAATGGAG 661 GTCGTGAGCC ATTCGCTATG CAAAGCTGTT GTGCACGTGG TCCTCCACAC CACTAGTCAC 721 CACTAGTGTG TGATCATTAT CATATGGAAG GTTATACCAA GAATCAATGC TATAAAATCA 781 TTGTCTATTC CGGAGATTAA AGGAAGAAGA AACCAGGTGT TTTAAAAGGC AACCCTTTGG 841 TAATGGCCAC AATATTGGTG GACTACTGGC CTGAATTAAG GAACCTGTCT GGGTTTGCCA 901 AATCAATTTC AAC Predicted gene structure (within gDNA segment 110158 to 119138): Exon 1 112252 112267 ( 16 n); cDNA 89 104 ( 16 n); score: 0.625 Intron 1 112268 112310 ( 43 n); Pd: 0.728 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 112311 112514 ( 204 n); cDNA 105 308 ( 204 n); score: 0.892 Intron 2 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 3 116426 116467 ( 42 n); cDNA 309 350 ( 42 n); score: 0.881 Intron 3 116468 116709 ( 242 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 4 116710 116725 ( 16 n); cDNA 351 365 ( 15 n); score: 0.625 Intron 4 116726 117008 ( 283 n); Pd: 0.000 (s: 0), Pa: 0.261 (s: 0) Exon 5 117009 117045 ( 37 n); cDNA 366 402 ( 37 n); score: 0.649 MATCH C01HBa0163B20.1+ SGN-U337018+ 0.892 315 0.345 C PGS_C01HBa0163B20.1+_SGN-U337018+ (112252 112267,112311 112514,116426 116467,116710 116725,117009 117045) Alignment (genomic DNA sequence = upper lines): AAGAATTCAC TCCTATGTAG GTAGCTCCTA ATTCATTTGT AACACATCTT TACTTGCCTT 112311 |||||||| | | AAGAATTCGG CACGAG.... .......... .......... .......... .........G 105 CTCATCTCCT AATACATTTG TTCTTCTTCC CATCTTGTAG TATTTTACTT GTAATTTTTT 112371 |||||||||| || |||||| |||||||| | |||||||| ||||| |||| ||| | |||| CTCATCTCCT AAGGCATTTG TTCTTCTTTC TCTCTTGTAG TATTTCACTT GTACTCTTTT 165 GGAGTGAAAT AAATATTGGT TGGTTGTGTC CGAGGAGTAG GCAAAAGAAA ATAAAATTTT 112431 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| | |||| ||| GGAGTGAAAT AAATATTGGT TGGTTGTGTC CGAGGAGTAG GGAAAAGAAA ACAAAAGTTT 225 ACCGAACCTC GTTAATTCTT GGTATTCCTT TTATTGTTGT CTTATTTACT ATTTATTAGC 112491 |||||||| |||||||| | ||| ||| || | ||||||| || ||||||| |||||||||| GTCGAACCTC GTTAATTCCT GGTGTTCTTT CTCTTGTTGT CTCATTTACT ATTTATTAGC 285 TACCTTTAGT TATAGTAGTT GTGATTCATG TCACATCCCG AGACCACAAC CTATAATATA 112551 ||| ||||| |||||||||| ||| TACTTTTAGA TATAGTAGTT GTG....... .......... .......... .......... 308 TGGCCCTCTC GGAGTGCAAC CGGCGTACTT GACCTCTCGG AGGTCTTGTA CAAGCCCTTC 112611 .......... .......... .......... .......... .......... .......... 308 CATATCGTTC ATCACATATA AACATATGAA AGTAGTGCAG AATTAAAACT TTTGATAAAC 112671 .......... .......... .......... .......... .......... .......... 308 ATTCTATAAT TCTTTAAAAA CTCTTTCATA TAAAACTCAT AGGATATACT AAGTCTCATT 112731 .......... .......... .......... .......... .......... .......... 308 TCATCAAATC TTAGACACAA GAGTACTTTG GGGCATGGCC CATAGACAAT AGAAATACAA 112791 .......... .......... .......... .......... .......... .......... 308 TATTACTAAG TCTATTACAA TAGTTTGATA AGGGAAATAA AAGACATTTA TGCCCTCGAG 112851 .......... .......... .......... .......... .......... .......... 308 TCAAATGAGG ACATACTTCA ACTAGCTTGA ACAATCTTCT AATCCAAGTT TTGCTCTCCA 112911 .......... .......... .......... .......... .......... .......... 308 AAAGCACCTT CACCTATGAA TCACTTTAGA GATAGATAAA ATCATGGAAT TAGTACAATC 112971 .......... .......... .......... .......... .......... .......... 308 ACATTTATTA AGTATGACAT AATACATAAA AATCATGAAA ATGGACATTT GTTGAAAATA 113031 .......... .......... .......... .......... .......... .......... 308 TGCATCATTT GATTTAAATA TCATAATAAC AACATTTAAC AACTTAGAAA CACATAAGAA 113091 .......... .......... .......... .......... .......... .......... 308 ATTAATTAGC CAATTTATCA CATTTTTAAG GCAACTTTAC GATGAACTAC TTCACTGTAC 113151 .......... .......... .......... .......... .......... .......... 308 AGTGAACTCC TTCACTATTA CAGTGAAGTT TCTTACCTTC ACTTTAGACA CCTTCTATCA 113211 .......... .......... .......... .......... .......... .......... 308 TGTAATCCTC TCACTAAAAG CTATCCTAAA ACTCATTTAA GTAAGACAAA GAGAGATCGC 113271 .......... .......... .......... .......... .......... .......... 308 TCATACAACC TCTCTAGGCA CACCTAAATG ATCTTTAAGA CCACCTATAA TGAGATCAAC 113331 .......... .......... .......... .......... .......... .......... 308 ACACACTTAC AAGACACCAA ACATATGAAC ATGAGATTCT TCTACCAAAG GTGATTCAAA 113391 .......... .......... .......... .......... .......... .......... 308 GTCTCACTTG AGTGTATTGT GAAGCGACCG CCCATACAAT CCCTTACACA CACTTAAGAT 113451 .......... .......... .......... .......... .......... .......... 308 ATCTTATAGA CTACCTAAGA TAGAATCCTT CTAACTTAAT ACAACAACAT ATAGATGATA 113511 .......... .......... .......... .......... .......... .......... 308 TGACATTCTC CTTCCAAAGG CTATCAAAAT ACTTACTTAA GTAAATCAAG AAGATAACGT 113571 .......... .......... .......... .......... .......... .......... 308 TCATATTGAC CTATTCAAGA TTACCAAAAT AATCTTTAAG ACTACCTAAG GCTTAGATCA 113631 .......... .......... .......... .......... .......... .......... 308 TGTCTACATA ATCAACCATC TTCCCTAAGT AGAGTCATTC TTAGGACTTA TCTAGGTAAG 113691 .......... .......... .......... .......... .......... .......... 308 ATACGAAGTG ACCATTCTTA TGCCCCCTTC ACACCTTAAC TAGACAACTA TTAACTACTA 113751 .......... .......... .......... .......... .......... .......... 308 TAGATAAGTA CTTATTCATT TAACATACTT TCTTAACTTA ATTCATTACA TTCATTTAAG 113811 .......... .......... .......... .......... .......... .......... 308 ACTCATTCAT CACATAAGGA CATTCAAGTA ATGGTCTTGG ACAACACCTA GGGACTCTAA 113871 .......... .......... .......... .......... .......... .......... 308 CTAACATCTT CAAAACTAAC ATCTTCAAAG TCTATTGTGC AATGTCTAGA TAGTATCTCA 113931 .......... .......... .......... .......... .......... .......... 308 TACCATCACC TAAACTTCAT TGAACTTCTC TAATGCTAGT AGGTATCCCA TATGATAAGA 113991 .......... .......... .......... .......... .......... .......... 308 ATAAACAATA AACAACATAG AAAATGATAG ATAAATTTGG AGTTCTAACC TACTCCAATG 114051 .......... .......... .......... .......... .......... .......... 308 AGGGTGTTCT ACTTGCCAAG TGTAGAAGTA GCACACATCC ATGTAGGCAC ATAACAATAA 114111 .......... .......... .......... .......... .......... .......... 308 GGAATATGAC GGGCTTTTAT GCACTCTAGT CATTCTCAAG TAGAGATACA TTGTACTCTA 114171 .......... .......... .......... .......... .......... .......... 308 GTCTCATTTT CAAGTAGAGC TACTTCTTAT AACATACTCA CTCGGTGCTA GCGTTTGTTC 114231 .......... .......... .......... .......... .......... .......... 308 TCATAGAGTC ATTTGAATTA AAGGTTCATA TAAAGGAGTT CAAAATCTAG TTCATAACCC 114291 .......... .......... .......... .......... .......... .......... 308 AATCACATTC ACCCTACCAA AGATGTCCTC TAGGAATACC ATAGAATTGC GACAAAGATA 114351 .......... .......... .......... .......... .......... .......... 308 GATCATTATG ACTTTCCTAA GGATGATATG ATGTCGTTCA ACCAATCAAC CCTAAGTCAT 114411 .......... .......... .......... .......... .......... .......... 308 TCATTACATG AAGGATACCA TTACGATTTT TTACTTTCAC ATTCATAACC TTACCACTAG 114471 .......... .......... .......... .......... .......... .......... 308 GTTTAAGGTT CCACGCATAT GACCTTCGTA ACATAATTCA AGGTCTCACA TATAATTCAT 114531 .......... .......... .......... .......... .......... .......... 308 TCATACATGA CAAGGGTGCA CTAAGATTAC CTAGTAAAGA CATCTTACAT TCACATATCA 114591 .......... .......... .......... .......... .......... .......... 308 TTCATATATC AAGTAAGGGA CACAAGTCTA CCAAAACTAG ACACAATATT CTGTACTTTA 114651 .......... .......... .......... .......... .......... .......... 308 TTACATATAG CATATCATTC TTTGAAGCAC TCAGGAATAA CCCTTATCAT CTTTATGTAA 114711 .......... .......... .......... .......... .......... .......... 308 TCCTATACAT TATTATAACA TCATAATTAT AACCATCATA GACTCATATA GTCAAGTAGG 114771 .......... .......... .......... .......... .......... .......... 308 AACAATCATG CATCAACTCT AAGACTACAC ACCCAAGCAC ATAGTCATAG TCTAAATGAC 114831 .......... .......... .......... .......... .......... .......... 308 CACCTAACAT CAATAGAAGA ATATATACTT TCACATTGAT CACATGTAGA TATATATGCT 114891 .......... .......... .......... .......... .......... .......... 308 CATACTTCAC ATAAATAAAC TACACAAATC ATCATAATAC TTCAATTAGT TTGCCGATGA 114951 .......... .......... .......... .......... .......... .......... 308 GGCCATGATC ATCATAATAC ATAAAGTAAC ACCGACAAGG CCATATCAAT TGCAAGTAAA 115011 .......... .......... .......... .......... .......... .......... 308 CCACATAGCA CCGACACCAT AAGCGTACAA TACCAATTAC AACATAATTG AATTATAATT 115071 .......... .......... .......... .......... .......... .......... 308 AATATAAAAT AAAGAGAATT ATGGAAGCAT ACCACCAATA CATTCTCCCC ACTTCAATCC 115131 .......... .......... .......... .......... .......... .......... 308 ATACCTAATA ATCCAATTCA ATACCATAAG GCCATTACCA ATGTCTATGA ATAATAATTC 115191 .......... .......... .......... .......... .......... .......... 308 AATACAAAAC TATAATATTC AATGAATCTA GGTCAATTCA ATATATGTTT AGCAATATAA 115251 .......... .......... .......... .......... .......... .......... 308 GACCAATTAG ACATCAATTA AATACAATTA TTACATCATT CAATAGCCCA TAGAAAACTA 115311 .......... .......... .......... .......... .......... .......... 308 CACTAGAATT CATAAGCATT AAGTCAATAT CACTTAACCC ATAAGTAGTC AAAAACTAGG 115371 .......... .......... .......... .......... .......... .......... 308 ATTCATCAAT TACATGGGTT CATAGGCTAA TTGAGTTAGA ATCATATAAT TAACAAATAT 115431 .......... .......... .......... .......... .......... .......... 308 TCAATCAATA TACAATGATT TAAAACCTTT AATGCAAGAA CCTACGGATA GATAATAAAA 115491 .......... .......... .......... .......... .......... .......... 308 TTAGACAATT CATCTTTGAA AACTTTAGAA AACTCTTTGA ATGTTGGGCT CCTTAATTAA 115551 .......... .......... .......... .......... .......... .......... 308 TAAAGTTTCA AGGATAACAA ATCATACCTC AATGATGTTA TTCCACCAAT TTGATGAATA 115611 .......... .......... .......... .......... .......... .......... 308 ATCACCACTC AATTATCCAA TCCAAGCTCT TCCTTGAGTT TTGTTCCAAT AGAGTTCTAG 115671 .......... .......... .......... .......... .......... .......... 308 AGAATTTCTA AGGGAATTTG GGTTTTGATT TTGAAGAATG AATTCTTCTG AATGTAAAAG 115731 .......... .......... .......... .......... .......... .......... 308 GCTAATAAAC ATGTTTAGAA TACCCAAAAT ACCCCAACCA ACAGACTGTT CTGTTGGTCT 115791 .......... .......... .......... .......... .......... .......... 308 ATTGTTTGGG ATTGAGGCTG GTACTTGGCT TGGTCATTTC CCACTCCTAA GTACTGACCA 115851 .......... .......... .......... .......... .......... .......... 308 TGACACCCAT CGACGGGGCA TCAACTGTCC CACGAGCCGT CTACTAACTC TGTCGTTTGG 115911 .......... .......... .......... .......... .......... .......... 308 GGCTGTCTTG GCTTCAAGGA AAGGGTCCTT CCTCAAGGAC CCTTGGTTGG TCCTTGGGGA 115971 .......... .......... .......... .......... .......... .......... 308 CTTTCACCCA GACGTTTACA CTCCAAATAT GTTTATATAC AAGTTTATTA CCTCTCACAT 116031 .......... .......... .......... .......... .......... .......... 308 GAATTTCATA AAAAACGAAC TCGTAAAACT CAACGAATCA TTCCAAGACA CACAAGGTCG 116091 .......... .......... .......... .......... .......... .......... 308 TTTCAAGGAA AACCTTTTGA ATATTATAGA CGTTCTTGGA CATTTGACCT CCAAACTTCA 116151 .......... .......... .......... .......... .......... .......... 308 CGAAACTTGA CGTGTTGACT ATAAACACTA TATTAACTCC TAATAAGAAC CTCATTAATT 116211 .......... .......... .......... .......... .......... .......... 308 CAGAAAACAC ACATATAGAC ACATAATCAC ACATGAGGCA CATATGTGCC TTAGTTGTCC 116271 .......... .......... .......... .......... .......... .......... 308 AACGTCTTAG TCATCCCTTG ATGTTTGACT TCTAATGCAC CTAAACTCTT AGACACTGCC 116331 .......... .......... .......... .......... .......... .......... 308 TCAATATCAA ATTATAAAAC ATTTTAGGAC CTTAGACCAT CGTGAAAACC ATGTTAGGAT 116391 .......... .......... .......... .......... .......... .......... 308 CAAGCTTCGC CTAAGTCATT TTCAAGGTAT TACAATTCCA TTACTCTCTA TATATTCCGC 116451 |||||| | |||||||| ||||||| || .......... .......... .......... ....ATTCCA TCACTCTCTA TATATTCGGC 334 TTCCGCAACA ATTGGTATCA GAGCCAAGAT TTATCTGAGT ATGCTCTATG GTGCAGCATA 116511 |||||||||| || | TTCCGCAACA GTTTAT.... .......... .......... .......... .......... 350 GCCTGAACTT CCACATTATA AAAAGATTCA CTTTGGACAT TTAACTATTA GCTAGTAAAT 116571 .......... .......... .......... .......... .......... .......... 350 AGTATTTGTA GTAAAATGAT AGACAAGAAA ACGATGAGTC CACATTGAGT GTCAATAATA 116631 .......... .......... .......... .......... .......... .......... 350 CGTCATCATT GGCATCTTCG CTTATGACGA GAATTGTGTC AAATGTCAAA TTTGCAGTTA 116691 .......... .......... .......... .......... .......... .......... 350 AAATTTTTGA TGGATCAGGA CATTTCAGAC TGTGGTGAGG CGAGGTCCTT GATATTCTTT 116751 | |||||| || | .......... ........G- CATTTCGGAT AATA...... .......... .......... 365 TTCAACAAGG GATATATATT GCCAGTGAAG AAAAGAAACT GGACGGTGTA GGAGAAGAAG 116811 .......... .......... .......... .......... .......... .......... 365 ATTAGAAGAT TATCAATCGT GTTGCTTGCG GTACCATTCG AACTTACCTT GCAAGAGAAC 116871 .......... .......... .......... .......... .......... .......... 365 AAAAGTATCC ATACATGAAG GAAACATCTG CAAATAAATT ATGGAATTCA TTGGAGGAAA 116931 .......... .......... .......... .......... .......... .......... 365 AAATCTTAAA GAAATACAGT CAAAATAAAC TTAAACATGA AAAGAAGACT GTTACGCTTC 116991 .......... .......... .......... .......... .......... .......... 365 ACTTATATTC CTTGTAGCAC AATGAATGAT CATATAACCA TCTTTAATAA GTTG 117045 | | || || || | |||| ||| ||||| ||| .......... .......CTC AAAGATGGAA ATTTTAACAT ACTTAAATAA TTTG 402 hqPGS_C01HBa0163B20.1+_SGN-U337018+ (112311 112514,116426 116467) ******************************************************************************** EST sequence 31 +strand 670 n (File: SGN-U320105+) 1 TCTCCTTAAG GCATTTGTTC TTCTTTCTCT CTTGTAGTAT TTCACTTGTA CTCTTTTGGA 61 GTGAAATAAA TATTGGTTGG TTGTGTCCGA GGAGTAGGCA AAAGAAAACA AAAGTTTGCC 121 GAACCTCGTT AATTCTTGGT GTTCTTTCTC TTGTTGTCTC ATTTACTATT TATTAGTTAC 181 CTTTAGATAT AGTAGTTGTG ATTCCATCAC TCTCTATATA TTCGGCTTCC GCAACATCAG 241 AGATATCACA TCCTTATGAG TTTACATTAT TCTTAGAGAA GCAAAAATTA CTGTGACAAA 301 TGAATAAGAT AGCTAATTAG ATTTCCTCTT TCTAAAGTGT CCACAACTTA AGCCCCTTGT 361 TATGCCTTCT TGGGACAAAA TTAAAAAGCG AACAATGAGC AGGGATATTC ATATATGGAA 421 AGATCTTGAA TCACTAACAA TGCAAAGGAT AAATAATCAT GCACGTGTCA TCGAGAAAAT 481 TGGAAGGAGT TGCAAAAATA TTTCCAAGCT CAAAGTTGTG GGGCCCTATG ATATGCTCTT 541 TGCATCTACA TTGGATTCAT TTCTTCAAAA CTTGGAATTA TTGAGTCTGA GGTGCATAGT 601 GTTATCTAAA CCTTCTCTGA CTCTAATCTT GGGAGAGTTA AAAAAAGTTG AAAGTGCTCA 661 ACATATCTCA Predicted gene structure (within gDNA segment 111238 to 117788): Exon 1 112316 112514 ( 199 n); cDNA 1 200 ( 200 n); score: 0.897 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 2 116426 116465 ( 40 n); cDNA 201 239 ( 39 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 3 116710 116730 ( 21 n); cDNA 240 260 ( 21 n); score: 0.619 MATCH C01HBa0163B20.1+ SGN-U320105+ 0.897 260 0.388 C PGS_C01HBa0163B20.1+_SGN-U320105+ (112316 112514,116426 116465,116710 116730) Alignment (genomic DNA sequence = upper lines): TCTCC-TAAT ACATTTGTTC TTCTTCCCAT CTTGTAGTAT TTTACTTGTA ATTTTTTGGA 112374 ||||| ||| ||||||||| ||||| | | |||||||||| || ||||||| | ||||||| TCTCCTTAAG GCATTTGTTC TTCTTTCTCT CTTGTAGTAT TTCACTTGTA CTCTTTTGGA 60 GTGAAATAAA TATTGGTTGG TTGTGTCCGA GGAGTAGGCA AAAGAAAATA AAATTTTACC 112434 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ||| ||| || GTGAAATAAA TATTGGTTGG TTGTGTCCGA GGAGTAGGCA AAAGAAAACA AAAGTTTGCC 120 GAACCTCGTT AATTCTTGGT ATTCCTTTTA TTGTTGTCTT ATTTACTATT TATTAGCTAC 112494 |||||||||| |||||||||| ||| || | ||||||||| |||||||||| |||||| ||| GAACCTCGTT AATTCTTGGT GTTCTTTCTC TTGTTGTCTC ATTTACTATT TATTAGTTAC 180 CTTTAGTTAT AGTAGTTGTG ATTCATGTCA CATCCCGAGA CCACAACCTA TAATATATGG 112554 |||||| ||| |||||||||| CTTTAGATAT AGTAGTTGTG .......... .......... .......... .......... 200 CCCTCTCGGA GTGCAACCGG CGTACTTGAC CTCTCGGAGG TCTTGTACAA GCCCTTCCAT 112614 .......... .......... .......... .......... .......... .......... 200 ATCGTTCATC ACATATAAAC ATATGAAAGT AGTGCAGAAT TAAAACTTTT GATAAACATT 112674 .......... .......... .......... .......... .......... .......... 200 CTATAATTCT TTAAAAACTC TTTCATATAA AACTCATAGG ATATACTAAG TCTCATTTCA 112734 .......... .......... .......... .......... .......... .......... 200 TCAAATCTTA GACACAAGAG TACTTTGGGG CATGGCCCAT AGACAATAGA AATACAATAT 112794 .......... .......... .......... .......... .......... .......... 200 TACTAAGTCT ATTACAATAG TTTGATAAGG GAAATAAAAG ACATTTATGC CCTCGAGTCA 112854 .......... .......... .......... .......... .......... .......... 200 AATGAGGACA TACTTCAACT AGCTTGAACA ATCTTCTAAT CCAAGTTTTG CTCTCCAAAA 112914 .......... .......... .......... .......... .......... .......... 200 GCACCTTCAC CTATGAATCA CTTTAGAGAT AGATAAAATC ATGGAATTAG TACAATCACA 112974 .......... .......... .......... .......... .......... .......... 200 TTTATTAAGT ATGACATAAT ACATAAAAAT CATGAAAATG GACATTTGTT GAAAATATGC 113034 .......... .......... .......... .......... .......... .......... 200 ATCATTTGAT TTAAATATCA TAATAACAAC ATTTAACAAC TTAGAAACAC ATAAGAAATT 113094 .......... .......... .......... .......... .......... .......... 200 AATTAGCCAA TTTATCACAT TTTTAAGGCA ACTTTACGAT GAACTACTTC ACTGTACAGT 113154 .......... .......... .......... .......... .......... .......... 200 GAACTCCTTC ACTATTACAG TGAAGTTTCT TACCTTCACT TTAGACACCT TCTATCATGT 113214 .......... .......... .......... .......... .......... .......... 200 AATCCTCTCA CTAAAAGCTA TCCTAAAACT CATTTAAGTA AGACAAAGAG AGATCGCTCA 113274 .......... .......... .......... .......... .......... .......... 200 TACAACCTCT CTAGGCACAC CTAAATGATC TTTAAGACCA CCTATAATGA GATCAACACA 113334 .......... .......... .......... .......... .......... .......... 200 CACTTACAAG ACACCAAACA TATGAACATG AGATTCTTCT ACCAAAGGTG ATTCAAAGTC 113394 .......... .......... .......... .......... .......... .......... 200 TCACTTGAGT GTATTGTGAA GCGACCGCCC ATACAATCCC TTACACACAC TTAAGATATC 113454 .......... .......... .......... .......... .......... .......... 200 TTATAGACTA CCTAAGATAG AATCCTTCTA ACTTAATACA ACAACATATA GATGATATGA 113514 .......... .......... .......... .......... .......... .......... 200 CATTCTCCTT CCAAAGGCTA TCAAAATACT TACTTAAGTA AATCAAGAAG ATAACGTTCA 113574 .......... .......... .......... .......... .......... .......... 200 TATTGACCTA TTCAAGATTA CCAAAATAAT CTTTAAGACT ACCTAAGGCT TAGATCATGT 113634 .......... .......... .......... .......... .......... .......... 200 CTACATAATC AACCATCTTC CCTAAGTAGA GTCATTCTTA GGACTTATCT AGGTAAGATA 113694 .......... .......... .......... .......... .......... .......... 200 CGAAGTGACC ATTCTTATGC CCCCTTCACA CCTTAACTAG ACAACTATTA ACTACTATAG 113754 .......... .......... .......... .......... .......... .......... 200 ATAAGTACTT ATTCATTTAA CATACTTTCT TAACTTAATT CATTACATTC ATTTAAGACT 113814 .......... .......... .......... .......... .......... .......... 200 CATTCATCAC ATAAGGACAT TCAAGTAATG GTCTTGGACA ACACCTAGGG ACTCTAACTA 113874 .......... .......... .......... .......... .......... .......... 200 ACATCTTCAA AACTAACATC TTCAAAGTCT ATTGTGCAAT GTCTAGATAG TATCTCATAC 113934 .......... .......... .......... .......... .......... .......... 200 CATCACCTAA ACTTCATTGA ACTTCTCTAA TGCTAGTAGG TATCCCATAT GATAAGAATA 113994 .......... .......... .......... .......... .......... .......... 200 AACAATAAAC AACATAGAAA ATGATAGATA AATTTGGAGT TCTAACCTAC TCCAATGAGG 114054 .......... .......... .......... .......... .......... .......... 200 GTGTTCTACT TGCCAAGTGT AGAAGTAGCA CACATCCATG TAGGCACATA ACAATAAGGA 114114 .......... .......... .......... .......... .......... .......... 200 ATATGACGGG CTTTTATGCA CTCTAGTCAT TCTCAAGTAG AGATACATTG TACTCTAGTC 114174 .......... .......... .......... .......... .......... .......... 200 TCATTTTCAA GTAGAGCTAC TTCTTATAAC ATACTCACTC GGTGCTAGCG TTTGTTCTCA 114234 .......... .......... .......... .......... .......... .......... 200 TAGAGTCATT TGAATTAAAG GTTCATATAA AGGAGTTCAA AATCTAGTTC ATAACCCAAT 114294 .......... .......... .......... .......... .......... .......... 200 CACATTCACC CTACCAAAGA TGTCCTCTAG GAATACCATA GAATTGCGAC AAAGATAGAT 114354 .......... .......... .......... .......... .......... .......... 200 CATTATGACT TTCCTAAGGA TGATATGATG TCGTTCAACC AATCAACCCT AAGTCATTCA 114414 .......... .......... .......... .......... .......... .......... 200 TTACATGAAG GATACCATTA CGATTTTTTA CTTTCACATT CATAACCTTA CCACTAGGTT 114474 .......... .......... .......... .......... .......... .......... 200 TAAGGTTCCA CGCATATGAC CTTCGTAACA TAATTCAAGG TCTCACATAT AATTCATTCA 114534 .......... .......... .......... .......... .......... .......... 200 TACATGACAA GGGTGCACTA AGATTACCTA GTAAAGACAT CTTACATTCA CATATCATTC 114594 .......... .......... .......... .......... .......... .......... 200 ATATATCAAG TAAGGGACAC AAGTCTACCA AAACTAGACA CAATATTCTG TACTTTATTA 114654 .......... .......... .......... .......... .......... .......... 200 CATATAGCAT ATCATTCTTT GAAGCACTCA GGAATAACCC TTATCATCTT TATGTAATCC 114714 .......... .......... .......... .......... .......... .......... 200 TATACATTAT TATAACATCA TAATTATAAC CATCATAGAC TCATATAGTC AAGTAGGAAC 114774 .......... .......... .......... .......... .......... .......... 200 AATCATGCAT CAACTCTAAG ACTACACACC CAAGCACATA GTCATAGTCT AAATGACCAC 114834 .......... .......... .......... .......... .......... .......... 200 CTAACATCAA TAGAAGAATA TATACTTTCA CATTGATCAC ATGTAGATAT ATATGCTCAT 114894 .......... .......... .......... .......... .......... .......... 200 ACTTCACATA AATAAACTAC ACAAATCATC ATAATACTTC AATTAGTTTG CCGATGAGGC 114954 .......... .......... .......... .......... .......... .......... 200 CATGATCATC ATAATACATA AAGTAACACC GACAAGGCCA TATCAATTGC AAGTAAACCA 115014 .......... .......... .......... .......... .......... .......... 200 CATAGCACCG ACACCATAAG CGTACAATAC CAATTACAAC ATAATTGAAT TATAATTAAT 115074 .......... .......... .......... .......... .......... .......... 200 ATAAAATAAA GAGAATTATG GAAGCATACC ACCAATACAT TCTCCCCACT TCAATCCATA 115134 .......... .......... .......... .......... .......... .......... 200 CCTAATAATC CAATTCAATA CCATAAGGCC ATTACCAATG TCTATGAATA ATAATTCAAT 115194 .......... .......... .......... .......... .......... .......... 200 ACAAAACTAT AATATTCAAT GAATCTAGGT CAATTCAATA TATGTTTAGC AATATAAGAC 115254 .......... .......... .......... .......... .......... .......... 200 CAATTAGACA TCAATTAAAT ACAATTATTA CATCATTCAA TAGCCCATAG AAAACTACAC 115314 .......... .......... .......... .......... .......... .......... 200 TAGAATTCAT AAGCATTAAG TCAATATCAC TTAACCCATA AGTAGTCAAA AACTAGGATT 115374 .......... .......... .......... .......... .......... .......... 200 CATCAATTAC ATGGGTTCAT AGGCTAATTG AGTTAGAATC ATATAATTAA CAAATATTCA 115434 .......... .......... .......... .......... .......... .......... 200 ATCAATATAC AATGATTTAA AACCTTTAAT GCAAGAACCT ACGGATAGAT AATAAAATTA 115494 .......... .......... .......... .......... .......... .......... 200 GACAATTCAT CTTTGAAAAC TTTAGAAAAC TCTTTGAATG TTGGGCTCCT TAATTAATAA 115554 .......... .......... .......... .......... .......... .......... 200 AGTTTCAAGG ATAACAAATC ATACCTCAAT GATGTTATTC CACCAATTTG ATGAATAATC 115614 .......... .......... .......... .......... .......... .......... 200 ACCACTCAAT TATCCAATCC AAGCTCTTCC TTGAGTTTTG TTCCAATAGA GTTCTAGAGA 115674 .......... .......... .......... .......... .......... .......... 200 ATTTCTAAGG GAATTTGGGT TTTGATTTTG AAGAATGAAT TCTTCTGAAT GTAAAAGGCT 115734 .......... .......... .......... .......... .......... .......... 200 AATAAACATG TTTAGAATAC CCAAAATACC CCAACCAACA GACTGTTCTG TTGGTCTATT 115794 .......... .......... .......... .......... .......... .......... 200 GTTTGGGATT GAGGCTGGTA CTTGGCTTGG TCATTTCCCA CTCCTAAGTA CTGACCATGA 115854 .......... .......... .......... .......... .......... .......... 200 CACCCATCGA CGGGGCATCA ACTGTCCCAC GAGCCGTCTA CTAACTCTGT CGTTTGGGGC 115914 .......... .......... .......... .......... .......... .......... 200 TGTCTTGGCT TCAAGGAAAG GGTCCTTCCT CAAGGACCCT TGGTTGGTCC TTGGGGACTT 115974 .......... .......... .......... .......... .......... .......... 200 TCACCCAGAC GTTTACACTC CAAATATGTT TATATACAAG TTTATTACCT CTCACATGAA 116034 .......... .......... .......... .......... .......... .......... 200 TTTCATAAAA AACGAACTCG TAAAACTCAA CGAATCATTC CAAGACACAC AAGGTCGTTT 116094 .......... .......... .......... .......... .......... .......... 200 CAAGGAAAAC CTTTTGAATA TTATAGACGT TCTTGGACAT TTGACCTCCA AACTTCACGA 116154 .......... .......... .......... .......... .......... .......... 200 AACTTGACGT GTTGACTATA AACACTATAT TAACTCCTAA TAAGAACCTC ATTAATTCAG 116214 .......... .......... .......... .......... .......... .......... 200 AAAACACACA TATAGACACA TAATCACACA TGAGGCACAT ATGTGCCTTA GTTGTCCAAC 116274 .......... .......... .......... .......... .......... .......... 200 GTCTTAGTCA TCCCTTGATG TTTGACTTCT AATGCACCTA AACTCTTAGA CACTGCCTCA 116334 .......... .......... .......... .......... .......... .......... 200 ATATCAAATT ATAAAACATT TTAGGACCTT AGACCATCGT GAAAACCATG TTAGGATCAA 116394 .......... .......... .......... .......... .......... .......... 200 GCTTCGCCTA AGTCATTTTC AAGGTATTAC AATTCCATTA CTCTCTATAT ATTCCGCTTC 116454 ||||||| | |||||||||| |||| ||||| .......... .......... .......... .ATTCCATCA CTCTCTATAT ATTCGGCTTC 229 CGCAACAATT GGTATCAGAG CCAAGATTTA TCTGAGTATG CTCTATGGTG CAGCATAGCC 116514 |||||| || CGCAAC-ATC A......... .......... .......... .......... .......... 239 TGAACTTCCA CATTATAAAA AGATTCACTT TGGACATTTA ACTATTAGCT AGTAAATAGT 116574 .......... .......... .......... .......... .......... .......... 239 ATTTGTAGTA AAATGATAGA CAAGAAAACG ATGAGTCCAC ATTGAGTGTC AATAATACGT 116634 .......... .......... .......... .......... .......... .......... 239 CATCATTGGC ATCTTCGCTT ATGACGAGAA TTGTGTCAAA TGTCAAATTT GCAGTTAAAA 116694 .......... .......... .......... .......... .......... .......... 239 TTTTTGATGG ATCAGGACAT TTCAGACTGT GGTGAG 116730 || || ||| | | |||| .......... .....GAGAT ATCACATCCT TATGAG 260 hqPGS_C01HBa0163B20.1+_SGN-U320105+ (112316 112514,116426 116465,116710 116730) ******************************************************************************** EST sequence 17 +strand 1170 n (File: SGN-U337019+) 1 AAAAGGGAGG TATTCACAGG GGGTGGCGGC CGCTCTAGAA CTAGTGGATC CCCCGGGCTG 61 CAGGAATTCG GCACGACGCT CCTTAAGGCA TTTGTTCTTC TTTCTCTCTT GTAGTATTTC 121 ACTTGTACTC TTTTGGAGTG AAATAAATAT TGGTTGGTTG TGTCCGAGGA GTAGGCAAAA 181 GAAAACAAAA GTTTGCCGAA CCTCGTTAAT TCTTGGTGTT CTTTCTCTTG TTGTCTCATT 241 TACTATTTAT TAGTTACCTT TAGATATAGT AGTTGTGATT CCATCACTCT CTATATATTC 301 GGCTTCCGCA ACATCAGAGA TATCACATCC TTATGAGTTT ACATTATTCT TAGAGAAGCA 361 AAAATTACTG TGACAAATGA ATAAGATAGC TAATTAGATT TCCTCTTTCT AAAGTGTCCA 421 CAACTTAAGC CCCTTGTTAT GCCTTCTTGG GACAAAATTA AAAAGCGAAC AATGAGCAGG 481 GATATTCATA TATGGAAAGA TCTTGAATCA CTAACAATGC AAAGGATAAA TAATCATGCA 541 CGTGTCATCG AGAAAATTGG AAGGAGTTGC AAAAATATTT CCAAGCTCAA AGTTGTGGGG 601 CCCTATGATA TGCTCTTTGC ATCTACATTG GATTCATTTC TTCAAAACTT GGAATTATTG 661 AGTCTGAGGT GCATAGTGTT ATCTAAACCT TCTCTGACTC TAATCTTGGA GGAGTTAAAA 721 AAAGTTGAAA GTGCTCAACA TATCTCATTA CATAATTTGA AGACCCTCCC CTCGAGCCGA 781 TGAAAATTCT GACCGAGCTT GATGAATCAA TTCTTGAAAA AACGTCTAGG TTAAATAAAT 841 TTCCTAACCT GCATGAGTGA CTCATGCATC ATGTGTCAGC GCGCTTCTAA TGATCAAGGG 901 TTTATGAGGT GGTATAAGTA TGAAGAAGAC CTCTGGAAAG TGGATGAGGA AAATCTCTTG 961 CAATTTGACA ACTTTAAAAA AAAATTGCCT CATCCCCTAA AAGGTGTGGA GAAAATGTGG 1021 AAACTTTGGG AATTAAAAAA TCTTAAAACC CAGGTTCCAA AGGGAAAAAC TAATCCAATG 1081 AATGATTTTT TGGTGAAAAT GGGCCTTTTT TTTTTTCCCC CCCCCTATGA ATGGGGAAGG 1141 CTTTATTTTC CTGGGATGTT TGGGGAAGGT Predicted gene structure (within gDNA segment 110468 to 122018): Exon 1 112321 112514 ( 194 n); cDNA 84 277 ( 194 n); score: 0.907 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 2 116426 116465 ( 40 n); cDNA 278 316 ( 39 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 3 116710 116730 ( 21 n); cDNA 317 337 ( 21 n); score: 0.619 Intron 3 116731 119497 (2767 n); Pd: 0.947 (s: 0), Pa: 0.632 (s: 0) Exon 4 119498 119515 ( 18 n); cDNA 338 355 ( 18 n); score: 0.500 Intron 4 119516 121008 (1493 n); Pd: 0.618 (s: 0), Pa: 0.000 (s: 0) Exon 5 121009 121018 ( 10 n); cDNA 356 365 ( 10 n); score: 0.900 MATCH C01HBa0163B20.1+ SGN-U337019+ 0.907 283 0.242 C PGS_C01HBa0163B20.1+_SGN-U337019+ (112321 112514,116426 116465,116710 116730,119498 119515,121009 121018) Alignment (genomic DNA sequence = upper lines): TAATACATTT GTTCTTCTTC CCATCTTGTA GTATTTTACT TGTAATTTTT TGGAGTGAAA 112380 ||| ||||| ||||||||| | ||||||| |||||| ||| |||| | ||| |||||||||| TAAGGCATTT GTTCTTCTTT CTCTCTTGTA GTATTTCACT TGTACTCTTT TGGAGTGAAA 143 TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AATAAAATTT TACCGAACCT 112440 |||||||||| |||||||||| |||||||||| |||||||||| || |||| || | |||||||| TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AACAAAAGTT TGCCGAACCT 203 CGTTAATTCT TGGTATTCCT TTTATTGTTG TCTTATTTAC TATTTATTAG CTACCTTTAG 112500 |||||||||| |||| ||| | | | |||||| ||| |||||| |||||||||| ||||||||| CGTTAATTCT TGGTGTTCTT TCTCTTGTTG TCTCATTTAC TATTTATTAG TTACCTTTAG 263 TTATAGTAGT TGTGATTCAT GTCACATCCC GAGACCACAA CCTATAATAT ATGGCCCTCT 112560 ||||||||| |||| ATATAGTAGT TGTG...... .......... .......... .......... .......... 277 CGGAGTGCAA CCGGCGTACT TGACCTCTCG GAGGTCTTGT ACAAGCCCTT CCATATCGTT 112620 .......... .......... .......... .......... .......... .......... 277 CATCACATAT AAACATATGA AAGTAGTGCA GAATTAAAAC TTTTGATAAA CATTCTATAA 112680 .......... .......... .......... .......... .......... .......... 277 TTCTTTAAAA ACTCTTTCAT ATAAAACTCA TAGGATATAC TAAGTCTCAT TTCATCAAAT 112740 .......... .......... .......... .......... .......... .......... 277 CTTAGACACA AGAGTACTTT GGGGCATGGC CCATAGACAA TAGAAATACA ATATTACTAA 112800 .......... .......... .......... .......... .......... .......... 277 GTCTATTACA ATAGTTTGAT AAGGGAAATA AAAGACATTT ATGCCCTCGA GTCAAATGAG 112860 .......... .......... .......... .......... .......... .......... 277 GACATACTTC AACTAGCTTG AACAATCTTC TAATCCAAGT TTTGCTCTCC AAAAGCACCT 112920 .......... .......... .......... .......... .......... .......... 277 TCACCTATGA ATCACTTTAG AGATAGATAA AATCATGGAA TTAGTACAAT CACATTTATT 112980 .......... .......... .......... .......... .......... .......... 277 AAGTATGACA TAATACATAA AAATCATGAA AATGGACATT TGTTGAAAAT ATGCATCATT 113040 .......... .......... .......... .......... .......... .......... 277 TGATTTAAAT ATCATAATAA CAACATTTAA CAACTTAGAA ACACATAAGA AATTAATTAG 113100 .......... .......... .......... .......... .......... .......... 277 CCAATTTATC ACATTTTTAA GGCAACTTTA CGATGAACTA CTTCACTGTA CAGTGAACTC 113160 .......... .......... .......... .......... .......... .......... 277 CTTCACTATT ACAGTGAAGT TTCTTACCTT CACTTTAGAC ACCTTCTATC ATGTAATCCT 113220 .......... .......... .......... .......... .......... .......... 277 CTCACTAAAA GCTATCCTAA AACTCATTTA AGTAAGACAA AGAGAGATCG CTCATACAAC 113280 .......... .......... .......... .......... .......... .......... 277 CTCTCTAGGC ACACCTAAAT GATCTTTAAG ACCACCTATA ATGAGATCAA CACACACTTA 113340 .......... .......... .......... .......... .......... .......... 277 CAAGACACCA AACATATGAA CATGAGATTC TTCTACCAAA GGTGATTCAA AGTCTCACTT 113400 .......... .......... .......... .......... .......... .......... 277 GAGTGTATTG TGAAGCGACC GCCCATACAA TCCCTTACAC ACACTTAAGA TATCTTATAG 113460 .......... .......... .......... .......... .......... .......... 277 ACTACCTAAG ATAGAATCCT TCTAACTTAA TACAACAACA TATAGATGAT ATGACATTCT 113520 .......... .......... .......... .......... .......... .......... 277 CCTTCCAAAG GCTATCAAAA TACTTACTTA AGTAAATCAA GAAGATAACG TTCATATTGA 113580 .......... .......... .......... .......... .......... .......... 277 CCTATTCAAG ATTACCAAAA TAATCTTTAA GACTACCTAA GGCTTAGATC ATGTCTACAT 113640 .......... .......... .......... .......... .......... .......... 277 AATCAACCAT CTTCCCTAAG TAGAGTCATT CTTAGGACTT ATCTAGGTAA GATACGAAGT 113700 .......... .......... .......... .......... .......... .......... 277 GACCATTCTT ATGCCCCCTT CACACCTTAA CTAGACAACT ATTAACTACT ATAGATAAGT 113760 .......... .......... .......... .......... .......... .......... 277 ACTTATTCAT TTAACATACT TTCTTAACTT AATTCATTAC ATTCATTTAA GACTCATTCA 113820 .......... .......... .......... .......... .......... .......... 277 TCACATAAGG ACATTCAAGT AATGGTCTTG GACAACACCT AGGGACTCTA ACTAACATCT 113880 .......... .......... .......... .......... .......... .......... 277 TCAAAACTAA CATCTTCAAA GTCTATTGTG CAATGTCTAG ATAGTATCTC ATACCATCAC 113940 .......... .......... .......... .......... .......... .......... 277 CTAAACTTCA TTGAACTTCT CTAATGCTAG TAGGTATCCC ATATGATAAG AATAAACAAT 114000 .......... .......... .......... .......... .......... .......... 277 AAACAACATA GAAAATGATA GATAAATTTG GAGTTCTAAC CTACTCCAAT GAGGGTGTTC 114060 .......... .......... .......... .......... .......... .......... 277 TACTTGCCAA GTGTAGAAGT AGCACACATC CATGTAGGCA CATAACAATA AGGAATATGA 114120 .......... .......... .......... .......... .......... .......... 277 CGGGCTTTTA TGCACTCTAG TCATTCTCAA GTAGAGATAC ATTGTACTCT AGTCTCATTT 114180 .......... .......... .......... .......... .......... .......... 277 TCAAGTAGAG CTACTTCTTA TAACATACTC ACTCGGTGCT AGCGTTTGTT CTCATAGAGT 114240 .......... .......... .......... .......... .......... .......... 277 CATTTGAATT AAAGGTTCAT ATAAAGGAGT TCAAAATCTA GTTCATAACC CAATCACATT 114300 .......... .......... .......... .......... .......... .......... 277 CACCCTACCA AAGATGTCCT CTAGGAATAC CATAGAATTG CGACAAAGAT AGATCATTAT 114360 .......... .......... .......... .......... .......... .......... 277 GACTTTCCTA AGGATGATAT GATGTCGTTC AACCAATCAA CCCTAAGTCA TTCATTACAT 114420 .......... .......... .......... .......... .......... .......... 277 GAAGGATACC ATTACGATTT TTTACTTTCA CATTCATAAC CTTACCACTA GGTTTAAGGT 114480 .......... .......... .......... .......... .......... .......... 277 TCCACGCATA TGACCTTCGT AACATAATTC AAGGTCTCAC ATATAATTCA TTCATACATG 114540 .......... .......... .......... .......... .......... .......... 277 ACAAGGGTGC ACTAAGATTA CCTAGTAAAG ACATCTTACA TTCACATATC ATTCATATAT 114600 .......... .......... .......... .......... .......... .......... 277 CAAGTAAGGG ACACAAGTCT ACCAAAACTA GACACAATAT TCTGTACTTT ATTACATATA 114660 .......... .......... .......... .......... .......... .......... 277 GCATATCATT CTTTGAAGCA CTCAGGAATA ACCCTTATCA TCTTTATGTA ATCCTATACA 114720 .......... .......... .......... .......... .......... .......... 277 TTATTATAAC ATCATAATTA TAACCATCAT AGACTCATAT AGTCAAGTAG GAACAATCAT 114780 .......... .......... .......... .......... .......... .......... 277 GCATCAACTC TAAGACTACA CACCCAAGCA CATAGTCATA GTCTAAATGA CCACCTAACA 114840 .......... .......... .......... .......... .......... .......... 277 TCAATAGAAG AATATATACT TTCACATTGA TCACATGTAG ATATATATGC TCATACTTCA 114900 .......... .......... .......... .......... .......... .......... 277 CATAAATAAA CTACACAAAT CATCATAATA CTTCAATTAG TTTGCCGATG AGGCCATGAT 114960 .......... .......... .......... .......... .......... .......... 277 CATCATAATA CATAAAGTAA CACCGACAAG GCCATATCAA TTGCAAGTAA ACCACATAGC 115020 .......... .......... .......... .......... .......... .......... 277 ACCGACACCA TAAGCGTACA ATACCAATTA CAACATAATT GAATTATAAT TAATATAAAA 115080 .......... .......... .......... .......... .......... .......... 277 TAAAGAGAAT TATGGAAGCA TACCACCAAT ACATTCTCCC CACTTCAATC CATACCTAAT 115140 .......... .......... .......... .......... .......... .......... 277 AATCCAATTC AATACCATAA GGCCATTACC AATGTCTATG AATAATAATT CAATACAAAA 115200 .......... .......... .......... .......... .......... .......... 277 CTATAATATT CAATGAATCT AGGTCAATTC AATATATGTT TAGCAATATA AGACCAATTA 115260 .......... .......... .......... .......... .......... .......... 277 GACATCAATT AAATACAATT ATTACATCAT TCAATAGCCC ATAGAAAACT ACACTAGAAT 115320 .......... .......... .......... .......... .......... .......... 277 TCATAAGCAT TAAGTCAATA TCACTTAACC CATAAGTAGT CAAAAACTAG GATTCATCAA 115380 .......... .......... .......... .......... .......... .......... 277 TTACATGGGT TCATAGGCTA ATTGAGTTAG AATCATATAA TTAACAAATA TTCAATCAAT 115440 .......... .......... .......... .......... .......... .......... 277 ATACAATGAT TTAAAACCTT TAATGCAAGA ACCTACGGAT AGATAATAAA ATTAGACAAT 115500 .......... .......... .......... .......... .......... .......... 277 TCATCTTTGA AAACTTTAGA AAACTCTTTG AATGTTGGGC TCCTTAATTA ATAAAGTTTC 115560 .......... .......... .......... .......... .......... .......... 277 AAGGATAACA AATCATACCT CAATGATGTT ATTCCACCAA TTTGATGAAT AATCACCACT 115620 .......... .......... .......... .......... .......... .......... 277 CAATTATCCA ATCCAAGCTC TTCCTTGAGT TTTGTTCCAA TAGAGTTCTA GAGAATTTCT 115680 .......... .......... .......... .......... .......... .......... 277 AAGGGAATTT GGGTTTTGAT TTTGAAGAAT GAATTCTTCT GAATGTAAAA GGCTAATAAA 115740 .......... .......... .......... .......... .......... .......... 277 CATGTTTAGA ATACCCAAAA TACCCCAACC AACAGACTGT TCTGTTGGTC TATTGTTTGG 115800 .......... .......... .......... .......... .......... .......... 277 GATTGAGGCT GGTACTTGGC TTGGTCATTT CCCACTCCTA AGTACTGACC ATGACACCCA 115860 .......... .......... .......... .......... .......... .......... 277 TCGACGGGGC ATCAACTGTC CCACGAGCCG TCTACTAACT CTGTCGTTTG GGGCTGTCTT 115920 .......... .......... .......... .......... .......... .......... 277 GGCTTCAAGG AAAGGGTCCT TCCTCAAGGA CCCTTGGTTG GTCCTTGGGG ACTTTCACCC 115980 .......... .......... .......... .......... .......... .......... 277 AGACGTTTAC ACTCCAAATA TGTTTATATA CAAGTTTATT ACCTCTCACA TGAATTTCAT 116040 .......... .......... .......... .......... .......... .......... 277 AAAAAACGAA CTCGTAAAAC TCAACGAATC ATTCCAAGAC ACACAAGGTC GTTTCAAGGA 116100 .......... .......... .......... .......... .......... .......... 277 AAACCTTTTG AATATTATAG ACGTTCTTGG ACATTTGACC TCCAAACTTC ACGAAACTTG 116160 .......... .......... .......... .......... .......... .......... 277 ACGTGTTGAC TATAAACACT ATATTAACTC CTAATAAGAA CCTCATTAAT TCAGAAAACA 116220 .......... .......... .......... .......... .......... .......... 277 CACATATAGA CACATAATCA CACATGAGGC ACATATGTGC CTTAGTTGTC CAACGTCTTA 116280 .......... .......... .......... .......... .......... .......... 277 GTCATCCCTT GATGTTTGAC TTCTAATGCA CCTAAACTCT TAGACACTGC CTCAATATCA 116340 .......... .......... .......... .......... .......... .......... 277 AATTATAAAA CATTTTAGGA CCTTAGACCA TCGTGAAAAC CATGTTAGGA TCAAGCTTCG 116400 .......... .......... .......... .......... .......... .......... 277 CCTAAGTCAT TTTCAAGGTA TTACAATTCC ATTACTCTCT ATATATTCCG CTTCCGCAAC 116460 ||||| || ||||||| |||||||| | |||||||||| .......... .......... .....ATTCC ATCACTCTCT ATATATTCGG CTTCCGCAAC 312 AATTGGTATC AGAGCCAAGA TTTATCTGAG TATGCTCTAT GGTGCAGCAT AGCCTGAACT 116520 || -ATCA..... .......... .......... .......... .......... .......... 316 TCCACATTAT AAAAAGATTC ACTTTGGACA TTTAACTATT AGCTAGTAAA TAGTATTTGT 116580 .......... .......... .......... .......... .......... .......... 316 AGTAAAATGA TAGACAAGAA AACGATGAGT CCACATTGAG TGTCAATAAT ACGTCATCAT 116640 .......... .......... .......... .......... .......... .......... 316 TGGCATCTTC GCTTATGACG AGAATTGTGT CAAATGTCAA ATTTGCAGTT AAAATTTTTG 116700 .......... .......... .......... .......... .......... .......... 316 ATGGATCAGG ACATTTCAGA CTGTGGTGAG GCGAGGTCCT TGATATTCTT TTTCAACAAG 116760 | | || ||| | | |||| .........G AGATATCACA TCCTTATGAG .......... .......... .......... 337 GGATATATAT TGCCAGTGAA GAAAAGAAAC TGGACGGTGT AGGAGAAGAA GATTAGAAGA 116820 .......... .......... .......... .......... .......... .......... 337 TTATCAATCG TGTTGCTTGC GGTACCATTC GAACTTACCT TGCAAGAGAA CAAAAGTATC 116880 .......... .......... .......... .......... .......... .......... 337 CATACATGAA GGAAACATCT GCAAATAAAT TATGGAATTC ATTGGAGGAA AAAATCTTAA 116940 .......... .......... .......... .......... .......... .......... 337 AGAAATACAG TCAAAATAAA CTTAAACATG AAAAGAAGAC TGTTACGCTT CACTTATATT 117000 .......... .......... .......... .......... .......... .......... 337 CCTTGTAGCA CAATGAATGA TCATATAACC ATCTTTAATA AGTTGGCGAT AAATTTGCGG 117060 .......... .......... .......... .......... .......... .......... 337 AATATGGATG TGACTTTTAC GGATGGATAT ATGGCCTTAA TGTTGTTAAG TTCACTTCCC 117120 .......... .......... .......... .......... .......... .......... 337 TATGAGTTCG AGCATGTTGA AACGACTCTA GTCTATGGGA ATGATGAAGT ATCTCTCAAA 117180 .......... .......... .......... .......... .......... .......... 337 GAAATTTGTT CTGCCTTATA TAGTTATATA TAAAGAAAGA GAGAAAAACA AAAAGATGGA 117240 .......... .......... .......... .......... .......... .......... 337 GAAATAGAAG CCTTCATTGT GAGAGTTCGT TCTCAAAAAT CATATGAGAA TGAAAAAAGG 117300 .......... .......... .......... .......... .......... .......... 337 GAGATCCAAG TCAAGATCCA TAATCAGCAA ATATGAATGT GCCTTTTGCC GAGAAAAAGG 117360 .......... .......... .......... .......... .......... .......... 337 GCCTTGGAAG AAAACTGCCC AAAGTTGAAT AGCAAAGCCA AACCAAATAA TGGGAAGGCT 117420 .......... .......... .......... .......... .......... .......... 337 GTCATGGATT CAAATGTGGC TGATTGTGAT GACTCTAATT ACTTACTAGT TACGATAGAT 117480 .......... .......... .......... .......... .......... .......... 337 TCATCCAAAT CATCTGATGT ATAGTTGATG GACTCAACTT GTAGCTATCA TATATGTCCG 117540 .......... .......... .......... .......... .......... .......... 337 AATCGGGACT AGTTTGTTGA TGCAAGAAGG AGAATGTGGA GTTATTCACA CCGCAAACAA 117600 .......... .......... .......... .......... .......... .......... 337 TATTCTTCTT ACTGCATTTG GTGTTGGTTT AATCCGATTA AGGAACCACG ATTATGTAGA 117660 .......... .......... .......... .......... .......... .......... 337 ACATTAATAG ATGTTCGATA TGTACCAGAT TTAAAGAAAA ATCTTTTTTT TATATAGTAG 117720 .......... .......... .......... .......... .......... .......... 337 CCCTAGAGTC AAAGGGGTTT AAAGTCATCA CAGATAATAA TGTGATGAGA ATATGCTCTG 117780 .......... .......... .......... .......... .......... .......... 337 GTGCACTAGT GGTAGCGAAG GGAATTCGAA AAAAATAACA TGTACCACTA TCAAGGTAGT 117840 .......... .......... .......... .......... .......... .......... 337 ACAGTTATTG GGACAGCGAC AACAACATCC AATGACGACA ACAAGACAAA AATGACCTAG 117900 .......... .......... .......... .......... .......... .......... 337 ATGTGACATA TGTGCTTGGG ACATGCTGGA GAAAAATCCT TGAAAACTTT ATCGGATCAA 117960 .......... .......... .......... .......... .......... .......... 337 GGATTGCTAA AAGGAGTAAA ATCTTGCAAC TTGGAGTTTT TCGAGCATTG TGTCAAGGGA 118020 .......... .......... .......... .......... .......... .......... 337 AAGCAAACAA GGGTTAAATT TTGAACAACT ATCCATAATA CTGAAGGTAC TTTGGATTAT 118080 .......... .......... .......... .......... .......... .......... 337 GTTCATTCAG ATGTTTGAGC TGCTTCCTAA ACACCTTCAT TAAGTGGGAA ACTCTATATT 118140 .......... .......... .......... .......... .......... .......... 337 GTAACGTTTG TTGATGACTT TTCTCGAAGG TTGTGGGTGT ATATGATGAA AACAAAAATG 118200 .......... .......... .......... .......... .......... .......... 337 AAGTATTGGG AATTTTCGTC AAATGGAAGG CGATGATAGA ACACAAAGTG GCAGGAAGAT 118260 .......... .......... .......... .......... .......... .......... 337 CAAGTGTCTT CGCAAAGACA GTGGTGGAGA AAATAAAAAA AATGATCATT TTTAGAAAAA 118320 .......... .......... .......... .......... .......... .......... 337 TTGTGAGGAA AATGGCATCT TTAGATATTT CAACGTCAGA AATACACCAC AACAGAATAG 118380 .......... .......... .......... .......... .......... .......... 337 AGTCGCAGAA CGCATGAATC AAACTTTGCT GGAGAAGGTT CAGTGTATGT TGTCCAATGC 118440 .......... .......... .......... .......... .......... .......... 337 TGGCTCGGGC AAAGAATTTT GGGCTGAGGC AATAATATAT GCATGTCACC TTATTAATCG 118500 .......... .......... .......... .......... .......... .......... 337 TCTACCATCT GCTTCTATTG TTGGAAAGAC ATAAAAACGG TATGGAAAAC ATGATGAATA 118560 .......... .......... .......... .......... .......... .......... 337 TTATGGTTCT TATATGTATT TGGCTCAATT ACATATTATC ATGTAAGAGA GTCAAAATTA 118620 .......... .......... .......... .......... .......... .......... 337 GACCCAAGAA CAAAGAAAGT TTTAGTTATG GAAATTACTT CTTGAGTCAA TGATACCATT 118680 .......... .......... .......... .......... .......... .......... 337 TATGGTGTCG AGAGACAAGA AAATATATTT TCAGCATGGA TGTTACCTTT GATGAATCTT 118740 .......... .......... .......... .......... .......... .......... 337 CCTCGACAAA TAAGGTAACA ATTGAAGAAG TCAAATATAT TGATGGTGCT TCAAAACAGG 118800 .......... .......... .......... .......... .......... .......... 337 TGGAGTTTAA GGGAAAGATA ATTTTCCCAA CACAGGGATC AAACGAGGAA AGAACTAAAG 118860 .......... .......... .......... .......... .......... .......... 337 ATTTTAGGAG AGTCATTCGA AAAGGAGGTT CCATCTCAAG AACCTCAACC ACAACTTGAA 118920 .......... .......... .......... .......... .......... .......... 337 TAATAGAAAC CGGCAAGACT AAACGGACAA TAAGAAAATT TTCTCGATTC ATAGATATGG 118980 .......... .......... .......... .......... .......... .......... 337 TGGCTTGTGT GGCCTCAATT GCAGCTGATG TCATTCCTAC CACTTACCAA GACGCAGTCC 119040 .......... .......... .......... .......... .......... .......... 337 AAAGTTTACA AGAAGATAAG TGGAGGATTG TCATGGATGA AGAAATGCAG GCCCTTCATC 119100 .......... .......... .......... .......... .......... .......... 337 AGAATCATAC ATGAAGATTG GCCAATCTCC TAGAGGGCAA GAAAGCAATT GGGTGCAAAT 119160 .......... .......... .......... .......... .......... .......... 337 GGGTATTTAC AAAGAAAGAA GGATTTCCTA AGAAAGACGA TATTTTCTAC AAATCAAGAT 119220 .......... .......... .......... .......... .......... .......... 337 TAGAGGAGAA AGGATACACT CAAAAAGAGG GAATTGACTA TAATGAGGTA TTTTCTCCAG 119280 .......... .......... .......... .......... .......... .......... 337 TTGTAATACT CCTCCATTAG AGTTTTGTTG GCTTTGTAGC ATAGTTGAAT TTGGAACTAG 119340 .......... .......... .......... .......... .......... .......... 337 TTAAGTTGGA TGTAATACAT GGAGACTTAG AAGAGGAAAT CTACATGACT CGTCTAGAAG 119400 .......... .......... .......... .......... .......... .......... 337 GATTCAAAGT TGATGGAAAA GAAAATATGG TGTGCAAACT GAAAAAATTG TTGTGTGGAT 119460 .......... .......... .......... .......... .......... .......... 337 TGAAACAATC TTCATATGGT ACAAATGATT TGACAAGTTT ATGTTGCGAC AAAAGGTACA 119520 ||| | || | || .......... .......... .......... .......TTT ACATTATTCT TAGAG..... 355 TAAGAAGCAA ATACGATCAT TGTCTCTATT TGCGTAAGCT TGAAGATGAT TCCTTTATAT 119580 .......... .......... .......... .......... .......... .......... 355 ATCTTCTCCT AAAAGTTGAT GATATGTTGA TAACTTCTAA AAGTCAAGAG GAAATTGAGA 119640 .......... .......... .......... .......... .......... .......... 355 AGCTAAAGAT TCAACTAAGA AAGGAGTTTG AGATTAAGGA TTTGGGTGAG GCAAAGAGTA 119700 .......... .......... .......... .......... .......... .......... 355 TTCTTGGCAT GGAGATAAAA AGAGATGGAC ATTCAAAGAA ACTCTATGTA TCTCAGAAAG 119760 .......... .......... .......... .......... .......... .......... 355 AATATTTGAA GAGAGTACTA AACTGATTCG GTATGAATGA CAAAACGAAA TCGGTTAGCA 119820 .......... .......... .......... .......... .......... .......... 355 CTCCACTTGC TCCTTATTTT AAGCTTAGTG ATGCTATGTC ACCTAAGAAT GAAGCTGAAT 119880 .......... .......... .......... .......... .......... .......... 355 GAGAATATGT CAAAAGTACC ATACATGAAT GCTATCGGTA GCTTGATGTA TGTAATGGTT 119940 .......... .......... .......... .......... .......... .......... 355 TGCACAAGGC CAGATATTTC ACACGTTGTT GACGTTGTAA GCATGTACAT GTATGATCCT 120000 .......... .......... .......... .......... .......... .......... 355 GGAAAGGATC ATTGGTAGAC TGTAAAATGG ATTCTACGGT ATATTCATAA TATTGTAGAT 120060 .......... .......... .......... .......... .......... .......... 355 GTTGGTTTGG TTTTCGAGCA GAAAGATAAT CAATATTTTT TAATTAATTT ATATTATATA 120120 .......... .......... .......... .......... .......... .......... 355 TTTATAAATT ATAATTTATA TATTATAATT TGTGTAATTG TTTTATCCTT ATTTTTATTT 120180 .......... .......... .......... .......... .......... .......... 355 AATTTTTTAA AATTACAAAT TTAAGTCATT TAAACTACAA GTAATAAATA TAAGGGAAAA 120240 .......... .......... .......... .......... .......... .......... 355 TGCAAAAGTA CCCCCTCAAC CTATGCCCGG AATCTCAGAG ACACACTTAT ACTATACTCA 120300 .......... .......... .......... .......... .......... .......... 355 GGTCCTATTA CCCCCCTGAA CTTATTCTAT AAATAATTTT CTATCCCTTT CGTCCTACGT 120360 .......... .......... .......... .......... .......... .......... 355 GACACTAGCT TGAAGAAAAA TGTCAACATA CGTTGGGCCT ACAAGATAGT GTCATGTAGG 120420 .......... .......... .......... .......... .......... .......... 355 CCGAAAAGTG GTAGAAAAAT AGTTATACAA TAAGTTTAGG GGGTAATAGG ACCTTAATAT 120480 .......... .......... .......... .......... .......... .......... 355 AATATAAGTG TGTCTTTGAG ATTTCAAACA TAGGTTGAGC AGGTACTTGT GCATTTTCCT 120540 .......... .......... .......... .......... .......... .......... 355 TAAATATAAC TTATAAATTA TAACATAATA ATAAATAATA GTAATAACTT ATAAACTTAG 120600 .......... .......... .......... .......... .......... .......... 355 AAAGATTTAA ATCTTGAAAA CTTAAATAGA CTTAATTTGC AAACTTAATA AGTAAAAAAA 120660 .......... .......... .......... .......... .......... .......... 355 TTTTAAAAAT ATATCTTTAA AATAAGCTTA AGTAAAAAAA TTACATTATA AATTTAAAAA 120720 .......... .......... .......... .......... .......... .......... 355 TAGAAAAATA AAAAAATATT CATATTTTCG TAATTCAGAA AAATCATTTT TTGAATAATT 120780 .......... .......... .......... .......... .......... .......... 355 AGATGTTGTC ATCCCGTTTA TCCCATCCCG ATCCGTTCTG GCATATAATG AACGGAACGG 120840 .......... .......... .......... .......... .......... .......... 355 AACGAAACCG AGTATCTGTC CCGGAATTTC CGGTCTGGTT CATCCCGGTA TCGGTCAATA 120900 .......... .......... .......... .......... .......... .......... 355 AACCGGTCCG ATGGTCCCGT TCTGGTCCGG TGCCAGTCTT AGGTTCTCCT ATCTATATAT 120960 .......... .......... .......... .......... .......... .......... 355 TGAAGTAGGT TCCTACACGA CCTGATGAAT TGAGTCATGA CACATGACAA GTAAAAAT 121018 || | |||||| .......... .......... .......... .......... ........AA GCAAAAAT 365 hqPGS_C01HBa0163B20.1+_SGN-U337019+ (112321 112514,116426 116465,116710 116730) ******************************************************************************** EST sequence 49 -strand 876 n (File: SGN-U337768-) 1 TTTATAATCA CCAATATCAA TTTTAGGCAT CACTTTACAG TGAATGACTT TCACTGTTCC 61 AGTGACTTAC TAACCCCTTT AATAACCAAC TTCTAGCATC GAATTCCNTC ACTTAAAGTC 121 ATTCTAAGAT TCACTTAAGT CACACAAAGA GAGACCGCCC ATATACCCTC TCTAGGTGTG 181 CCTAAACAAT CCTTATGATT ACTTATAATG AGTCACAGAC ACACTTCAAG ACATCAAATA 241 TATCAATATA TAAACCCTAT GACATTTCCT CATCAAAGGC TATAAAAAGA CTTACTTAAG 301 TAGGTCAAGA AGATAACGTC CATGATTGAC CTCTTCAAGA CTACCTAAAT AATCCTTATG 361 ACTTCCTTCG TTCGGATCAT GTCCACATAA TCAACATCTT TCCTAATTAG GGTCATTCTT 421 AAGACTCATT TAGGTAAGAT ACGAAGTGAC CATTCCTATT CCCCCTTCAC ACCTTAACTA 481 GACAACCCTT AACTACTCTA TATAGGTACT TATTCCTTTT ACATACTCCA TAACATAAGT 541 CATTAGTTCA TTAAGACTCA TACATCACAT AAAGGACATT CAAATAATTG TCTTGCACAA 601 AACCTAGGAA ATCCACATAA CACCTTCAAA GTCTATTGTG CAATGTTTAG ATAGCGTCCC 661 ATACCACCTC CTAAACTTCA TAAACTCCTC TAATTCTAAT AGGTTTTCCA TATGATGAGA 721 ATAGGCAATA ACCGACATAG ACCATGATAA CAAGACATGG AATCTGAAGT TCTATCCTAC 781 TTTGATGAGG TCGTTTAACT TGCCAATGGT AGAACTTAGA CCCTGCAGCC CGGGGGATCC 841 ACTAGTTCTA GAGCGGCCGC CACCGCGGTG AGCTCC Predicted gene structure (within gDNA segment 108774 to 118239): Exon 1 113200 113355 ( 156 n); cDNA 87 241 ( 155 n); score: 0.753 Intron 1 113356 113493 ( 138 n); Pd: 0.000 (s: 0.77), Pa: 0.000 (s: 0.72) Exon 2 113494 114032 ( 539 n); cDNA 242 761 ( 520 n); score: 0.802 Intron 2 114033 114471 ( 439 n); Pd: 0.000 (s: 0.74), Pa: 0.237 (s: 0) Exon 3 114472 114478 ( 7 n); cDNA 762 768 ( 7 n); score: 0.429 Intron 3 114479 116709 (2231 n); Pd: 0.238 (s: 0), Pa: 0.869 (s: 0) Exon 4 116710 116730 ( 21 n); cDNA 769 789 ( 21 n); score: 0.619 MATCH C01HBa0163B20.1+ SGN-U337768- 0.791 723 0.825 C PGS_C01HBa0163B20.1+_SGN-U337768- (113200 113355,113494 114032,114472 114478,116710 116730) Alignment (genomic DNA sequence = upper lines): CACCTTCTAT CATGTAATCC TCTCACTAAA AGCTATCCTA AAACTCATTT AAGTAAGACA 113259 || |||||| ||| ||| | ||||| || || || ||| | | ||| || |||| | ||| CAACTTCTAG CATCGAATTC CNTCACTTAA AGTCATTCTA AGATTCACTT AAGTCACACA 146 AAGAGAGATC GCTCATACAA CCTCTCTAGG CACACCTAAA TGATCTTTAA GACCACCTAT 113319 |||||||| | || |||| | |||||||||| |||||| ||| ||| || || ||| AAGAGAGACC GCCCATATAC CCTCTCTAGG TGTGCCTAAA CAATCCTTAT GATTACTTAT 206 AATGAGATCA -ACACACACT TACAAGACAC CAAACATATG AACATGAGAT TCTTCTACCA 113378 |||||| ||| | ||||||| | ||||||| |||| || AATGAG-TCA CAGACACACT T-CAAGACAT CAAATAT... .......... .......... 241 AAGGTGATTC AAAGTCTCAC TTGAGTGTAT TGTGAAGCGA CCGCCCATAC AATCCCTTAC 113438 .......... .......... .......... .......... .......... .......... 241 ACACACTTAA GATATCTTAT AGACTACCTA AGATAGAATC CTTCTAACTT AATACAACAA 113498 | ||| .......... .......... .......... .......... .......... .....ATCAA 246 CATATAGATG ATATGACATT CTCCT-TCCA AAGGCTATCA AAATACTTAC TTAAGTAAAT 113557 ||||| | ||||||||| |||| || |||||||| | ||| |||||| ||||||| | TATATAAACC CTATGACATT -TCCTCATCA AAGGCTATAA AAAGACTTAC TTAAGTAGGT 305 CAAGAAGATA ACGTTCAT-A TTGACCTATT CAAGATTACC AAAATAATCT TTAAGACTAC 113616 |||||||||| |||| ||| | ||||||| || ||||| |||| |||||||| ||| |||| | CAAGAAGATA ACGTCCATGA TTGACCTCTT CAAGACTACC TAAATAATCC TTATGACTTC 365 CTAAGGCTTA GATCATGTCT ACATAATCAA CCATCTTCCC TAAGTAGAGT CATTCTTAGG 113676 || | | ||||||||| |||||||||| |||||| || ||| ||| || |||||||| | CT-TCGTTCG GATCATGTCC ACATAATCAA -CATCTTTCC TAATTAGGGT CATTCTTAAG 423 ACTTATCTAG GTAAGATACG AAGTGACCAT TCTTATGCCC CCTTCACACC TTAACTAGAC 113736 ||| || ||| |||||||||| |||||||||| || ||| ||| |||||||||| |||||||||| ACTCATTTAG GTAAGATACG AAGTGACCAT TCCTATTCCC CCTTCACACC TTAACTAGAC 483 AACTATTAAC TACTATAGAT AAGTACTTAT TCATTTAACA TACTTTCTTA ACTTAATTCA 113796 ||| ||||| |||| || || | |||||||| || ||| ||| ||| | | || || ||| ||| AACCCTTAAC TACTCTATAT AGGTACTTAT TCCTTTTACA TAC-TCCATA ACATAAGTCA 542 TTACATTCAT TTAAGACTCA TTCATCACAT -AAGGACATT CAAGTAATGG TCTTGGACAA 113855 ||| |||| |||||||||| | |||||||| ||||||||| ||| |||| | ||||| |||| TTA-GTTCA- TTAAGACTCA TACATCACAT AAAGGACATT CAAATAATTG TCTTGCACAA 600 CACCTAGGGA CTCTAACTAA CATCTTCAAA ACTAACATCT TCAAAGTCTA TTGTGCAATG 113915 ||||| ||| || | | | | | ||||| || |||||||||| |||||||||| AACCTA-GGA ----AA-T-- C-----C-AC A-TAACACCT TCAAAGTCTA TTGTGCAATG 645 TCTAGATAGT ATCTCATACC ATCACCTAAA CTTCATTGAA CTTCTCTAAT GCTAGTAGGT 113975 | ||||||| || |||||| | | |||||| ||||| | || || ||||||| ||| ||||| TTTAGATAGC GTCCCATACC ACCTCCTAAA CTTCA-TAAA CTCCTCTAAT TCTAATAGGT 704 ATCCCATATG ATAAGAATAA ACAATAAACA ACATAGAAAA TGATAGATAA ATTTGGAGTT 114035 | ||||||| || |||||| |||||| | ||||||| | ||||| | | |||| TTTCCATATG ATGAGAATAG GCAATAACCG ACATAGACCA TGATAACAAG ACATGGA... 761 CTAACCTACT CCAATGAGGG TGTTCTACTT GCCAAGTGTA GAAGTAGCAC ACATCCATGT 114095 .......... .......... .......... .......... .......... .......... 761 AGGCACATAA CAATAAGGAA TATGACGGGC TTTTATGCAC TCTAGTCATT CTCAAGTAGA 114155 .......... .......... .......... .......... .......... .......... 761 GATACATTGT ACTCTAGTCT CATTTTCAAG TAGAGCTACT TCTTATAACA TACTCACTCG 114215 .......... .......... .......... .......... .......... .......... 761 GTGCTAGCGT TTGTTCTCAT AGAGTCATTT GAATTAAAGG TTCATATAAA GGAGTTCAAA 114275 .......... .......... .......... .......... .......... .......... 761 ATCTAGTTCA TAACCCAATC ACATTCACCC TACCAAAGAT GTCCTCTAGG AATACCATAG 114335 .......... .......... .......... .......... .......... .......... 761 AATTGCGACA AAGATAGATC ATTATGACTT TCCTAAGGAT GATATGATGT CGTTCAACCA 114395 .......... .......... .......... .......... .......... .......... 761 ATCAACCCTA AGTCATTCAT TACATGAAGG ATACCATTAC GATTTTTTAC TTTCACATTC 114455 .......... .......... .......... .......... .......... .......... 761 ATAACCTTAC CACTAGGTTT AAGGTTCCAC GCATATGACC TTCGTAACAT AATTCAAGGT 114515 | | | .......... ......ATCT GAA....... .......... .......... .......... 768 CTCACATATA ATTCATTCAT ACATGACAAG GGTGCACTAA GATTACCTAG TAAAGACATC 114575 .......... .......... .......... .......... .......... .......... 768 TTACATTCAC ATATCATTCA TATATCAAGT AAGGGACACA AGTCTACCAA AACTAGACAC 114635 .......... .......... .......... .......... .......... .......... 768 AATATTCTGT ACTTTATTAC ATATAGCATA TCATTCTTTG AAGCACTCAG GAATAACCCT 114695 .......... .......... .......... .......... .......... .......... 768 TATCATCTTT ATGTAATCCT ATACATTATT ATAACATCAT AATTATAACC ATCATAGACT 114755 .......... .......... .......... .......... .......... .......... 768 CATATAGTCA AGTAGGAACA ATCATGCATC AACTCTAAGA CTACACACCC AAGCACATAG 114815 .......... .......... .......... .......... .......... .......... 768 TCATAGTCTA AATGACCACC TAACATCAAT AGAAGAATAT ATACTTTCAC ATTGATCACA 114875 .......... .......... .......... .......... .......... .......... 768 TGTAGATATA TATGCTCATA CTTCACATAA ATAAACTACA CAAATCATCA TAATACTTCA 114935 .......... .......... .......... .......... .......... .......... 768 ATTAGTTTGC CGATGAGGCC ATGATCATCA TAATACATAA AGTAACACCG ACAAGGCCAT 114995 .......... .......... .......... .......... .......... .......... 768 ATCAATTGCA AGTAAACCAC ATAGCACCGA CACCATAAGC GTACAATACC AATTACAACA 115055 .......... .......... .......... .......... .......... .......... 768 TAATTGAATT ATAATTAATA TAAAATAAAG AGAATTATGG AAGCATACCA CCAATACATT 115115 .......... .......... .......... .......... .......... .......... 768 CTCCCCACTT CAATCCATAC CTAATAATCC AATTCAATAC CATAAGGCCA TTACCAATGT 115175 .......... .......... .......... .......... .......... .......... 768 CTATGAATAA TAATTCAATA CAAAACTATA ATATTCAATG AATCTAGGTC AATTCAATAT 115235 .......... .......... .......... .......... .......... .......... 768 ATGTTTAGCA ATATAAGACC AATTAGACAT CAATTAAATA CAATTATTAC ATCATTCAAT 115295 .......... .......... .......... .......... .......... .......... 768 AGCCCATAGA AAACTACACT AGAATTCATA AGCATTAAGT CAATATCACT TAACCCATAA 115355 .......... .......... .......... .......... .......... .......... 768 GTAGTCAAAA ACTAGGATTC ATCAATTACA TGGGTTCATA GGCTAATTGA GTTAGAATCA 115415 .......... .......... .......... .......... .......... .......... 768 TATAATTAAC AAATATTCAA TCAATATACA ATGATTTAAA ACCTTTAATG CAAGAACCTA 115475 .......... .......... .......... .......... .......... .......... 768 CGGATAGATA ATAAAATTAG ACAATTCATC TTTGAAAACT TTAGAAAACT CTTTGAATGT 115535 .......... .......... .......... .......... .......... .......... 768 TGGGCTCCTT AATTAATAAA GTTTCAAGGA TAACAAATCA TACCTCAATG ATGTTATTCC 115595 .......... .......... .......... .......... .......... .......... 768 ACCAATTTGA TGAATAATCA CCACTCAATT ATCCAATCCA AGCTCTTCCT TGAGTTTTGT 115655 .......... .......... .......... .......... .......... .......... 768 TCCAATAGAG TTCTAGAGAA TTTCTAAGGG AATTTGGGTT TTGATTTTGA AGAATGAATT 115715 .......... .......... .......... .......... .......... .......... 768 CTTCTGAATG TAAAAGGCTA ATAAACATGT TTAGAATACC CAAAATACCC CAACCAACAG 115775 .......... .......... .......... .......... .......... .......... 768 ACTGTTCTGT TGGTCTATTG TTTGGGATTG AGGCTGGTAC TTGGCTTGGT CATTTCCCAC 115835 .......... .......... .......... .......... .......... .......... 768 TCCTAAGTAC TGACCATGAC ACCCATCGAC GGGGCATCAA CTGTCCCACG AGCCGTCTAC 115895 .......... .......... .......... .......... .......... .......... 768 TAACTCTGTC GTTTGGGGCT GTCTTGGCTT CAAGGAAAGG GTCCTTCCTC AAGGACCCTT 115955 .......... .......... .......... .......... .......... .......... 768 GGTTGGTCCT TGGGGACTTT CACCCAGACG TTTACACTCC AAATATGTTT ATATACAAGT 116015 .......... .......... .......... .......... .......... .......... 768 TTATTACCTC TCACATGAAT TTCATAAAAA ACGAACTCGT AAAACTCAAC GAATCATTCC 116075 .......... .......... .......... .......... .......... .......... 768 AAGACACACA AGGTCGTTTC AAGGAAAACC TTTTGAATAT TATAGACGTT CTTGGACATT 116135 .......... .......... .......... .......... .......... .......... 768 TGACCTCCAA ACTTCACGAA ACTTGACGTG TTGACTATAA ACACTATATT AACTCCTAAT 116195 .......... .......... .......... .......... .......... .......... 768 AAGAACCTCA TTAATTCAGA AAACACACAT ATAGACACAT AATCACACAT GAGGCACATA 116255 .......... .......... .......... .......... .......... .......... 768 TGTGCCTTAG TTGTCCAACG TCTTAGTCAT CCCTTGATGT TTGACTTCTA ATGCACCTAA 116315 .......... .......... .......... .......... .......... .......... 768 ACTCTTAGAC ACTGCCTCAA TATCAAATTA TAAAACATTT TAGGACCTTA GACCATCGTG 116375 .......... .......... .......... .......... .......... .......... 768 AAAACCATGT TAGGATCAAG CTTCGCCTAA GTCATTTTCA AGGTATTACA ATTCCATTAC 116435 .......... .......... .......... .......... .......... .......... 768 TCTCTATATA TTCCGCTTCC GCAACAATTG GTATCAGAGC CAAGATTTAT CTGAGTATGC 116495 .......... .......... .......... .......... .......... .......... 768 TCTATGGTGC AGCATAGCCT GAACTTCCAC ATTATAAAAA GATTCACTTT GGACATTTAA 116555 .......... .......... .......... .......... .......... .......... 768 CTATTAGCTA GTAAATAGTA TTTGTAGTAA AATGATAGAC AAGAAAACGA TGAGTCCACA 116615 .......... .......... .......... .......... .......... .......... 768 TTGAGTGTCA ATAATACGTC ATCATTGGCA TCTTCGCTTA TGACGAGAAT TGTGTCAAAT 116675 .......... .......... .......... .......... .......... .......... 768 GTCAAATTTG CAGTTAAAAT TTTTGATGGA TCAGGACATT TCAGACTGTG GTGAG 116730 | | || ||| || |||| .......... .......... .......... ....GTTCTA TCCTACTTTG ATGAG 789 hqPGS_C01HBa0163B20.1+_SGN-U337768- (113200 113355,113494 114032) ******************************************************************************** EST sequence 50 +strand 911 n (File: SGN-U328267+) 1 TGAATCAACT AAAAGTGGTT ACAATGATCT TAAACGAGGT CTTAAGGTTG TATACATCAG 61 TATACGCGAT TAATCGCATG GTGAATACAG AAACAAAGTT AGGGGATTTG TGTTTACCCT 121 CTGGGGTCCA ACTCATATTG GCAACAATGT TAGTGCATCA TGATACTGAA ATATGGGGAG 181 ATGATGCAAT GGAGTTTATG CCAGAGAGAT TTAGTGAAGG AATATCAAAA GCAACAAAAG 241 GACAAGTTGT ATTTTTTCCA TTTAGTTGGG GTCCAAGAAT ATGTATTGGG CAAAATTTTG 301 CTATGTTAGA GGCAAAAATG GCAATGGTCA TGATTCTAAA ACATTATGCA TTTGAACTCT 361 CTCCATCTTA TGCTCATGCT CCTCACCCAT TGTTGCTTCA ACCTCAATAT GGTGCTCAAT 421 TGATCATGCA CAAGTTGTAG AAGTGGTTAT CACGTGTTGT CTTTTGAATC ATGTTATATC 481 CTTTATTTAT TGTTGGGATA ATGTCCAAGT ACCCCCTTAG CCTATGTCCA AAATCTCAGA 541 GATACACTTA TACCATACTA AGATCTTATT ACCCCCTGAA CTTATTTATT AATAATTTTT 601 TACCCCTTTT AGACCTACGT GGCACTATCT TGTGGGCCCA ATGGTTGTTG ACTTTTTTTT 661 TAAACTAGTG CCACGTAGGC TAAAAAGGGG TAGAAAATTA CTTATAAAAT AAGTTCAGGG 721 GGGTAATAGG ACCTTAGTAT AGTATAAGTG TGTCTCTGGA ATTTCGGGCA TAGGTTGAGG 781 GGGTACTTGT GCATTATCCC TTTATTGTTC TTTAATTATA GTTCAAGTGA AGTCATATGT 841 TGTTTTGTAT AAGACTGGAG AATTTTATAA TAATAATATT AGTGTACTTT ATGTTTATGA 901 GAAAAAAAAA A Predicted gene structure (within gDNA segment 127996 to 118406): Exon 1 126426 126382 ( 45 n); cDNA 412 456 ( 45 n); score: 0.600 Intron 1 126381 120581 (5801 n); Pd: 0.000 (s: 0.60), Pa: 0.000 (s: 0.62) Exon 2 120580 120206 ( 375 n); cDNA 457 830 ( 374 n); score: 0.785 PPA cDNA 900 911 MATCH C01HBa0163B20.1- SGN-U328267+ 0.785 420 0.461 C PGS_C01HBa0163B20.1-_SGN-U328267+ (126426 126382,120580 120206) Alignment (genomic DNA sequence = upper lines): GTGAACAAAT AAGCGTGGAA AAGTGTTAGA GAAGACTAGT ACGGGCCCTC TAACATTATT 126367 ||| ||| | | | || | |||| |||| | || ||| | GTGCTCAATT GATCATGCAC AAGTTGTAGA AGTGGTTATC ACGTG..... .......... 456 GTTCCCGGAC CATCCACCTT TTCCTTCCCC TTTGAGTGGC TCGGTGAGAT TAGATTTCTA 126307 .......... .......... .......... .......... .......... .......... 456 GAATGAAATG AGGTGATAAA AAGAAACGAT TGCTCACAGG AGATCCCTAT TCATGGAAGC 126247 .......... .......... .......... .......... .......... .......... 456 ACCGTGTAAT TAAGGTTAAG GGGAAAATCA AAGTGGGTTC CTAAACACAA ACTAAAGCTA 126187 .......... .......... .......... .......... .......... .......... 456 AGAGCTTCAG AAGCTTACCT TATTAGCATA TATCATATCA TATCAAATCA TAAAATATTA 126127 .......... .......... .......... .......... .......... .......... 456 TTATAAGTGG GAAGCTCCTA ACTTAAAAAT TGAATTACCA TTCTGCCCTT ATTTTATTTC 126067 .......... .......... .......... .......... .......... .......... 456 TAAACTAATA TAAATATTAA TATAAAATTA ATTTAATATT AAAGAATAAT TTTATTTAAA 126007 .......... .......... .......... .......... .......... .......... 456 TTCATGCATC TAGACACAAT GGTTCACATT CTTTGGTACA GTAAATTTTC TATCCCATCG 125947 .......... .......... .......... .......... .......... .......... 456 TTTCTCTCTC TCTCTCTCTC TCTCTCTATA TATATATATA TATATATTAC TGTATAACCT 125887 .......... .......... .......... .......... .......... .......... 456 TCACATTAAA TTAAAATATG ATTAAATATC TAATCATTTA AATGCTAAGT AATAGTTATA 125827 .......... .......... .......... .......... .......... .......... 456 ATATATTATA CTAAATAAAA AAAATAAGAA GTTATAAAGT CAAACATTGA AAGGTAGAAA 125767 .......... .......... .......... .......... .......... .......... 456 TATTTTTTAG AAAAGTGTTA GAAATCATTT CATAAAAGTT GTTAGGAATT ACTCTTTTTT 125707 .......... .......... .......... .......... .......... .......... 456 TAAATAAAAA CTTTTTATCT AATTCTTTTA TGAACGGTTA CGTTTAAATG GAAATTTGTT 125647 .......... .......... .......... .......... .......... .......... 456 AATTAGATAA AACATTTTTT TATATATAAA TATTTGATAA TTAAAGCATT TATCCTTTAT 125587 .......... .......... .......... .......... .......... .......... 456 TCTTTTTTCA TAATTGGTGT GGTTAAATGG ATTAAATTTG TTATCCTTTC TCTGTAATTA 125527 .......... .......... .......... .......... .......... .......... 456 GTATAATTAA ATGTATTGAA TTACTCCCCG TTCGGTATTG TTTGTCATGA TTTCTATTTT 125467 .......... .......... .......... .......... .......... .......... 456 TAGAGTCAAA CTATAAAAAC TTTTACTAAC ATTTTAAGAT GTATTTTTTC ATCATATTAA 125407 .......... .......... .......... .......... .......... .......... 456 TATGCAAAAA ATTGTAATTT ATAGTAATTT TCATATAGTT TTAGAGTATC TAAGTTTTTT 125347 .......... .......... .......... .......... .......... .......... 456 GTCAAATATC GAATTAATAT GATCTAATTT AACATTGAAA ATTAAGCAAA TTGGCTTTCG 125287 .......... .......... .......... .......... .......... .......... 456 AAAAGCGCAA CATGACGAAC AATTTCGGAC GGAGGAAGTA TTAGTAAAAA CAATCAACTT 125227 .......... .......... .......... .......... .......... .......... 456 TTCTCTCCCC GTGTCTAGGA TCATTAACTT CTGAAAATTA ACTTAAATAT CTCTTCACAT 125167 .......... .......... .......... .......... .......... .......... 456 TTTCATCTTA TCCTATAAAT CTTTAGCTAT ATATATGTAT CATGAAAAAT TAATTTTCCT 125107 .......... .......... .......... .......... .......... .......... 456 TTACTAATTG TCTTTTTTTT TATGTGAATC ACTAGGCAAT TTTCAGAAAC TTATTTTGTT 125047 .......... .......... .......... .......... .......... .......... 456 TTGAAATATT AATATTTGTT TGATCCTAGT TAGAATAATA TTTTGTATCA TAGTTTTATC 124987 .......... .......... .......... .......... .......... .......... 456 TTTAAAGTTT TAGATGGGGT TTTTTTCAAT TGTTTATAAA TATTTGAGTT TTTGTGGAAC 124927 .......... .......... .......... .......... .......... .......... 456 AATTATTATA CTCTTATTTT GTCATATATT TCCTGATTTG TGTGTTTACT TCTCTTTTTT 124867 .......... .......... .......... .......... .......... .......... 456 CTATGTATTT TTAATTTTTA ATTGATATGC TAAATTTCTT TTCAGGTCAT TGTCACATTA 124807 .......... .......... .......... .......... .......... .......... 456 ACCGTTTGGA TATATATATA TATATATAGA CACATACACA TGCACACTAA AATTGAGACA 124747 .......... .......... .......... .......... .......... .......... 456 GAAAAAGTTG AAAGTTGAAA GTATCAAATT ATCCTTTACG GGTTGAAAAG TCATTTAAGT 124687 .......... .......... .......... .......... .......... .......... 456 ATTTAATCCA AATATTTAAT AATTGGTATT TAAAAGTAAA TTTACCTATC TTTTAATAAT 124627 .......... .......... .......... .......... .......... .......... 456 ATTTCATTAA AACGAAACAA TAGAAAACAA ATACATTGTC ACTCATTAGT TCATTCAATT 124567 .......... .......... .......... .......... .......... .......... 456 CAATATGGTG GAATTGCTTT CATATTCCAC AATTATTCAA CCTTTAGAAT TACTTTTTTA 124507 .......... .......... .......... .......... .......... .......... 456 ATATTTTAGA TATGTATAAT TTTCGATGAT AAATATAAAC TTTAAACTAA CAGTATTTAG 124447 .......... .......... .......... .......... .......... .......... 456 GAAGTCCAAG TAACGGGCAT ATCTATGTGG TCAAGAAAAT CATTTAACTT TTTCTTGCTC 124387 .......... .......... .......... .......... .......... .......... 456 TTTATGAATT TTCAATTATT TTTAAATTTA TATGCTATTT ATCATTCATA AGTAGTGAAA 124327 .......... .......... .......... .......... .......... .......... 456 CACTTGAATC ATTATTAAGG CTTTTGAATT TTGATTGGTT AGGAGATAAG GTATCATCAA 124267 .......... .......... .......... .......... .......... .......... 456 GAACTCTACT CATGTATTTT TTATTATTAT ATATATTGTT ATAATTAAAA TCTTAAGAAG 124207 .......... .......... .......... .......... .......... .......... 456 GATATGAATG TTATATTTGT TCTTATCTGT TAACATTTTT TGTATTCTTT ATCGATTTAT 124147 .......... .......... .......... .......... .......... .......... 456 ACTTCTTTAA TTTAATCTTC TATGAAATTA TGAATGTTAT AAATCTATTT TTATTAGTGC 124087 .......... .......... .......... .......... .......... .......... 456 TGAAATTACT AATTTATGGC TTTTATATTC GTTTTTAAAT ATACTTTTAT ATTTTCTTTC 124027 .......... .......... .......... .......... .......... .......... 456 TTTTATCATT TTGTTACTTG TATGGTTTCT TAAGTAACTA CATATTTGTG TGCTTACTAA 123967 .......... .......... .......... .......... .......... .......... 456 ATGGAAGCGT AATGAGAGAT TATTAAGGAT AAGCCATATA GATATATTCA TATAATTAAA 123907 .......... .......... .......... .......... .......... .......... 456 AGCTAATAGT ATCTTAATTA GTTTTTCAAA TTTCTTGCTT GATGTTCAAT GCATTATTCG 123847 .......... .......... .......... .......... .......... .......... 456 ATTATTATGA ATTTTATATA ATGAATAAAA TATAAATAGA TAAAACTAAT ATTTTTAATT 123787 .......... .......... .......... .......... .......... .......... 456 TCAACATTTT CTATATAATA ATTGTATGGA ACAAACATGC AACGAACGTT TGCAAAAATT 123727 .......... .......... .......... .......... .......... .......... 456 AGTATATCAA AAAAGTAGAG TCTTTAATTC GAACCTAAAT AATAAGAAAA ACGAAACATA 123667 .......... .......... .......... .......... .......... .......... 456 GAACCGGGTA AGGAGAGGGA AAGCCAAAAC TTACTTCTTT TAGGGGGTTA ATTCCCTTTA 123607 .......... .......... .......... .......... .......... .......... 456 CACGTTAATT TAAAAAGATA ATTTAGATAT GTTTTATCTG GATTAAGATC AAAAACTTGT 123547 .......... .......... .......... .......... .......... .......... 456 CGTCATACTT ATGTTAGTTA TTATTGTTCA TTGAGTTAAA AAGATATGCC CACCTATTTT 123487 .......... .......... .......... .......... .......... .......... 456 GTATCCAATA CTTATTTTTT AAATTAGAGT AATTATAAAA AAAATTGTTA TATTATAAGG 123427 .......... .......... .......... .......... .......... .......... 456 ATAAATCAGT CCATATTGTT CCCTAGTTTG AAACAGACAG GAATTGAAAT GAACATTAAA 123367 .......... .......... .......... .......... .......... .......... 456 ATTATATTAA GCAAACCTTA AATGTAGGAC AAAACAAAAC AAAGTTAAAA AAATGGAAAC 123307 .......... .......... .......... .......... .......... .......... 456 ACTAACAACC TCCTCTTTTT CTTAGACCAT TTCATATCCT CACATATTTA ACAGAAACCA 123247 .......... .......... .......... .......... .......... .......... 456 ACACTATAAA TAGTTTCTCC ATTTTTTAGG AAATACATCT TTCAGAGCCA AGGGGCATGT 123187 .......... .......... .......... .......... .......... .......... 456 ACGGTCTCTA ATAAAAAATC CCCAAAAGCT CTCTATCGAT TTAACTATAC AAAAACATTT 123127 .......... .......... .......... .......... .......... .......... 456 TTTTTTTTAC TTTGGGAAAA ATACATAAAA GCATCAAAAT ATTATGGCTA AAAAATTAGT 123067 .......... .......... .......... .......... .......... .......... 456 CATTGGTGGC ATAGCCTCAA TTCTTGTGGT GGCTTGTGTT GTTGCAGCAT GTGTCACCAT 123007 .......... .......... .......... .......... .......... .......... 456 TACCAAAAAG AATGCGAGCG ATGGTGGTGA TGGAGCTAGC AATGGTGGCA TTTCAACCTC 122947 .......... .......... .......... .......... .......... .......... 456 TACAAAATCT GTTCAAGCAA TGTGTCAACC TACTGACTAC AAAGAAGCTT GTGAGAAGAG 122887 .......... .......... .......... .......... .......... .......... 456 TCTTGCATCA GCCAAGAACA CTAGTGACCC AAAGGAACTT ATAAAAGTTG CATTTGAATC 122827 .......... .......... .......... .......... .......... .......... 456 AACCATAACT GACATAAAAA ATGCCATAAA AAATACTGAC TTGATCAAGG ATGCAGCCAA 122767 .......... .......... .......... .......... .......... .......... 456 TGATCCTAGA ACAAAAGAGG CTCTAAATAC TTGTGACGGT CTTCTTGATG TGTCTATTGA 122707 .......... .......... .......... .......... .......... .......... 456 TGATCTCAGA AGATCGTTCG ATAAAGTTGG CACCTTTGAT ATTAACAAGA TCAAGGATTA 122647 .......... .......... .......... .......... .......... .......... 456 TACCGATGAT CTAAAAACAT GGATCAGTGC TTCGATTACT TATCAAGAAA CTTGCTTAGA 122587 .......... .......... .......... .......... .......... .......... 456 TGCTTTTCAA AACACAAGTG GTGACACTGG TGAAAAAATG AAGAAATTGT TAAAGACTGC 122527 .......... .......... .......... .......... .......... .......... 456 AGGGGAGCTT ACTAGCAATG GCCTTGCTAT GATTACTAGC TTTGGTGACA TGCTTACTAA 122467 .......... .......... .......... .......... .......... .......... 456 CATGAACATT CCTGGTATTA GCCGCCGATT ATTGGCAGAT GACTACACAT CATTCGTTGA 122407 .......... .......... .......... .......... .......... .......... 456 AGACGGTTCT CGTAGGCTTC TTCAAGTTTC AAATACCAAG CCTAATGCTG TGGTTGCTCT 122347 .......... .......... .......... .......... .......... .......... 456 AGATGGCAGC GGACAATTCA AGACCATCAA AGAAGCCCTC AAAGGTGTGC CCCCAAAGAA 122287 .......... .......... .......... .......... .......... .......... 456 CATTCAACCC TATGTCATCT TAATCAAGGC AGGTGAATAT AAGGAGATGG TCGATATCCC 122227 .......... .......... .......... .......... .......... .......... 456 AAGAGGGGTG ACAAACGTTG TGTTTATTGG CGAAGGCCCA ACCAAGACAA AGATTACTGG 122167 .......... .......... .......... .......... .......... .......... 456 CAACAAGAAC TATGCTGATG GCACTGCCAC TTTCCATACC TCCACCGTTG GTAAGTCAGA 122107 .......... .......... .......... .......... .......... .......... 456 TCATTCAATT AATGAGTTTA TGTGACGTCT AGCGCACACA AAAGTTAAAA TCTTTCTCTT 122047 .......... .......... .......... .......... .......... .......... 456 AAAATAATGT TAATGCAGCC GTGAATGGAG ATGGTTTCGT AGCAAAGGAT ATCGGGTTTG 121987 .......... .......... .......... .......... .......... .......... 456 AAAACACAGC TGGAGCAATG AAGCACCAAG CCGTTGCACT CCGTGTATCA GCAGACAAGA 121927 .......... .......... .......... .......... .......... .......... 456 CAGTTTTCTA CAACTGCAAC ATTGATGGAT ACCAAGACAC GCTATACACA CATTCCTACA 121867 .......... .......... .......... .......... .......... .......... 456 GACAATTCTA CAAAGATTGT TCCATCTCAG GAACCATTGA CTTCATCTTT GGCGATGCAT 121807 .......... .......... .......... .......... .......... .......... 456 CTGCCGTGTT CCAAAACTGT AAGATGATTG TAAGGAAACC AGGTGCAAAC CAAGCTTGTA 121747 .......... .......... .......... .......... .......... .......... 456 TGGTCACTGC CCAAGGAAGA AAAGACCATC GTGGGGTCGG TGCAATCATT TTGAGGAACT 121687 .......... .......... .......... .......... .......... .......... 456 GTGAAATCAG CGCTGAGCCA GCATTCATTA ACACCCAGCC ACCAATCAAA GCCTATCTTG 121627 .......... .......... .......... .......... .......... .......... 456 GACGACCATG GAAGGAGTAT TCCAGGACAA TTATAATGCA AAGTCAGATA GACGCGTTCA 121567 .......... .......... .......... .......... .......... .......... 456 TTGATCCTGA AGGATGGGCT CCATGGAATG GTAACTTTGC TCTAAACACT CTGTATTATG 121507 .......... .......... .......... .......... .......... .......... 456 CAGAGTATCA GAACAGGGGA CCAGGAGCAA ATACTGACAG AAGGGTTAAA TGGGCTGGTT 121447 .......... .......... .......... .......... .......... .......... 456 ATAAGAAAAG CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC TTCATTGATC 121387 .......... .......... .......... .......... .......... .......... 456 AAGATAGCTG GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAAC AACTTTAATT 121327 .......... .......... .......... .......... .......... .......... 456 ATAAATCTTA TCTTCTACTG ATTAAAAAAT AAAAATAACT ATCCAACTTA TGTTTATTTA 121267 .......... .......... .......... .......... .......... .......... 456 GTTGCTTTTC TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTTATTC ATATTTTATG 121207 .......... .......... .......... .......... .......... .......... 456 TCTTAGCTTA TGCAAATTTC GACTTGGCTT TCAGCTTGTT TTATTCTTGT TTTCCCCTCT 121147 .......... .......... .......... .......... .......... .......... 456 AATTTGCATG ATATCAACCT AAATTCTACG TCATATAGAA TTACATTGTT AGCAAGTTCT 121087 .......... .......... .......... .......... .......... .......... 456 AGCACCACTG AATAAGTAAT TATAGAAGTT AGCATGACAA TTAGAGTAGC AAAAGTTGAG 121027 .......... .......... .......... .......... .......... .......... 456 TACTACACAT TTTTACTTGT CATGTGTCAT GACTCAATTC ATCAGGTCGT GTAGGAACCT 120967 .......... .......... .......... .......... .......... .......... 456 ACTTCAATAT ATAGATAGGA GAACCTAAGA CTGGCACCGG ACCAGAACGG GACCATCGGA 120907 .......... .......... .......... .......... .......... .......... 456 CCGGTTTATT GACCGATACC GGGATGAACC AGACCGGAAA TTCCGGGACA GATACTCGGT 120847 .......... .......... .......... .......... .......... .......... 456 TTCGTTCCGT TCCGTTCATT ATATGCCAGA ACGGATCGGG ATGGGATAAA CGGGATGACA 120787 .......... .......... .......... .......... .......... .......... 456 ACATCTAATT ATTCAAAAAA TGATTTTTCT GAATTACGAA AATATGAATA TTTTTTTATT 120727 .......... .......... .......... .......... .......... .......... 456 TTTCTATTTT TAAATTTATA ATGTAATTTT TTTACTTAAG CTTATTTTAA AGATATATTT 120667 .......... .......... .......... .......... .......... .......... 456 TTAAAATTTT TTTACTTATT AAGTTTGCAA ATTAAGTCTA TTTAAGTTTT CAAGATTTAA 120607 .......... .......... .......... .......... .......... .......... 456 ATCTTTCTAA GTTTATAAGT TATTACTATT ATTTATTATT ATGTTATAAT TTATAAGTTA 120547 | | ||| || ||||||| || | | ||| .......... .......... ......TTGT CTTTTGAATC ATGTTAT-AT CCTTTATTTA 489 TATTTAAGGA AAATGCACAA GTACCTGCTC AACCTATGTT TGAAATCTCA AAGACACACT 120487 | | | ||| |||| ||| ||||| || | ||||||| |||||||| ||| ||||| T-TGTTGGGA TAATGTCCAA GTACCCCCTT AGCCTATGTC CAAAATCTCA GAGATACACT 548 TATATTATAT TAAGGTCCTA TTACCCCCTA AACTTATTGT ATAACTATTT TTCTACCACT 120427 |||| ||| |||| || || ||||||||| |||||||| | || | || || || |||| || TATACCATAC TAAGATCTTA TTACCCCCTG AACTTATT-T ATTAATAATT TTTTACCCCT 607 TTTCGGCCTA CATGACACTA TCTTGTAGGC CCAACGTATG TTGACATTTT TCTTCAAGCT 120367 ||| | |||| | || ||||| |||||| ||| |||| | || ||||| |||| | || || || TTTAGACCTA CGTGGCACTA TCTTGTGGGC CCAATGGTTG TTGACTTTTT T-TTTAAACT 666 AGTGTCACGT AGG-ACGAAA GGGATAGAAA ATTATTTATA GAATAAGTTC AGGGGGGTAA 120308 |||| ||||| ||| ||| ||| |||||| |||| ||||| ||||||||| |||||||||| AGTGCCACGT AGGCTAAAAA GGGGTAGAAA ATTACTTATA AAATAAGTTC AGGGGGGTAA 726 TAGGACCTGA GTATAGTATA AGTGTGTCTC TGAGATTCCG GGCATAGGTT GAGGGGGTAC 120248 |||||||| | |||||||||| |||||||||| || ||| || |||||||||| |||||||||| TAGGACCTTA GTATAGTATA AGTGTGTCTC TGGAATTTCG GGCATAGGTT GAGGGGGTAC 786 TTTTGCATTT TCCC-TTA-T ATTTATTACT TGTAGTTTAA ATGA 120206 || |||||| |||| ||| | || ||| | | ||||| || ||| TTGTGCATTA TCCCTTTATT GTTCTTTAAT TATAGTTCAA GTGA 830 hqPGS_C01HBa0163B20.1-_SGN-U328267+ (120580 120206) ******************************************************************************** EST sequence 40 +strand 2080 n (File: SGN-U314049+) 1 GAGGACAAAA CAAAACCCAG TTAAAAAAAT GGAAACACTA ACAACCTCCT CTTTTTCTTA 61 GACCATTTCA TATCCTCACA TATTTAACAG AAACCAACAC TATAAATAGT TTCTCCATTT 121 TTTAGGAAAT ACATCTTTCA GAGCCAAGGG GCATGTACCC TCTCTAATAA AAAATCCCCA 181 AAAGCTCTCT ATCAATTTAA CTATACAAAA ACATTTTTTT TTTTTTACTT TGGGAAAAAT 241 ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT AGCCTCAATT 301 CTTGTGGTGG CTTGTGTTGT TGCAGCATGT GTCACCATTA CCAAAAAGAA CGCGAGCGAT 361 GGTGGTGATG GAGCTAGCAA TGGTGGTATT TCAACCTCTA CAAAATCTGT TCAAGCAATA 421 TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC CAAGAACACT 481 AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA CATAAAAAAT 541 GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC AAAAGAGGCT 601 CTAAATACTT GTGAAGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG ATCGTTCGAT 661 AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT AAAAACATGG 721 ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA CACAAGTGGT 781 GACACTGGTG AAAAAATGAA GAAATTGTTA AAGACTGCAG GGGAGCTTAC TAGCAATGGC 841 CTTGCTATGA TTACTAGCTT TGGTGACATG CTTACTAACA TGAACATTCC TGGTATTAGC 901 CGCCGATTAT TGGCAGATGA CTACACATCA TTCGTTGAAG ACGGTTCTCG TAGGCTTCTT 961 CAAGTTTCAA ATACCAAGCC TAATGCTGTG GTTGCTCTAG ATGGCAGCGG ACAATTCAAG 1021 ACCATCAAAG AAGCCCTCAA AGGTGTGCCC CCAAAGAACA TTCAACCCTA TGTCATCTTA 1081 ATCAAGGCAG GTGAATATAA GGAGATGGTC GATATCCCAA GAGGGGTGAC AAACGTTGTG 1141 TTTATTGGCG AAGGCCCAAC CAAGACAAAG ATTACTGGCA ACAAGAACTA TGCTGATGGC 1201 ACTGCCACTT TCCATACCTC CACCGTTGCC GTGAATGGAG ATGGTTTCGT AGCAAAGGAT 1261 ATCGGGTTTG AAAACACAGC TGGAGCAATG AAGCACCAAG CCGTTGCACT CCGTGTATCA 1321 GCAGACAAGA CAGTTTTCTA CAACTGCAAC ATTGATGGAT ACCAAGACAC GCTATACACA 1381 CATTCCTACA GACAATTCTA CAAAGATTGT TCCATCTCAG GAACCATTGA CTTCATCTTT 1441 GGCGATGCAT CTGCCGTGTT CCAAAACTGT AAGATGATTG TAAGGAAACC AGGTGCAAAC 1501 CAAGCTTGTA TGGTCACTGC CCAAGGAAGA AAAGACCATC GTGGGGTCGG TGCAATCATT 1561 TTGAGGAACT GTGAAATCAG CGCTGAGCCA GCATTCATTA GCACCCAGCC ACCAATCAAA 1621 GCCTATCTTG GACGACCATG GAAGGAGTAT TCCAGGACAA TTATAATGCA AAGTCAGATA 1681 GACGCGTTCA TTGATCCTGA AGGATGGGCT CCATGGAATG GTAACTTTGC TCTAAACACT 1741 CTGTATTATG CAGAGTATCA GAACAGGGGA CCAGGAGCAA ATACTGACAG AAGGGTTAAA 1801 TGGGCTGGTT ATAAGAAAAG CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC 1861 TTCATTGATC AAGATAGCTG GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAAC 1921 AACTTTAATT ATAAATCTTA TCTTCTACTG ATTAAAAAAA AAAAATAACT ATCCAACTTA 1981 TGTTTATTTA GTTGCTTTTC TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTTATTC 2041 ATATTTTATG TCTTAGCTTA TGCAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 124104 to 120441): Exon 1 123341 122117 (1225 n); cDNA 2 1228 (1227 n); score: 0.989 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 1.00), Pa: 0.981 (s: 1.00) Exon 2 122028 121192 ( 837 n); cDNA 1229 2065 ( 837 n); score: 0.998 PPA cDNA 2066 2080 MATCH C01HBa0163B20.1- SGN-U314049+ 0.992 2062 0.991 C PGS_C01HBa0163B20.1-_SGN-U314049+ (123341 122117,122028 121192) Alignment (genomic DNA sequence = upper lines): AGGACAAAAC AAAACAAAGT TAAAAAAATG GAAACACTAA CAACCTCCTC TTTTTCTTAG 123282 |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACAAAAC AAAACCCAGT TAAAAAAATG GAAACACTAA CAACCTCCTC TTTTTCTTAG 61 ACCATTTCAT ATCCTCACAT ATTTAACAGA AACCAACACT ATAAATAGTT TCTCCATTTT 123222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATTTCAT ATCCTCACAT ATTTAACAGA AACCAACACT ATAAATAGTT TCTCCATTTT 121 TTAGGAAATA CATCTTTCAG AGCCAAGGGG CATGTACGGT CTCTAATAAA AAATCCCCAA 123162 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| TTAGGAAATA CATCTTTCAG AGCCAAGGGG CATGTACCCT CTCTAATAAA AAATCCCCAA 181 AAGCTCTCTA TCGATTTAAC TATACAAAAA CA--TTTTTT TTTTTACTTT GGGAAAAATA 123104 |||||||||| || ||||||| |||||||||| || |||||| |||||||||| |||||||||| AAGCTCTCTA TCAATTTAAC TATACAAAAA CATTTTTTTT TTTTTACTTT GGGAAAAATA 241 CATAAAAGCA TCAAAATATT ATGGCTAAAA AATTAGTCAT TGGTGGCATA GCCTCAATTC 123044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAAAAGCA TCAAAATATT ATGGCTAAAA AATTAGTCAT TGGTGGCATA GCCTCAATTC 301 TTGTGGTGGC TTGTGTTGTT GCAGCATGTG TCACCATTAC CAAAAAGAAT GCGAGCGATG 122984 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TTGTGGTGGC TTGTGTTGTT GCAGCATGTG TCACCATTAC CAAAAAGAAC GCGAGCGATG 361 GTGGTGATGG AGCTAGCAAT GGTGGCATTT CAACCTCTAC AAAATCTGTT CAAGCAATGT 122924 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||| | GTGGTGATGG AGCTAGCAAT GGTGGTATTT CAACCTCTAC AAAATCTGTT CAAGCAATAT 421 GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAGCC AAGAACACTA 122864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAGCC AAGAACACTA 481 GTGACCCAAA GGAACTTATA AAAGTTGCAT TTGAATCAAC CATAACTGAC ATAAAAAATG 122804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACCCAAA GGAACTTATA AAAGTTGCAT TTGAATCAAC CATAACTGAC ATAAAAAATG 541 CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCAATGA TCCTAGAACA AAAGAGGCTC 122744 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCAATGA TCCTAGAACA AAAGAGGCTC 601 TAAATACTTG TGACGGTCTT CTTGATGTGT CTATTGATGA TCTCAGAAGA TCGTTCGATA 122684 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATACTTG TGAAGGTCTT CTTGATGTGT CTATTGATGA TCTCAGAAGA TCGTTCGATA 661 AAGTTGGCAC CTTTGATATT AACAAGATCA AGGATTATAC CGATGATCTA AAAACATGGA 122624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTGGCAC CTTTGATATT AACAAGATCA AGGATTATAC CGATGATCTA AAAACATGGA 721 TCAGTGCTTC GATTACTTAT CAAGAAACTT GCTTAGATGC TTTTCAAAAC ACAAGTGGTG 122564 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTGCTTC GATTACTTAT CAAGAAACTT GCTTAGATGC TTTTCAAAAC ACAAGTGGTG 781 ACACTGGTGA AAAAATGAAG AAATTGTTAA AGACTGCAGG GGAGCTTACT AGCAATGGCC 122504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACTGGTGA AAAAATGAAG AAATTGTTAA AGACTGCAGG GGAGCTTACT AGCAATGGCC 841 TTGCTATGAT TACTAGCTTT GGTGACATGC TTACTAACAT GAACATTCCT GGTATTAGCC 122444 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTATGAT TACTAGCTTT GGTGACATGC TTACTAACAT GAACATTCCT GGTATTAGCC 901 GCCGATTATT GGCAGATGAC TACACATCAT TCGTTGAAGA CGGTTCTCGT AGGCTTCTTC 122384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGATTATT GGCAGATGAC TACACATCAT TCGTTGAAGA CGGTTCTCGT AGGCTTCTTC 961 AAGTTTCAAA TACCAAGCCT AATGCTGTGG TTGCTCTAGA TGGCAGCGGA CAATTCAAGA 122324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTCAAA TACCAAGCCT AATGCTGTGG TTGCTCTAGA TGGCAGCGGA CAATTCAAGA 1021 CCATCAAAGA AGCCCTCAAA GGTGTGCCCC CAAAGAACAT TCAACCCTAT GTCATCTTAA 122264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCAAAGA AGCCCTCAAA GGTGTGCCCC CAAAGAACAT TCAACCCTAT GTCATCTTAA 1081 TCAAGGCAGG TGAATATAAG GAGATGGTCG ATATCCCAAG AGGGGTGACA AACGTTGTGT 122204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGCAGG TGAATATAAG GAGATGGTCG ATATCCCAAG AGGGGTGACA AACGTTGTGT 1141 TTATTGGCGA AGGCCCAACC AAGACAAAGA TTACTGGCAA CAAGAACTAT GCTGATGGCA 122144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTGGCGA AGGCCCAACC AAGACAAAGA TTACTGGCAA CAAGAACTAT GCTGATGGCA 1201 CTGCCACTTT CCATACCTCC ACCGTTGGTA AGTCAGATCA TTCAATTAAT GAGTTTATGT 122084 |||||||||| |||||||||| ||||||| CTGCCACTTT CCATACCTCC ACCGTTG... .......... .......... .......... 1228 GACGTCTAGC GCACACAAAA GTTAAAATCT TTCTCTTAAA ATAATGTTAA TGCAGCCGTG 122024 ||||| .......... .......... .......... .......... .......... .....CCGTG 1233 AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG AGCAATGAAG 121964 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG AGCAATGAAG 1293 CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA CTGCAACATT 121904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA CTGCAACATT 1353 GATGGATACC AAGACACGCT ATACACACAT TCCTACAGAC AATTCTACAA AGATTGTTCC 121844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGGATACC AAGACACGCT ATACACACAT TCCTACAGAC AATTCTACAA AGATTGTTCC 1413 ATCTCAGGAA CCATTGACTT CATCTTTGGC GATGCATCTG CCGTGTTCCA AAACTGTAAG 121784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTCAGGAA CCATTGACTT CATCTTTGGC GATGCATCTG CCGTGTTCCA AAACTGTAAG 1473 ATGATTGTAA GGAAACCAGG TGCAAACCAA GCTTGTATGG TCACTGCCCA AGGAAGAAAA 121724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGATTGTAA GGAAACCAGG TGCAAACCAA GCTTGTATGG TCACTGCCCA AGGAAGAAAA 1533 GACCATCGTG GGGTCGGTGC AATCATTTTG AGGAACTGTG AAATCAGCGC TGAGCCAGCA 121664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCATCGTG GGGTCGGTGC AATCATTTTG AGGAACTGTG AAATCAGCGC TGAGCCAGCA 1593 TTCATTAACA CCCAGCCACC AATCAAAGCC TATCTTGGAC GACCATGGAA GGAGTATTCC 121604 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATTAGCA CCCAGCCACC AATCAAAGCC TATCTTGGAC GACCATGGAA GGAGTATTCC 1653 AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 121544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 1713 TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 121484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 1773 GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 121424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 1833 GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 121364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 1893 GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 121304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 1953 AAAAAATAAA AATAACTATC CAACTTATGT TTATTTAGTT GCTTTTCTAG CTATGTCATG 121244 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAAAAA AATAACTATC CAACTTATGT TTATTTAGTT GCTTTTCTAG CTATGTCATG 2013 TAATACTTAA TTAGTTTTAG TTTATTCATA TTTTATGTCT TAGCTTATGC AA 121192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || TAATACTTAA TTAGTTTTAG TTTATTCATA TTTTATGTCT TAGCTTATGC AA 2065 hqPGS_C01HBa0163B20.1-_SGN-U314049+ (123341 122117,122028 121192) ******************************************************************************** EST sequence 42 +strand 895 n (File: SGN-U334754+) 1 AAGCTGGAGC TCCCCGCGGT GGCGGCCGCT CTAGAACTAG TGGATCCCCC GGGCTGCAGG 61 AATTCTGATG GAAGTGTCAC GTTCAATTCC TCCACAGGTT TTCCTTTTGT CCATGTGTTC 121 GAAACGAAAG ATGTCAAGAT TGTCTTCTTT GTCTGGACAA TGAAGCACCA AGCCGGTGCA 181 CTCCTGTGTG TCAACAAACA AGACTTCTTT CTACTCCTGC ATCCTTTTTG GATACCTAAA 241 CACACTATAC ACACATTCCT ACAGACAATT CTACAAAGAT TGTTCCATCT CAGGAACCAT 301 TGACTTCATC TTTGGCGATG CATCTGCCGT GTTCCAAAAC TGTAAGATGA TTGTAAGGAA 361 ACCAGGTGCA AACCAAGCTT GTATGGTCAC TGCCCAAGGA AGAAAAGACC ATCGTGGGGT 421 CGGTGCAATC ATTTTGAGGA ACTGTGAAAT CAGCGCTGAG CCAGCATTCA TTAGCACCCA 481 GCCACCAATC AAAGCCTATC TTGGACGACC ATGGAAGGAG TATTCCAGGA CAATTATAAT 541 GCAAAGTCAG ATAGACGCGT TCATTGATCC TGAAGGATGG GCTCCATGGA ATGGTAACTT 601 TGCTCTAAAC ACTCTGTATT ATGCAGAGTA TCAGAACAGG GGACCAGGAG CAAATACTGA 661 CAGAAGGGTT AATGGGCTGG TTATAAGAAA AGCATTTCAC CACANGAAGC TGAAAATATG 721 CTCCTAATAT CTTCATTGAT CAAGATAGCT GGATTAAGAA GACTGGCATT TCCTATTGAT 781 GAAATCTGTA ACACTTTTAA TAATAATCTT ATCTTCTACT GATTAAAAAA AAAAAAAAAA 841 ACTCAAGGGG GGCCCGGTAC CCAATTCCCC TATAGGGAGT CTATACAATT CCCGG Predicted gene structure (within gDNA segment 124925 to 119615): Exon 1 122155 122117 ( 39 n); cDNA 62 101 ( 40 n); score: 0.705 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 0.71), Pa: 0.981 (s: 0.50) Exon 2 122028 121293 ( 736 n); cDNA 102 835 ( 734 n); score: 0.921 MATCH C01HBa0163B20.1- SGN-U334754+ 0.921 775 0.866 C PGS_C01HBa0163B20.1-_SGN-U334754+ (122155 122117,122028 121293) Alignment (genomic DNA sequence = upper lines): ATGCTGATGG CACTGCCACT TTCCATACCT CCAC-CGTTG GTAAGTCAGA TCATTCAATT 122097 || ||||||| | || ||| ||| || ||| |||| ||| ATTCTGATGG AAGTGTCACG TTCAATTCCT CCACAGGTTT .......... .......... 101 AATGAGTTTA TGTGACGTCT AGCGCACACA AAAGTTAAAA TCTTTCTCTT AAAATAATGT 122037 .......... .......... .......... .......... .......... .......... 101 TAATGCAGCC GTGAATGGAG ATGGTTTCGT AGCAAAGGAT ATCGGGTTTG AAAACACAG- 121978 | | || ||| |||| | | || ||| || | ||| | | ........TC CT-TTTGTCC ATGTGTTCGA AACGAAAGAT GTCAAGATTG TCTTCTTTGT 152 CTGGAGCAAT GAAGCACCAA GCCGTTGCAC TCC-GTGTAT CAGCAGACAA GACAGTTTTC 121919 ||||| |||| |||||||||| |||| ||||| ||| |||| | || || |||| ||| |||| CTGGA-CAAT GAAGCACCAA GCCGGTGCAC TCCTGTGTGT CAACAAACAA GACTTCTTTC 211 TACAACTGCA ACATTGATGG ATACCAAGAC ACGCTATACA CACATTCCTA CAGACAATTC 121859 ||| ||||| | || ||| ||||| | || || ||||||| |||||||||| |||||||||| TACTCCTGCA TCCTTTTTGG ATACCTAAAC ACACTATACA CACATTCCTA CAGACAATTC 271 TACAAAGATT GTTCCATCTC AGGAACCATT GACTTCATCT TTGGCGATGC ATCTGCCGTG 121799 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAAGATT GTTCCATCTC AGGAACCATT GACTTCATCT TTGGCGATGC ATCTGCCGTG 331 TTCCAAAACT GTAAGATGAT TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT 121739 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAAACT GTAAGATGAT TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT 391 GCCCAAGGAA GAAAAGACCA TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC 121679 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAGGAA GAAAAGACCA TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC 451 AGCGCTGAGC CAGCATTCAT TAACACCCAG CCACCAATCA AAGCCTATCT TGGACGACCA 121619 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCGCTGAGC CAGCATTCAT TAGCACCCAG CCACCAATCA AAGCCTATCT TGGACGACCA 511 TGGAAGGAGT ATTCCAGGAC AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT 121559 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAGGAGT ATTCCAGGAC AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT 571 GAAGGATGGG CTCCATGGAA TGGTAACTTT GCTCTAAACA CTCTGTATTA TGCAGAGTAT 121499 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGATGGG CTCCATGGAA TGGTAACTTT GCTCTAAACA CTCTGTATTA TGCAGAGTAT 631 CAGAACAGGG GACCAGGAGC AAATACTGAC AGAAGGGTTA AATGGGCTGG TTATAAGAAA 121439 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CAGAACAGGG GACCAGGAGC AAATACTGAC AGAAGGGTT- AATGGGCTGG TTATAAGAAA 690 AGCATTTCAC CACAGGAAGC TGAAAAATAT GCTCCTAATA TCTTCATTGA TCAAGATAGC 121379 |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCATTTCAC CACANGAAGC TG-AAAATAT GCTCCTAATA TCTTCATTGA TCAAGATAGC 749 TGGATTAAGA AGACTGGCAT TTCCTATTGA TG-AATCTGT AACAACTTTA ATTATAAATC 121320 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| || || |||| TGGATTAAGA AGACTGGCAT TTCCTATTGA TGAAATCTGT AACACTTTTA ATAAT-AATC 808 TTATCTTCTA CTGATTAAAA AATAAAA 121293 |||||||||| |||||||||| || |||| TTATCTTCTA CTGATTAAAA AAAAAAA 835 hqPGS_C01HBa0163B20.1-_SGN-U334754+ (122155 122117,122028 121293) ******************************************************************************** EST sequence 41 +strand 567 n (File: SGN-U314050+) 1 AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 61 TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 121 AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCATTT CAACCTCTAC AAAATCTGTT 181 CAAGCAATGT GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAGCC 241 AAGAACACTA GTGACCCAAA GGAACTTATA AAAGTTGCAT TTGAATCAAC CATAACTGAC 301 ATAAAAAATG CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCAATGA TCCTAGAACA 361 AAAGAGGCTC TAAATACTTG TGACGGTCTT CTTGATGTGT CTATTGATGA TCTCAGAAGA 421 TCGTTCGATA AAGTTGGCAC CTTTGATATT AACAAGATCA AGGATTATAC CGATGATCTA 481 AAAACATGGA TCAGTGCTTC GATTACTTAT CAAGAAACTT GCTTAGATGC TTTTCAAAAC 541 ACAAGTGGTG ACACTGGTGA AAAAATG Predicted gene structure (within gDNA segment 123774 to 121937): Exon 1 123174 123017 ( 158 n); cDNA 1 158 ( 158 n); score: 1.000 Intron 1 123016 122956 ( 61 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 122955 122547 ( 409 n); cDNA 159 567 ( 409 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-U314050+ 1.000 567 1.000 C PGS_C01HBa0163B20.1-_SGN-U314050+ (123174 123017,122955 122547) Alignment (genomic DNA sequence = upper lines): AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 123115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 60 TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 123055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 120 AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCATGT GTCACCATTA CCAAAAAGAA 122995 |||||||||| |||||||||| |||||||||| |||||||| AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCAT.. .......... .......... 158 TGCGAGCGAT GGTGGTGATG GAGCTAGCAA TGGTGGCATT TCAACCTCTA CAAAATCTGT 122935 | |||||||||| |||||||||| .......... .......... .......... .........T TCAACCTCTA CAAAATCTGT 179 TCAAGCAATG TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC 122875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGCAATG TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC 239 CAAGAACACT AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA 122815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGAACACT AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA 299 CATAAAAAAT GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC 122755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAAAAAAT GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC 359 AAAAGAGGCT CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG 122695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAGAGGCT CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG 419 ATCGTTCGAT AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT 122635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGTTCGAT AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT 479 AAAAACATGG ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA 122575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAACATGG ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA 539 CACAAGTGGT GACACTGGTG AAAAAATG 122547 |||||||||| |||||||||| |||||||| CACAAGTGGT GACACTGGTG AAAAAATG 567 hqPGS_C01HBa0163B20.1-_SGN-U314050+ (123174 123017,122955 122547) ******************************************************************************** EST sequence 55 +strand 929 n (File: SGN-U341110+) 1 AAAGCTGGAG CTCCCCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG 61 GTTTTTTTTT TTTTTTTAAA TATATTTAAC TTCAAATACT TTTTTTCTTC AAATATCACC 121 CAATTCATAT CGATGCAACT ACTTACTAGT AACTACAACC AAAAGCTTAC ATATTCTACT 181 CTGAAAACTC AAAAGCATAT ATATATCCAT ATCGATCATG GACTAACAAG AAAAAAAGAA 241 CTATCAATCA CATTCAGTTA CCATAAAACA CGATTTATTT ATTTAACAAT CTTGAAGGTC 301 AATTATAAGT GAAACTACAC TTATAACTAA ACTCCTTGTA CTAGTTGGAA CAAGCATTTC 361 TTAGCCTGTA ACCACGTTTT CTTGCATACT CAACAAGTTT ATCCAACTCT TTCTTATCAA 421 TAAGCCCATC ACCATTTTTA TCAGCCCGGT GAAGGGCTCG GCCCGCTCGA TATCCCGGAA 481 AAGTGGACCC CAGCTGCCGG AATGCCTCCG TGAGATCCTC TTTAGTGAGG TAGCCATCTC 541 TGTTGAAATC ACATTGTTTG AAGATATTTA TCAATTGAAC TTCAGTCAAA GGTACTTGTC 601 CACAGGTACA TCGTATGATG TTCCTGGGGC GGAAAAAATC AAACATATTG TAATTTTTAT 661 CCGAACAAGA TTTTTTAATT TTTGGACATA CGAAGGGGAA CAACCTTAGT TTCAAGAGTT 721 TAAGAAACGT CCGAAAGAAA GTACTCTTGG AGAAAGATTC CATGAGAGAA ACTCTACCTT 781 AATCGATGTT CAAACTTTAA TGGTGCTGCC CGGAAAACTC CTCCAGACAC TCCCATTCAC 841 TTCAAAGTAT ACTCTCTCGA CGAACTCTCN TAANNNCTGA CGTTTGATAC TTTTTCTTTG 901 NTAAAATTTT TTTTGTGAGT CTTCAGCAG Predicted gene structure (within gDNA segment 134102 to 125681): Exon 1 128113 128091 ( 23 n); cDNA 664 685 ( 22 n); score: 0.739 Intron 1 128090 127232 ( 859 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 127231 126982 ( 250 n); cDNA 686 924 ( 239 n); score: 0.902 MATCH C01HBa0163B20.1- SGN-U341110+ 0.902 273 0.294 C PGS_C01HBa0163B20.1-_SGN-U341110+ (128113 128091,127231 126982) Alignment (genomic DNA sequence = upper lines): AACCCAAATT TTGAATTATT TGGATATCAT TTATATTTTT CATTGATTTT TGTTCTAATA 128054 ||| | || || |||| || ||| AACAAGATTT TTTAATT-TT TGG....... .......... .......... .......... 685 TTCATAAATT TAGAACTCTA AGTTAAGTCT CAACATTTTC GTGAAATAAT AAATTTTTTT 127994 .......... .......... .......... .......... .......... .......... 685 TTTTAATTAG AATTCTAAAT TAAATTTCAA TCATTTACAT GAAAGAATAA TTTTCTAATT 127934 .......... .......... .......... .......... .......... .......... 685 TAATTAGAAT TCCAATTTAA ATCTCAATAT TTACATAAAA GAATTAATAT TCTATTTTTA 127874 .......... .......... .......... .......... .......... .......... 685 ATTAAAATTC TAAATTAAAT CTCAATGTTT ACATAAGAGA ATTTATTTTC CAACTTTAAT 127814 .......... .......... .......... .......... .......... .......... 685 TAGAATTTTA ATTTACTATT GTTATTATTT TTAATTAAAT TCGCTTGAAT AGGGAGGTTG 127754 .......... .......... .......... .......... .......... .......... 685 AGGGTTCGAA CCCCCACAGC CCCCTTATTT TTCCTCTCAT TTTCGCTGAA GAGGAGGCTG 127694 .......... .......... .......... .......... .......... .......... 685 TGAGGTGGTG GGTTCGAACC CCCACAGCCC CTCTATTTTA TTTTATTTTT TAATTCTTTG 127634 .......... .......... .......... .......... .......... .......... 685 ACATCCAAAA ATTTCCAGAT TCTTTTTAAA CCTATTTCTA TGTTTTTGGA AATTTATTCC 127574 .......... .......... .......... .......... .......... .......... 685 ACTATTTTTC TGCACTTTTT CATCAAGTTT CACATTAGTT CTTAGGGAGA TTTCATGGTT 127514 .......... .......... .......... .......... .......... .......... 685 CATTCACTTC ACTATGCTTC ATCAAAATGA ACATCACATT GCACACCCAT TTCACACATA 127454 .......... .......... .......... .......... .......... .......... 685 AAACACATGA TAAATAAACA ACTTATATAC CCCAAAACAA TGCCTAAAAC ACTGCCCTAT 127394 .......... .......... .......... .......... .......... .......... 685 ACACACCCAT ACATCAACTT TTTCCGGTCA TATTTTGATG ATCATTATCG CGATTTCCCG 127334 .......... .......... .......... .......... .......... .......... 685 CACATAAACA CATTCATATT TAATTTAAAC ACATCATTCA TGCAAAAATC TAGCAGCACA 127274 .......... .......... .......... .......... .......... .......... 685 ACATACCCAT CCTACAAATT CATTAGGGAG CTAAGGACAA GGACATACGA AGGGGAACAA 127214 |||||||| |||||||||| .......... .......... .......... .......... ..ACATACGA AGGGGAACAA 703 CCTTAGTTTC AAGAGTTTAA GAAACGTCCG AAAGAAAGTA CTCTTGGAGA AAGAATTCCA 127154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| CCTTAGTTTC AAGAGTTTAA GAAACGTCCG AAAGAAAGTA CTCTTGGAGA AAG-ATTCCA 762 TGAGAGAAAC TCATACCTTA ATCGATGTTC AAACTTTAAT GTTGCTGCCC GGAAAACTCC 127094 |||||||||| || ||||||| |||||||||| |||||||||| | |||||||| |||||||||| TGAGAGAAAC TC-TACCTTA ATCGATGTTC AAACTTTAAT GGTGCTGCCC GGAAAACTCC 821 TCCAAACCAC TCCCAATTCA CTTCAAAGTA TACCTCTCTC GACGAACCTC TCTT-AGCCT 127035 |||| | ||| |||| ||||| |||||||||| || ||||||| |||||| ||| || | | TCCAGA-CAC TCCC-ATTCA CTTCAAAGTA TA-CTCTCTC GACGAA-CTC TCNTAANNNC 877 TGACGTTTTG ATTACTTTTT CTTTTGCTTA AAAAAATTTT TTGTGAGTTC TTC 126982 ||||| |||| | |||||||| | |||| | |||| |||| ||||||| || ||| TGACG-TTTG A-TACTTTTT C-TTTG-NT- AAAATTTTTT TTGTGAG-TC TTC 924 hqPGS_C01HBa0163B20.1-_SGN-U341110+ (128113 128091,127231 126982) ******************************************************************************** EST sequence 48 +strand 867 n (File: SGN-U337340+) 1 CTCCCCGCGG TGGCGGCCGC TCTAGAACTA GTGGATCCCC CGGGCTGCAG GAATTCGGCA 61 CGAGGGGAAG ATGGAGAACG TGAGAGAGGG AGTTTAGAAG CGTGAGAGAG AGAGGGCTAA 121 TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 181 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 241 ATACCTATTT ATTCTTATTT ACATAATTCT CTTTTTTTTT GAATCGTTAC ATGAGTATTG 301 GATGTTCTGT TGTAGTCATT TAAGGTTCAC CAGAGTGGTT TATTCCTAGT TCATTCTTCT 361 TGATCAAGAG AGGTTGTCGG GTGGTGTTCT TTTGGCTGTT ATGTGATCAT TGCCACATTT 421 TGACTCATTT AACTGCAGAA TAGTAATACT TTTGTTTCCC TACATCTCTT TTGAATGATG 481 ATTCTTTACT TAAGCTACAT ATTTCAACAT GTCTAATAAA AATGTTGTCC AGTCCAGTTA 541 TTATATTTTT GTAGTCTTTT TCCTTTGGTT GAGTGACTGA GAGTCTTGCT TGAGTTAATA 601 TTTGACAAGT CACTCATACA GACCGCTTTA GATATCTTTC CTTGTTCTCG GAATATAATT 661 TTTTTGAGTG TATCTGGGAA CTATTGTTTC TTGGGTATCT TTAGGTTGAG TGTATATTTT 721 ACCTTCCACG GCAGTAATGA GCATTTTTCT ATGGCAGTAC ACCTAGAAAT CCGCATAATC 781 CAAAAAGGTA CACAGGTGGG TNCTTCCTCA GGTTCAGCTG CAATTGTCGC TTCTGGATTT 841 GCTCAGCAGC ATTGGAACAG ATGCTGA Predicted gene structure (within gDNA segment 128191 to 120182): Exon 1 126941 126703 ( 239 n); cDNA 66 297 ( 232 n); score: 0.958 MATCH C01HBa0163B20.1- SGN-U337340+ 0.958 239 0.276 C PGS_C01HBa0163B20.1-_SGN-U337340+ (126941 126703) Alignment (genomic DNA sequence = upper lines): GGAAGATGGA GAACGTGAGA GAGGGAGTTT AGAAGCGTGA GAGAGAGAGA GGGCTAATTG 126882 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| GGAAGATGGA GAACGTGAGA GAGGGAGTTT AGAAGCGT-- GAGAGAGAGA GGGCTAATTG 123 GATTAGGAGA CTAATTCAAG AATTAGTCAA ATAACATTAA AATAAATAAA TACAAATCTG 126822 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTAGGAGA CTAATTCAAG AATTAGTCAA ATAACATTAA AATAAATAAA TACAAATCTG 183 TTTTATTTAT TTATTTATTT ATTCATTTAA AACGTGAAAG GACAATTATG CCCTTAAATA 126762 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTATTTAT TTATTTATTT ATTCATTTAA AACGTGAAAG GACAATTATG CCCTTAAATA 243 CCTATTTATT CTTATTTACA TAATTCTCTT CTCTTTTTTT TCGAATCGTT ACAATAATA 126703 |||||||||| |||||||||| ||| | || | || ||||||| | |||||||| ||| | || CCTATTTATT CTTATTTACA TAA-T-TC-T CT-TTTTTTT T-GAATCGTT ACATGAGTA 297 hqPGS_C01HBa0163B20.1-_SGN-U337340+ (126941 126703) ******************************************************************************** EST sequence 35 -strand 973 n (File: SGN-U321279-) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGAGCTTCA GAACATTTAT CTTCTAATCC TGAGCTTTTC ACTTACCTTA CTCCTTTTTC 601 ATGATTCTTC GAAGGTAAAA GCTACTCATA TAGGAAGTGT TGCTACTCTT TTCCCTAATT 661 TGATCATTCA TAGAGTTCTT TATGTTCCTT CTTTTAAAAT GAATCTTCCA TCTATTCACA 721 CTGGTATGCA ATTAGAGTAT TTTATCATTT CTCCCTTCTA ACAGGAAGAA AAATAAAAAG 781 GCATGACGAA ATTTGCAACA TTCCAGAAAA ATACAATTCA CTGAACTACC AAATCCTGAT 841 TAACTAGTAA GTAAATAGAA GCTATCTCCT AAAAAGGGTC ATGTTGATGT AATAGAGAAA 901 TACTGCTCTA TCAAAACTTC CTCAGCCTGT ACTTGTTCAA AACTTGTTTC TAGACCTCCA 961 CTGGCAAACC TGA Predicted gene structure (within gDNA segment 127584 to 118040): Exon 1 126884 126703 ( 182 n); cDNA 10 188 ( 179 n); score: 0.978 Intron 1 126702 123202 (3501 n); Pd: 0.000 (s: 0.92), Pa: 0.366 (s: 0) Exon 2 123201 123193 ( 9 n); cDNA 189 197 ( 9 n); score: 0.444 Intron 2 123192 119023 (4170 n); Pd: 0.507 (s: 0), Pa: 0.636 (s: 0) Exon 3 119022 119010 ( 13 n); cDNA 198 210 ( 13 n); score: 0.769 MATCH C01HBa0163B20.1- SGN-U321279- 0.978 204 0.210 C PGS_C01HBa0163B20.1-_SGN-U321279- (126884 126703,123201 123193,119022 119010) Alignment (genomic DNA sequence = upper lines): TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 126825 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 69 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 126765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 129 ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTCTTTT TTTTCGAATC GTTACAATAA 126705 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||| | ATACCTATTT ATTCTTATTT ACATAATTCT CTTCT-TTTT TTTT-GAATC GTTACAA-AT 186 TAGTATTGGG GTTTCCTCAC ACATTCATAA AAACGAGAAC CCTATCTTGA GGGATTGACC 126645 || TA........ .......... .......... .......... .......... .......... 188 AACTATGAAT TAAATCTTAT GTATGTTTAT GGGTAAAAAT ATTTTGGTCC GTATCGTGAG 126585 .......... .......... .......... .......... .......... .......... 188 TTTATTTATT GATTACATAT GACGAACATC CCCTTTTCAA AATATTAACA TAGGTCCTCA 126525 .......... .......... .......... .......... .......... .......... 188 CACATACACT AAAAGATGAC GAAAATAGTC ATTTACCTTT ACAATATGTC AAAATGTATC 126465 .......... .......... .......... .......... .......... .......... 188 ATGACTCTAT TTATTAAAAA AAGAGTAATA CATTTTAGGT GAACAAATAA GCGTGGAAAA 126405 .......... .......... .......... .......... .......... .......... 188 GTGTTAGAGA AGACTAGTAC GGGCCCTCTA ACATTATTGT TCCCGGACCA TCCACCTTTT 126345 .......... .......... .......... .......... .......... .......... 188 CCTTCCCCTT TGAGTGGCTC GGTGAGATTA GATTTCTAGA ATGAAATGAG GTGATAAAAA 126285 .......... .......... .......... .......... .......... .......... 188 GAAACGATTG CTCACAGGAG ATCCCTATTC ATGGAAGCAC CGTGTAATTA AGGTTAAGGG 126225 .......... .......... .......... .......... .......... .......... 188 GAAAATCAAA GTGGGTTCCT AAACACAAAC TAAAGCTAAG AGCTTCAGAA GCTTACCTTA 126165 .......... .......... .......... .......... .......... .......... 188 TTAGCATATA TCATATCATA TCAAATCATA AAATATTATT ATAAGTGGGA AGCTCCTAAC 126105 .......... .......... .......... .......... .......... .......... 188 TTAAAAATTG AATTACCATT CTGCCCTTAT TTTATTTCTA AACTAATATA AATATTAATA 126045 .......... .......... .......... .......... .......... .......... 188 TAAAATTAAT TTAATATTAA AGAATAATTT TATTTAAATT CATGCATCTA GACACAATGG 125985 .......... .......... .......... .......... .......... .......... 188 TTCACATTCT TTGGTACAGT AAATTTTCTA TCCCATCGTT TCTCTCTCTC TCTCTCTCTC 125925 .......... .......... .......... .......... .......... .......... 188 TCTCTATATA TATATATATA TATATTACTG TATAACCTTC ACATTAAATT AAAATATGAT 125865 .......... .......... .......... .......... .......... .......... 188 TAAATATCTA ATCATTTAAA TGCTAAGTAA TAGTTATAAT ATATTATACT AAATAAAAAA 125805 .......... .......... .......... .......... .......... .......... 188 AATAAGAAGT TATAAAGTCA AACATTGAAA GGTAGAAATA TTTTTTAGAA AAGTGTTAGA 125745 .......... .......... .......... .......... .......... .......... 188 AATCATTTCA TAAAAGTTGT TAGGAATTAC TCTTTTTTTA AATAAAAACT TTTTATCTAA 125685 .......... .......... .......... .......... .......... .......... 188 TTCTTTTATG AACGGTTACG TTTAAATGGA AATTTGTTAA TTAGATAAAA CATTTTTTTA 125625 .......... .......... .......... .......... .......... .......... 188 TATATAAATA TTTGATAATT AAAGCATTTA TCCTTTATTC TTTTTTCATA ATTGGTGTGG 125565 .......... .......... .......... .......... .......... .......... 188 TTAAATGGAT TAAATTTGTT ATCCTTTCTC TGTAATTAGT ATAATTAAAT GTATTGAATT 125505 .......... .......... .......... .......... .......... .......... 188 ACTCCCCGTT CGGTATTGTT TGTCATGATT TCTATTTTTA GAGTCAAACT ATAAAAACTT 125445 .......... .......... .......... .......... .......... .......... 188 TTACTAACAT TTTAAGATGT ATTTTTTCAT CATATTAATA TGCAAAAAAT TGTAATTTAT 125385 .......... .......... .......... .......... .......... .......... 188 AGTAATTTTC ATATAGTTTT AGAGTATCTA AGTTTTTTGT CAAATATCGA ATTAATATGA 125325 .......... .......... .......... .......... .......... .......... 188 TCTAATTTAA CATTGAAAAT TAAGCAAATT GGCTTTCGAA AAGCGCAACA TGACGAACAA 125265 .......... .......... .......... .......... .......... .......... 188 TTTCGGACGG AGGAAGTATT AGTAAAAACA ATCAACTTTT CTCTCCCCGT GTCTAGGATC 125205 .......... .......... .......... .......... .......... .......... 188 ATTAACTTCT GAAAATTAAC TTAAATATCT CTTCACATTT TCATCTTATC CTATAAATCT 125145 .......... .......... .......... .......... .......... .......... 188 TTAGCTATAT ATATGTATCA TGAAAAATTA ATTTTCCTTT ACTAATTGTC TTTTTTTTTA 125085 .......... .......... .......... .......... .......... .......... 188 TGTGAATCAC TAGGCAATTT TCAGAAACTT ATTTTGTTTT GAAATATTAA TATTTGTTTG 125025 .......... .......... .......... .......... .......... .......... 188 ATCCTAGTTA GAATAATATT TTGTATCATA GTTTTATCTT TAAAGTTTTA GATGGGGTTT 124965 .......... .......... .......... .......... .......... .......... 188 TTTTCAATTG TTTATAAATA TTTGAGTTTT TGTGGAACAA TTATTATACT CTTATTTTGT 124905 .......... .......... .......... .......... .......... .......... 188 CATATATTTC CTGATTTGTG TGTTTACTTC TCTTTTTTCT ATGTATTTTT AATTTTTAAT 124845 .......... .......... .......... .......... .......... .......... 188 TGATATGCTA AATTTCTTTT CAGGTCATTG TCACATTAAC CGTTTGGATA TATATATATA 124785 .......... .......... .......... .......... .......... .......... 188 TATATAGACA CATACACATG CACACTAAAA TTGAGACAGA AAAAGTTGAA AGTTGAAAGT 124725 .......... .......... .......... .......... .......... .......... 188 ATCAAATTAT CCTTTACGGG TTGAAAAGTC ATTTAAGTAT TTAATCCAAA TATTTAATAA 124665 .......... .......... .......... .......... .......... .......... 188 TTGGTATTTA AAAGTAAATT TACCTATCTT TTAATAATAT TTCATTAAAA CGAAACAATA 124605 .......... .......... .......... .......... .......... .......... 188 GAAAACAAAT ACATTGTCAC TCATTAGTTC ATTCAATTCA ATATGGTGGA ATTGCTTTCA 124545 .......... .......... .......... .......... .......... .......... 188 TATTCCACAA TTATTCAACC TTTAGAATTA CTTTTTTAAT ATTTTAGATA TGTATAATTT 124485 .......... .......... .......... .......... .......... .......... 188 TCGATGATAA ATATAAACTT TAAACTAACA GTATTTAGGA AGTCCAAGTA ACGGGCATAT 124425 .......... .......... .......... .......... .......... .......... 188 CTATGTGGTC AAGAAAATCA TTTAACTTTT TCTTGCTCTT TATGAATTTT CAATTATTTT 124365 .......... .......... .......... .......... .......... .......... 188 TAAATTTATA TGCTATTTAT CATTCATAAG TAGTGAAACA CTTGAATCAT TATTAAGGCT 124305 .......... .......... .......... .......... .......... .......... 188 TTTGAATTTT GATTGGTTAG GAGATAAGGT ATCATCAAGA ACTCTACTCA TGTATTTTTT 124245 .......... .......... .......... .......... .......... .......... 188 ATTATTATAT ATATTGTTAT AATTAAAATC TTAAGAAGGA TATGAATGTT ATATTTGTTC 124185 .......... .......... .......... .......... .......... .......... 188 TTATCTGTTA ACATTTTTTG TATTCTTTAT CGATTTATAC TTCTTTAATT TAATCTTCTA 124125 .......... .......... .......... .......... .......... .......... 188 TGAAATTATG AATGTTATAA ATCTATTTTT ATTAGTGCTG AAATTACTAA TTTATGGCTT 124065 .......... .......... .......... .......... .......... .......... 188 TTATATTCGT TTTTAAATAT ACTTTTATAT TTTCTTTCTT TTATCATTTT GTTACTTGTA 124005 .......... .......... .......... .......... .......... .......... 188 TGGTTTCTTA AGTAACTACA TATTTGTGTG CTTACTAAAT GGAAGCGTAA TGAGAGATTA 123945 .......... .......... .......... .......... .......... .......... 188 TTAAGGATAA GCCATATAGA TATATTCATA TAATTAAAAG CTAATAGTAT CTTAATTAGT 123885 .......... .......... .......... .......... .......... .......... 188 TTTTCAAATT TCTTGCTTGA TGTTCAATGC ATTATTCGAT TATTATGAAT TTTATATAAT 123825 .......... .......... .......... .......... .......... .......... 188 GAATAAAATA TAAATAGATA AAACTAATAT TTTTAATTTC AACATTTTCT ATATAATAAT 123765 .......... .......... .......... .......... .......... .......... 188 TGTATGGAAC AAACATGCAA CGAACGTTTG CAAAAATTAG TATATCAAAA AAGTAGAGTC 123705 .......... .......... .......... .......... .......... .......... 188 TTTAATTCGA ACCTAAATAA TAAGAAAAAC GAAACATAGA ACCGGGTAAG GAGAGGGAAA 123645 .......... .......... .......... .......... .......... .......... 188 GCCAAAACTT ACTTCTTTTA GGGGGTTAAT TCCCTTTACA CGTTAATTTA AAAAGATAAT 123585 .......... .......... .......... .......... .......... .......... 188 TTAGATATGT TTTATCTGGA TTAAGATCAA AAACTTGTCG TCATACTTAT GTTAGTTATT 123525 .......... .......... .......... .......... .......... .......... 188 ATTGTTCATT GAGTTAAAAA GATATGCCCA CCTATTTTGT ATCCAATACT TATTTTTTAA 123465 .......... .......... .......... .......... .......... .......... 188 ATTAGAGTAA TTATAAAAAA AATTGTTATA TTATAAGGAT AAATCAGTCC ATATTGTTCC 123405 .......... .......... .......... .......... .......... .......... 188 CTAGTTTGAA ACAGACAGGA ATTGAAATGA ACATTAAAAT TATATTAAGC AAACCTTAAA 123345 .......... .......... .......... .......... .......... .......... 188 TGTAGGACAA AACAAAACAA AGTTAAAAAA ATGGAAACAC TAACAACCTC CTCTTTTTCT 123285 .......... .......... .......... .......... .......... .......... 188 TAGACCATTT CATATCCTCA CATATTTAAC AGAAACCAAC ACTATAAATA GTTTCTCCAT 123225 .......... .......... .......... .......... .......... .......... 188 TTTTTAGGAA ATACATCTTT CAGAGCCAAG GGGCATGTAC GGTCTCTAAT AAAAAATCCC 123165 | | | | .......... .......... ...ACCTATG TA........ .......... .......... 197 CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT TGGGAAAAAT 123105 .......... .......... .......... .......... .......... .......... 197 ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT AGCCTCAATT 123045 .......... .......... .......... .......... .......... .......... 197 CTTGTGGTGG CTTGTGTTGT TGCAGCATGT GTCACCATTA CCAAAAAGAA TGCGAGCGAT 122985 .......... .......... .......... .......... .......... .......... 197 GGTGGTGATG GAGCTAGCAA TGGTGGCATT TCAACCTCTA CAAAATCTGT TCAAGCAATG 122925 .......... .......... .......... .......... .......... .......... 197 TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC CAAGAACACT 122865 .......... .......... .......... .......... .......... .......... 197 AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA CATAAAAAAT 122805 .......... .......... .......... .......... .......... .......... 197 GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC AAAAGAGGCT 122745 .......... .......... .......... .......... .......... .......... 197 CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG ATCGTTCGAT 122685 .......... .......... .......... .......... .......... .......... 197 AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT AAAAACATGG 122625 .......... .......... .......... .......... .......... .......... 197 ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA CACAAGTGGT 122565 .......... .......... .......... .......... .......... .......... 197 GACACTGGTG AAAAAATGAA GAAATTGTTA AAGACTGCAG GGGAGCTTAC TAGCAATGGC 122505 .......... .......... .......... .......... .......... .......... 197 CTTGCTATGA TTACTAGCTT TGGTGACATG CTTACTAACA TGAACATTCC TGGTATTAGC 122445 .......... .......... .......... .......... .......... .......... 197 CGCCGATTAT TGGCAGATGA CTACACATCA TTCGTTGAAG ACGGTTCTCG TAGGCTTCTT 122385 .......... .......... .......... .......... .......... .......... 197 CAAGTTTCAA ATACCAAGCC TAATGCTGTG GTTGCTCTAG ATGGCAGCGG ACAATTCAAG 122325 .......... .......... .......... .......... .......... .......... 197 ACCATCAAAG AAGCCCTCAA AGGTGTGCCC CCAAAGAACA TTCAACCCTA TGTCATCTTA 122265 .......... .......... .......... .......... .......... .......... 197 ATCAAGGCAG GTGAATATAA GGAGATGGTC GATATCCCAA GAGGGGTGAC AAACGTTGTG 122205 .......... .......... .......... .......... .......... .......... 197 TTTATTGGCG AAGGCCCAAC CAAGACAAAG ATTACTGGCA ACAAGAACTA TGCTGATGGC 122145 .......... .......... .......... .......... .......... .......... 197 ACTGCCACTT TCCATACCTC CACCGTTGGT AAGTCAGATC ATTCAATTAA TGAGTTTATG 122085 .......... .......... .......... .......... .......... .......... 197 TGACGTCTAG CGCACACAAA AGTTAAAATC TTTCTCTTAA AATAATGTTA ATGCAGCCGT 122025 .......... .......... .......... .......... .......... .......... 197 GAATGGAGAT GGTTTCGTAG CAAAGGATAT CGGGTTTGAA AACACAGCTG GAGCAATGAA 121965 .......... .......... .......... .......... .......... .......... 197 GCACCAAGCC GTTGCACTCC GTGTATCAGC AGACAAGACA GTTTTCTACA ACTGCAACAT 121905 .......... .......... .......... .......... .......... .......... 197 TGATGGATAC CAAGACACGC TATACACACA TTCCTACAGA CAATTCTACA AAGATTGTTC 121845 .......... .......... .......... .......... .......... .......... 197 CATCTCAGGA ACCATTGACT TCATCTTTGG CGATGCATCT GCCGTGTTCC AAAACTGTAA 121785 .......... .......... .......... .......... .......... .......... 197 GATGATTGTA AGGAAACCAG GTGCAAACCA AGCTTGTATG GTCACTGCCC AAGGAAGAAA 121725 .......... .......... .......... .......... .......... .......... 197 AGACCATCGT GGGGTCGGTG CAATCATTTT GAGGAACTGT GAAATCAGCG CTGAGCCAGC 121665 .......... .......... .......... .......... .......... .......... 197 ATTCATTAAC ACCCAGCCAC CAATCAAAGC CTATCTTGGA CGACCATGGA AGGAGTATTC 121605 .......... .......... .......... .......... .......... .......... 197 CAGGACAATT ATAATGCAAA GTCAGATAGA CGCGTTCATT GATCCTGAAG GATGGGCTCC 121545 .......... .......... .......... .......... .......... .......... 197 ATGGAATGGT AACTTTGCTC TAAACACTCT GTATTATGCA GAGTATCAGA ACAGGGGACC 121485 .......... .......... .......... .......... .......... .......... 197 AGGAGCAAAT ACTGACAGAA GGGTTAAATG GGCTGGTTAT AAGAAAAGCA TTTCACCACA 121425 .......... .......... .......... .......... .......... .......... 197 GGAAGCTGAA AAATATGCTC CTAATATCTT CATTGATCAA GATAGCTGGA TTAAGAAGAC 121365 .......... .......... .......... .......... .......... .......... 197 TGGCATTTCC TATTGATGAA TCTGTAACAA CTTTAATTAT AAATCTTATC TTCTACTGAT 121305 .......... .......... .......... .......... .......... .......... 197 TAAAAAATAA AAATAACTAT CCAACTTATG TTTATTTAGT TGCTTTTCTA GCTATGTCAT 121245 .......... .......... .......... .......... .......... .......... 197 GTAATACTTA ATTAGTTTTA GTTTATTCAT ATTTTATGTC TTAGCTTATG CAAATTTCGA 121185 .......... .......... .......... .......... .......... .......... 197 CTTGGCTTTC AGCTTGTTTT ATTCTTGTTT TCCCCTCTAA TTTGCATGAT ATCAACCTAA 121125 .......... .......... .......... .......... .......... .......... 197 ATTCTACGTC ATATAGAATT ACATTGTTAG CAAGTTCTAG CACCACTGAA TAAGTAATTA 121065 .......... .......... .......... .......... .......... .......... 197 TAGAAGTTAG CATGACAATT AGAGTAGCAA AAGTTGAGTA CTACACATTT TTACTTGTCA 121005 .......... .......... .......... .......... .......... .......... 197 TGTGTCATGA CTCAATTCAT CAGGTCGTGT AGGAACCTAC TTCAATATAT AGATAGGAGA 120945 .......... .......... .......... .......... .......... .......... 197 ACCTAAGACT GGCACCGGAC CAGAACGGGA CCATCGGACC GGTTTATTGA CCGATACCGG 120885 .......... .......... .......... .......... .......... .......... 197 GATGAACCAG ACCGGAAATT CCGGGACAGA TACTCGGTTT CGTTCCGTTC CGTTCATTAT 120825 .......... .......... .......... .......... .......... .......... 197 ATGCCAGAAC GGATCGGGAT GGGATAAACG GGATGACAAC ATCTAATTAT TCAAAAAATG 120765 .......... .......... .......... .......... .......... .......... 197 ATTTTTCTGA ATTACGAAAA TATGAATATT TTTTTATTTT TCTATTTTTA AATTTATAAT 120705 .......... .......... .......... .......... .......... .......... 197 GTAATTTTTT TACTTAAGCT TATTTTAAAG ATATATTTTT AAAATTTTTT TACTTATTAA 120645 .......... .......... .......... .......... .......... .......... 197 GTTTGCAAAT TAAGTCTATT TAAGTTTTCA AGATTTAAAT CTTTCTAAGT TTATAAGTTA 120585 .......... .......... .......... .......... .......... .......... 197 TTACTATTAT TTATTATTAT GTTATAATTT ATAAGTTATA TTTAAGGAAA ATGCACAAGT 120525 .......... .......... .......... .......... .......... .......... 197 ACCTGCTCAA CCTATGTTTG AAATCTCAAA GACACACTTA TATTATATTA AGGTCCTATT 120465 .......... .......... .......... .......... .......... .......... 197 ACCCCCTAAA CTTATTGTAT AACTATTTTT CTACCACTTT TCGGCCTACA TGACACTATC 120405 .......... .......... .......... .......... .......... .......... 197 TTGTAGGCCC AACGTATGTT GACATTTTTC TTCAAGCTAG TGTCACGTAG GACGAAAGGG 120345 .......... .......... .......... .......... .......... .......... 197 ATAGAAAATT ATTTATAGAA TAAGTTCAGG GGGGTAATAG GACCTGAGTA TAGTATAAGT 120285 .......... .......... .......... .......... .......... .......... 197 GTGTCTCTGA GATTCCGGGC ATAGGTTGAG GGGGTACTTT TGCATTTTCC CTTATATTTA 120225 .......... .......... .......... .......... .......... .......... 197 TTACTTGTAG TTTAAATGAC TTAAATTTGT AATTTTAAAA AATTAAATAA AAATAAGGAT 120165 .......... .......... .......... .......... .......... .......... 197 AAAACAATTA CACAAATTAT AATATATAAA TTATAATTTA TAAATATATA ATATAAATTA 120105 .......... .......... .......... .......... .......... .......... 197 ATTAAAAAAT ATTGATTATC TTTCTGCTCG AAAACCAAAC CAACATCTAC AATATTATGA 120045 .......... .......... .......... .......... .......... .......... 197 ATATACCGTA GAATCCATTT TACAGTCTAC CAATGATCCT TTCCAGGATC ATACATGTAC 119985 .......... .......... .......... .......... .......... .......... 197 ATGCTTACAA CGTCAACAAC GTGTGAAATA TCTGGCCTTG TGCAAACCAT TACATACATC 119925 .......... .......... .......... .......... .......... .......... 197 AAGCTACCGA TAGCATTCAT GTATGGTACT TTTGACATAT TCTCATTCAG CTTCATTCTT 119865 .......... .......... .......... .......... .......... .......... 197 AGGTGACATA GCATCACTAA GCTTAAAATA AGGAGCAAGT GGAGTGCTAA CCGATTTCGT 119805 .......... .......... .......... .......... .......... .......... 197 TTTGTCATTC ATACCGAATC AGTTTAGTAC TCTCTTCAAA TATTCTTTCT GAGATACATA 119745 .......... .......... .......... .......... .......... .......... 197 GAGTTTCTTT GAATGTCCAT CTCTTTTTAT CTCCATGCCA AGAATACTCT TTGCCTCACC 119685 .......... .......... .......... .......... .......... .......... 197 CAAATCCTTA ATCTCAAACT CCTTTCTTAG TTGAATCTTT AGCTTCTCAA TTTCCTCTTG 119625 .......... .......... .......... .......... .......... .......... 197 ACTTTTAGAA GTTATCAACA TATCATCAAC TTTTAGGAGA AGATATATAA AGGAATCATC 119565 .......... .......... .......... .......... .......... .......... 197 TTCAAGCTTA CGCAAATAGA GACAATGATC GTATTTGCTT CTTATGTACC TTTTGTCGCA 119505 .......... .......... .......... .......... .......... .......... 197 ACATAAACTT GTCAAATCAT TTGTACCATA TGAAGATTGT TTCAATCCAC ACAACAATTT 119445 .......... .......... .......... .......... .......... .......... 197 TTTCAGTTTG CACACCATAT TTTCTTTTCC ATCAACTTTG AATCCTTCTA GACGAGTCAT 119385 .......... .......... .......... .......... .......... .......... 197 GTAGATTTCC TCTTCTAAGT CTCCATGTAT TACATCCAAC TTAACTAGTT CCAAATTCAA 119325 .......... .......... .......... .......... .......... .......... 197 CTATGCTACA AAGCCAACAA AACTCTAATG GAGGAGTATT ACAACTGGAG AAAATACCTC 119265 .......... .......... .......... .......... .......... .......... 197 ATTATAGTCA ATTCCCTCTT TTTGAGTGTA TCCTTTCTCC TCTAATCTTG ATTTGTAGAA 119205 .......... .......... .......... .......... .......... .......... 197 AATATCGTCT TTCTTAGGAA ATCCTTCTTT CTTTGTAAAT ACCCATTTGC ACCCAATTGC 119145 .......... .......... .......... .......... .......... .......... 197 TTTCTTGCCC TCTAGGAGAT TGGCCAATCT TCATGTATGA TTCTGATGAA GGGCCTGCAT 119085 .......... .......... .......... .......... .......... .......... 197 TTCTTCATCC ATGACAATCC TCCACTTATC TTCTTGTAAA CTTTGGACTG CGTCTTGGTA 119025 .......... .......... .......... .......... .......... .......... 197 AGTGGTAGGA ATGAC 119010 ||| || ||||| ..AAGTAAGA ATGAC 210 hqPGS_C01HBa0163B20.1-_SGN-U321279- (126884 126703) ******************************************************************************** EST sequence 19 -strand 851 n (File: SGN-U337341-) 1 AAAATCCATT TCATTTTCCC TTTAACTTTT TTGGGGGCCT TTACATAAAG AACCTTCATT 61 TCCCGGTAAC AATTTTTAAT TTCAAGAAAA ACATGATTTG ACCTTTCAAG CGATTTCCAA 121 GGTACACAAA CATATTCATA TTCATCGGCG AAAACACAAT ATACCTTTAA ATTCTACCAG 181 CATTCATACC CAACCTAAAA TTCATTGGGA GCTAGTGACA AGGACATACA AAAGGGAACA 241 ACCTTAGTTT TCGGAATGAA TATCTTGAAC CTTAAGAGGT CTCTTGGGAA AGGGACCGAG 301 AGAGAAGAAA ACTCATACCT TAATCGATGT TCAAACTTTA ATGTTGTTAC CCGGAAAACT 361 CCTCCAAAGC ACTCCCAATT CACTTCAACG TACACCTCTC TCGACAAACC TCTCTTAGCC 421 TTGACGTTTT GATTACTTTT TCTTTTGCTT AAAAAATTTT TGTTAGTTCT TCAAGCATGA 481 AAACTGTTGA TGTTTTGTCA GAAATAATGT GAGGAAGATG GAGGACGTGA GAGAGGGAGT 541 TAAGAAGCGT GAGAGAGAGA GGACTATTTG GATTAGGAGA CTAATTCAAG AATTAGTCAA 601 ATAACATTTA AAATAAATAA ATACAAATCT ATTTTATTTA TTTACTTATT TATTTATTTA 661 TTCATTTAAA ACGTGAAAGG ACAATTATGC CCTTAAATAC CTATTTATTC TTATTTATAT 721 CATTCTTTTT TTTTGAATCG TTACAGTGAC CCTTTTATGC CTAGGGTAGC TCGTGCCGAA 781 TTCCTGCAGC CCGGGGGATC CACTAGTTCT AGAGCGGCCG CCACCGCGGT GGAGCTCCAG 841 CGTTTTCAAA A Predicted gene structure (within gDNA segment 130837 to 124204): Exon 1 127307 126709 ( 599 n); cDNA 152 745 ( 594 n); score: 0.826 MATCH C01HBa0163B20.1- SGN-U337341- 0.826 599 0.704 C PGS_C01HBa0163B20.1-_SGN-U337341- (127307 126709) Alignment (genomic DNA sequence = upper lines): AAACACATCA TTCATGCAAA AATCTAGCAG CACAACATAC CCATCCTACA AATTCATTAG 127248 ||||||| | | | | || | |||| ||| || ||||| ||| |||| | |||||||| | AAACACAATA TACCT-TTAA ATTCTACCAG CAT-TCATAC CCAACCTA-A AATTCATT-G 207 GGAGCTAAGG ACAAGGACAT ACGAAGGGGA ACAACCTTAG TTTCAAGAGT TTAAGAAACG 127188 ||||||| | |||||||||| || || |||| |||||||||| ||| || | | | GGAGCTAGTG ACAAGGACAT ACAAAAGGGA ACAACCTTAG TTTTCGGAAT GAATATCTTG 267 T-CCGAAAGA AAGTACTCTT GGAGAAAGAA TTCCAT-GAG A-GAAA-CTC ATACCTTAAT 127132 || |||| || ||||| || ||||| | | ||| | |||| ||| |||||||||| AACCTTAAGA -GGT-CTCTT GG-GAAAGGG ACCGAGAGAG AAGAAAACTC ATACCTTAAT 324 CGATGTTCAA ACTTTAATGT TGCTGCCCGG AAAACTCCTC CAAACCACTC CCAATTCACT 127072 |||||||||| |||||||||| || | ||||| |||||||||| |||| ||||| |||||||||| CGATGTTCAA ACTTTAATGT TGTTACCCGG AAAACTCCTC CAAAGCACTC CCAATTCACT 384 TCAAAGTATA CCTCTCTCGA CGAACCTCTC TTAGCCTTGA CGTTTTGATT ACTTTTTCTT 127012 |||| ||| | |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| TCAACGTACA CCTCTCTCGA CAAACCTCTC TTAGCCTTGA CGTTTTGATT ACTTTTTCTT 444 TTGCTTAAAA AAATTTTTTG TGAGTTCTTC AAGCATGAAA ATTATTGATA TTTTGGCAGA 126952 |||||| ||| ||| |||||| | |||||||| |||||||||| | | ||||| ||||| |||| TTGCTT-AAA AAA-TTTTTG TTAGTTCTTC AAGCATGAAA ACTGTTGATG TTTTGTCAGA 502 AATAATGTGA GGAAGATGGA GAACGTGAGA GAGGGAGTTT AGAAGCGTGA GAGAGAGAGA 126892 |||||||||| |||||||||| | |||||||| ||||||||| |||||||| |||||||||| AATAATGTGA GGAAGATGGA GGACGTGAGA GAGGGAGTTA AGAAGCGT-- GAGAGAGAGA 560 GGGCTAATTG GATTAGGAGA CTAATTCAAG AATTAGTCAA ATAACA-TTA AAATAAATAA 126833 || ||| ||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGACTATTTG GATTAGGAGA CTAATTCAAG AATTAGTCAA ATAACATTTA AAATAAATAA 620 ATACAAATC- --TGT-TTTA --T--TTATT TATTTATTTA TTCATTTAAA ACGTGAAAGG 126781 ||||||||| | | |||| | ||||| |||||||||| |||||||||| |||||||||| ATACAAATCT ATTTTATTTA TTTACTTATT TATTTATTTA TTCATTTAAA ACGTGAAAGG 680 ACAATTATGC CCTTAAATAC CTATTTATTC TTATTTACAT AATTCTCTTC TCTTTTTTTT 126721 |||||||||| |||||||||| |||||||||| |||||| || | || ||| | |||||||| ACAATTATGC CCTTAAATAC CTATTTATTC TTATTT--AT -A-TC-ATTC T-TTTTTTTT 734 CGAATCGTTA CA 126709 ||||||||| || -GAATCGTTA CA 745 hqPGS_C01HBa0163B20.1-_SGN-U337341- (127307 126709) ******************************************************************************** EST sequence 47 +strand 836 n (File: SGN-U337339+) 1 TAGGGGGTAA TCCNTTAAGG CGATTGGGTA CCGGGCCCCC CTCGAGTTTT TTTTTTTTTT 61 TTTTTTGGAT TAGTAGACTA GCCCCAGAAT TAGCCAGATA ACCTTAAAAA CTATTTATAC 121 TAATCTGTTT TATTGATTTA TTTAATTATT CATTGTAAAC GTGAAAGGAC AATGTGGCCC 181 TTAAATACCT ATTTATTCTT ATTTACATAA TTCTCTTCTT TTTTTTTGAA TCGTTACTAA 241 TTAACCTATG TAAAGTAAGA ATGACGTAAG TAGGCTTGTT TGCGACTTCT GATAGGTCAA 301 CGACGCCGGT CTCATATGGG GTCTGAATTC CAGGATCAGA AATAATGCAT AGAGAAACGA 361 CCACTTCCTT CCTTATGAGA CGTCCAGATT AGACCAAGTT TTTTTTCCCC TTCATTCATC 421 AGTGAAACCG TGAAACCGTA AGGAAATGTA GCAAGACCAT TAAGTGTTGT CTAATTTTAG 481 AATCACCTCT ATACATAAAT TATAATCCGA TTCTCACCGG TGAGTAAACA ATCAAAATGG 541 AGTGAGTTTG ACTACTCTTT ATTTCCATCA AGTCTAGTGA ATGGATATTA GACTCCGGGA 601 GCTTTCGAAC ACTTATCTTC TTATCCCGAG CTTTTCCTTA CGTTACTCCT TTTTCCTGGA 661 TTTCTTCCAG GGCAAAGCTC GCCGGTCTAG GAGGTGGTTG CTATGCCTTT ACCTTCCTCC 721 ACTCATTCTT GCAAATCCGT TATGTGTCCA TTCCCAGCTA AAGAAAAGTC GACCGCCACT 781 CCCCATAGGC ATAGTGGTTC CCTGCAGAAA TTTATCTTCT CCCCGATTAT ATTAGC Predicted gene structure (within gDNA segment 128952 to 119950): Exon 1 126884 126710 ( 175 n); cDNA 65 237 ( 173 n); score: 0.869 MATCH C01HBa0163B20.1- SGN-U337339+ 0.869 175 0.209 C PGS_C01HBa0163B20.1-_SGN-U337339+ (126884 126710) Alignment (genomic DNA sequence = upper lines): TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 126825 ||||||||| |||||| | |||||||| || ||||| | ||||| || |||| ||| TTGGATTAGT AGACTAGCCC CAGAATTAGC CAGATAACCT TAAAAACTAT TTATACTAAT 124 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 126765 |||||||||| ||||||||| ||||||||| |||||||| ||||||||| |||||||| CTGTTTTATT GATTTATTTA ATTATTCATT GTAAACGTGA AAGGACAATG TGGCCCTTAA 184 ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTCTTTT TTTTCGAATC GTTAC 126710 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||| ATACCTATTT ATTCTTATTT ACATAATTCT CTTCT-TTTT TTTT-GAATC GTTAC 237 hqPGS_C01HBa0163B20.1-_SGN-U337339+ (126884 126710) ******************************************************************************** EST sequence 18 -strand 1191 n (File: SGN-U317281-) 1 TTTTTTTTTT TTTTTTTTCA ACATCATAAA ACGTATAGTA TCATAAAAAT TGAGAATGAT 61 TTAGTGTTTT GGTTTACACA CACACTACAA TAGCAAAACA AAACAGTTCA ATTTGCTTCG 121 ATTAAGTTGA AGGTACACTG CATGGTAAGC ATGGATGGAC ATTATAATAT TTGCCAACTC 181 TAGGAGCATT TTTCAAAGAC ATGTTTCACT TCATGTATTT ATGAAGAAAC TTTCTGTGAA 241 AGTCATTCCG GATAGTGTCA TTGATGAAGC GCTTAGCTGC CTTCATTTCA CCTCGAGCTT 301 GGTTCTTGAA AACTACATCA TCATCCCACC TTCGCTTCAC ACTGAAAGTT GTTGGCTGGT 361 TGTTGTTTAA CAGAGGGTTT CCTCTCAATA ATTCCGCCTC CTTTGCTTTA AGCTCTTCCT 421 CTTGCTCTAG CCTTTCTTTC CGAAGTTTTT CCTCTGCTTT TTCTTTCTTT ATCTGTTCAA 481 GCTCTGCCAA GAGAGCTTCT GTATCATCTT CATCATCGTC ATCATCATCG TCGTCATCAC 541 TCTCATCACC ACTCTTAACA TCCACATCGG CATCATCAGC ATCAGCACTC CGCGGAACAA 601 TACGATCTTC AATCTCTCGT TTAGCCCCTT CCACAAAGAG TTGACTACCT TTTCGACGAT 661 CTCTGTCATC ATTATAACTC TTGTCTTTAG AGAAATGCCT CCGCTCACGG TCCTCCAACT 721 CATCCCGGAG GTTCCTCTTC TGCAACTCAT CCTGGGTGTC TTGTCCTTCC TTTCTGGGCT 781 TTAATGTTGT GTGAGCTGCA ATGTCTCTTG AAGAGTATTT TTGAGATGGA CCAAATATCC 841 GGGTTCCACC TTGTTCATTG CCACCTTTAG CAGGTGCCCA CGTAGGTCTA GCTGCCGTTG 901 TCATATCTTC TGGGTCTCAA GACAAAATCT AATCTCAGAC GCAGAGCGAT GGGAGAATCG 961 GAAAAATTGA AACTTCGACC CGAAAAAGTG AAAGAGCAAT CTTGAATCAC TTGGATATCA 1021 TTTATATTTT TCATTGATTT TATTTCTAAA TATTCATAAC ATTAGATCTT TAAATTAAAT 1081 CTCAACATTT TCATGAAATA ATTAATTATC TATTTTAATT AAAATTCTAA ATTAAATCTC 1141 AATATTTTCA TCAAGGAAAT AGTTTCTATT TCAATTAGAA TTCGGCCGAT T Predicted gene structure (within gDNA segment 134102 to 126768): Exon 1 129730 129701 ( 30 n); cDNA 965 995 ( 31 n); score: 0.683 Intron 1 129700 128111 (1590 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 128110 127922 ( 189 n); cDNA 996 1183 ( 188 n); score: 0.833 PPA cDNA 18 1 MATCH C01HBa0163B20.1- SGN-U317281- 0.833 219 0.184 C PGS_C01HBa0163B20.1-_SGN-U317281- (129730 129701,128110 127922) Alignment (genomic DNA sequence = upper lines): AATACAAAGT TTGAACCAAA ACAG-GAAAG AAACGCTAGT GGAACATGCT CCGCTAGCTC 129672 ||| ||| | | || || || | || ||||| | AATTGAAACT TCGACCCGAA AAAGTGAAAG A......... .......... .......... 995 AACTCTAAAA CTACGCTAGA ATGTAAAACA GTAGCATCCT CGAAAGCATG AGGACCTACC 129612 .......... .......... .......... .......... .......... .......... 995 AAACTCCGGA TGAATACTGA TGTCCGGATA GCTGCAACAA CGAACCTGTA GCTCTAGCGT 129552 .......... .......... .......... .......... .......... .......... 995 CCACCTGTGC CTGCACCTAA AAGTAGATGT TCGTATGGAA TTAGTACACA CTTGTACTAA 129492 .......... .......... .......... .......... .......... .......... 995 GTATGAGTAT ATGCAAGTAC ACACCAGGGA CATGCATGAG GAAGAATAGC TCTTTCCTAA 129432 .......... .......... .......... .......... .......... .......... 995 CAACATGATT TTTGGAAGTC AAGTCAGTGG ACTTGCCAAA TTAAGATTGG GAAAGTTATG 129372 .......... .......... .......... .......... .......... .......... 995 CCATGAGAGT GACATGCATC ATTATAATTA TCGTATAGCA CACAAAACAT AACATATTCA 129312 .......... .......... .......... .......... .......... .......... 995 TATAACACAT AACATATAAC ACATACTTTC TTTCATATTA TTCATTCGTA TACCATGAGA 129252 .......... .......... .......... .......... .......... .......... 995 CCTTATTATC ATAGACTTAA CTTTAAGACT TTCCAAAATG AGGGCTCAAC ATATGGGACC 129192 .......... .......... .......... .......... .......... .......... 995 TCAACTAGGG AGCCTTCTTT AGCAAACACA GAGTCTGCTT CACTCATTCA TTCGTATTTC 129132 .......... .......... .......... .......... .......... .......... 995 ATTTCAATTC ATTCATAGGC CAGTGCGAAC ACCAGCTATA CCTAGGATGT AGTTTAAGAC 129072 .......... .......... .......... .......... .......... .......... 995 TCTCATCGGG TTTGCTGTGC AATGATCAGG AATGACCTAA TGTCATTACC TGAATCTAGC 129012 .......... .......... .......... .......... .......... .......... 995 TCACCTCTTG ATTATCCTAT CCTAACACCT TCGGTATCAT TTATTTCTTT ATATGATTCA 128952 .......... .......... .......... .......... .......... .......... 995 TTTGAGGCTG GCCTCATTCA TTCATTGGGA ACTTTAACTT TAACCGACAT AGATCATGTG 128892 .......... .......... .......... .......... .......... .......... 995 AGCATCATGA AATCCAGTGT CTTCCCCACA CCGAAAAGAG GTGGAATCAC CGGCCAAAGC 128832 .......... .......... .......... .......... .......... .......... 995 GATTCAATAA CATGCTAGCG TATATGGGAA TTTAACCCCG CCAGATCCCT ATAGTGGCAA 128772 .......... .......... .......... .......... .......... .......... 995 TATAGGTTCA AAGACTAGGA GATGTATGGA GACCCATACC CGGCAAGCCG GACAGTCTCA 128712 .......... .......... .......... .......... .......... .......... 995 TCTCATGAGA ATTACGTGAA CCTCCGCCCT TCCCGAAAGA AGGCATCACC ACTCATAGCT 128652 .......... .......... .......... .......... .......... .......... 995 AGCCTATCGG TGCTCGGTAT AAAGTTCCAT TACATGCAAC TCATACATCA TAGAAGTTTG 128592 .......... .......... .......... .......... .......... .......... 995 CTTCTAGTAT GAAGACTTCA TAGCTCAATA GATGATTTCT CATCTCATCA TTAGTATTAA 128532 .......... .......... .......... .......... .......... .......... 995 GTGTTTTAAA CTCAATATTT TTATTAGAGT ATTCATAGAG ACTGGTCTCT TCATTATCTT 128472 .......... .......... .......... .......... .......... .......... 995 ACACTCTCAT TGGTGAGTAT GTATCGGTAA CATTTACTTA AGCTCATTTA AGATTGCTCT 128412 .......... .......... .......... .......... .......... .......... 995 CATCATATGC ATTAACCTCA CATCATGATT GTCACCACAT TCTTCATTTC ATTACGTATA 128352 .......... .......... .......... .......... .......... .......... 995 TCTTAGGTTC ACTTATTTTT GAACGTATGT TAGACTTATA TATCTATACA TACAAGCCAT 128292 .......... .......... .......... .......... .......... .......... 995 GAGGCTTCAT TTATAGTTCG TTAAGTGAAT TCTTGTTTTT CTAAGATTAT GTATTACAAG 128232 .......... .......... .......... .......... .......... .......... 995 ACTTATGTAT CTTGTATATA TGCCAAGATC TTTGATTTTT GATCTAAGTA GATGACATTA 128172 .......... .......... .......... .......... .......... .......... 995 TTCTTGAATA TTTCACTCAC GTATGACTTA TGTATCAATA CGGAGGTTTG GACACGAGAA 128112 .......... .......... .......... .......... .......... .......... 995 CCCAAATTTT GAATTATTTG GATATCATTT ATATTTTTCA TTGATTTTTG TTCT-AATAT 128053 | ||| || |||| | ||| |||||||||| |||||||||| |||||||| |||| ||||| .GC-AATCTT GAATCACTTG GATATCATTT ATATTTTTCA TTGATTTTAT TTCTAAATAT 1053 TCATAAATTT AGAACTCTAA GTTAAGTCTC AACATTTTCG TGAAATAATA AATTTTTTTT 127993 |||||| || ||| || ||| |||| |||| ||||||||| ||||||||| |||| | | | TCATAACATT AGATCTTTAA ATTAAATCTC AACATTTTCA TGAAATAATT AATTATCTAT 1113 TTTAATTAGA ATTCTAAATT AAATTTCAAT CATTTACATG AAAGAATAAT TTTCTAATTT 127933 |||||||| | |||||||||| |||| ||||| |||| ||| || ||| | |||||| || TTTAATTAAA ATTCTAAATT AAATCTCAAT -ATTTTCATC AAGGAAATAG TTTCTATTTC 1172 AATTAGAATT C 127922 |||||||||| | AATTAGAATT C 1183 hqPGS_C01HBa0163B20.1-_SGN-U317281- (128110 127922) ******************************************************************************** EST sequence 22 +strand 833 n (File: SGN-U329056+) 1 ACATAATGAA ATGAATGATA TCAAAGTTGT TTGGATAGGA TAATCACAAG GTGAGTTAGA 61 TTCAAGTAAT GACATTAGGT CATTCTTAGT CATTGCACAA TGAACCTAAT GAAAGTCTCA 121 AACTACATCC TAGGTATAGT TTGTGTTTAC ACTGGCCTAT GAATGAAATG AAATGTAGTA 181 CGTATGAATG AAAGAAGCAG GCTATGTGTT TGCTAATGAA GACTCCCTAG TTGAGGTCCC 241 ATTTGTTGAG CCCTCATTTC TGGGAATTCT TAATGTTAAG TCCATGATTC AAAGGTCTCA 301 TGGCATATGA TAAATGATAT TAAAGAAGTG ATGTGCTACA TGCAAATTGT ATTTTATGCC 361 ATATCATATG TGCTATGTGT AAATGTTATG TGCTATGTGG AAATGTTAAA AACTGATGAT 421 GTACGTTATT CTCATGGCAT AACTTTCCTA TTCTAAATCT AGAAAGCTCA CTGACTTTCC 481 TAATCCATAT TTGGAAACCT TCGTAATCAC AAATTGGCAG GTCCACTAAC TTGACTTCCA 541 AAAACCATGT TGTTAGGAAA GAATTATTCT TTCTTATGCA TGTCATTGGT GTGTGCTTGC 601 ATATACCCAT ACTTAGTACA AGTGTGTACT AACCCTATAC AAACTCTACT ATTTTAGGTG 661 CAACCACAAC TGGACGAATG AACTAAAGGA TCTTCGCTGC AGTTATTCGG ACGTTTAGCA 721 TTCAACCGGC TTTGGTAGGT CCTCATGATT TCGAGGATGC TGTTGTTTTA TATTCTAGCT 781 TAGTTTTAGA GTTGATGTAG TGGATCATGT TCCACTAGTG TTTCCTTCCT ATT Predicted gene structure (within gDNA segment 127287 to 132761): Exon 1 128960 129352 ( 393 n); cDNA 3 390 ( 388 n); score: 0.805 Intron 1 129353 129782 ( 430 n); Pd: 0.000 (s: 0.62), Pa: 0.509 (s: 0) Exon 2 129783 129821 ( 39 n); cDNA 391 425 ( 35 n); score: 0.692 MATCH C01HBa0163B20.1+ SGN-U329056+ 0.805 432 0.519 C PGS_C01HBa0163B20.1+_SGN-U329056+ (128960 129352,129783 129821) Alignment (genomic DNA sequence = upper lines): ATAAAGAAAT AAATGATACC GAAGGTGTTA GGATAGGATA ATCAAGAGGT GAGCTAGATT 129019 |||| ||||| ||||||| | ||| |||| |||||||||| |||| |||| ||| |||||| ATAATGAAAT GAATGATATC AAAGTTGTTT GGATAGGATA ATCACAAGGT GAGTTAGATT 62 CAGGTAATGA CATTAGGTCA TTCCTGATCA TTGCACAGCA AACCCGATGA GAGTCTTAAA 129079 || ||||||| |||||||||| ||| | ||| ||||||| |||| |||| ||||| ||| CAAGTAATGA CATTAGGTCA TTCTTAGTCA TTGCACAATG AACCTAATGA AAGTCTCAAA 122 CTACATCCTA GGTATAGCTG GTGTTCGCAC TGGCCTATGA ATGAATTGAA ATGAAATACG 129139 |||||||||| ||||||| | ||||| ||| |||||||||| ||||| |||| ||| | |||| CTACATCCTA GGTATAGTTT GTGTTTACAC TGGCCTATGA ATGAAATGAA ATGTAGTACG 182 AATGAATGAG TGAAGCAGAC TCTGTGTTTG CTAAAGAAGG CTCCCTAGTT GAGGTCCCAT 129199 |||||||| ||||||| | | |||||||| |||| |||| |||||||||| |||||||||| TATGAATGAA AGAAGCAGGC TATGTGTTTG CTAATGAAGA CTCCCTAGTT GAGGTCCCAT 242 ATGTTGAGCC CTCATTT-TG GAAAGTCTTA AAGTTAAGTC TATGATAATA AGGTCTCATG 129258 ||||||||| ||||||| || | || ||||| | |||||||| ||||| | |||||||||| TTGTTGAGCC CTCATTTCTG GGAATTCTTA ATGTTAAGTC CATGATTCAA AGGTCTCATG 302 GTATACGAAT GAATAATATG AAAGAAAGTA TGTGTTATAT GTTATGTGTT ATATGAATAT 129318 | ||| | || ||| |||| |||||| | |||| || || | | || | || | ||| GCATATG-AT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTG-T AT-T--TTAT 357 GTTATGTTTT GTGTGCTATA CGATAATTAT AATGATGCAT GTCACTCTCA TGGCATAACT 129378 | || | | |||||||| | ||| | | ||| GCCATATCAT ATGTGCTATG TG-TAAATGT TATG...... .......... .......... 390 TTCCCAATCT TAATTTGGCA AGTCCACTGA CTTGACTTCC AAAAATCATG TTGTTAGGAA 129438 .......... .......... .......... .......... .......... .......... 390 AGAGCTATTC TTCCTCATGC ATGTCCCTGG TGTGTACTTG CATATACTCA TACTTAGTAC 129498 .......... .......... .......... .......... .......... .......... 390 AAGTGTGTAC TAATTCCATA CGAACATCTA CTTTTAGGTG CAGGCACAGG TGGACGCTAG 129558 .......... .......... .......... .......... .......... .......... 390 AGCTACAGGT TCGTTGTTGC AGCTATCCGG ACATCAGTAT TCATCCGGAG TTTGGTAGGT 129618 .......... .......... .......... .......... .......... .......... 390 CCTCATGCTT TCGAGGATGC TACTGTTTTA CATTCTAGCG TAGTTTTAGA GTTGAGCTAG 129678 .......... .......... .......... .......... .......... .......... 390 CGGAGCATGT TCCACTAGCG TTTCTTTCCT GTTTTGGTTC AAACTTTGTA TTGGTGCTAT 129738 .......... .......... .......... .......... .......... .......... 390 TTTGGCCGAT ATACAATTAA TACTTAATGA ATTATTTCTT TCAGTTGCTT ATCTCTTAAA 129798 ||| | || | ||| .......... .......... .......... .......... ....-TGC-T ATGT-GGAAA 403 TGTTAGATGG TTGATGATGA ACG 129821 ||||| | |||||||| ||| TGTTA-AAAA CTGATGATGT ACG 425 hqPGS_C01HBa0163B20.1+_SGN-U329056+ (128960 129352) ******************************************************************************** EST sequence 20 +strand 392 n (File: SGN-U327982+) 1 GGCACGAGGA ATCGTGATCA AGTTATAGAG GGGATGGATT TAGTTGTGAT GAACCAGGGC 61 GTAGACGGAA GGATATTTGG TATTTGGTAA AGAAAACTCG GGTTCAAGGG AAGATAGGTG 121 CAAGCACAGG TGGACGCTAG AGCTACAGGT TCGTTGTTGC AGCTATCCGG ACATCAGTAT 181 TCATCCGGAG TTTGGTAGGT CCTCATGCTT TCGAGGATGC TACCGTTTTA CATTCTAGCG 241 TAGTTTTAGA GTTGAGCTAG CGGAGCATGT TCCACTAGCG TTTCTTTCCT GTTTTGGTTC 301 AAACTTTGTA TTGGCGCTAT TTTGGCCGAT ATACAAGTAA TACTTAATGA ATTATTTCTT 361 TCAGTTGCTT AAAAAAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 127712 to 130609): Exon 1 129536 129788 ( 253 n); cDNA 118 370 ( 253 n); score: 0.984 PPA cDNA 371 392 MATCH C01HBa0163B20.1+ SGN-U327982+ 0.984 253 0.645 C PGS_C01HBa0163B20.1+_SGN-U327982+ (129536 129788) Alignment (genomic DNA sequence = upper lines): GTGCAGGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 129595 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAAGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 177 TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACTGTT TTACATTCTA 129655 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACCGTT TTACATTCTA 237 GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 129715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 297 TTCAAACTTT GTATTGGTGC TATTTTGGCC GATATACAAT TAATACTTAA TGAATTATTT 129775 |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| |||||||||| TTCAAACTTT GTATTGGCGC TATTTTGGCC GATATACAAG TAATACTTAA TGAATTATTT 357 CTTTCAGTTG CTT 129788 |||||||||| ||| CTTTCAGTTG CTT 370 hqPGS_C01HBa0163B20.1+_SGN-U327982+ (129536 129788) ******************************************************************************** EST sequence 53 -strand 1506 n (File: SGN-U329893-) 1 CGGGCCCCCC TCGAGTTTTT TTTTTTTTTT TTTTATCTCT TAAATGTTAG ATGGTTGATG 61 ATGAACGATT ATGAAATGTT AAGAATATTC AGCAAGTATG ATTAAAGAAT CAAAAAAAAA 121 AATTCAAATT TTTCGCTAAA ATTTATCTAT GTAAAGTAAG AATGACGTAA GTAGGCTTGT 181 CTGCGACCTC TGAGAGGTCA ACGACGCCGG TCTCGTCTGG GGTCTAGATT CCGGTCGTGA 241 CAGAGGTAAC ACCAAACCAT CCGGGGGGAC ATACGAGGGT GTTCTTAATT AATAACTCCA 301 ACGAATCTGG AGTTAGCACA ACCGTTTCCG CCACACGACT GCCATTGTTG TAAAGCTTAA 361 TCCTAGGTGC TACTTTAATT TTCTCTGCTG TAGCGATCGC TGGACTCTGT TTCACGTCCA 421 CCTCGAGAAA AGTTACTGAA GGATATTCGG CGTTCAAGGT ATCCATGATA TAGGACATCC 481 ACGTGCTTTC TGGGTTGGAT AATTCATCAA AATAGACCAC AGATTGACCA GATGCAATCG 541 CAGCCCGGAA CTTGTCAAGA TCTGAAATCA ACTCCACCAT GAAATTACCT TTTCTGCGTG 601 ACTTCCTTAA TTCAGCTCGG GCATGGGATA AATTTTCAGC AACCACTTTG TTACTTGGAA 661 GTTGCTGCCG CAGAAACTCA TAATCGCTCA CAGCATCAGC CCATCTTTCC AGCTTGATAC 721 TTGAGGCAGC TTTTCGATAA AGAGCTTTAG TATATTGTGG CCGGATAAGG AGAGCGCGAA 781 TGCTATCAGC CCGAGATTCT TCCCACTCTC CAAGCTTAAA CCAGCAATTT GCTCTATTGT 841 GGTAGAGAAC TGAATCTGAA GAATCAAGAA AGAGCCCTTC CCCATAAACA CTACAAGCTT 901 GTCTATATCT TTTAGAATTG AAATGCTCGT TGCCATGAGT ACGAGCTTTA TCCACCAGCC 961 TCATGTTTTT GAGTTTACCA GTAACTTCAG CACTTTGAAT ATCAATTTGT GCAGCTCTTT 1021 CAATGGCAAT AAACGCATCA TCAAACTTTC CAAGACTGCT GTCAATCTGA GCTTGGACAA 1081 ATAATATGTA TGCTTCAGAG AGCATTCCAA AAATTTTTGA CCGGCATTCT GTGGCAGATA 1141 GCTCATACGT CCTAGCTTTA CGAATCCACA ATTCAGCATC CTTTAATTGG TACAGCTTCA 1201 AATGAGCTTC CGCTCGACAT GCGAATAGCT TAGGAGATGC ATCAGCTTCA CAAGTAGTTG 1261 CTTTCGCAGC TTTTCTCATG GTCATCCAAT TTTTAGATCT CCGGGCGTCA GCGCATTTGC 1321 TCATGTGTTC CTCCACTGCC TGCAACTTGG CTTCATCTGG TTTCTCACCC TTCCTTGCAT 1381 TTTCAACCTG TCCTAAACCC TTGATCTCAT TCGCTTGTGT ATTCAACTCC TCCGCATTGG 1441 TTCTCTGCAT CTCACCAAAA GGCATTATGC TTCCATAGCC GTAAATCTCG GCTATCATCT 1501 CAATGT Predicted gene structure (within gDNA segment 128857 to 134102): Exon 1 129783 130003 ( 221 n); cDNA 29 254 ( 226 n); score: 0.880 PPA cDNA 28 15 MATCH C01HBa0163B20.1+ SGN-U329893- 0.880 221 0.147 C PGS_C01HBa0163B20.1+_SGN-U329893- (129783 130003) Alignment (genomic DNA sequence = upper lines): TTGCTTATCT CTTAAATGTT AGATGGTTGA TGATGAACGA TTACGAAATG TTAAGAATGT 129842 || |||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | TTTTTTATCT CTTAAATGTT AGATGGTTGA TGATGAACGA TTATGAAATG TTAAGAATAT 88 TCAGCAAGTA TGATTAAAGA ATC---AAAA AC--TTCAAA TTTTCCGCTA AAATTAATCT 129897 |||||||||| |||||||||| ||| |||| | |||||| |||| ||||| ||||| |||| TCAGCAAGTA TGATTAAAGA ATCAAAAAAA AAAATTCAAA TTTTTCGCTA AAATTTATCT 148 ATGTAAAGTA AGAATGACGT AAGCAGGCTT GTCTGCGACC TCTGAGAGGT CAACGACGCC 129957 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ATGTAAAGTA AGAATGACGT AAGTAGGCTT GTCTGCGACC TCTGAGAGGT CAACGACGCC 208 GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAAAGTTG GTATCA 130003 |||||||||| |||||||||| |||||||||| |||| || | | || GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAGAGGTA ACACCA 254 hqPGS_C01HBa0163B20.1+_SGN-U329893- (129783 130003) ******************************************************************************** EST sequence 56 -strand 973 n (File: SGN-U321279-) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGAGCTTCA GAACATTTAT CTTCTAATCC TGAGCTTTTC ACTTACCTTA CTCCTTTTTC 601 ATGATTCTTC GAAGGTAAAA GCTACTCATA TAGGAAGTGT TGCTACTCTT TTCCCTAATT 661 TGATCATTCA TAGAGTTCTT TATGTTCCTT CTTTTAAAAT GAATCTTCCA TCTATTCACA 721 CTGGTATGCA ATTAGAGTAT TTTATCATTT CTCCCTTCTA ACAGGAAGAA AAATAAAAAG 781 GCATGACGAA ATTTGCAACA TTCCAGAAAA ATACAATTCA CTGAACTACC AAATCCTGAT 841 TAACTAGTAA GTAAATAGAA GCTATCTCCT AAAAAGGGTC ATGTTGATGT AATAGAGAAA 901 TACTGCTCTA TCAAAACTTC CTCAGCCTGT ACTTGTTCAA AACTTGTTTC TAGACCTCCA 961 CTGGCAAACC TGA Predicted gene structure (within gDNA segment 127386 to 134102): Exon 1 129888 129993 ( 106 n); cDNA 183 287 ( 105 n); score: 0.868 Intron 1 129994 130065 ( 72 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.62) Exon 2 130066 130112 ( 47 n); cDNA 288 334 ( 47 n); score: 0.617 PPA cDNA 11 1 MATCH C01HBa0163B20.1+ SGN-U321279- 0.868 153 0.157 C PGS_C01HBa0163B20.1+_SGN-U321279- (129888 129993,130066 130112) Alignment (genomic DNA sequence = upper lines): AAATTAATCT ATGTAAAGTA AGAATGACGT AAGCAGGCTT GTCTGCGACC TCTGAGAGGT 129947 ||||||| || |||||||||| |||||||||| ||| |||||| || |||||| |||||||||| AAATTAACCT ATGTAAAGTA AGAATGACGT AAGTAGGCTT GTTTGCGACT TCTGAGAGGT 242 CAACGACGCC GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAAAGTTG GTATCAGAGC 130007 |||||||||| |||||| | | ||||||| | |||| | | | ||| CAACGACGCC GGTCTCATAT GGGGTCTGAA TTCCAG-GAT CAGAAA.... .......... 287 GCTAGGTTAA ATTCCTCGAA TAATGAGTTC ACATCAACCA CATTGAGTAG TTTCTAAGTC 130067 | .......... .......... .......... .......... .......... ........TA 289 ATG-GTAGTG AAGTGCACCA CTATCCTGGA TTA-GAGACT GCATGAT 130112 ||| ||| | || | |||| || |||| ||| ||||| || ||| ATGCATAGAG AAACG-ACCA CT-TCCTTCC TTATGAGACG TCAAGAT 334 hqPGS_C01HBa0163B20.1+_SGN-U321279- (129888 129993) Total number of EST alignments reported: 53 ________________________________________________________________________________ Predicted gene locations (17) in segment 1 to 134102: PGL 1 (- strand): 4273 4063 AGS-1 (4273 4063) SCR (e 0.893) Exon 1 4273 4063 ( 211 n); score: 0.893 PGS (4273 4063) SGN-U345415+ 3-phase translation of AGS-1 (-strand): . . . . . . 4273 CACGCCTTGTGGCACAAGAATTTTCTCAAAGGCCTGGCGTCGACTATGAAGAGACATACT H A L W H K N F L K G L A S T M K R H T T P C G T R I F S K A W R R L - R D I L R L V A Q E F S Q R P G V D Y E E T Y . . . . . . 4213 CACCCGTTTTGGATGCAATAATATTGCATTATCTCATTAGTTTCACAGTCCATGAGCAAC H P F W M Q - Y C I I S L V S Q S M S N T R F G C N N I A L S H - F H S P - A T S P V L D A I I L H Y L I S F T V H E Q . . . . . . 4153 TTGAAATGCATTTGATGGATGTGGTTATAGCCTACCTTTATGGATCACTTGATAATGAGA L K C I - W M W L - P T F M D H L I M R - N A F D G C G Y S L P L W I T - - - D L E M H L M D V V I A Y L Y G S L D N E . . . . 4093 TATACATGAAAATTCTTGAAGGATTTGCGAT Y T - K F L K D L R I H E N S - R I C D I Y M K I L E G F A Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-1_AGS-1_PPS_1 (4271 4065) (frame '0'; 207 bp, 69 residues) 1 RLVAQEFSQR PGVDYEETYS PVLDAIILHY LISFTVHEQL EMHLMDVVIA YLYGSLDNEI 61 YMKILEGFA 3-phase translation of AGS-1 (+strand): . . . . . . 4063 ATCGCAAATCCTTCAAGAATTTTCATGTATATCTCATTATCAAGTGATCCATAAAGGTAG I A N P S R I F M Y I S L S S D P - R - S Q I L Q E F S C I S H Y Q V I H K G R R K S F K N F H V Y L I I K - S I K V . . . . . . 4123 GCTATAACCACATCCATCAAATGCATTTCAAGTTGCTCATGGACTGTGAAACTAATGAGA A I T T S I K C I S S C S W T V K L M R L - P H P S N A F Q V A H G L - N - - D G Y N H I H Q M H F K L L M D C E T N E . . . . . . 4183 TAATGCAATATTATTGCATCCAAAACGGGTGAGTATGTCTCTTCATAGTCGACGCCAGGC - C N I I A S K T G E Y V S S - S T P G N A I L L H P K R V S M S L H S R R Q A I M Q Y Y C I Q N G - V C L F I V D A R . . . . 4243 CTTTGAGAAAATTCTTGTGCCACAAGGCGTG L - E N S C A T R R F E K I L V P Q G V P L R K F L C H K A Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (- strand): 14464 6999 AGS-1 (11990 11677,7032 6999) SCR (e 0.773 d 0.000 a 0.000,e 0.735) Exon 1 11990 11677 ( 314 n); score: 0.773 Intron 1 11676 7033 (4644 n); Pd: 0.000 Pa: 0.000 Exon 2 7032 6999 ( 34 n); score: 0.735 PGS (11938 11677,7032 6999) SGN-U339741- PGS (11990 11878) SGN-U325666+ 3-phase translation of AGS-1 (-strand): . . . . . . 11990 TTTAATAAATATTACTTACTTGGCTAAATATTAAAGGAAATTAAAATTAGATTATGTATT F N K Y Y L L G - I L K E I K I R L C I L I N I T Y L A K Y - R K L K L D Y V F - - I L L T W L N I K G N - N - I M Y . . . . . . 11930 TTAATTGTCTAAATCAATGTAAAATCAAAGAAGAAATATTTAATATTATTGTCTGTTGTG L I V - I N V K S K K K Y L I L L S V V - L S K S M - N Q R R N I - Y Y C L L C F N C L N Q C K I K E E I F N I I V C C . . . . . . 11870 CGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGACAACAGATTTACGTG R N L R - Y E K I - T R K T R Q Q I Y V G I - D N T R K Y K R E K Q D N R F T W A E F E I I R E N I N A K N K T T D L R . . . . . . 11810 GTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAGCAGTTTTATTATGGAGAGG V H Q - I G Y V H G K R G S S F I M E R F T N K L A T S T G R E G A V L L W R G G S P I N W L R P R E E R E Q F Y Y G E . . . . . . 11750 CAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTGCTAAGCTACGC Q K Q N Y R I G F P I A S I Y S A K L R K N R I T E - G F P - R L Y I V L S Y A A K T E L Q N R V S H S V Y I - C - A T . . : . . . 11690 CCTAACAGGCTTGG : GTCCGATTCAAGGCATTCAACATTGTCATTCTTA P N R L G : S D S R H S T L S F L L T G L : G P I Q G I Q H C H S P - Q A W : V R F K A F N I V I L Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-2_AGS-1_PPS_1 (11940 11704) (frame '0'; 234 bp, 78 residues) 1 IMYFNCLNQC KIKEEIFNII VCCAEFEIIR ENINAKNKTT DLRGSPINWL RPREEREQFY 61 YGEAKTELQN RVSHSVYI- AGS-2 (8304 8276,7412 7206,7030 6999) SCR (e 0.724 d 0.000 a 0.000,e 0.874 d 0.000 a 0.000,e 0.812) Exon 1 8304 8276 ( 29 n); score: 0.724 Intron 1 8275 7413 ( 863 n); Pd: 0.000 Pa: 0.000 Exon 2 7412 7206 ( 207 n); score: 0.874 Intron 2 7205 7031 ( 175 n); Pd: 0.000 Pa: 0.000 Exon 3 7030 6999 ( 32 n); score: 0.812 PGS (8304 8276,7412 7206,7030 6999) SGN-U339740- 3-phase translation of AGS-2 (-strand): . . . : . . . 8304 AATCAAGAATCCACACATCTGAATAATGA : AATTTGTTGTGCGGAATTTGAGATAATACGA N Q E S T H L N N E : I C C A E F E I I R I K N P H I - I M : K F V V R N L R - Y E S R I H T S E - - : N L L C G I - D N T . . . . . . 7381 GAAAATATAAACGCGAAAAACAAGACAACAGATTTACGTGGTTCACCAATAAATTGGCTA E N I N A K N K T T D L R G S P I N W L K I - T R K T R Q Q I Y V V H Q - I G Y R K Y K R E K Q D N R F T W F T N K L A . . . . . . 7321 CGTCCACGGGAAGAGAGGGAACAGTTTTATTATGGAGAGGCAAAAACAGAATTACAGAAT R P R E E R E Q F Y Y G E A K T E L Q N V H G K R G N S F I M E R Q K Q N Y R I T S T G R E G T V L L W R G K N R I T E . . . . . . : 7261 AGGGTTTCCCATAGCGTCTATATATAGTGCTAAGCTACGCCCTAACAGGCTTGGGC : CCGA R V S H S V Y I - C - A T P - Q A W A : R G F P I A S I Y S A K L R P N R L G : P D - G F P - R L Y I V L S Y A L T G L G : P . . . 7026 TTCAAGGCATTCAACATTGTCATTCTTA F K A F N I V I L S R H S T L S F L I Q G I Q H C H S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-2_AGS-2_PPS_1 (8304 8276,7412 7235) (frame '1'; 204 bp, 68 residues) 1 NQESTHLNNE ICCAEFEIIR ENINAKNKTT DLRGSPINWL RPREEREQFY YGEAKTELQN 61 RVSHSVYI- AGS-3 (10217 9569) SCR (e 0.983) Exon 1 10217 9569 ( 649 n); score: 0.983 PGS (10217 9569) SGN-U330105- 3-phase translation of AGS-3 (-strand): . . . . . . 10217 AGTCATGTATATCTCTTCCTCCAACTCTCCATATAGAAACACTGTCTTCACATCAAGTTG S H V Y L F L Q L S I - K H C L H I K L V M Y I S S S N S P Y R N T V F T S S C S C I S L P P T L H I E T L S S H Q V . . . . . . 10157 TTCAAGCTCCAGATTCTGATGTGCAACTATCGCTAGTAACACTCGGATGGAAGTATGTCT F K L Q I L M C N Y R - - H S D G S M S S S S R F - C A T I A S N T R M E V C L V Q A P D S D V Q L S L V T L G W K Y V . . . . . . 10097 GACCACTGGTGAGAAGATCTCATTGTAGTCCACTCCCTCTCTTTGGTTGAAACCTCTGGC D H W - E D L I V V H S L S L V E T S G T T G E K I S L - S T P S L W L K P L A - P L V R R S H C S P L P L F G - N L W . . . . . . 10037 AACAACCCTAGCTTTATACTTGACTCCTTCTGGTGGTGATATCCCTTCCTTCTTCTTGAA N N P S F I L D S F W W - Y P F L L L E T T L A L Y L T P S G G D I P S F F L K Q Q P - L Y T - L L L V V I S L P S S - . . . . . . 9977 AACCCATTTGCAAGTAATAATCTTTCTCCCCGAAGGCTGTATGACCAGATCCCATGTCTG N P F A S N N L S P R R L Y D Q I P C L T H L Q V I I F L P E G C M T R S H V - K P I C K - - S F S P K A V - P D P M S . . . . . . 9917 ATTCTTGTGTAGGGACTCCATCTCATCTCCCATAGCGGCAAACCATTTTTCAGAATCAGA I L V - G L H L I S H S G K P F F R I R F L C R D S I S S P I A A N H F S E S E D S C V G T P S H L P - R Q T I F Q N Q . . . . . . 9857 ACTTAAAATGGCTTCTTTGTAAGTAGACGGCTCAGATGTATCTACCTCTTCAGCAACCTG T - N G F F V S R R L R C I Y L F S N L L K M A S L - V D G S D V S T S S A T C N L K W L L C K - T A Q M Y L P L Q Q P . . . . . . 9797 CAGTGCATAACCCACCATGTCCTCAAAACCATACCTCGTAGGTGGCCGAACTCCAACCCT Q C I T H H V L K T I P R R W P N S N P S A - P T M S S K P Y L V G G R T P T L A V H N P P C P Q N H T S - V A E L Q P . . . . . . 9737 CCTTGGCCGATCTTGAGCTATACTCTGATGGATATCTGATGGCATAGATTCTGGAATATC P W P I L S Y T L M D I - W H R F W N I L G R S - A I L - W I S D G I D S G I S S L A D L E L Y S D G Y L M A - I L E Y . . . . . . 9677 AGTTTCTGTCTGTGGCTCTTGATCCTCCTCTTCAGGTTCCTTTAAATCTCTCTCGTTCTG S F C L W L L I L L F R F L - I S L V L V S V C G S - S S S S G S F K S L S F - Q F L S V A L D P P L Q V P L N L S R S . . . . . 9617 AATGACTTGAAACTCCACCTGTTTGTCAAGACTCCCAGTTTCTGACGTA N D L K L H L F V K T P S F - R M T - N S T C L S R L P V S D V E - L E T P P V C Q D S Q F L T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (+strand): . . . . . . 9569 TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAG Y V R N W E S - Q T G G V S S H S E R E T S E T G S L D K Q V E F Q V I Q N E R R Q K L G V L T N R W S F K S F R T R . . . . . . 9629 AGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGA R F K G T - R G G S R A T D R N - Y S R D L K E P E E E D Q E P Q T E T D I P E E I - R N L K R R I K S H R Q K L I F Q . . . . . . 9689 ATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGT I Y A I R Y P S E Y S S R S A K E G W S S M P S D I H Q S I A Q D R P R R V G V N L C H Q I S I R V - L K I G Q G G L E . . . . . . 9749 TCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGA S A T Y E V W F - G H G G L C T A G C - R P P T R Y G F E D M V G Y A L Q V A E F G H L R G M V L R T W W V M H C R L L . . . . . . 9809 AGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGA R G R Y I - A V Y L Q R S H F K F - F - E V D T S E P S T Y K E A I L S S D S E K R - I H L S R L L T K K P F - V L I L . . . . . . 9869 AAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGA K M V C R Y G R - D G V P T Q E S D M G K W F A A M G D E M E S L H K N Q T W D K N G L P L W E M R W S P Y T R I R H G . . . . . . 9929 TCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAA S G H T A F G E K D Y Y L Q M G F Q E E L V I Q P S G R K I I T C K W V F K K K I W S Y S L R G E R L L L A N G F S R R . . . . . . 9989 GGAAGGGATATCACCACCAGAAGGAGTCAAGTATAAAGCTAGGGTTGTTGCCAGAGGTTT G R D I T T R R S Q V - S - G C C Q R F E G I S P P E G V K Y K A R V V A R G F R K G Y H H Q K E S S I K L G L L P E V . . . . . . 10049 CAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTC Q P K R G S G L Q - D L L T S G Q T Y F N Q R E G V D Y N E I F S P V V R H T S S T K E R E W T T M R S S H Q W S D I L . . . . . . 10109 CATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGT H P S V T S D S C T S E S G A - T T - C I R V L L A I V A H Q N L E L E Q L D V P S E C Y - R - L H I R I W S L N N L M . . . . . 10169 GAAGACAGTGTTTCTATATGGAGAGTTGGAGGAAGAGATATACATGACT E D S V S I W R V G G R D I H D K T V F L Y G E L E E E I Y M T - R Q C F Y M E S W R K R Y T - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-2_AGS-3_PPS_1 (9570 10217) (frame '2'; 648 bp, 216 residues) 1 TSETGSLDKQ VEFQVIQNER DLKEPEEEDQ EPQTETDIPE SMPSDIHQSI AQDRPRRVGV 61 RPPTRYGFED MVGYALQVAE EVDTSEPSTY KEAILSSDSE KWFAAMGDEM ESLHKNQTWD 121 LVIQPSGRKI ITCKWVFKKK EGISPPEGVK YKARVVARGF NQREGVDYNE IFSPVVRHTS 181 IRVLLAIVAH QNLELEQLDV KTVFLYGELE EEIYMT AGS-4 (11089 10222) SCR (e 0.980) Exon 1 11089 10222 ( 868 n); score: 0.980 PGS (11089 10222) SGN-U345812- 3-phase translation of AGS-4 (-strand): . . . . . . 11089 TCTGTCAAGGCCATGTACTCCGCTTCCGTAGTAGACAAAGTCACTGTAGGTTGCAAAGTT S V K A M Y S A S V V D K V T V G C K V L S R P C T P L P - - T K S L - V A K L C Q G H V L R F R S R Q S H C R L Q S . . . . . . 11029 GCCTTCCAACTGACGACAGATCCTCCAAGGGTAAACACATAGCCAGTCATCGATCTTCTT A F Q L T T D P P R V N T - P V I D L L P S N - R Q I L Q G - T H S Q S S I F L C L P T D D R S S K G K H I A S H R S S . . . . . . 10969 GTGTCAACATCTCCAGCATAGTCTGAATCAGAATAGCCAGTAACTAAGCACTGAGTATCA V S T S P A - S E S E - P V T K H - V S C Q H L Q H S L N Q N S Q - L S T E Y H C V N I S S I V - I R I A S N - A L S I . . . . . . 10909 CCTCCATAAATGAGACCAACGTCAGATGTACCTCTAAGGTACCGGAAAATTCTCTTCACA P P - M R P T S D V P L R Y R K I L F T L H K - D Q R Q M Y L - G T G K F S S Q T S I N E T N V R C T S K V P E N S L H . . . . . . 10849 GCCTGCCAATGTTCTCTCCCTGGTTGTCCCATGAATCTGCTCTCTACACTGACTGCATGT A C Q C S L P G C P M N L L S T L T A C P A N V L S L V V P - I C S L H - L H V S L P M F S P W L S H E S A L Y T D C M . . . . . . 10789 GCTAAATCTGGCCTTGTACAGACCATAGCATACATTAAACTTCCTACGGCACTGGCATAG A K S G L V Q T I A Y I K L P T A L A - L N L A L Y R P - H T L N F L R H W H R C - I W P C T D H S I H - T S Y G T G I . . . . . . 10729 GGGACTCGTGACATATACTCCTTCTCTTCTCCTGACTGTGGAGCGAACATGGCAGTGAGA G T R D I Y S F S S P D C G A N M A V R G L V T Y T P S L L L T V E R T W Q - D G D S - H I L L L F S - L W S E H G S E . . . . . . 10669 TGGATATTGGCAGCACTGGGGGTATCAATGGGCTTAGATGAAGACATGCCAAACCTCGCC W I L A A L G V S M G L D E D M P N L A G Y W Q H W G Y Q W A - M K T C Q T S P M D I G S T G G I N G L R - R H A K P R . . . . . . 10609 AAGACCTTCTGAATGTAGCTTCTCTGTGACAAGAAAAGTTTCCTTCTCTCTCTGTCTCTA K T F - M - L L C D K K S F L L S L S L R P S E C S F S V T R K V S F S L C L - Q D L L N V A S L - Q E K F P S L S V S . . . . . . 10549 ATGATCTCCATCCCTAAAATCTTCCGAGCGGCTCCCAGATCCTTCATCTCAAACTCAGCA M I S I P K I F R A A P R S F I S N S A - S P S L K S S E R L P D P S S Q T Q H N D L H P - N L P S G S Q I L H L K L S . . . . . . 10489 CTAAGTAAACCCTTCAGCTTCTGAATGTCATACTTCTTCTTTGCAGCTATTAACATATCA L S K P F S F - M S Y F F F A A I N I S - V N P S A S E C H T S S L Q L L T Y H T K - T L Q L L N V I L L L C S Y - H I . . . . . . 10429 TCTACATAAAGCACCAGATAGATGAATGAATCATCATTGAGCCTATTGTAGTAGACACAA S T - S T R - M N E S S L S L L - - T Q L H K A P D R - M N H H - A Y C S R H N I Y I K H Q I D E - I I I E P I V V D T . . . . . . 10369 CAATCATATGAGCTCCGAGTATAGCCCAACTTCACCATATAGCTGTCAAACCTTTTATAC Q S Y E L R V - P N F T I - L S N L L Y N H M S S E Y S P T S P Y S C Q T F Y T T I I - A P S I A Q L H H I A V K P F I . . . . . . 10309 CACTGCCTTGGAGACTGCTTAAGTCCATATAAGGACTTCTTCAACTTGCAGACGTGATTT H C L G D C L S P Y K D F F N L Q T - F T A L E T A - V H I R T S S T C R R D F P L P W R L L K S I - G L L Q L A D V I . . . 10249 TCCTTCCCTGGAACTTGGAAACCATCCG S F P G T W K P S P S L E L G N H P F L P W N L E T I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-4 (+strand): . . . . . . 10222 CGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTAT R M V S K F Q G R K I T S A S - R S P Y G W F P S S R E G K S R L Q V E E V L I D G F Q V P G K E N H V C K L K K S L . . . . . . 10282 ATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGT M D L S S L Q G S G I K G L T A I W - S W T - A V S K A V V - K V - Q L Y G E V Y G L K Q S P R Q W Y K R F D S Y M V K . . . . . . 10342 TGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATT W A I L G A H M I V V S T T I G S M M I G L Y S E L I - L L C L L Q - A Q - - F L G Y T R S S Y D C C V Y Y N R L N D D . . . . . . 10402 CATTCATCTATCTGGTGCTTTATGTAGATGATATGTTAATAGCTGCAAAGAAGAAGTATG H S S I W C F M - M I C - - L Q R R S M I H L S G A L C R - Y V N S C K E E V - S F I Y L V L Y V D D M L I A A K K K Y . . . . . . 10462 ACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCG T F R S - R V Y L V L S L R - R I W E P H S E A E G F T - C - V - D E G S G S R D I Q K L K G L L S A E F E M K D L G A . . . . . . 10522 CTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGT L G R F - G W R S L E T E R E G N F S C S E D F R D G D H - R Q R E K E T F L V A R K I L G M E I I R D R E R R K L F L . . . . . . 10582 CACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCA H R E A T F R R S W R G L A C L H L S P T E K L H S E G L G E V W H V F I - A H S Q R S Y I Q K V L A R F G M S S S K P . . . . . . 10642 TTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGGAG L I P P V L P I S I S L P C S L H S Q E - Y P Q C C Q Y P S H C H V R S T V R R I D T P S A A N I H L T A M F A P Q S G . . . . . . 10702 AAGAGAAGGAGTATATGTCACGAGTCCCCTATGCCAGTGCCGTAGGAAGTTTAATGTATG K R R S I C H E S P M P V P - E V - C M R E G V Y V T S P L C Q C R R K F N V C E E K E Y M S R V P Y A S A V G S L M Y . . . . . . 10762 CTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGAGAGCAGATTCATGG L W S V Q G Q I - H M Q S V - R A D S W Y G L Y K A R F S T C S Q C R E Q I H G A M V C T R P D L A H A V S V E S R F M . . . . . . 10822 GACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTA D N Q G E N I G R L - R E F S G T L E V T T R E R T L A G C E E N F P V P - R Y G Q P G R E H W Q A V K R I F R Y L R G . . . . . . 10882 CATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTAGTTACTGGCTATTCTG H L T L V S F M E V I L S A - L L A I L I - R W S H L W R - Y S V L S Y W L F - T S D V G L I Y G G D T Q C L V T G Y S . . . . . . 10942 ATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCC I Q T M L E M L T Q E D R - L A M C L P F R L C W R C - H K K I D D W L C V Y P D S D Y A G D V D T R R S M T G Y V F T . . . . . . 11002 TTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTTGCAACCTACAGTGACTTTGTCTACTA L E D L S S V G R Q L C N L Q - L C L L W R I C R Q L E G N F A T Y S D F V Y Y L G G S V V S W K A T L Q P T V T L S T . . . 11062 CGGAAGCGGAGTACATGGCCTTGACAGA R K R S T W P - Q G S G V H G L D R T E A E Y M A L T Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-2_AGS-4_PPS_1 (10224 11087) (frame '0'; 864 bp, 288 residues) 1 DGFQVPGKEN HVCKLKKSLY GLKQSPRQWY KRFDSYMVKL GYTRSSYDCC VYYNRLNDDS 61 FIYLVLYVDD MLIAAKKKYD IQKLKGLLSA EFEMKDLGAA RKILGMEIIR DRERRKLFLS 121 QRSYIQKVLA RFGMSSSKPI DTPSAANIHL TAMFAPQSGE EKEYMSRVPY ASAVGSLMYA 181 MVCTRPDLAH AVSVESRFMG QPGREHWQAV KRIFRYLRGT SDVGLIYGGD TQCLVTGYSD 241 SDYAGDVDTR RSMTGYVFTL GGSVVSWKAT LQPTVTLSTT EAEYMALT AGS-5 (13378 13335,11897 11480) SCR (e 0.727 d 0.000 a 0.000,e 0.928) Exon 1 13378 13335 ( 44 n); score: 0.727 Intron 1 13334 11898 (1437 n); Pd: 0.000 Pa: 0.000 Exon 2 11897 11480 ( 418 n); score: 0.928 PGS (13378 13335,11897 11480) SGN-U314435- 3-phase translation of AGS-5 (-strand): . . . . . : . 13378 TTGATTTGATATATTTAGAAGCTTGTTGAATATGATATCACGAT : AAATATTTAATATTAT L I - Y I - K L V E Y D I T I : N I - Y Y - F D I F R S L L N M I S R : - I F N I I D L I Y L E A C - I - Y H D : K Y L I L . . . . . . 11881 TGTCTGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGACAAC C L L C G I - D N T R K Y K R E K Q D N V C C A E F E I I R E N I N A K N K T T L S V V R N L R - Y E K I - T R K T R Q . . . . . . 11821 AGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAGCAGTTTTA R F T W F T N K L A T S T G R E G A V L D L R G S P I N W L R P R E E R E Q F Y Q I Y V V H Q - I G Y V H G K R G S S F . . . . . . 11761 TTATGGAGAGGCAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTG L W R G K N R I T E - G F P - R L Y I V Y G E A K T E L Q N R V S H S V Y I - C I M E R Q K Q N Y R I G F P I A S I Y S . . . . . . 11701 CTAAGCTACGCCCTAACAGGCTTGGGCCCAACATACAGAATCAACAGAAAATTAAGGGCC L S Y A L T G L G P T Y R I N R K L R A - A T P - Q A W A Q H T E S T E N - G P A K L R P N R L G P N I Q N Q Q K I K G . . . . . . 11641 CAATACAACAACATTGTATACCGTCGGGCCGGGGGCGGAGACGCCCCCCCGGACCCCCAG Q Y N N I V Y R R A G G G D A P P D P Q N T T T L Y T V G P G A E T P P R T P R P I Q Q H C I P S G R G R R R P P G P P . . . . . . 11581 GCCAGGGGGCGCGTCGCCCCCCTGGACCCCCCGACTCGCTGACCGGGCAGCGAGACCCCC A R G R V A P L D P P T R - P G S E T P P G G A S P P W T P R L A D R A A R P P G Q G A R R P P G P P D S L T G Q R D P . . . . . 11521 GTCCTTTCTGTTTGTAGCGGGTCCGATTCAAGGCATTCAACA V L S V C S G S D S R H S T S F L F V A G P I Q G I Q R P F C L - R V R F K A F N Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-2_AGS-5_PPS_1 (11798 11505) (frame '0'; 291 bp, 97 residues) 1 IGYVHGKRGS SFIMERQKQN YRIGFPIASI YSAKLRPNRL GPNIQNQQKI KGPIQQHCIP 61 SGRGRRRPPG PPGQGARRPP GPPDSLTGQR DPRPFCL- AGS-6 (14464 14332,14173 13446) SCR (e 1.000 d 1.000 a 0.980,e 0.997) Exon 1 14464 14332 ( 133 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 Pa: 0.980 Exon 2 14173 13446 ( 728 n); score: 0.997 PGS (14464 14332,14173 13446) SGN-U322683+ 3-phase translation of AGS-6 (-strand): . . . . . . 14464 TAAAAATACCATTCCCTAATATTCATCCACCATTTTCCCTTAGAAAATGTCAAACAAATC - K Y H S L I F I H H F P L E N V K Q I K N T I P - Y S S T I F P - K M S N K S K I P F P N I H P P F S L R K C Q T N . . . . . . 14404 CCCCATTTTTCCTATTGTTGAACCTCAACACTTCAGTGACTATGGCTTCGACCCTCAAAT P H F S Y C - T S T L Q - L W L R P S N P I F P I V E P Q H F S D Y G F D P Q I P P F F L L L N L N T S V T M A S T L K . . : . . . . 14344 CCATTATTTTCAG : ATTTTGGAAGAAGCAAGAAAACACAAAATCAGAGAAACTGCGAGGTC P L F S : D F G R S K K T Q N Q R N C E V H Y F Q : I L E E A R K H K I R E T A R S S I I F R : F W K K Q E N T K S E K L R G . . . . . . 14126 ATCCATAGATACACTTCACTTCAAGCTACAGAAACCCATTTCAAAAGATGAATCATCGAA I H R Y T S L Q A T E T H F K R - I I E S I D T L H F K L Q K P I S K D E S S K H P - I H F T S S Y R N P F Q K M N H R . . . . . . 14066 GAAGATAAAAAAGAACAGTAGCCGTAAAAGATGGTGGAAAAATGCTCTGCTTTTCTTCAA E D K K E Q - P - K M V E K C S A F L Q K I K K N S S R K R W W K N A L L F F K R R - K R T V A V K D G G K M L C F S S . . . . . . 14006 AAAGACCAAATCCAACAATGAAAAATTCTACGGCGCCGACGGTGAAGTTCATCACCGGCG K D Q I Q Q - K I L R R R R - S S S P A K T K S N N E K F Y G A D G E V H H R R K R P N P T M K N S T A P T V K F I T G . . . . . . 13946 ACCTAATTTTCAAGGATCGATTTCTGGGCCGGTATACATTACTGAGAGCAGAAGTGGGTC T - F S R I D F W A G I H Y - E Q K W V P N F Q G S I S G P V Y I T E S R S G S D L I F K D R F L G R Y T L L R A E V G . . . . . . 13886 GAACACGCCTTACCGTACAACAAGCCGGCCGTCCTCCGGTCCACTCGCCGGAACTTTAAC E H A L P Y N K P A V L R S T R R N F N N T P Y R T T S R P S S G P L A G T L T R T R L T V Q Q A G R P P V H S P E L - . . . . . . 13826 TCCTAACCGGAAAGGTGATTTGGAGATCCCCTACATTAACCTCAGGGAGTTTAACATGGA S - P E R - F G D P L H - P Q G V - H G P N R K G D L E I P Y I N L R E F N M D L L T G K V I W R S P T L T S G S L T W . . . . . . 13766 CCAGCAGCAGCAGCATAAGATCTGTACAGCCTCGCCTATGCCAATATATTTGGTCACGTG P A A A A - D L Y S L A Y A N I F G H V Q Q Q Q H K I C T A S P M P I Y L V T - T S S S S I R S V Q P R L C Q Y I W S R . . . . . . 13706 AACAGAGCAGTATTTAATTAATTAAATTGATAATTTTAAGTGTTACTGCTAATTAATTAC N R A V F N - L N - - F - V L L L I N Y T E Q Y L I N - I D N F K C Y C - L I T E Q S S I - L I K L I I L S V T A N - L . . . . . . 13646 TCTTATTATCCTAATTTAGACCTTTTTAGGGTTTCAAATTACTTGAAAGTTGATGACCCA S Y Y P N L D L F R V S N Y L K V D D P L I I L I - T F L G F Q I T - K L M T H L L L S - F R P F - G F K L L E S - - P . . . . . . 13586 TGGGTATCCTCTTTTAGTTCTTTGAATTATGTGCAACTTTCTTTTATGTAAAAGTGCTTT W V S S F S S L N Y V Q L S F M - K C F G Y P L L V L - I M C N F L L C K S A L M G I L F - F F E L C A T F F Y V K V L . . . . . . 13526 AATATTGATGGCATGTAACAACTTTTTTCTTGTAAATTGTCAGCAGACAGTATGGATTTT N I D G M - Q L F S C K L S A D S M D F I L M A C N N F F L V N C Q Q T V W I F - Y - W H V T T F F L - I V S R Q Y G F . . . 13466 CTTGCAGCCTATTGTAATGAA L A A Y C N E L Q P I V M S C S L L - - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-2_AGS-6_PPS_1 (14421 14332,14173 13706) (frame '2'; 555 bp, 185 residues) 1 KMSNKSPIFP IVEPQHFSDY GFDPQIHYFQ ILEEARKHKI RETARSSIDT LHFKLQKPIS 61 KDESSKKIKK NSSRKRWWKN ALLFFKKTKS NNEKFYGADG EVHHRRPNFQ GSISGPVYIT 121 ESRSGSNTPY RTTSRPSSGP LAGTLTPNRK GDLEIPYINL REFNMDQQQQ HKICTASPMP 181 IYLVT- PGL 3 (+ strand): 36352 37752 AGS-1 (36352 37752) SCR (e 0.996) Exon 1 36352 37752 (1401 n); score: 0.996 PGS (36352 37752) SGN-U318569+ 3-phase translation of AGS-1 (+strand): . . . . . . 36352 TCAAGAACTTTCCTCCTTCTCTCTTCTTCCTTCAACTTGCCCATTTCCCCATCCATATAT S R T F L L L S S S F N L P I S P S I Y Q E L S S F S L L P S T C P F P H P Y I K N F P P S L F F L Q L A H F P I H I . . . . . . 36412 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I . . . . . . 36472 CTTCTACAATAATTTTGCTATATTTACAATTACAGATAGTCCATCTCATTGGCAGTATTT L L Q - F C Y I Y N Y R - S I S L A V F F Y N N F A I F T I T D S P S H W Q Y L S S T I I L L Y L Q L Q I V H L I G S I . . . . . . 36532 ACCATGAATAACGATACCCCAAGCATGATTCATGATCCATTGATTGATTCCACAGGAGAT T M N N D T P S M I H D P L I D S T G D P - I T I P Q A - F M I H - L I P Q E M Y H E - R Y P K H D S - S I D - F H R R . . . . . . 36592 GGAGGCTATGCATTGAGTGGAAAAATTATGCTAAGTGCTATTGTTATCTTATTCACTGTT G G Y A L S G K I M L S A I V I L F T V E A M H - V E K L C - V L L L S Y S L L W R L C I E W K N Y A K C Y C Y L I H C . . . . . . 36652 GTTGTTTTCATGGTGGGTCTTCATTTATATGCTCGTTGGTACCTTGTGTCTCAGCGCCGC V V F M V G L H L Y A R W Y L V S Q R R L F S W W V F I Y M L V G T L C L S A A C C F H G G S S F I C S L V P C V S A P . . . . . . 36712 CGTGAACTCCTTCGCCGCCGTAGGGTCAACCATCGACGGACTCATATTGTTTTCTACGTT R E L L R R R R V N H R R T H I V F Y V V N S F A A V G S T I D G L I L F S T L P - T P S P P - G Q P S T D S Y C F L R . . . . . . 36772 GATAATCCTGGTTCCGGTTTGTCTGATGCTAACCGGGGTTTGGAACAGGCGGTTCTCAGT D N P G S G L S D A N R G L E Q A V L S I I L V P V C L M L T G V W N R R F S V - - S W F R F V - C - P G F G T G G S Q . . . . . . 36832 TCCTTGCCGGTTTTTGTTTATTCCGACAAGACTCACCCGGAACCGCTGGAATGTGCTGTT S L P V F V Y S D K T H P E P L E C A V P C R F L F I P T R L T R N R W N V L F F L A G F C L F R Q D S P G T A G M C C . . . . . . 36892 TGTTTATCGGAATTTGAGGAGAATGAAAAGGGTCGGGTTTTACCCAAGTGTAATCACTCT C L S E F E E N E K G R V L P K C N H S V Y R N L R R M K R V G F Y P S V I T L L F I G I - G E - K G S G F T Q V - S L . . . . . . 36952 TTTCATTCGGAATGTATTGATATGTGGTTTCATTCTCATTCTACGTGCCCTCTTTGTCGC F H S E C I D M W F H S H S T C P L C R F I R N V L I C G F I L I L R A L F V A F S F G M Y - Y V V S F S F Y V P S L S . . . . . . 37012 TCTCCGGTGGAGGCAGTACTTATCGGACCGGATATTAACCGGGTTGAGGTGGCGGTAACA S P V E A V L I G P D I N R V E V A V T L R W R Q Y L S D R I L T G L R W R - Q L S G G G S T Y R T G Y - P G - G G G N . . . . . . 37072 GTGAACGAACCGGGTTCGAGTTCGGGTTGTGAGGAGAATAGTAGTCATCATTCTAATATG V N E P G S S S G C E E N S S H H S N M - T N R V R V R V V R R I V V I I L I - S E R T G F E F G L - G E - - S S F - Y . . . . . . 37132 ACGCCGTTGGGTTGCCGGCGAAAAGGATTGGATCTGACCGGAGTAAGAATAGAGGTACCA T P L G C R R K G L D L T G V R I E V P R R W V A G E K D W I - P E - E - R Y Q D A V G L P A K R I G S D R S K N R G T . . . . . . 37192 AGAAGGAACGATTTCGAAGCCGATTTGGAAATGGGAGTGAGAGTAAGTTCACCGGCGATT R R N D F E A D L E M G V R V S S P A I E G T I S K P I W K W E - E - V H R R F K K E R F R S R F G N G S E S K F T G D . . . . . . 37252 CAATCGAGATCACCAGCGACTCGTTTAATGTCTTTGAGAAGAATCCTAAGTATGAACAGA Q S R S P A T R L M S L R R I L S M N R N R D H Q R L V - C L - E E S - V - T E S I E I T S D S F N V F E K N P K Y E Q . . . . . . 37312 AAAACACCCACCGGAACTAGCCATTCTCCTAGTGGAAGTTGCGCCGCGGATTTTGATATA K T P T G T S H S P S G S C A A D F D I K H P P E L A I L L V E V A P R I L I - K N T H R N - P F S - W K L R R G F - Y . . . . . . 37372 GAAACCGGCGGTAGTAGTGGTGGTGGAAAAATTCAAGTCGGCGGCGAACGCATCACAACT E T G G S S G G G K I Q V G G E R I T T K P A V V V V V E K F K S A A N A S Q L R N R R - - W W W K N S S R R R T H H N . . . . . . 37432 CCGTGAGTTAAAAATGCGGGCACACATCCCTAGGCAAAAGCTGAAAAATATTGAGTCACG P - V K N A G T H P - A K A E K Y - V T R E L K M R A H I P R Q K L K N I E S R S V S - K C G H T S L G K S - K I L S H . . . . . . 37492 CCGATTGCGTGAAAACAGGAGAAACAGTGACTTGACTGACAGAAAAGTCCTATGACACGT P I A - K Q E K Q - L D - Q K S P M T R R L R E N R R N S D L T D R K V L - H V A D C V K T G E T V T - L T E K S Y D T . . . . . . 37552 GGCAATTGCTGAGTGATTCACCTTTTACAAGGCAGTCATAGTAGACTTTGAGGGGGGAAT G N C - V I H L L Q G S H S R L - G G N A I A E - F T F Y K A V I V D F E G G M W Q L L S D S P F T R Q S - - T L R G E . . . . . . 37612 GTTTGACTTGTAAATTAATGGTAGGATTAGAAAAATGCAAAGTTGTAAAGCGTTACGTGC V - L V N - W - D - K N A K L - S V T C F D L - I N G R I R K M Q S C K A L R A C L T C K L M V G L E K C K V V K R Y V . . . . . . 37672 AAGAGTCAATTACAATGTGTCTATTCTAAATTCGTTGAATTTTTTTTCCCTATTATAAAG K S Q L Q C V Y S K F V E F F F P I I K R V N Y N V S I L N S L N F F S L L - S Q E S I T M C L F - I R - I F F P Y Y K . . . 37732 TATTTGATAAACGTTGGTTCC Y L I N V G S I - - T L V V F D K R W F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-3_AGS-1_PPS_1 (36511 37437) (frame '1'; 924 bp, 308 residues) 1 SISLAVFTMN NDTPSMIHDP LIDSTGDGGY ALSGKIMLSA IVILFTVVVF MVGLHLYARW 61 YLVSQRRREL LRRRRVNHRR THIVFYVDNP GSGLSDANRG LEQAVLSSLP VFVYSDKTHP 121 EPLECAVCLS EFEENEKGRV LPKCNHSFHS ECIDMWFHSH STCPLCRSPV EAVLIGPDIN 181 RVEVAVTVNE PGSSSGCEEN SSHHSNMTPL GCRRKGLDLT GVRIEVPRRN DFEADLEMGV 241 RVSSPAIQSR SPATRLMSLR RILSMNRKTP TGTSHSPSGS CAADFDIETG GSSGGGKIQV 301 GGERITTP- 3-phase translation of AGS-1 (-strand): . . . . . . 37752 GGAACCAACGTTTATCAAATACTTTATAATAGGGAAAAAAAATTCAACGAATTTAGAATA G T N V Y Q I L Y N R E K K F N E F R I E P T F I K Y F I I G K K N S T N L E - N Q R L S N T L - - G K K I Q R I - N . . . . . . 37692 GACACATTGTAATTGACTCTTGCACGTAACGCTTTACAACTTTGCATTTTTCTAATCCTA D T L - L T L A R N A L Q L C I F L I L T H C N - L L H V T L Y N F A F F - S Y R H I V I D S C T - R F T T L H F S N P . . . . . . 37632 CCATTAATTTACAAGTCAAACATTCCCCCCTCAAAGTCTACTATGACTGCCTTGTAAAAG P L I Y K S N I P P S K S T M T A L - K H - F T S Q T F P P Q S L L - L P C K R T I N L Q V K H S P L K V Y Y D C L V K . . . . . . 37572 GTGAATCACTCAGCAATTGCCACGTGTCATAGGACTTTTCTGTCAGTCAAGTCACTGTTT V N H S A I A T C H R T F L S V K S L F - I T Q Q L P R V I G L F C Q S S H C F G E S L S N C H V S - D F S V S Q V T V . . . . . . 37512 CTCCTGTTTTCACGCAATCGGCGTGACTCAATATTTTTCAGCTTTTGCCTAGGGATGTGT L L F S R N R R D S I F F S F C L G M C S C F H A I G V T Q Y F S A F A - G C V S P V F T Q S A - L N I F Q L L P R D V . . . . . . 37452 GCCCGCATTTTTAACTCACGGAGTTGTGATGCGTTCGCCGCCGACTTGAATTTTTCCACC A R I F N S R S C D A F A A D L N F S T P A F L T H G V V M R S P P T - I F P P C P H F - L T E L - C V R R R L E F F H . . . . . . 37392 ACCACTACTACCGCCGGTTTCTATATCAAAATCCGCGGCGCAACTTCCACTAGGAGAATG T T T T A G F Y I K I R G A T S T R R M P L L P P V S I S K S A A Q L P L G E W H H Y Y R R F L Y Q N P R R N F H - E N . . . . . . 37332 GCTAGTTCCGGTGGGTGTTTTTCTGTTCATACTTAGGATTCTTCTCAAAGACATTAAACG A S S G G C F S V H T - D S S Q R H - T L V P V G V F L F I L R I L L K D I K R G - F R W V F F C S Y L G F F S K T L N . . . . . . 37272 AGTCGCTGGTGATCTCGATTGAATCGCCGGTGAACTTACTCTCACTCCCATTTCCAAATC S R W - S R L N R R - T Y S H S H F Q I V A G D L D - I A G E L T L T P I S K S E S L V I S I E S P V N L L S L P F P N . . . . . . 37212 GGCTTCGAAATCGTTCCTTCTTGGTACCTCTATTCTTACTCCGGTCAGATCCAATCCTTT G F E I V P S W Y L Y S Y S G Q I Q S F A S K S F L L G T S I L T P V R S N P F R L R N R S F L V P L F L L R S D P I L . . . . . . 37152 TCGCCGGCAACCCAACGGCGTCATATTAGAATGATGACTACTATTCTCCTCACAACCCGA S P A T Q R R H I R M M T T I L L T T R R R Q P N G V I L E - - L L F S S Q P E F A G N P T A S Y - N D D Y Y S P H N P . . . . . . 37092 ACTCGAACCCGGTTCGTTCACTGTTACCGCCACCTCAACCCGGTTAATATCCGGTCCGAT T R T R F V H C Y R H L N P V N I R S D L E P G S F T V T A T S T R L I S G P I N S N P V R S L L P P P Q P G - Y P V R . . . . . . 37032 AAGTACTGCCTCCACCGGAGAGCGACAAAGAGGGCACGTAGAATGAGAATGAAACCACAT K Y C L H R R A T K R A R R M R M K P H S T A S T G E R Q R G H V E - E - N H I - V L P P P E S D K E G T - N E N E T T . . . . . . 36972 ATCAATACATTCCGAATGAAAAGAGTGATTACACTTGGGTAAAACCCGACCCTTTTCATT I N T F R M K R V I T L G - N P T L F I S I H S E - K E - L H L G K T R P F S F Y Q Y I P N E K S D Y T W V K P D P F H . . . . . . 36912 CTCCTCAAATTCCGATAAACAAACAGCACATTCCAGCGGTTCCGGGTGAGTCTTGTCGGA L L K F R - T N S T F Q R F R V S L V G S S N S D K Q T A H S S G S G - V L S E S P Q I P I N K Q H I P A V P G E S C R . . . . . . 36852 ATAAACAAAAACCGGCAAGGAACTGAGAACCGCCTGTTCCAAACCCCGGTTAGCATCAGA I N K N R Q G T E N R L F Q T P V S I R - T K T G K E L R T A C S K P R L A S D N K Q K P A R N - E P P V P N P G - H Q . . . . . . 36792 CAAACCGGAACCAGGATTATCAACGTAGAAAACAATATGAGTCCGTCGATGGTTGACCCT Q T G T R I I N V E N N M S P S M V D P K P E P G L S T - K T I - V R R W L T L T N R N Q D Y Q R R K Q Y E S V D G - P . . . . . . 36732 ACGGCGGCGAAGGAGTTCACGGCGGCGCTGAGACACAAGGTACCAACGAGCATATAAATG T A A K E F T A A L R H K V P T S I - M R R R R S S R R R - D T R Y Q R A Y K - Y G G E G V H G G A E T Q G T N E H I N . . . . . . 36672 AAGACCCACCATGAAAACAACAACAGTGAATAAGATAACAATAGCACTTAGCATAATTTT K T H H E N N N S E - D N N S T - H N F R P T M K T T T V N K I T I A L S I I F E D P P - K Q Q Q - I R - Q - H L A - F . . . . . . 36612 TCCACTCAATGCATAGCCTCCATCTCCTGTGGAATCAATCAATGGATCATGAATCATGCT S T Q C I A S I S C G I N Q W I M N H A P L N A - P P S P V E S I N G S - I M L F H S M H S L H L L W N Q S M D H E S C . . . . . . 36552 TGGGGTATCGTTATTCATGGTAAATACTGCCAATGAGATGGACTATCTGTAATTGTAAAT W G I V I H G K Y C Q - D G L S V I V N G V S L F M V N T A N E M D Y L - L - I L G Y R Y S W - I L P M R W T I C N C K . . . . . . 36492 ATAGCAAAATTATTGTAGAAGATATATATATATATATATATATATATATATATATATATA I A K L L - K I Y I Y I Y I Y I Y I Y I - Q N Y C R R Y I Y I Y I Y I Y I Y I Y Y S K I I V E D I Y I Y I Y I Y I Y I Y . . . . . . 36432 TATATATATATATATATATATATATATGGATGGGGAAATGGGCAAGTTGAAGGAAGAAGA Y I Y I Y I Y I Y G W G N G Q V E G R R I Y I Y I Y I Y M D G E M G K L K E E E I Y I Y I Y I Y I W M G K W A S - R K K . . . 36372 GAGAAGGAGGAAAGTTCTTGA E K E E S S - R R R K V L R E G G K F L Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-3_AGS-1_PPS_1 (37239 36931) (frame '1'; 306 bp, 102 residues) 1 TYSHSHFQIG FEIVPSWYLY SYSGQIQSFS PATQRRHIRM MTTILLTTRT RTRFVHCYRH 61 LNPVNIRSDK YCLHRRATKR ARRMRMKPHI NTFRMKRVIT LG- >C01HBa0163B20.1-_PGL-3_AGS-1_PPS_2 (37575 37297) (frame '1'; 276 bp, 92 residues) 1 KVNHSAIATC HRTFLSVKSL FLLFSRNRRD SIFFSFCLGM CARIFNSRSC DAFAADLNFS 61 TTTTTAGFYI KIRGATSTRR MASSGGCFSV HT- >C01HBa0163B20.1-_PGL-3_AGS-1_PPS_3 (36894 36676) (frame '1'; 216 bp, 72 residues) 1 TNSTFQRFRV SLVGINKNRQ GTENRLFQTP VSIRQTGTRI INVENNMSPS MVDPTAAKEF 61 TAALRHKVPT SI- PGL 4 (+ strand): 38652 48583 AGS-1 (38652 39041) SCR (e 0.774) Exon 1 38652 39041 ( 390 n); score: 0.774 PGS (38652 39041) SGN-U342545+ 3-phase translation of AGS-1 (+strand): . . . . . . 38652 GGGAAACTTATATAAATATACTAAAATAAAAAAATATTTACCATTTATAGCAATAATATC G K L I - I Y - N K K I F T I Y S N N I G N L Y K Y T K I K K Y L P F I A I I S E T Y I N I L K - K N I Y H L - Q - Y . . . . . . 38712 TTTTTTTCACTTGATCACTTTTAATTCATTTTTAATACAAGTTTAATACATATTACAAAT F F S L D H F - F I F N T S L I H I T N F F H L I T F N S F L I Q V - Y I L Q I L F F T - S L L I H F - Y K F N T Y Y K . . . . . . 38772 AACAATTTATTATTCATATATAATACAAATTTTAATAATAGATAATACATTTATTGCACA N N L L F I Y N T N F N N R - Y I Y C T T I Y Y S Y I I Q I L I I D N T F I A H - Q F I I H I - Y K F - - - I I H L L H . . . . . . 38832 TTTTAATACACTTATAATACAATATGTCAAATTTTTACCAAACAAATATAATATATTTCA F - Y T Y N T I C Q I F T K Q I - Y I S F N T L I I Q Y V K F L P N K Y N I F Q I L I H L - Y N M S N F Y Q T N I I Y F . . . . . . 38892 AAAAACAATTATAATTCATATATATTGCATACATAATTCACTTTTAATTCATATTGTAGA K N N Y N S Y I L H T - F T F N S Y C R K T I I I H I Y C I H N S L L I H I V D K K Q L - F I Y I A Y I I H F - F I L - . . . . . . 38952 TTTGACATAGCATTGTTATAAATGGTAATAAATAAAAAGTATTGCTAAAATCAGTAATTA F D I A L L - M V I N K K Y C - N Q - L L T - H C Y K W - - I K S I A K I S N Y I - H S I V I N G N K - K V L L K S V I . . . 39012 TTTATTAAAATGTACTAATTTATGTAATTT F I K M Y - F M - F L L K C T N L C N I Y - N V L I Y V I Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-4_AGS-1_PPS_1 (38758 38961) (frame '2'; 201 bp, 67 residues) 1 YILQITIYYS YIIQILIIDN TFIAHFNTLI IQYVKFLPNK YNIFQKTIII HIYCIHNSLL 61 IHIVDLT- 3-phase translation of AGS-1 (-strand): . . . . . . 39041 AAATTACATAAATTAGTACATTTTAATAAATAATTACTGATTTTAGCAATACTTTTTATT K L H K L V H F N K - L L I L A I L F I N Y I N - Y I L I N N Y - F - Q Y F L F I T - I S T F - - I I T D F S N T F Y . . . . . . 38981 TATTACCATTTATAACAATGCTATGTCAAATCTACAATATGAATTAAAAGTGAATTATGT Y Y H L - Q C Y V K S T I - I K S E L C I T I Y N N A M S N L Q Y E L K V N Y V L L P F I T M L C Q I Y N M N - K - I M . . . . . . 38921 ATGCAATATATATGAATTATAATTGTTTTTTGAAATATATTATATTTGTTTGGTAAAAAT M Q Y I - I I I V F - N I L Y L F G K N C N I Y E L - L F F E I Y Y I C L V K I Y A I Y M N Y N C F L K Y I I F V W - K . . . . . . 38861 TTGACATATTGTATTATAAGTGTATTAAAATGTGCAATAAATGTATTATCTATTATTAAA L T Y C I I S V L K C A I N V L S I I K - H I V L - V Y - N V Q - M Y Y L L L K F D I L Y Y K C I K M C N K C I I Y Y - . . . . . . 38801 ATTTGTATTATATATGAATAATAAATTGTTATTTGTAATATGTATTAAACTTGTATTAAA I C I I Y E - - I V I C N M Y - T C I K F V L Y M N N K L L F V I C I K L V L K N L Y Y I - I I N C Y L - Y V L N L Y - . . . . . . 38741 AATGAATTAAAAGTGATCAAGTGAAAAAAAGATATTATTGCTATAAATGGTAAATATTTT N E L K V I K - K K D I I A I N G K Y F M N - K - S S E K K I L L L - M V N I F K - I K S D Q V K K R Y Y C Y K W - I F . . . 38681 TTTATTTTAGTATATTTATATAAGTTTCCC F I L V Y L Y K F P L F - Y I Y I S F F Y F S I F I - V S Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (39250 39297,41073 41115,44094 44903,48137 48172,48552 48583) SCR (e 0.729 d 0.000 a 0.789,e 0.512 d 0.000 a 0.000,e 0.931 d 0.000 a 0.000,e 0.639 d 0.449 a 0.000,e 0.719) Exon 1 39250 39297 ( 48 n); score: 0.729 Intron 1 39298 41072 (1775 n); Pd: 0.000 Pa: 0.789 Exon 2 41073 41115 ( 43 n); score: 0.512 Intron 2 41116 44093 (2978 n); Pd: 0.000 Pa: 0.000 Exon 3 44094 44903 ( 810 n); score: 0.931 Intron 3 44904 48136 (3233 n); Pd: 0.000 Pa: 0.000 Exon 4 48137 48172 ( 36 n); score: 0.639 Intron 4 48173 48551 ( 379 n); Pd: 0.449 Pa: 0.000 Exon 5 48552 48583 ( 32 n); score: 0.719 PGS (39250 39297,41073 41115,44094 44496) SGN-U343802- PGS (44250 44742) SGN-U339744+ PGS (44300 44903,48137 48172,48552 48583) SGN-U339745+ 3-phase translation of AGS-2 (+strand): . . . . . : . 39250 TTTCAAAATGGAAAAAAGAAAACGAGAATATAAATAATAACAAATACA : ACGCCTTGACAC F Q N G K K K T R I - I I T N T : T P - H F K M E K R K R E Y K - - Q I Q : R L D T S K W K K E N E N I N N N K Y : N A L T . . . . : . . 41085 AACAATATGATGTAATGTAGTGATTTCAGAC : TGATAGAATATATGCCTTCACTTAACAAG N N M M - C S D F R : L I E Y M P S L N K T I - C N V V I S D : - - N I C L H L T S Q Q Y D V M - - F Q T : D R I Y A F T - Q . . . . . . 44123 TAATGGACCAGGTCCCTTACTACACTAATGAATAAAACCAAGAGTTAAATGCAGTAAAAT - W T R S L T T L M N K T K S - M Q - N N G P G P L L H - - I K P R V K C S K I V M D Q V P Y Y T N E - N Q E L N A V K . . . . . . 44183 CAACACAATGATTTTACGTGGAAACCTCCTTGCTTAAGGGAGTAAAACCACGACCCGTCT Q H N D F T W K P P C L R E - N H D P S N T M I L R G N L L A - G S K T T T R L S T Q - F Y V E T S L L K G V K P R P V . . . . . . 44243 CACAGGATTTTCAATCGTTTTCATTAATCATCAAAAGCAAAAGCGAAACATGATTACACC H R I F N R F H - S S K A K A K H D Y T T G F S I V F I N H Q K Q K R N M I T P S Q D F Q S F S L I I K S K S E T - L H . . . . . . 44303 AAACGTAAGAAAGAGTTATCAATCTTACAGTTAAGCAATAGTCCTCTATTGCTTAACAAG K R K K E L S I L Q L S N S P L L L N K N V R K S Y Q S Y S - A I V L Y C L T S Q T - E R V I N L T V K Q - S S I A - Q . . . . . . 44363 CCTAAGTAGAAAACAATCTACCTACTAAGCTATCCCACCTGGACAACCTAGACTTCTAAC P K - K T I Y L L S Y P T W T T - T S N L S R K Q S T Y - A I P P G Q P R L L T A - V E N N L P T K L S H L D N L D F - . . . . . . 44423 ACAACACACCAATTCCTTTATAGATTCAGGAATGGTTTACAGTTTAAGAACAAGAGAATG T T H Q F L Y R F R N G L Q F K N K R M Q H T N S F I D S G M V Y S L R T R E - H N T P I P L - I Q E W F T V - E Q E N . . . . . . 44483 AATTCCTAAACAACTATACGAAAAGCCCCAGATATTGTTGTTGTTCTTGGAATAATTCTA N S - T T I R K A P D I V V V L G I I L I P K Q L Y E K P Q I L L L F L E - F Y E F L N N Y T K S P R Y C C C S W N N S . . . . . . 44543 CCTTTGCTTTGTAGTAGATTTTGCAAGAGTTCTTGAAAAGTTTTTATCAAGTTGCAAAAA P L L C S R F C K S S - K V F I K L Q K L C F V V D F A R V L E K F L S S C K N T F A L - - I L Q E F L K S F Y Q V A K . . . . . . 44603 CTAAACAAAAATGTTTAGGAAAGTGCCTTTTATATGGGCAAGTCACTTTCCTAAACTTCT L N K N V - E S A F Y M G K S L S - T S - T K M F R K V P F I W A S H F P K L L T K Q K C L G K C L L Y G Q V T F L N F . . . . . . 44663 TTGCAATTGGCTGGAAAAGTCATACTTTCTGACGTCATCGGGAAGTGTGCACCTACTTTC L Q L A G K V I L S D V I G K C A P T F C N W L E K S Y F L T S S G S V H L L S F A I G W K S H T F - R H R E V C T Y F . . . . . . 44723 TGTACCGTCTTCAGCTGACAATCAACTGGCTCCTCATCATGAGAGCCTAGTACCTCGACT C T V F S - Q S T G S S S - E P S T S T V P S S A D N Q L A P H H E S L V P R L L Y R L Q L T I N W L L I M R A - Y L D . . . . . . 44783 AGGTCCCTGAGTTTGTTTCATCTGCAATACTCAAGCAATAAACCTGCAATACTCAATTAA R S L S L F H L Q Y S S N K P A I L N - G P - V C F I C N T Q A I N L Q Y S I K - V P E F V S S A I L K Q - T C N T Q L . . . . . . 44843 GAAATTGATACCAAAGGTCCCCAAGTTTGTCAAATCATCAAAACTACAAAATAACATTTT E I D T K G P Q V C Q I I K T T K - H F K L I P K V P K F V K S S K L Q N N I F R N - Y Q R S P S L S N H Q N Y K I T F . : . . . : . . 44903 C : ATCAAAAGTATCACCTGCAGAATAAAAGAGAACCAG : AGTGATGAGAATTCTTCACAGAG : H Q K Y H L Q N K R E P : E - - E F F T E : I K S I T C R I K E N Q : S D E N S S Q R S : S K V S P A E - K R T R : V M R I L H R . 48575 ATGTTCTGA M F - C S D V L Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (45209 45541) SCR (e 0.848) Exon 1 45209 45541 ( 333 n); score: 0.848 PGS (45209 45541) SGN-U332042- 3-phase translation of AGS-3 (+strand): . . . . . . 45209 TAACCAACATGCCATCATAACATAAATACATTAAAAACAAACTAAAATTCATCGACATAT - P T C H H N I N T L K T N - N S S T Y N Q H A I I T - I H - K Q T K I H R H I T N M P S - H K Y I K N K L K F I D I . . . . . . 45269 TGATAAGCCACACAACAAAAAAAGTGACACACGGAAGGATTGATTAACAATCTAGGAAGA - - A T Q Q K K - H T E G L I N N L G R D K P H N K K S D T R K D - L T I - E E L I S H T T K K V T H G R I D - Q S R K . . . . . . 45329 GGGAGGGGTTTGAGATAGGGACTGGATAACAAGAGTGAGTCGTGCATTGGCAACATCATT G R G L R - G L D N K S E S C I G N I I G G V - D R D W I T R V S R A L A T S L R E G F E I G T G - Q E - V V H W Q H H . . . . . . 45389 ATCCTTGATGGCCTTTTCTTGCAGGGCAATTATCTTCACCTTCAACTCATCATTATCTTT I L D G L F L Q G N Y L H L Q L I I I F S L M A F S C R A I I F T F N S S L S F Y P - W P F L A G Q L S S P S T H H Y L . . . . . . 45449 CTCCAGAGCTTGAACAACTGAAGAACCAGGTCCCTCACTCTGTGCAGTAAGCAGTTCTGC L Q S L N N - R T R S L T L C S K Q F C S R A - T T E E P G P S L C A V S S S A S P E L E Q L K N Q V P H S V Q - A V L . . . . 45509 TTTGAGTATAACAATTTCTGCCTCTTTACCTCT F E Y N N F C L F T S L S I T I S A S L P L - V - Q F L P L Y L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (-strand): . . . . . . 45541 AGAGGTAAAGAGGCAGAAATTGTTATACTCAAAGCAGAACTGCTTACTGCACAGAGTGAG R G K E A E I V I L K A E L L T A Q S E E V K R Q K L L Y S K Q N C L L H R V R R - R G R N C Y T Q S R T A Y C T E - . . . . . . 45481 GGACCTGGTTCTTCAGTTGTTCAAGCTCTGGAGAAAGATAATGATGAGTTGAAGGTGAAG G P G S S V V Q A L E K D N D E L K V K D L V L Q L F K L W R K I M M S - R - R G T W F F S C S S S G E R - - - V E G E . . . . . . 45421 ATAATTGCCCTGCAAGAAAAGGCCATCAAGGATAATGATGTTGCCAATGCACGACTCACT I I A L Q E K A I K D N D V A N A R L T - L P C K K R P S R I M M L P M H D S L D N C P A R K G H Q G - - C C Q C T T H . . . . . . 45361 CTTGTTATCCAGTCCCTATCTCAAACCCCTCCCTCTTCCTAGATTGTTAATCAATCCTTC L V I Q S L S Q T P P S S - I V N Q S F L L S S P Y L K P L P L P R L L I N P S S C Y P V P I S N P S L F L D C - S I L . . . . . . 45301 CGTGTGTCACTTTTTTTGTTGTGTGGCTTATCAATATGTCGATGAATTTTAGTTTGTTTT R V S L F L L C G L S I C R - I L V C F V C H F F C C V A Y Q Y V D E F - F V F P C V T F F V V W L I N M S M N F S L F . . . . 45241 TAATGTATTTATGTTATGATGGCATGTTGGTTA - C I Y V M M A C W L N V F M L - W H V G L M Y L C Y D G M L V Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-4_AGS-3_PPS_1 (45541 45320) (frame '1'; 219 bp, 73 residues) 1 RGKEAEIVIL KAELLTAQSE GPGSSVVQAL EKDNDELKVK IIALQEKAIK DNDVANARLT 61 LVIQSLSQTP PSS- PGL 5 (+ strand): 56385 57184 AGS-1 (56385 57184) SCR (e 0.819) Exon 1 56385 57184 ( 800 n); score: 0.819 PGS (56385 57184) SGN-U329213- 3-phase translation of AGS-1 (+strand): . . . . . . 56385 GAAAATTAACTGCAAGCAAAATAAATAAAAAGAAAAATGTGATTCTATTACTGAATCGTT E N - L Q A K - I K R K M - F Y Y - I V K I N C K Q N K - K E K C D S I T E S L K L T A S K I N K K K N V I L L L N R . . . . . . 56445 GTGAGTACAATTCAGTTGTTCTCTTGATTCTGTCTCCTAAGTTTCTCCGCGATTCGAGGG V S T I Q L F S - F C L L S F S A I R G - V Q F S C S L D S V S - V S P R F E G C E Y N S V V L L I L S P K F L R D S R . . . . . . 56505 CCTTCAGTTTTTCTGAATTGTTGGATGATGTAGACCTCTTTGAGATATTATCGATCTCCG P S V F L N C W M M - T S L R Y Y R S P L Q F F - I V G - C R P L - D I I D L R A F S F S E L L D D V D L F E I L S I S . . . . . . 56565 GGACATTGGAAAGCGCTTCGTCGTTGTAGTTGATTTGCGGTTGAACTCCGTCGATCACTC G H W K A L R R C S - F A V E L R R S L D I G K R F V V V V D L R L N S V D H S G T L E S A S S L - L I C G - T P S I T . . . . . . 56625 CTTCGAAGAACTATTGATGTTGATGTTGTAGCTTTCTCCAATTTTTTGAATGCTTGTTGA L R R T I D V D V V A F S N F L N A C - F E E L L M L M L - L S P I F - M L V E P S K N Y - C - C C S F L Q F F E C L L . . . . . . 56685 AGAGTATTCTATCTCTCTTTGAATGTCATGTCTAGCCCCTATTTATAGTTGTAGAGAGTG R V F Y L S L N V M S S P Y L - L - R V E Y S I S L - M S C L A P I Y S C R E W K S I L S L F E C H V - P L F I V V E S . . . . . . 56745 GACAAGGTTGTTTGTGATTGTCAAATGATGTCATTTTGACACTTGGCACATTTTGATTCG D K V V C D C Q M M S F - H L A H F D S T R L F V I V K - C H F D T W H I L I R G Q G C L - L S N D V I L T L G T F - F . . . . . . 56805 TTCTTGCATTTGACTGGGACTACCACATCATTTGGACACGTAGCGTCACCTTGTTGGTCT F L H L T G T T T S F G H V A S P C W S S C I - L G L P H H L D T - R H L V G L V L A F D W D Y H I I W T R S V T L L V . . . . . . 56865 TAGATAATTAGTCATTGTGACACGTGTCATGGGTTTGGGCTTTAAGGTGAAATGAACCTT - I I S H C D T C H G F G L - G E M N L R - L V I V T R V M G L G F K V K - T L L D N - S L - H V S W V W A L R - N E P . . . . . . 56925 GAATTTGAATTTAATAAGATGGACTTATTTATTTGTAAAGCCCAAATTAATTTTTCATCC E F E F N K M D L F I C K A Q I N F S S N L N L I R W T Y L F V K P K L I F H P - I - I - - D G L I Y L - S P N - F F I . . . . . . 56985 CAAATGAACATTGATTTAATTCAAATTTTGTATGAATTTGATCCAATACAATTTATTTGT Q M N I D L I Q I L Y E F D P I Q F I C K - T L I - F K F C M N L I Q Y N L F V P N E H - F N S N F V - I - S N T I Y L . . . . . . 57045 CTACAAATGCCCCTTATTTTGAGGACTGTCGATGTAGATGTTTGCCGAAGTTTGGCGACA L Q M P L I L R T V D V D V C R S L A T Y K C P L F - G L S M - M F A E V W R Q S T N A P Y F E D C R C R C L P K F G D . . . . . . 57105 AGACTTGAAGTAGTCATGAATGTGTTTTCCCTTTTTTTAGACTCCTCTGTGTGTAGGCTT R L E V V M N V F S L F L D S S V C R L D L K - S - M C F P F F - T P L C V G F K T - S S H E C V F P F F R L L C V - A . . 57165 TCCAAATTTTGACGAAGAAA S K F - R R P N F D E E F Q I L T K K Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-5_AGS-1_PPS_1 (56910 57176) (frame '1'; 264 bp, 88 residues) 1 GEMNLEFEFN KMDLFICKAQ INFSSQMNID LIQILYEFDP IQFICLQMPL ILRTVDVDVC 61 RSLATRLEVV MNVFSLFLDS SVCRLSKF- >C01HBa0163B20.1+_PGL-5_AGS-1_PPS_2 (56387 56593) (frame '0'; 204 bp, 68 residues) 1 KLTASKINKK KNVILLLNRC EYNSVVLLIL SPKFLRDSRA FSFSELLDDV DLFEILSISG 61 TLESASSL- 3-phase translation of AGS-1 (-strand): . . . . . . 57184 TTTCTTCGTCAAAATTTGGAAAGCCTACACACAGAGGAGTCTAAAAAAAGGGAAAACACA F L R Q N L E S L H T E E S K K R E N T F F V K I W K A Y T Q R S L K K G K T H S S S K F G K P T H R G V - K K G K H . . . . . . 57124 TTCATGACTACTTCAAGTCTTGTCGCCAAACTTCGGCAAACATCTACATCGACAGTCCTC F M T T S S L V A K L R Q T S T S T V L S - L L Q V L S P N F G K H L H R Q S S I H D Y F K S C R Q T S A N I Y I D S P . . . . . . 57064 AAAATAAGGGGCATTTGTAGACAAATAAATTGTATTGGATCAAATTCATACAAAATTTGA K I R G I C R Q I N C I G S N S Y K I - K - G A F V D K - I V L D Q I H T K F E Q N K G H L - T N K L Y W I K F I Q N L . . . . . . 57004 ATTAAATCAATGTTCATTTGGGATGAAAAATTAATTTGGGCTTTACAAATAAATAAGTCC I K S M F I W D E K L I W A L Q I N K S L N Q C S F G M K N - F G L Y K - I S P N - I N V H L G - K I N L G F T N K - V . . . . . . 56944 ATCTTATTAAATTCAAATTCAAGGTTCATTTCACCTTAAAGCCCAAACCCATGACACGTG I L L N S N S R F I S P - S P N P - H V S Y - I Q I Q G S F H L K A Q T H D T C H L I K F K F K V H F T L K P K P M T R . . . . . . 56884 TCACAATGACTAATTATCTAAGACCAACAAGGTGACGCTACGTGTCCAAATGATGTGGTA S Q - L I I - D Q Q G D A T C P N D V V H N D - L S K T N K V T L R V Q M M W - V T M T N Y L R P T R - R Y V S K - C G . . . . . . 56824 GTCCCAGTCAAATGCAAGAACGAATCAAAATGTGCCAAGTGTCAAAATGACATCATTTGA V P V K C K N E S K C A K C Q N D I I - S Q S N A R T N Q N V P S V K M T S F D S P S Q M Q E R I K M C Q V S K - H H L . . . . . . 56764 CAATCACAAACAACCTTGTCCACTCTCTACAACTATAAATAGGGGCTAGACATGACATTC Q S Q T T L S T L Y N Y K - G L D M T F N H K Q P C P L S T T I N R G - T - H S T I T N N L V H S L Q L - I G A R H D I . . . . . . 56704 AAAGAGAGATAGAATACTCTTCAACAAGCATTCAAAAAATTGGAGAAAGCTACAACATCA K E R - N T L Q Q A F K K L E K A T T S K R D R I L F N K H S K N W R K L Q H Q Q R E I E Y S S T S I Q K I G E S Y N I . . . . . . 56644 ACATCAATAGTTCTTCGAAGGAGTGATCGACGGAGTTCAACCGCAAATCAACTACAACGA T S I V L R R S D R R S S T A N Q L Q R H Q - F F E G V I D G V Q P Q I N Y N D N I N S S S K E - S T E F N R K S T T T . . . . . . 56584 CGAAGCGCTTTCCAATGTCCCGGAGATCGATAATATCTCAAAGAGGTCTACATCATCCAA R S A F Q C P G D R - Y L K E V Y I I Q E A L S N V P E I D N I S K R S T S S N T K R F P M S R R S I I S Q R G L H H P . . . . . . 56524 CAATTCAGAAAAACTGAAGGCCCTCGAATCGCGGAGAAACTTAGGAGACAGAATCAAGAG Q F R K T E G P R I A E K L R R Q N Q E N S E K L K A L E S R R N L G D R I K R T I Q K N - R P S N R G E T - E T E S R . . . . . . 56464 AACAACTGAATTGTACTCACAACGATTCAGTAATAGAATCACATTTTTCTTTTTATTTAT N N - I V L T T I Q - - N H I F L F I Y T T E L Y S Q R F S N R I T F F F L F I E Q L N C T H N D S V I E S H F S F Y L . . 56404 TTTGCTTGCAGTTAATTTTC F A C S - F L L A V N F F C L Q L I F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-5_AGS-1_PPS_1 (56634 56386) (frame '2'; 249 bp, 83 residues) 1 FFEGVIDGVQ PQINYNDEAL SNVPEIDNIS KRSTSSNNSE KLKALESRRN LGDRIKRTTE 61 LYSQRFSNRI TFFFLFILLA VNF PGL 6 (+ strand): 63293 65127 AGS-1 (63293 65127) SCR (e 0.986) Exon 1 63293 65127 (1835 n); score: 0.986 PGS (63293 65127) SGN-U312517+ PGS (63351 64196) SGN-U333615+ PGS (63400 64154) SGN-U333614+ 3-phase translation of AGS-1 (+strand): . . . . . . 63293 ATAAACACAGCCTTCAATAAAACCCCTCTGAGTTCTTCACTTACAAGAAGAACCATAGGG I N T A F N K T P L S S S L T R R T I G - T Q P S I K P L - V L H L Q E E P - G K H S L Q - N P S E F F T Y K K N H R . . . . . . 63353 GTTGTTTCATAGGGAACTCCCCCCATAAAAAAAAATCCAAAAAAACAAAAAAACCAAAAA V V S - G T P P I K K N P K K Q K N Q K L F H R E L P P - K K I Q K N K K T K K G C F I G N S P H K K K S K K T K K P K . . . . . . 63413 AATGACAAAGAAGGTGGTAATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGT N D K E G G N W W N S F C S C G G L C G M T K K V V I G G I A S V L V V A C V V K - Q R R W - L V E - L L F L W W L V W . . . . . . 63473 GGCAGCCTGTGTCACCCTGACTAAACATGATTCTGATACATCATCAAATGGAGTTGCAAC G S L C H P D - T - F - Y I I K W S C N A A C V T L T K H D S D T S S N G V A T W Q P V S P - L N M I L I H H Q M E L Q . . . . . . 63533 TTCAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAA F N K V S - I Y V S T H T I Q T N L - K S T K S V E S M C Q P T P Y K Q T C E K L Q Q S Q L N L C V N P H H T N K L V K . . . . . . 63593 GACCCTCTCCGCAGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGA D P L R S K E C V R S K G L H Q G C I R T L S A A K N V S D P K D Y I K V A F E R P S P Q Q R M C P I Q R T T S R L H S . . . . . . 63653 AGCCACTGTGGCAGACATCAAGAATGCCATCAAGAACACTGAGCCAGTTAAGAAAGCTGC S H C G R H Q E C H Q E H - A S - E S C A T V A D I K N A I K N T E P V K K A A K P L W Q T S R M P S R T L S Q L R K L . . . . . . 63713 CAGTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGGTGTTTGATCTAGCCGT Q - S L H Q R R S P C L - R G V - S S R S D P Y T K D A L L A C E E V F D L A V P V I L T P K T L S L L V K R C L I - P . . . . . . 63773 TGAGGAACTAAGGGGCTCTATCGCTAGGATTGAGAACTTTGATTTCTCAAAGATGAAGGA - G T K G L Y R - D - E L - F L K D E G E E L R G S I A R I E N F D F S K M K D L R N - G A L S L G L R T L I S Q R - R . . . . . . 63833 TATAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTCGTTGCTTATGAAGAGACTTGTTT Y S G - P Q V M A - R C R C L - R D L F I V D D L K S W L S A V V A Y E E T C L I - W M T S S H G L A L S L L M K R L V . . . . . . 63893 AGATGGTTTCACCAAATCAGAATACAGTGCAACCCGTGACGAAATGATGAAGCTAATGAG R W F H Q I R I Q C N P - R N D E A N E D G F T K S E Y S A T R D E M M K L M S - M V S P N Q N T V Q P V T K - - S - - . . . . . . 63953 TACCACCCGGGAGCTGAGTAGCAATGCTCTTTCCATGGTCAACAACTTTGGTGAAATGAT Y H P G A E - Q C S F H G Q Q L W - N D T T R E L S S N A L S M V N N F G E M I V P P G S - V A M L F P W S T T L V K - . . . . . . 64013 CACACAAAACACAGGCCTTACCCGCAAATTGTTATCAAACAGTGACTCATTTGTCGAAGC H T K H R P Y P Q I V I K Q - L I C R S T Q N T G L T R K L L S N S D S F V E A S H K T Q A L P A N C Y Q T V T H L S K . . . . . . 64073 TAGTAACCGTAAGCTCCTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTACCAG - - P - A P S N F C L Q A - C C G F Y Q S N R K L L Q I S A S K P N A V V S T S L V T V S S F K F L P P S L M L W F L P . . . . . . 64133 TGGAGGCGGACAATACAAGACCATTCAGGAAGCACTTCAAGCTGTCCCCAGGAGCAGTCC W R R T I Q D H S G S T S S C P Q E Q S G G G Q Y K T I Q E A L Q A V P R S S P V E A D N T R P F R K H F K L S P G A V . . . . . . 64193 AACTCCTTTCGTTATCCTGATCAAGGCGGGTACATACAAGGAACACATTGAAATCGAAAA N S F R Y P D Q G G Y I Q G T H - N R K T P F V I L I K A G T Y K E H I E I E K Q L L S L S - S R R V H T R N T L K S K . . . . . . 64253 GAACATGCTAAATGTTGTGCTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGA E H A K C C A Y W - R P N Q D H N H R - N M L N V V L I G E G P T K T I I T G D R T C - M L C L L V K A Q P R P - S P V . . . . . . 64313 CCAGGCAGTAGTTCCTAACCGTATATCAACATGGCATACAGCCACCCTTGGTGTTTGTGG P G S S S - P Y I N M A Y S H P W C L W Q A V V P N R I S T W H T A T L G V C G T R Q - F L T V Y Q H G I Q P P L V F V . . . . . . 64373 TGATGGTTTCGTTATGAAGGACATGGGTATTGAAAACACAGCAGGACCCACAAAAGAACA - W F R Y E G H G Y - K H S R T H K R T D G F V M K D M G I E N T A G P T K E Q V M V S L - R T W V L K T Q Q D P Q K N . . . . . . 64433 AGCCGTTGCATTGAGAATTAATGCTGATAAGGCTGTTCTCTACAACTGCAATATCGATGG S R C I E N - C - - G C S L Q L Q Y R W A V A L R I N A D K A V L Y N C N I D G K P L H - E L M L I R L F S T T A I S M . . . . . . 64493 TTACCAAGACACGTTATATGCTCACTCAGGAAGACAATTTTATCGTGATTGTACCATTAC L P R H V I C S L R K T I L S - L Y H Y Y Q D T L Y A H S G R Q F Y R D C T I T V T K T R Y M L T Q E D N F I V I V P L . . . . . . 64553 AGGCACCATTGATTTCTTGTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGAT R H H - F L V W - C K C C F P K L Q I D G T I D F L F G D A S A V F Q N C K L I Q A P L I S C L V M Q V L F S K T A N - . . . . . . 64613 TGTGAGGAAACCAGGTCCTAATCAAGCTTGCATGATCACTGCTCAAGGAAGGATGAGAAA C E E T R S - S S L H D H C S R K D E K V R K P G P N Q A C M I T A Q G R M R K L - G N Q V L I K L A - S L L K E G - E . . . . . . 64673 AGATTCCTTAGGTGGATTCGTTATCCAAAATTGTGACATCAAGGCTGATCAAGCACTCAC R F L R W I R Y P K L - H Q G - S S T H D S L G G F V I Q N C D I K A D Q A L T K I P - V D S L S K I V T S R L I K H S . . . . . . 64733 TAGCGCCAATCCACCAGTCAAAGTCTATCTTGGACGTCCATGGAAGGAGTTTTCCAAGAC - R Q S T S Q S L S W T S M E G V F Q D S A N P P V K V Y L G R P W K E F S K T L A P I H Q S K S I L D V H G R S F P R . . . . . . 64793 CATCATAATGCAATCAAACATCGATGGATTCGTTGATCCATCAGGATGGTCACCATGGAA H H N A I K H R W I R - S I R M V T M E I I M Q S N I D G F V D P S G W S P W N P S - C N Q T S M D S L I H Q D G H H G . . . . . . 64853 CACAACTGATTTTGGAATACACACATGTTTTTATGCAGAGTATCAGAACAGAGGACCAGG H N - F W N T H M F L C R V S E Q R T R T T D F G I H T C F Y A E Y Q N R G P G T Q L I L E Y T H V F M Q S I R T E D Q . . . . . . 64913 TGCTGCACTTGACAAAAGAGTCTCCACATGGAGAGGTTACCAAAAGGATATTTCAGGAGA C C T - Q K S L H M E R L P K G Y F R R A A L D K R V S T W R G Y Q K D I S G D V L H L T K E S P H G E V T K R I F Q E . . . . . . 64973 CGTTATTAACAGCTTCACTGCCGGTAAATTCATTAATACACAACAGCCATGGTTACCAAT R Y - Q L H C R - I H - Y T T A M V T N V I N S F T A G K F I N T Q Q P W L P M T L L T A S L P V N S L I H N S H G Y Q . . . . . . 65033 GTTTGATATTCCCTATGAAGCTGGCATGATGAAGGTGTAATTACATATACCATTCATCCT V - Y S L - S W H D E G V I T Y T I H P F D I P Y E A G M M K V - L H I P F I L C L I F P M K L A - - R C N Y I Y H S S . . . . 65093 GTAATTTTTTCTAATTATTCAAAATTATATTTCCT V I F S N Y S K L Y F - F F L I I Q N Y I S C N F F - L F K I I F P Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-6_AGS-1_PPS_1 (63381 65072) (frame '2'; 1689 bp, 563 residues) 1 KKIQKNKKTK KMTKKVVIGG IASVLVVACV VAACVTLTKH DSDTSSNGVA TSTKSVESMC 61 QPTPYKQTCE KTLSAAKNVS DPKDYIKVAF EATVADIKNA IKNTEPVKKA ASDPYTKDAL 121 LACEEVFDLA VEELRGSIAR IENFDFSKMK DIVDDLKSWL SAVVAYEETC LDGFTKSEYS 181 ATRDEMMKLM STTRELSSNA LSMVNNFGEM ITQNTGLTRK LLSNSDSFVE ASNRKLLQIS 241 ASKPNAVVST SGGGQYKTIQ EALQAVPRSS PTPFVILIKA GTYKEHIEIE KNMLNVVLIG 301 EGPTKTIITG DQAVVPNRIS TWHTATLGVC GDGFVMKDMG IENTAGPTKE QAVALRINAD 361 KAVLYNCNID GYQDTLYAHS GRQFYRDCTI TGTIDFLFGD ASAVFQNCKL IVRKPGPNQA 421 CMITAQGRMR KDSLGGFVIQ NCDIKADQAL TSANPPVKVY LGRPWKEFSK TIIMQSNIDG 481 FVDPSGWSPW NTTDFGIHTC FYAEYQNRGP GAALDKRVST WRGYQKDISG DVINSFTAGK 541 FINTQQPWLP MFDIPYEAGM MKV- 3-phase translation of AGS-1 (-strand): . . . . . . 65127 AGGAAATATAATTTTGAATAATTAGAAAAAATTACAGGATGAATGGTATATGTAATTACA R K Y N F E - L E K I T G - M V Y V I T G N I I L N N - K K L Q D E W Y M - L H E I - F - I I R K N Y R M N G I C N Y . . . . . . 65067 CCTTCATCATGCCAGCTTCATAGGGAATATCAAACATTGGTAACCATGGCTGTTGTGTAT P S S C Q L H R E Y Q T L V T M A V V Y L H H A S F I G N I K H W - P W L L C I T F I M P A S - G I S N I G N H G C C V . . . . . . 65007 TAATGAATTTACCGGCAGTGAAGCTGTTAATAACGTCTCCTGAAATATCCTTTTGGTAAC - - I Y R Q - S C - - R L L K Y P F G N N E F T G S E A V N N V S - N I L L V T L M N L P A V K L L I T S P E I S F W - . . . . . . 64947 CTCTCCATGTGGAGACTCTTTTGTCAAGTGCAGCACCTGGTCCTCTGTTCTGATACTCTG L S M W R L F C Q V Q H L V L C S D T L S P C G D S F V K C S T W S S V L I L C P L H V E T L L S S A A P G P L F - Y S . . . . . . 64887 CATAAAAACATGTGTGTATTCCAAAATCAGTTGTGTTCCATGGTGACCATCCTGATGGAT H K N M C V F Q N Q L C S M V T I L M D I K T C V Y S K I S C V P W - P S - W I A - K H V C I P K S V V F H G D H P D G . . . . . . 64827 CAACGAATCCATCGATGTTTGATTGCATTATGATGGTCTTGGAAAACTCCTTCCATGGAC Q R I H R C L I A L - W S W K T P S M D N E S I D V - L H Y D G L G K L L P W T S T N P S M F D C I M M V L E N S F H G . . . . . . 64767 GTCCAAGATAGACTTTGACTGGTGGATTGGCGCTAGTGAGTGCTTGATCAGCCTTGATGT V Q D R L - L V D W R - - V L D Q P - C S K I D F D W W I G A S E C L I S L D V R P R - T L T G G L A L V S A - S A L M . . . . . . 64707 CACAATTTTGGATAACGAATCCACCTAAGGAATCTTTTCTCATCCTTCCTTGAGCAGTGA H N F G - R I H L R N L F S S F L E Q - T I L D N E S T - G I F S H P S L S S D S Q F W I T N P P K E S F L I L P - A V . . . . . . 64647 TCATGCAAGCTTGATTAGGACCTGGTTTCCTCACAATCAATTTGCAGTTTTGGAAAACAG S C K L D - D L V S S Q S I C S F G K Q H A S L I R T W F P H N Q F A V L E N S I M Q A - L G P G F L T I N L Q F W K T . . . . . . 64587 CACTTGCATCACCAAACAAGAAATCAATGGTGCCTGTAATGGTACAATCACGATAAAATT H L H H Q T R N Q W C L - W Y N H D K I T C I T K Q E I N G A C N G T I T I K L A L A S P N K K S M V P V M V Q S R - N . . . . . . 64527 GTCTTCCTGAGTGAGCATATAACGTGTCTTGGTAACCATCGATATTGCAGTTGTAGAGAA V F L S E H I T C L G N H R Y C S C R E S S - V S I - R V L V T I D I A V V E N C L P E - A Y N V S W - P S I L Q L - R . . . . . . 64467 CAGCCTTATCAGCATTAATTCTCAATGCAACGGCTTGTTCTTTTGTGGGTCCTGCTGTGT Q P Y Q H - F S M Q R L V L L W V L L C S L I S I N S Q C N G L F F C G S C C V T A L S A L I L N A T A C S F V G P A V . . . . . . 64407 TTTCAATACCCATGTCCTTCATAACGAAACCATCACCACAAACACCAAGGGTGGCTGTAT F Q Y P C P S - R N H H H K H Q G W L Y F N T H V L H N E T I T T N T K G G C M F S I P M S F I T K P S P Q T P R V A V . . . . . . 64347 GCCATGTTGATATACGGTTAGGAACTACTGCCTGGTCACCGGTGATTATGGTCTTGGTTG A M L I Y G - E L L P G H R - L W S W L P C - Y T V R N Y C L V T G D Y G L G W C H V D I R L G T T A W S P V I M V L V . . . . . . 64287 GGCCTTCACCAATAAGCACAACATTTAGCATGTTCTTTTCGATTTCAATGTGTTCCTTGT G L H Q - A Q H L A C S F R F Q C V P C A F T N K H N I - H V L F D F N V F L V G P S P I S T T F S M F F S I S M C S L . . . . . . 64227 ATGTACCCGCCTTGATCAGGATAACGAAAGGAGTTGGACTGCTCCTGGGGACAGCTTGAA M Y P P - S G - R K E L D C S W G Q L E C T R L D Q D N E R S W T A P G D S L K Y V P A L I R I T K G V G L L L G T A - . . . . . . 64167 GTGCTTCCTGAATGGTCTTGTATTGTCCGCCTCCACTGGTAGAAACCACAGCATTAGGCT V L P E W S C I V R L H W - K P Q H - A C F L N G L V L S A S T G R N H S I R L S A S - M V L Y C P P P L V E T T A L G . . . . . . 64107 TGGAGGCAGAAATTTGAAGGAGCTTACGGTTACTAGCTTCGACAAATGAGTCACTGTTTG W R Q K F E G A Y G Y - L R Q M S H C L G G R N L K E L T V T S F D K - V T V - L E A E I - R S L R L L A S T N E S L F . . . . . . 64047 ATAACAATTTGCGGGTAAGGCCTGTGTTTTGTGTGATCATTTCACCAAAGTTGTTGACCA I T I C G - G L C F V - S F H Q S C - P - Q F A G K A C V L C D H F T K V V D H D N N L R V R P V F C V I I S P K L L T . . . . . . 63987 TGGAAAGAGCATTGCTACTCAGCTCCCGGGTGGTACTCATTAGCTTCATCATTTCGTCAC W K E H C Y S A P G W Y S L A S S F R H G K S I A T Q L P G G T H - L H H F V T M E R A L L L S S R V V L I S F I I S S . . . . . . 63927 GGGTTGCACTGTATTCTGATTTGGTGAAACCATCTAAACAAGTCTCTTCATAAGCAACGA G L H C I L I W - N H L N K S L H K Q R G C T V F - F G E T I - T S L F I S N D R V A L Y S D L V K P S K Q V S S - A T . . . . . . 63867 CAGCGCTAAGCCATGACTTGAGGTCATCCACTATATCCTTCATCTTTGAGAAATCAAAGT Q R - A M T - G H P L Y P S S L R N Q S S A K P - L E V I H Y I L H L - E I K V T A L S H D L R S S T I S F I F E K S K . . . . . . 63807 TCTCAATCCTAGCGATAGAGCCCCTTAGTTCCTCAACGGCTAGATCAAACACCTCTTCAC S Q S - R - S P L V P Q R L D Q T P L H L N P S D R A P - F L N G - I K H L F T F S I L A I E P L S S S T A R S N T S S . . . . . . 63747 AAGCAAGGAGAGCGTCTTTGGTGTAAGGATCACTGGCAGCTTTCTTAACTGGCTCAGTGT K Q G E R L W C K D H W Q L S - L A Q C S K E S V F G V R I T G S F L N W L S V Q A R R A S L V - G S L A A F L T G S V . . . . . . 63687 TCTTGATGGCATTCTTGATGTCTGCCACAGTGGCTTCGAATGCAACCTTGATGTAGTCCT S - W H S - C L P Q W L R M Q P - C S P L D G I L D V C H S G F E C N L D V V L F L M A F L M S A T V A S N A T L M - S . . . . . . 63627 TTGGATCGGACACATTCTTTGCTGCGGAGAGGGTCTTTTCACAAGTTTGTTTGTATGGTG L D R T H S L L R R G S F H K F V C M V W I G H I L C C G E G L F T S L F V W C F G S D T F F A A E R V F S Q V C L Y G . . . . . . 63567 TGGGTTGACACATAGATTCAACTGACTTTGTTGAAGTTGCAACTCCATTTGATGATGTAT W V D T - I Q L T L L K L Q L H L M M Y G L T H R F N - L C - S C N S I - - C I V G - H I D S T D F V E V A T P F D D V . . . . . . 63507 CAGAATCATGTTTAGTCAGGGTGACACAGGCTGCCACCACACAAGCCACCACAAGAACAG Q N H V - S G - H R L P P H K P P Q E Q R I M F S Q G D T G C H H T S H H K N R S E S C L V R V T Q A A T T Q A T T R T . . . . . . 63447 AAGCTATTCCACCAATTACCACCTTCTTTGTCATTTTTTTGGTTTTTTTGTTTTTTTGGA K L F H Q L P P S L S F F W F F C F F G S Y S T N Y H L L C H F F G F F V F L D E A I P P I T T F F V I F L V F L F F W . . . . . . 63387 TTTTTTTTTATGGGGGGAGTTCCCTATGAAACAACCCCTATGGTTCTTCTTGTAAGTGAA F F F M G G V P Y E T T P M V L L V S E F F L W G E F P M K Q P L W F F L - V K I F F Y G G S S L - N N P Y G S S C K - . . . . 63327 GAACTCAGAGGGGTTTTATTGAAGGCTGTGTTTAT E L R G V L L K A V F N S E G F Y - R L C L R T Q R G F I E G C V Y Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-6_AGS-1_PPS_1 (64471 64169) (frame '0'; 300 bp, 100 residues) 1 RTALSALILN ATACSFVGPA VFSIPMSFIT KPSPQTPRVA VCHVDIRLGT TAWSPVIMVL 61 VGPSPISTTF SMFFSISMCS LYVPALIRIT KGVGLLLGTA - >C01HBa0163B20.1-_PGL-6_AGS-1_PPS_2 (63764 63543) (frame '2'; 219 bp, 73 residues) 1 IKHLFTSKES VFGVRITGSF LNWLSVLDGI LDVCHSGFEC NLDVVLWIGH ILCCGEGLFT 61 SLFVWCGLTH RFN- >C01HBa0163B20.1-_PGL-6_AGS-1_PPS_3 (64090 63875) (frame '0'; 213 bp, 71 residues) 1 RSLRLLASTN ESLFDNNLRV RPVFCVIISP KLLTMERALL LSSRVVLISF IISSRVALYS 61 DLVKPSKQVS S- >C01HBa0163B20.1-_PGL-6_AGS-1_PPS_4 (63559 63359) (frame '0'; 198 bp, 66 residues) 1 HIDSTDFVEV ATPFDDVSES CLVRVTQAAT TQATTRTEAI PPITTFFVIF LVFLFFWIFF 61 YGGSSL- PGL 7 (- strand): 76976 67314 AGS-1 (72153 71957,70349 70332,67757 67721,67357 67314) SCR (e 0.835 d 0.000 a 0.978,e 0.611 d 0.735 a 0.000,e 0.703 d 0.000 a 0.000,e 0.727) Exon 1 72153 71957 ( 197 n); score: 0.835 Intron 1 71956 70350 (1607 n); Pd: 0.000 Pa: 0.978 Exon 2 70349 70332 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 Pa: 0.000 Exon 3 67757 67721 ( 37 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 Pa: 0.000 Exon 4 67357 67314 ( 44 n); score: 0.727 PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-U323900+ PGS (72153 71957) SGN-U344810- 3-phase translation of AGS-1 (-strand): . . . . . . 72153 CTATTTATTCTCTGTAACCAAAAATACTCTGATTTATTAATATAAATATACCTCACCGCC L F I L C N Q K Y S D L L I - I Y L T A Y L F S V T K N T L I Y - Y K Y T S P P I Y S L - P K I L - F I N I N I P H R . . . . . . 72093 TTAGAATTTTACTTACGGGTTGTTACCATGAAATATTGGGTTTTCTCTTTCTCTCTCTAG L E F Y L R V V T M K Y W V F S F S L - - N F T Y G L L P - N I G F S L S L S R L R I L L T G C Y H E I L G F L F L S L . . . . . . 72033 ATCTCTCATCTCTTTCTCTTGAAAGTTCTTGTGTTCTTCATTCATCTAGTGTGTGTGCGT I S H L F L L K V L V F F I H L V C V R S L I S F S - K F L C S S F I - C V C V D L S S L S L E S S C V L H S S S V C A . . : . . : . . 71973 GAATTCGATCCTAACAG : CCGTTTTCAAAACTAAAG : ATATTCAATACTATCACAAGAACAA E F D P N S : R F Q N - R : Y S I L S Q E Q N S I L T : A V F K T K : D I Q Y Y H K N N - I R S - Q : P F S K L K : I F N T I T R T . . : . . . . 67732 TATCACAGTTCA : AAGCTTGAAACCCTAGACAGATTGATCCATTCCTTTCCAGATTC Y H S S : K L E T L D R L I H S F P D I T V Q : S L K P - T D - S I P F Q I I S Q F : K A - N P R Q I D P F L S R F Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (76976 76576,74693 74687,72320 72316,71956 71600,71110 70587,69080 69050) SCR (e 0.784 d 0.990 a 0.892,e 0.714 d 0.844 a 0.929,e 0.600 d 0.000 a 0.788,e 0.725 d 0.000 a 0.000,e 0.845 d 0.210 a 0.000,e 0.742) Exon 1 76976 76576 ( 401 n); score: 0.784 Intron 1 76575 74694 (1882 n); Pd: 0.990 Pa: 0.892 Exon 2 74693 74687 ( 7 n); score: 0.714 Intron 2 74686 72321 (2366 n); Pd: 0.844 Pa: 0.929 Exon 3 72320 72316 ( 5 n); score: 0.600 Intron 3 72315 71957 ( 359 n); Pd: 0.000 Pa: 0.788 Exon 4 71956 71600 ( 357 n); score: 0.725 Intron 4 71599 71111 ( 489 n); Pd: 0.000 Pa: 0.000 Exon 5 71110 70587 ( 524 n); score: 0.845 Intron 5 70586 69081 (1506 n); Pd: 0.210 Pa: 0.000 Exon 6 69080 69050 ( 31 n); score: 0.742 PGS (76976 76576,74693 74687,72320 72316,71956 71600,71110 70587,69080 69050) SGN-U312517- 3-phase translation of AGS-2 (-strand): . . . . . . 76976 AATAAATGATATAGGTTAATTAGACCTTCATAATGCCAGGCTCAAAGGGAATATCACTCT N K - Y R L I R P S - C Q A Q R E Y H S I N D I G - L D L H N A R L K G N I T L - M I - V N - T F I M P G S K G I S L . . . . . . 76916 TGGGTAGCCAAGGGTCTCTTGTGTTGATGAAATTGCCGTCAATGAATTGGTTAATAGTGT W V A K G L L C - - N C R Q - I G - - C G - P R V S C V D E I A V N E L V N S V L G S Q G S L V L M K L P S M N W L I V . . . . . . 76856 CTCCTGAAATTCCCTTTTGGTAACCTCTCCATGTTGAGATTTTTTTGTCAAGTGCAGCAC L L K F P F G N L S M L R F F C Q V Q H S - N S L L V T S P C - D F F V K C S T S P E I P F W - P L H V E I F L S S A A . . . . . . 76796 CTGGTTCTCTGTTCTGATACTCTGCATAAAACATGTGTGTTTTCCAAAATTAGTTGTGTT L V L C S D T L H K T C V F S K I S C V W F S V L I L C I K H V C F P K L V V F P G S L F - Y S A - N M C V F Q N - L C . . . . . . 76736 CCATGGTGACCATCCTGATGGATCGATGAATGCATCAATGTTTGATTGCATTATGATGGT P W - P S - W I D E C I N V - L H Y D G H G D H P D G S M N A S M F D C I M M V S M V T I L M D R - M H Q C L I A L - W . . . . . . 76676 CTTGGAATACTCCTTCCATGGACGTCCAATATAGGCTTTTAATGGTGCTAGGGAACCCTG L G I L L P W T S N I G F - W C - G T L L E Y S F H G R P I - A F N G A R E P C S W N T P S M D V Q Y R L L M V L G N P . . . . . : : . : 76616 CCTGAGGCTTGATGTCACAATTCTGGATAACTAATCCAGAG : CAGGAAG : TTGTT : TTTAGAC P E A - C H N S G - L I Q S : R K : L F : L D L R L D V T I L D N - S R : A G S : C : F - T A - G L M S Q F W I T N P E : Q E : V V : F R . . . . . . 71949 TTTCCTTGAGAAGTGACCATGCAAGCTTGTGTATCACCTGGTTTCCTCACAATCAATTGG F P - E V T M Q A C V S P G F L T I N W F L E K - P C K L V Y H L V S S Q S I G L S L R S D H A S L C I T W F P H N Q L . . . . . . 71889 CAGTTTTGGAAGCATCACTAAAAATGAAATCAATGTTGCCTGTAATGATAGAGTCACGGA Q F W K H H - K - N Q C C L - - - S H G S F G S I T K N E I N V A C N D R V T E A V L E A S L K M K S M L P V M I E S R . . . . . . 71829 ACAATTATCTGTACGAGTGAGCGTATAGGATGTATTGGAAACCATCGATTTTGTAGTTGT T I I C T S E R I G C I G N H R F C S C Q L S V R V S V - D V L E T I D F V V V N N Y L Y E - A Y R M Y W K P S I L - L . . . . . . 71769 AGACAATTGCTTTATCATCATTAATCCTCAATGCAACAACTTGTTCTTTTACTGGTCCTG R Q L L Y H H - S S M Q Q L V L L L V L D N C F I I I N P Q C N N L F F Y W S C - T I A L S S L I L N A T T C S F T G P . . . . . . 71709 CTCTGTTTTCAATACCGATGTCCCTGATAACGAACCTTTCACCAGAAACACCAAGGGAGG L C F Q Y R C P - - R T F H Q K H Q G R S V F N T D V P D N E P F T R N T K G G A L F S I P M S L I T N L S P E T P R E . . . . . : . 71649 TTGTATGCCATTTTACTACACCGCCACCATTCTTACTCCCTTGTCACCCA : TGATTATGGT L Y A I L L H R H H S Y S L V T H : D Y G C M P F Y Y T A T I L T P L S P : M I M V V V C H F T T P P P F L L P C H P : - L W . . . . . . 71100 CTTGGTTGGCCCTTCACCAATAAACACAACATTTGCCTGTCTTTTCAATTTCAATGTGTT L G W P F T N K H N I C L S F Q F Q C V L V G P S P I N T T F A C L F N F N V F S W L A L H Q - T Q H L P V F S I S M C . . . . . . 71040 CCTTGTATGTACCGGCCTTGATCAGGATAATGAAAGGAGTTGTATAGTTCATGAGGACAG P C M Y R P - S G - - K E L Y S S - G Q L V C T G L D Q D N E R S C I V H E D S S L Y V P A L I R I M K G V V - F M R T . . . . . . 70980 CGTTAAGTTCTCCTGAAATGGTCTTGTATTGTCCGTCACCACTTGCAGAAACCACAGCAT R - V L L K W S C I V R H H L Q K P Q H V K F S - N G L V L S V T T C R N H S I A L S S P E M V L Y C P S P L A E T T A . . . . . . 70920 TAGGCTTGGAGGGAGAAATTTGAAGGAGCTTATGGCTACTGGCTTCAACAAACCAGTCAC - A W R E K F E G A Y G Y W L Q Q T S H R L G G R N L K E L M A T G F N K P V T L G L E G E I - R S L W L L A S T N Q S . . . . . . 70860 TATTTGATAACAATTTGCGGGTAAGGCCAGTGGTTTTTGTGATCGTTTCACCGAAAACTG Y L I T I C G - G Q W F L - S F H R K L I - - Q F A G K A S G F C D R F T E N C L F D N N L R V R P V V F V I V S P K T . . . . . . 70800 TTGGCCATGGAAAGAGCATTGATACTCAGCTCTTTCGTATTCAATATCTTCATCATTTTG L A M E R A L I L S S F V F N I F I I L W P W K E H - Y S A L S Y S I S S S F C V G H G K S I D T Q L F R I Q Y L H H F . . . . . . 70740 TTGTGGGTTGCACTCTGTTCTGATTTGATAAAACCATCTGAGCAAGTCTCTTCATAGGCA L W V A L C S D L I K P S E Q V S S - A C G L H S V L I - - N H L S K S L H R Q V V G C T L F - F D K T I - A S L F I G . . . . . . 70680 ATCACAGTGCTAAGCCATGTCTTGAGGTCTTCCACCACATCCTTGATCTTAGAGAAATCA I T V L S H V L R S S T T S L I L E K S S Q C - A M S - G L P P H P - S - R N Q N H S A K P C L E V F H H I L D L R E I . . . . : . . 70620 AAGTTCTCAATCTTAGCGATAGAGCGTCTTTGGT : CCCCAACAACTAGATTCTCACTCCTC K F S I L A I E R L W : S P T T R F S L L S S Q S - R - S V F G : P Q Q L D S H S S K V L N L S D R A S L V : P N N - I L T P . 69054 CTCAC L S P H Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-7_AGS-2_PPS_1 (71801 71600,71110 70965) (frame '2'; 345 bp, 115 residues) 1 DVLETIDFVV VDNCFIIINP QCNNLFFYWS CSVFNTDVPD NEPFTRNTKG GCMPFYYTAT 61 ILTPLSPMIM VLVGPSPINT TFACLFNFNV FLVCTGLDQD NERSCIVHED SVKFS- >C01HBa0163B20.1-_PGL-7_AGS-2_PPS_2 (76611 76576,74693 74687,72320 72316,71956 71810) (frame '0'; 192 bp, 64 residues) 1 GLMSQFWITN PEQEVVFRLS LRSDHASLCI TWFPHNQLAV LEASLKMKSM LPVMIESRNN 61 YLYE- AGS-3 (72765 72555) SCR (e 0.882) Exon 1 72765 72555 ( 211 n); score: 0.882 PGS (72765 72555) SGN-U340801- 3-phase translation of AGS-3 (-strand): . . . . . . 72765 GGATGCTGATCTTGGTGGGGATATTGACTCGAGCAAGAGTACATCCGGGTACATTTACAC G C - S W W G Y - L E Q E Y I R V H L H D A D L G G D I D S S K S T S G Y I Y T M L I L V G I L T R A R V H P G T F T . . . . . . 72705 CATAGGTGGAACAGCAATGAGTTGGATGTCCAGGCTTCAGAATTTGTATTTCTCTTTCAT H R W N S N E L D V Q A S E F V F L F H I G G T A M S W M S R L Q N L Y F S F I P - V E Q Q - V G C P G F R I C I S L S . . . . . . 72645 CTACTGAAGCTGAGTATGTGGCATAGCTGAAGTTGGGAAAGAGATGATATGGCTGGTAGA L L K L S M W H S - S W E R D D M A G R Y - S - V C G I A E V G K E M I W L V D S T E A E Y V A - L K L G K R - Y G W - . . . . 72585 TTATCTTAAGGAATTGGGCAAGAAGCAGAGC L S - G I G Q E A E Y L K E L G K K Q S I I L R N W A R S R Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (+strand): . . . . . . 72555 GCTCTGCTTCTTGCCCAATTCCTTAAGATAATCTACCAGCCATATCATCTCTTTCCCAAC A L L L A Q F L K I I Y Q P Y H L F P N L C F L P N S L R - S T S H I I S F P T S A S C P I P - D N L P A I S S L S Q . . . . . . 72615 TTCAGCTATGCCACATACTCAGCTTCAGTAGATGAAAGAGAAATACAAATTCTGAAGCCT F S Y A T Y S A S V D E R E I Q I L K P S A M P H T Q L Q - M K E K Y K F - S L L Q L C H I L S F S R - K R N T N S E A . . . . . . 72675 GGACATCCAACTCATTGCTGTTCCACCTATGGTGTAAATGTACCCGGATGTACTCTTGCT G H P T H C C S T Y G V N V P G C T L A D I Q L I A V P P M V - M Y P D V L L L W T S N S L L F H L W C K C T R M Y S C . . . . 72735 CGAGTCAATATCCCCACCAAGATCAGCATCC R V N I P T K I S I E S I S P P R S A S S S Q Y P H Q D Q H Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-7_AGS-3_PPS_1 (72555 72764) (frame '1'; 210 bp, 70 residues) 1 ALLLAQFLKI IYQPYHLFPN FSYATYSASV DEREIQILKP GHPTHCCSTY GVNVPGCTLA 61 RVNIPTKISI PGL 8 (+ strand): 72895 82313 AGS-1 (72895 73734) SCR (e 0.861) Exon 1 72895 73734 ( 840 n); score: 0.861 PGS (72895 73734) SGN-U340346- 3-phase translation of AGS-1 (+strand): . . . . . . 72895 ACAACTCCCAATGCATGTGGTATATCAGGTCTAGTGCAGACTATAACATACATCAAACTA T T P N A C G I S G L V Q T I T Y I K L Q L P M H V V Y Q V - C R L - H T S N Y N S Q C M W Y I R S S A D Y N I H Q T . . . . . . 72955 CCAACTGCTGAAGCATATGGAACAAGTGCCATGTGATCACGCTCCTCGGAAGTCTTGGGT P T A E A Y G T S A M - S R S S E V L G Q L L K H M E Q V P C D H A P R K S W V T N C - S I W N K C H V I T L L G S L G . . . . . . 73015 GACTGCTCCTTTGACAATTTAAAGTGATTTGCCAATGGAGTAGTCCTGGGTTTAGCATCA D C S F D N L K - F A N G V V L G L A S T A P L T I - S D L P M E - S W V - H H - L L L - Q F K V I C Q W S S P G F S I . . . . . . 73075 TTAACCCTGAATCTGCTCAGTACCTTCTCAATGTACAACTTCTGAGATAGATTTAAAGTG L T L N L L S T F S M Y N F - D R F K V - P - I C S V P S Q C T T S E I D L K C I N P E S A Q Y L L N V Q L L R - I - S . . . . . . 73135 CCAACAGATCTATCCCGAGAAATCTCCATCCCCAAAATCTATTTTGCTGGACCCAAATCT P T D L S R E I S I P K I Y F A G P K S Q Q I Y P E K S P S P K S I L L D P N L A N R S I P R N L H P Q N L F C W T Q I . . . . . . 73195 GTCATCTCAAATGCTGTAGACAACCTTGTCTTCAGATTGTTAATCTCTCTCATACTAGAT V I S N A V D N L V F R L L I S L I L D S S Q M L - T T L S S D C - S L S Y - I C H L K C C R Q P C L Q I V N L S H T R . . . . . . 73255 CTTACAATCAACATATCATCCATATACAAGAGTAGAACGACATATGAATCAGTGTATTTC L T I N I S S I Y K S R T T Y E S V Y F L Q S T Y H P Y T R V E R H M N Q C I S S Y N Q H I I H I Q E - N D I - I S V F . . . . . . 73315 TTGAAGTAACAACAAGGATCCTTTTCAGCTTTGCAGAATCCACCCTTGGTCATGAAGGAG L K - Q Q G S F S A L Q N P P L V M K E - S N N K D P F Q L C R I H P W S - R S L E V T T R I L F S F A E S T L G H E G . . . . . . 73375 TTAAACTTCTTGTACCACTGCCTTGGTGCTTGCTTTAGTCCATACAAGCTCCTGGTGAGC L N F L Y H C L G A C F S P Y K L L V S - T S C T T A L V L A L V H T S S W - A V K L L V P L P W C L L - S I Q A P G E . . . . . . 73435 TTGCACACCATGTGTTCCTTGCCTGGAACTACAAATCCTTCCGGTTGCTGCATATAGATC L H T M C S L P G T T N P S G C C I - I C T P C V P C L E L Q I L P V A A Y R S L A H H V F L A W N Y K S F R L L H I D . . . . . . 73495 TCTTTGTCCATATCTCCATATAAAAACACTGTTTTTACATCCATATGCTCTAGATGCAAA S L S I S P Y K N T V F T S I C S R C K L C P Y L H I K T L F L H P Y A L D A N L F V H I S I - K H C F Y I H M L - M Q . . . . . . 73555 TTCTCCGATGCAACAACACTCAACAGAATTCGAATAGAGGCTAACTTCACAACAGAAGAA F S D A T T L N R I R I E A N F T T E E S P M Q Q H S T E F E - R L T S Q Q K K I L R C N N T Q Q N S N R G - L H N R R . . . . . . 73615 AATATTTAAGCATAATCAATACCTTTCCTTTGTGAATATCCTTTAACCACTAAACGAGCC N I - A - S I P F L C E Y P L T T K R A I F K H N Q Y L S F V N I L - P L N E P K Y L S I I N T F P L - I S F N H - T S . . . . . . 73675 TTGAACCTTCTTTTGCCATCTGGTTCACTCTTGATTCTGAACACCCACTTATTTAACAAA L N L L L P S G S L L I L N T H L F N K - T F F C H L V H S - F - T P T Y L T L E P S F A I W F T L D S E H P L I - Q Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-8_AGS-1_PPS_1 (73120 73323) (frame '1'; 201 bp, 67 residues) 1 DRFKVPTDLS REISIPKIYF AGPKSVISNA VDNLVFRLLI SLILDLTINI SSIYKSRTTY 61 ESVYFLK- 3-phase translation of AGS-1 (-strand): . . . . . . 73734 TTTGTTAAATAAGTGGGTGTTCAGAATCAAGAGTGAACCAGATGGCAAAAGAAGGTTCAA F V K - V G V Q N Q E - T R W Q K K V Q L L N K W V F R I K S E P D G K R R F K C - I S G C S E S R V N Q M A K E G S . . . . . . 73674 GGCTCGTTTAGTGGTTAAAGGATATTCACAAAGGAAAGGTATTGATTATGCTTAAATATT G S F S G - R I F T K E R Y - L C L N I A R L V V K G Y S Q R K G I D Y A - I F R L V - W L K D I H K G K V L I M L K Y . . . . . . 73614 TTCTTCTGTTGTGAAGTTAGCCTCTATTCGAATTCTGTTGAGTGTTGTTGCATCGGAGAA F F C C E V S L Y S N S V E C C C I G E S S V V K L A S I R I L L S V V A S E N F L L L - S - P L F E F C - V L L H R R . . . . . . 73554 TTTGCATCTAGAGCATATGGATGTAAAAACAGTGTTTTTATATGGAGATATGGACAAAGA F A S R A Y G C K N S V F I W R Y G Q R L H L E H M D V K T V F L Y G D M D K E I C I - S I W M - K Q C F Y M E I W T K . . . . . . 73494 GATCTATATGCAGCAACCGGAAGGATTTGTAGTTCCAGGCAAGGAACACATGGTGTGCAA D L Y A A T G R I C S S R Q G T H G V Q I Y M Q Q P E G F V V P G K E H M V C K R S I C S N R K D L - F Q A R N T W C A . . . . . . 73434 GCTCACCAGGAGCTTGTATGGACTAAAGCAAGCACCAAGGCAGTGGTACAAGAAGTTTAA A H Q E L V W T K A S T K A V V Q E V - L T R S L Y G L K Q A P R Q W Y K K F N S S P G A C M D - S K H Q G S G T R S L . . . . . . 73374 CTCCTTCATGACCAAGGGTGGATTCTGCAAAGCTGAAAAGGATCCTTGTTGTTACTTCAA L L H D Q G W I L Q S - K G S L L L L Q S F M T K G G F C K A E K D P C C Y F K T P S - P R V D S A K L K R I L V V T S . . . . . . 73314 GAAATACACTGATTCATATGTCGTTCTACTCTTGTATATGGATGATATGTTGATTGTAAG E I H - F I C R S T L V Y G - Y V D C K K Y T D S Y V V L L L Y M D D M L I V R R N T L I H M S F Y S C I W M I C - L - . . . . . . 73254 ATCTAGTATGAGAGAGATTAACAATCTGAAGACAAGGTTGTCTACAGCATTTGAGATGAC I - Y E R D - Q S E D K V V Y S I - D D S S M R E I N N L K T R L S T A F E M T D L V - E R L T I - R Q G C L Q H L R - . . . . . . 73194 AGATTTGGGTCCAGCAAAATAGATTTTGGGGATGGAGATTTCTCGGGATAGATCTGTTGG R F G S S K I D F G D G D F S G - I C W D L G P A K - I L G M E I S R D R S V G Q I W V Q Q N R F W G W R F L G I D L L . . . . . . 73134 CACTTTAAATCTATCTCAGAAGTTGTACATTGAGAAGGTACTGAGCAGATTCAGGGTTAA H F K S I S E V V H - E G T E Q I Q G - T L N L S Q K L Y I E K V L S R F R V N A L - I Y L R S C T L R R Y - A D S G L . . . . . . 73074 TGATGCTAAACCCAGGACTACTCCATTGGCAAATCACTTTAAATTGTCAAAGGAGCAGTC - C - T Q D Y S I G K S L - I V K G A V D A K P R T T P L A N H F K L S K E Q S M M L N P G L L H W Q I T L N C Q R S S . . . . . . 73014 ACCCAAGACTTCCGAGGAGCGTGATCACATGGCACTTGTTCCATATGCTTCAGCAGTTGG T Q D F R G A - S H G T C S I C F S S W P K T S E E R D H M A L V P Y A S A V G H P R L P R S V I T W H L F H M L Q Q L . . . . . . 72954 TAGTTTGATGTATGTTATAGTCTGCACTAGACCTGATATACCACATGCATTGGGAGTTGT - F D V C Y S L H - T - Y T T C I G S C S L M Y V I V C T R P D I P H A L G V V V - C M L - S A L D L I Y H M H W E L Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-8_AGS-1_PPS_1 (73619 73173) (frame '2'; 444 bp, 148 residues) 1 IFSSVVKLAS IRILLSVVAS ENLHLEHMDV KTVFLYGDMD KEIYMQQPEG FVVPGKEHMV 61 CKLTRSLYGL KQAPRQWYKK FNSFMTKGGF CKAEKDPCCY FKKYTDSYVV LLLYMDDMLI 121 VRSSMREINN LKTRLSTAFE MTDLGPAK- >C01HBa0163B20.1-_PGL-8_AGS-1_PPS_2 (73172 72897) (frame '2'; 276 bp, 92 residues) 1 ILGMEISRDR SVGTLNLSQK LYIEKVLSRF RVNDAKPRTT PLANHFKLSK EQSPKTSEER 61 DHMALVPYAS AVGSLMYVIV CTRPDIPHAL GV AGS-2 (73913 73939,74571 74587,79314 79356,79749 79784,80354 80366,82132 82313) SCR (e 0.741 d 0.900 a 0.000,e 0.618 d 0.912 a 0.917,e 0.535 d 0.224 a 0.188,e 0.611 d 0.451 a 0.937,e 0.538 d 0.000 a 0.000,e 0.857) Exon 1 73913 73939 ( 27 n); score: 0.741 Intron 1 73940 74570 ( 631 n); Pd: 0.900 Pa: 0.000 Exon 2 74571 74587 ( 17 n); score: 0.618 Intron 2 74588 79313 (4726 n); Pd: 0.912 Pa: 0.917 Exon 3 79314 79356 ( 43 n); score: 0.535 Intron 3 79357 79748 ( 392 n); Pd: 0.224 Pa: 0.188 Exon 4 79749 79784 ( 36 n); score: 0.611 Intron 4 79785 80353 ( 569 n); Pd: 0.451 Pa: 0.937 Exon 5 80354 80366 ( 13 n); score: 0.538 Intron 5 80367 82131 (1765 n); Pd: 0.000 Pa: 0.000 Exon 6 82132 82313 ( 182 n); score: 0.857 PGS (73913 73939,74571 74587,79314 79356,79749 79784,80354 80366,82132 82313) SGN-U317281- 3-phase translation of AGS-2 (+strand): . . . : . . : . 73913 TATCTGGTGCCCTCATGGATCTAGATG : CCATTGTCAGACCTTAG : ACACACAAACCAAAAA Y L V P S W I - M : P L S D L R : H T N Q K I W C P H G S R C : H C Q T L : D T Q T K N S G A L M D L D : A I V R P - : T H K P K . . . : . . . 79330 TTCAAATTCCATTGTCGAAAGAGCTGT : GAGTATCCATGGATTTGCAACTATTCATTCGAA F K F H C R K S C : E Y P W I C N Y S F E S N S I V E R A V : S I H G F A T I H S K I Q I P L S K E L : - V S M D L Q L F I R . : . : . . . . 79782 AAC : GAAAGAAACGCTA : TCTTGAATCACTTGGATATCATTTATATTTTTCATCAATTTTAT N : E R N A : I L N H L D I I Y I F H Q F Y T : K E T L : S - I T W I S F I F F I N F I K : R K K R Y : L E S L G Y H L Y F S S I L . . . . . . 82176 TTCTAATATTCATAACATTATACTCTAAATTAAATCTCAACATTTATATCGAAGGATTAA F - Y S - H Y T L N - I S T F I S K D - S N I H N I I L - I K S Q H L Y R R I N F L I F I T L Y S K L N L N I Y I E G L . . . . . . 82236 TTTTCTATTTTAATTAGAATTCTAAATTAAATCTCAACATTTACATGAGAGGATTAATTT F S I L I R I L N - I S T F T - E D - F F L F - L E F - I K S Q H L H E R I N F I F Y F N - N S K L N L N I Y M R G L I . . 82296 TCTATTTTAATTAGAATT S I L I R I L F - L E F Y F N - N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (74192 74226,74344 74736) SCR (e 0.514 d 0.958 a 0.000,e 0.910) Exon 1 74192 74226 ( 35 n); score: 0.514 Intron 1 74227 74343 ( 117 n); Pd: 0.958 Pa: 0.000 Exon 2 74344 74736 ( 393 n); score: 0.910 PGS (74192 74226,74344 74726) SGN-U345337+ PGS (74361 74736) SGN-U345337+ 3-phase translation of AGS-3 (+strand): . . . . : . . 74192 GCCTATGAAGTAACACTTCACAGCCTTGGCATCAG : GAACTGATGGTCCCCTATTGATCAA A Y E V T L H S L G I R : N - W S P I D Q P M K - H F T A L A S : G T D G P L L I K L - S N T S Q P W H Q : E L M V P Y - S . . . . . . 74369 GTATGCAACTTTGCTCACAACATCCGCCCAAAGTGTTTTGGGCAGCCCACAGTGTATCCT V C N F A H N I R P K C F G Q P T V Y P Y A T L L T T S A Q S V L G S P Q C I L S M Q L C S Q H P P K V F W A A H S V S . . . . . . 74429 CATACTCCTTTCAAGCTCATTCAATGTTCTGTTCATCCTCTCAACAATTCTATTCTGCCT H T P F K L I Q C S V H P L N N S I L P I L L S S S F N V L F I L S T I L F C L S Y S F Q A H S M F C S S S Q Q F Y S A . . . . . . 74489 TGCCTCACCAGGAACTGTTCTCATCAATCTGATTCCGTCAACTGCACAGAATGCCTTGAA C L T R N C S H Q S D S V N C T E C L E A S P G T V L I N L I P S T A Q N A L N L P H Q E L F S S I - F R Q L H R M P - . . . . . . 74549 CTCTGATTTGTCATACTCTCCTCCATTGTCAGACCTTAGGCATTTGACTTTCAAACCGAT L - F V I L S S I V R P - A F D F Q T D S D L S Y S P P L S D L R H L T F K P I T L I C H T L L H C Q T L G I - L S N R . . . . . . 74609 CTGATTCTCAACTTCAGCTTTCCACTTCTTGAAAGTTGCAAACACATCTAACTTATGCTT L I L N F S F P L L E S C K H I - L M L - F S T S A F H F L K V A N T S N L C F S D S Q L Q L S T S - K L Q T H L T Y A . . . . . . 74669 CAAGAAGTAAACCGATACCTTCCTGCTGAAATCATCAATGAAGGTAACATAGAATCTGGA Q E V N R Y L P A E I I N E G N I E S G K K - T D T F L L K S S M K V T - N L D S R S K P I P S C - N H Q - R - H R I W . 74729 TCCTCCAA S S P P I L Q Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-8_AGS-3_PPS_1 (74205 74226,74344 74612) (frame '2'; 288 bp, 96 residues) 1 HFTALASGTD GPLLIKYATL LTTSAQSVLG SPQCILILLS SSFNVLFILS TILFCLASPG 61 TVLINLIPST AQNALNSDLS YSPPLSDLRH LTFKPI- AGS-4 (75748 76286) SCR (e 0.879) Exon 1 75748 76286 ( 539 n); score: 0.879 PGS (75748 76286) SGN-U323900- 3-phase translation of AGS-4 (+strand): . . . . . . 75748 TGACAACAAAATCAACGCCTTAATTTCATCTTCGAAATTGATATCCACAGAATTGAGTTG - Q Q N Q R L N F I F E I D I H R I E L D N K I N A L I S S S K L I S T E L S - T T K S T P - F H L R N - Y P Q N - V . . . . . . 75808 ACTCACAATCATATTAAACTCGTTTATATGATCAGAAACAGATCCATTCTCATACATCTG T H N H I K L V Y M I R N R S I L I H L L T I I L N S F I - S E T D P F S Y I C D S Q S Y - T R L Y D Q K Q I H S H T S . . . . . . 75868 TAAATTGAACAATCTACGCATCAAATATACCTTGTTCATAGCCGATGGTTTTTCATACAT - I E Q S T H Q I Y L V H S R W F F I H K L N N L R I K Y T L F I A D G F S Y M V N - T I Y A S N I P C S - P M V F H T . . . . . . 75928 GTTTGACAGTTCCTTCAACAGACCGAACGTCTTCACAATGTTGAACGCCACGTTTCTTGA V - Q F L Q Q T E R L H N V E R H V S - F D S S F N R P N V F T M L N A T F L D C L T V P S T D R T S S Q C - T P R F L . . . . . . 75988 CAAAGTCAACCGGATCAACCCTAGAGCCTGGCGATCCTTGAGTTTCCACTTCTCCTCCGT Q S Q P D Q P - S L A I L E F P L L L R K V N R I N P R A W R S L S F H F S S V T K S T G S T L E P G D P - V S T S P P . . . . . . 76048 CATGGATTCCGGTTTCACCCTGGTCAACGGTTTATGAAGATCTTTCTGGTACAGATAATC H G F R F H P G Q R F M K I F L V Q I I M D S G F T L V N G L - R S F W Y R - S S W I P V S P W S T V Y E D L S G T D N . . . . . . 76108 TTTGATCTGCATCTTCCAGAAACTAAAATCGGATCCATCAAACTTCTCGATTCCAAGCTT F D L H L P E T K I G S I K L L D S K L L I C I F Q K L K S D P S N F S I P S F L - S A S S R N - N R I H Q T S R F Q A . . . . . . 76168 CAAACTATCCATCTTCAGTGATCGTGTTGTATCTCCTTATCTCTGATGCCAGTTGTTAGG Q T I H L Q - S C C I S L S L M P V V R K L S I F S D R V V S P Y L - C Q L L G S N Y P S S V I V L Y L L I S D A S C - . . . . . . 76228 ATCGAATTAAAGCACACACACTAGATGAATGAAAACACAAGAACTTTTAAAAGAAAGAG I E L K H T H - M N E N T R T F K R K S N - S T H T R - M K T Q E L L K E R D R I K A H T L D E - K H K N F - K K E Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-8_AGS-4_PPS_1 (75839 76084) (frame '2'; 243 bp, 81 residues) 1 SETDPFSYIC KLNNLRIKYT LFIADGFSYM FDSSFNRPNV FTMLNATFLD KVNRINPRAW 61 RSLSFHFSSV MDSGFTLVNG L- 3-phase translation of AGS-4 (-strand): . . . . . . 76286 CTCTTTCTTTTAAAAGTTCTTGTGTTTTCATTCATCTAGTGTGTGTGCTTTAATTCGATC L F L L K V L V F S F I - C V C F N S I S F F - K F L C F H S S S V C A L I R S L S F K S S C V F I H L V C V L - F D . . . . . . 76226 CTAACAACTGGCATCAGAGATAAGGAGATACAACACGATCACTGAAGATGGATAGTTTGA L T T G I R D K E I Q H D H - R W I V - - Q L A S E I R R Y N T I T E D G - F E P N N W H Q R - G D T T R S L K M D S L . . . . . . 76166 AGCTTGGAATCGAGAAGTTTGATGGATCCGATTTTAGTTTCTGGAAGATGCAGATCAAAG S L E S R S L M D P I L V S G R C R S K A W N R E V - W I R F - F L E D A D Q R K L G I E K F D G S D F S F W K M Q I K . . . . . . 76106 ATTATCTGTACCAGAAAGATCTTCATAAACCGTTGACCAGGGTGAAACCGGAATCCATGA I I C T R K I F I N R - P G - N R N P - L S V P E R S S - T V D Q G E T G I H D D Y L Y Q K D L H K P L T R V K P E S M . . . . . . 76046 CGGAGGAGAAGTGGAAACTCAAGGATCGCCAGGCTCTAGGGTTGATCCGGTTGACTTTGT R R R S G N S R I A R L - G - S G - L C G G E V E T Q G S P G S R V D P V D F V T E E K W K L K D R Q A L G L I R L T L . . . . . . 75986 CAAGAAACGTGGCGTTCAACATTGTGAAGACGTTCGGTCTGTTGAAGGAACTGTCAAACA Q E T W R S T L - R R S V C - R N C Q T K K R G V Q H C E D V R S V E G T V K H S R N V A F N I V K T F G L L K E L S N . . . . . . 75926 TGTATGAAAAACCATCGGCTATGAACAAGGTATATTTGATGCGTAGATTGTTCAATTTAC C M K N H R L - T R Y I - C V D C S I Y V - K T I G Y E Q G I F D A - I V Q F T M Y E K P S A M N K V Y L M R R L F N L . . . . . . 75866 AGATGTATGAGAATGGATCTGTTTCTGATCATATAAACGAGTTTAATATGATTGTGAGTC R C M R M D L F L I I - T S L I - L - V D V - E W I C F - S Y K R V - Y D C E S Q M Y E N G S V S D H I N E F N M I V S . . . . . . 75806 AACTCAATTCTGTGGATATCAATTTCGAAGATGAAATTAAGGCGTTGATTTTGTTGTCA N S I L W I S I S K M K L R R - F C C T Q F C G Y Q F R R - N - G V D F V V Q L N S V D I N F E D E I K A L I L L S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-8_AGS-4_PPS_1 (76203 75748) (frame '0'; 456 bp, 152 residues) 1 GDTTRSLKMD SLKLGIEKFD GSDFSFWKMQ IKDYLYQKDL HKPLTRVKPE SMTEEKWKLK 61 DRQALGLIRL TLSRNVAFNI VKTFGLLKEL SNMYEKPSAM NKVYLMRRLF NLQMYENGSV 121 SDHINEFNMI VSQLNSVDIN FEDEIKALIL LS AGS-5 (80349 81134) SCR (e 0.658) Exon 1 80349 81134 ( 786 n); score: 0.658 PGS (80349 81134) SGN-U329056- 3-phase translation of AGS-5 (+strand): . . . . . . 80349 AACAGGAAAGAAACGCTAGTGGAACATGCTTCGCTAGCTCAATTCAAAAACTACGCAAGA N R K E T L V E H A S L A Q F K N Y A R T G K K R - W N M L R - L N S K T T Q E Q E R N A S G T C F A S S I Q K L R K . . . . . . 80409 ATGTAATACAGTAGCATCCTCAAAAGCACGAGGACCTACCAAACTCCGAATGAATGCTGA M - Y S S I L K S T R T Y Q T P N E C - C N T V A S S K A R G P T K L R M N A D N V I Q - H P Q K H E D L P N S E - M L . . . . . . 80469 CGTCCGGATAGCAGCAACAACGAACCTATAGCTCTACGCCCACCTGTGCCTGCACCTAAA R P D S S N N E P I A L R P P V P A P K V R I A A T T N L - L Y A H L C L H L K T S G - Q Q Q R T Y S S T P T C A C T - . . . . . . 80529 AGTAGATATTTGTATGGAACTAACACTTGTACTAAGTATGCGTATCTTCAAGAACACACC S R Y L Y G T N T C T K Y A Y L Q E H T V D I C M E L T L V L S M R I F K N T P K - I F V W N - H L Y - V C V S S R T H . . . . . . 80589 AAGCACATGCATAACAAGGAATAACTCTTTCCTAAAAACATGATTTATGGAAGGTTAAGT K H M H N K E - L F P K N M I Y G R L S S T C I T R N N S F L K T - F M E G - V Q A H A - Q G I T L S - K H D L W K V K . . . . . . 80649 CAGTGGACATGCTAAATTGAGGTTACGAAAGTTAGTGAACTTTCCAAATTGAGTTAGGAA Q W T C - I E V T K V S E L S K L S - E S G H A K L R L R K L V N F P N - V R K S V D M L N - G Y E S - - T F Q I E L G . . . . . . 80709 GGTTATGCCATGAGAGTAACATGCATCATTATAATAATCGTATTGCACACAACACATAAC G Y A M R V T C I I I I I V L H T T H N V M P - E - H A S L - - S Y C T Q H I T R L C H E S N M H H Y N N R I A H N T - . . . . . . 80769 ATCTTTATACATATCATAGCACATAACATATAACACATAACTTCTTTCATATTATTCATT I F I H I I A H N I - H I T S F I L F I S L Y I S - H I T Y N T - L L S Y Y S F H L Y T Y H S T - H I T H N F F H I I H . . . . . . 80829 CATATGTCATGAGACCTTGTCATCATGGACTTGGTATTTAGACGTTTCAAAATGAGGGCT H M S - D L V I M D L V F R R F K M R A I C H E T L S S W T W Y L D V S K - G L S Y V M R P C H H G L G I - T F Q N E G . . . . . . 80889 CAACATATGTGACCTAAACTAGGGAGTCTTCATTAGAAAACATAGAGTCTGCTTCATCCA Q H M - P K L G S L H - K T - S L L H P N I C D L N - G V F I R K H R V C F I H S T Y V T - T R E S S L E N I E S A S S . . . . . . 80949 TTCATACATACTTCATTTCATTTCATTCATAGGCCAGTGTGGACACCACCTATACCTAGG F I H T S F H F I H R P V W T P P I P R S Y I L H F I S F I G Q C G H H L Y L G I H T Y F I S F H S - A S V D T T Y T - . . . . . . 81009 ATGTAGTTTAAGACTCTCATTGGGTTTGCTGTGCAATGATCAGGAATAACCTAACGTCAT M - F K T L I G F A V Q - S G I T - R H C S L R L S L G L L C N D Q E - P N V I D V V - D S H W V C C A M I R N N L T S . . . . . . 81069 TACCTGAGTCTAGATCACCTCTTGATTATCATATCCTAACAGCTTCGGTATCATTAATTT Y L S L D H L L I I I S - Q L R Y H - F T - V - I T S - L S Y P N S F G I I N F L P E S R S P L D Y H I L T A S V S L I . 81129 CTTTAT L Y F S L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-5 (-strand): . . . . . . 81134 ATAAAGAAATTAATGATACCGAAGCTGTTAGGATATGATAATCAAGAGGTGATCTAGACT I K K L M I P K L L G Y D N Q E V I - T - R N - - Y R S C - D M I I K R - S R L K E I N D T E A V R I - - S R G D L D . . . . . . 81074 CAGGTAATGACGTTAGGTTATTCCTGATCATTGCACAGCAAACCCAATGAGAGTCTTAAA Q V M T L G Y S - S L H S K P N E S L K R - - R - V I P D H C T A N P M R V L N S G N D V R L F L I I A Q Q T Q - E S - . . . . . . 81014 CTACATCCTAGGTATAGGTGGTGTCCACACTGGCCTATGAATGAAATGAAATGAAGTATG L H P R Y R W C P H W P M N E M K - S M Y I L G I G G V H T G L - M K - N E V C T T S - V - V V S T L A Y E - N E M K Y . . . . . . 80954 TATGAATGGATGAAGCAGACTCTATGTTTTCTAATGAAGACTCCCTAGTTTAGGTCACAT Y E W M K Q T L C F L M K T P - F R S H M N G - S R L Y V F - - R L P S L G H I V - M D E A D S M F S N E D S L V - V T . . . . . . 80894 ATGTTGAGCCCTCATTTTGAAACGTCTAAATACCAAGTCCATGATGACAAGGTCTCATGA M L S P H F E T S K Y Q V H D D K V S - C - A L I L K R L N T K S M M T R S H D Y V E P S F - N V - I P S P - - Q G L M . . . . . . 80834 CATATGAATGAATAATATGAAAGAAGTTATGTGTTATATGTTATGTGCTATGATATGTAT H M N E - Y E R S Y V L Y V M C Y D M Y I - M N N M K E V M C Y M L C A M I C I T Y E - I I - K K L C V I C Y V L - Y V . . . . . . 80774 AAAGATGTTATGTGTTGTGTGCAATACGATTATTATAATGATGCATGTTACTCTCATGGC K D V M C C V Q Y D Y Y N D A C Y S H G K M L C V V C N T I I I M M H V T L M A - R C Y V L C A I R L L - - C M L L S W . . . . . . 80714 ATAACCTTCCTAACTCAATTTGGAAAGTTCACTAACTTTCGTAACCTCAATTTAGCATGT I T F L T Q F G K F T N F R N L N L A C - P S - L N L E S S L T F V T S I - H V H N L P N S I W K V H - L S - P Q F S M . . . . . . 80654 CCACTGACTTAACCTTCCATAAATCATGTTTTTAGGAAAGAGTTATTCCTTGTTATGCAT P L T - P S I N H V F R K E L F L V M H H - L N L P - I M F L G K S Y S L L C M S T D L T F H K S C F - E R V I P C Y A . . . . . . 80594 GTGCTTGGTGTGTTCTTGAAGATACGCATACTTAGTACAAGTGTTAGTTCCATACAAATA V L G V F L K I R I L S T S V S S I Q I C L V C S - R Y A Y L V Q V L V P Y K Y C A W C V L E D T H T - Y K C - F H T N . . . . . . 80534 TCTACTTTTAGGTGCAGGCACAGGTGGGCGTAGAGCTATAGGTTCGTTGTTGCTGCTATC S T F R C R H R W A - S Y R F V V A A I L L L G A G T G G R R A I G S L L L L S I Y F - V Q A Q V G V E L - V R C C C Y . . . . . . 80474 CGGACGTCAGCATTCATTCGGAGTTTGGTAGGTCCTCGTGCTTTTGAGGATGCTACTGTA R T S A F I R S L V G P R A F E D A T V G R Q H S F G V W - V L V L L R M L L Y P D V S I H S E F G R S S C F - G C Y C . . . . . . 80414 TTACATTCTTGCGTAGTTTTTGAATTGAGCTAGCGAAGCATGTTCCACTAGCGTTTCTTT L H S C V V F E L S - R S M F H - R F F Y I L A - F L N - A S E A C S T S V S F I T F L R S F - I E L A K H V P L A F L . 80354 CCTGTT P V L S C Maximal non-overlapping open reading frames (>= 64 codons): none PGL 9 (+ strand): 82631 83181 AGS-1 (82631 83181) SCR (e 0.860) Exon 1 82631 83181 ( 551 n); score: 0.860 PGS (82631 83181) SGN-U330716+ 3-phase translation of AGS-1 (+strand): . . . . . . 82631 AGGTAGTGGGTTTGATGCCCACTCTTCACATTTTATTTTCTCCTTTATTTTCCTCCTAAC R - W V - C P L F T F Y F L L Y F P P N G S G F D A H S S H F I F S F I F L L T V V G L M P T L H I L F S P L F S S - . . . . . . 82691 TCTCTCATCCATTCAAGAGGTTGTGGGTTTGATCCCCACTTTCCACATTTTATTTTTACT S L I H S R G C G F D P H F P H F I F T L S S I Q E V V G L I P T F H I L F L L L S H P F K R L W V - S P L S T F Y F Y . . . . . . 82751 TCTTTATTTTCGTGATTTTTAACATGTTGAGGTAACGGGTTCAATCCTCCATTACCTCAC S L F S - F L T C - G N G F N P P L P H L Y F R D F - H V E V T G S I L H Y L T F F I F V I F N M L R - R V Q S S I T S . . . . . . 82811 TTGTTTTAATTTATTTTTTTTCAATATTTTGAACCCTCTTTGCTGACAAAAATTCATCAA L F - F I F F Q Y F E P S L L T K I H Q C F N L F F F N I L N P L C - Q K F I N L V L I Y F F S I F - T L F A D K N S S . . . . . . 82871 TAGAAACTGGAAATTTTCTTTTAATTTTTCAGCATCCTTTTATCAAGTTACACCTTGGTT - K L E I F F - F F S I L L S S Y T L V R N W K F S F N F S A S F Y Q V T P W F I E T G N F L L I F Q H P F I K L H L G . . . . . . 82931 CATAGGGGAATTTTGTAGTGCATTTAGAACGTTTTAGGTGTGTCTTCATGTATTCATTTA H R G I L - C I - N V L G V S S C I H L I G E F C S A F R T F - V C L H V F I - S - G N F V V H L E R F R C V F M Y S F . . . . . . 82991 GCCAAGATATTATCCCTCAAATCAGCCACATTTCAACTATATAAACATCACATTTATATC A K I L S L K S A T F Q L Y K H H I Y I P R Y Y P S N Q P H F N Y I N I T F I S S Q D I I P Q I S H I S T I - T S H L Y . . . . . . 83051 AACATGTGTATACATGTGTAGATGAAATATATAGAACTATCATGCCATTTCAACTCCTAA N M C I H V - M K Y I E L S C H F N S - T C V Y M C R - N I - N Y H A I S T P K Q H V Y T C V D E I Y R T I M P F Q L L . . . . . . 83111 ACCATGAACAATACCCACGACAATAGACACATACACACGTAGTTACATTTTCAGAAATAT T M N N T H D N R H I H T - L H F Q K Y P - T I P T T I D T Y T R S Y I F R N I N H E Q Y P R Q - T H T H V V T F S E I . . 83171 CAACATAAGTC Q H K N I S S T - V Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 83181 GACTTATGTTGATATTTCTGAAAATGTAACTACGTGTGTATGTGTCTATTGTCGTGGGTA D L C - Y F - K C N Y V C M C L L S W V T Y V D I S E N V T T C V C V Y C R G Y L M L I F L K M - L R V Y V S I V V G . . . . . . 83121 TTGTTCATGGTTTAGGAGTTGAAATGGCATGATAGTTCTATATATTTCATCTACACATGT L F M V - E L K W H D S S I Y F I Y T C C S W F R S - N G M I V L Y I S S T H V I V H G L G V E M A - - F Y I F H L H M . . . . . . 83061 ATACACATGTTGATATAAATGTGATGTTTATATAGTTGAAATGTGGCTGATTTGAGGGAT I H M L I - M - C L Y S - N V A D L R D Y T C - Y K C D V Y I V E M W L I - G I Y T H V D I N V M F I - L K C G - F E G . . . . . . 83001 AATATCTTGGCTAAATGAATACATGAAGACACACCTAAAACGTTCTAAATGCACTACAAA N I L A K - I H E D T P K T F - M H Y K I S W L N E Y M K T H L K R S K C T T K - Y L G - M N T - R H T - N V L N A L Q . . . . . . 82941 ATTCCCCTATGAACCAAGGTGTAACTTGATAAAAGGATGCTGAAAAATTAAAAGAAAATT I P L - T K V - L D K R M L K N - K K I F P Y E P R C N L I K G C - K I K R K F N S P M N Q G V T - - K D A E K L K E N . . . . . . 82881 TCCAGTTTCTATTGATGAATTTTTGTCAGCAAAGAGGGTTCAAAATATTGAAAAAAAATA S S F Y - - I F V S K E G S K Y - K K I P V S I D E F L S A K R V Q N I E K K - F Q F L L M N F C Q Q R G F K I L K K N . . . . . . 82821 AATTAAAACAAGTGAGGTAATGGAGGATTGAACCCGTTACCTCAACATGTTAAAAATCAC N - N K - G N G G L N P L P Q H V K N H I K T S E V M E D - T R Y L N M L K I T K L K Q V R - W R I E P V T S T C - K S . . . . . . 82761 GAAAATAAAGAAGTAAAAATAAAATGTGGAAAGTGGGGATCAAACCCACAACCTCTTGAA E N K E V K I K C G K W G S N P Q P L E K I K K - K - N V E S G D Q T H N L L N R K - R S K N K M W K V G I K P T T S - . . . . . . 82701 TGGATGAGAGAGTTAGGAGGAAAATAAAGGAGAAAATAAAATGTGAAGAGTGGGCATCAA W M R E L G G K - R R K - N V K S G H Q G - E S - E E N K G E N K M - R V G I K M D E R V R R K I K E K I K C E E W A S . . 82641 ACCCACTACCT T H Y P T T N P L P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 10 (- strand): 84754 83846 AGS-1 (84754 84368,84263 83846) SCR (e 0.743 d 0.000 a 0.000,e 0.837) Exon 1 84754 84368 ( 387 n); score: 0.743 Intron 1 84367 84264 ( 104 n); Pd: 0.000 Pa: 0.000 Exon 2 84263 83846 ( 418 n); score: 0.837 PGS (84754 84368,84263 83846) SGN-U345876- 3-phase translation of AGS-1 (-strand): . . . . . . 84754 GGGCAGGCAAGGCGCAGCATGCATACATTGGAGGACATGTTGAGAGCGTGTGTAATTGGC G Q A R R S M H T L E D M L R A C V I G G R Q G A A C I H W R T C - E R V - L A A G K A Q H A Y I G G H V E S V C N W . . . . . . 84694 TTCAGAGGTAACTGGGATGACCATCTGCCTTTAATAGAGTTATCGTATAATAATAGCTAT F R G N W D D H L P L I E L S Y N N S Y S E V T G M T I C L - - S Y R I I I A I L Q R - L G - P S A F N R V I V - - - L . . . . . . 84634 CACTCCATCATTGGGATGGCACCTTTTGAGGCATTGTATGGTAGGAGGTGTAGATCTTCA H S I I G M A P F E A L Y G R R C R S S T P S L G W H L L R H C M V G G V D L Q S L H H W D G T F - G I V W - E V - I F . . . . . . 84574 GTTGGGTGGTTCGAGGTTGGAGAGTCATCCATTTTAGGTCTGGAGATAATTCATAAAGAC V G W F E V G E S S I L G L E I I H K D L G G S R L E S H P F - V W R - F I K T S W V V R G W R V I H F R S G D N S - R . . . . . . 84514 GTGGAGAAAGTTAGAGTGATTAGGGACAAGTTGGCTACTGCTTACAGCCGACAGAAATCA V E K V R V I R D K L A T A Y S R Q K S W R K L E - L G T S W L L L T A D R N H R G E S - S D - G Q V G Y C L Q P T E I . . . . . . 84454 TATCCAGATAACAGAAAGTGGCCCTTAGAAATTAATGTTTGTGACCTGGCTTACTTGAAG Y P D N R K W P L E I N V C D L A Y L K I Q I T E S G P - K L M F V T W L T - R I S R - Q K V A L R N - C L - P G L L E . . . : . . . 84394 ATATCTCCTATGAAAGGGGTGATGAGA : TTCTGTTCATCCAGTCTTTCATGTCTCTATGTT I S P M K G V M R : F C S S S L S C L Y V Y L L - K G - - D : S V H P V F H V S M L D I S Y E R G D E : I L F I Q S F M S L C . . . . . . 84230 GAAGAAGTGCCTAGGTGATCCAACATCAATGCTACCTATTGAAGGTTAGGGGGTTGGTGA E E V P R - S N I N A T Y - R L G G W - K K C L G D P T S M L P I E G - G V G E - R S A - V I Q H Q C Y L L K V R G L V . . . . . . 84170 AGACTTGTCTTATGAGGATGTACTTGTTGAGATCTTAGACAGACAGGTCAAAAGGCTGAG R L V L - G C T C - D L R Q T G Q K A E D L S Y E D V L V E I L D R Q V K R L R K T C L M R M Y L L R S - T D R S K G - . . . . . . 84110 GAACAAGAAGATTGCCACAGTGAATGTATTGTGGAGAAATCATCTTGTTGAGGGTGCTAT E Q E D C H S E C I V E K S S C - G C Y N K K I A T V N V L W R N H L V E G A M G T R R L P Q - M Y C G E I I L L R V L . . . . . . 84050 GTGGGAGGCTGAGGCCGACATGAGATCCTGTTATCCTCATCTTTTCAGCTCTTGAGGTTA V G G - G R H E I L L S S S F Q L L R L W E A E A D M R S C Y P H L F S S - G - C G R L R P T - D P V I L I F S A L E V . . . . . . 83990 GACTTCCTACTCGTAAGGCTATAGTTACTTATCTCTTGGTATTTTGTTGCTATTGGCAGA D F L L V R L - L L I S W Y F V A I G R T S Y S - G Y S Y L S L G I L L L L A D R L P T R K A I V T Y L L V F C C Y W Q . . . . . . 83930 CTGTACATGGCGATTAAGTTATGATCTGATTGACATTTTGATGTGTAATAGTAGTGTCAT L Y M A I K L - S D - H F D V - - - C H C T W R L S Y D L I D I L M C N S S V I T V H G D - V M I - L T F - C V I V V S . . . 83870 TCGGGGACGAATGTTCCTAAGGGGG S G T N V P K G R G R M F L R G F G D E C S - G Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-10_AGS-1_PPS_1 (84754 84368,84263 84213) (frame '1'; 435 bp, 145 residues) 1 GQARRSMHTL EDMLRACVIG FRGNWDDHLP LIELSYNNSY HSIIGMAPFE ALYGRRCRSS 61 VGWFEVGESS ILGLEIIHKD VEKVRVIRDK LATAYSRQKS YPDNRKWPLE INVCDLAYLK 121 ISPMKGVMRF CSSSLSCLYV EEVPR- PGL 11 (+ strand): 91369 91848 AGS-1 (91369 91848) SCR (e 0.916) Exon 1 91369 91848 ( 480 n); score: 0.916 PGS (91369 91848) SGN-U330716+ 3-phase translation of AGS-1 (+strand): . . . . . . 91369 TTCCTCCTTACTCTCTCATCCATTCAAGAGGTTGTGGGTTCAATCCCCACTTTCCACATT F L L T L S S I Q E V V G S I P T F H I S S L L S H P F K R L W V Q S P L S T F P P Y S L I H S R G C G F N P H F P H . . . . . . 91429 TTATATTTACTTCTTTATTTTCATGGTTTTTAACATGGTGAAGTCACGGGTTCAATCCTG L Y L L L Y F H G F - H G E V T G S I L Y I Y F F I F M V F N M V K S R V Q S C F I F T S L F S W F L T W - S H G F N P . . . . . . 91489 CATGACCTCACTTGTTTTAATGTAAATTTTTTCAACATTTTGAACCCTCTTTGCTGACCA H D L T C F N V N F F N I L N P L C - P M T S L V L M - I F S T F - T L F A D Q A - P H L F - C K F F Q H F E P S L L T . . . . . . 91549 AAATTCATCAATAGAAGCTGGAAATTTTCTTTTAATTTTTCAGCATCCTTTCATCAAGTT K F I N R S W K F S F N F S A S F H Q V N S S I E A G N F L L I F Q H P F I K L K I H Q - K L E I F F - F F S I L S S S . . . . . . 91609 ACACCTTAGTTCTTAGGGGAATTTCGTAGTGCATTTAGAACGTTTTAGGTGTGTCTTCAT T P - F L G E F R S A F R T F - V C L H H L S S - G N F V V H L E R F R C V F M Y T L V L R G I S - C I - N V L G V S S . . . . . . 91669 GTATTCGTTTAGCCAAGACATTATCCATCAAATCAGCCACATTTCAACTCATATGAACAT V F V - P R H Y P S N Q P H F N S Y E H Y S F S Q D I I H Q I S H I S T H M N I C I R L A K T L S I K S A T F Q L I - T . . . . . . 91729 CACATTTACATCAACATGTGTATATGAAATATAAAGAACTATCATGCCATTTCAACTCCT H I Y I N M C I - N I K N Y H A I S T P T F T S T C V Y E I - R T I M P F Q L L S H L H Q H V Y M K Y K E L S C H F N S . . . . . . 91789 AAACCATGAACAATATCCACGGCAACAGACACATACACACGTAGTTACATTTTCGGAAAC K P - T I S T A T D T Y T R S Y I F G N N H E Q Y P R Q Q T H T H V V T F S E - T M N N I H G N R H I H T - L H F R K Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 91848 GTTTCCGAAAATGTAACTACGTGTGTATGTGTCTGTTGCCGTGGATATTGTTCATGGTTT V S E N V T T C V C V C C R G Y C S W F F P K M - L R V Y V S V A V D I V H G L F R K C N Y V C M C L L P W I L F M V . . . . . . 91788 AGGAGTTGAAATGGCATGATAGTTCTTTATATTTCATATACACATGTTGATGTAAATGTG R S - N G M I V L Y I S Y T H V D V N V G V E M A - - F F I F H I H M L M - M - - E L K W H D S S L Y F I Y T C - C K C . . . . . . 91728 ATGTTCATATGAGTTGAAATGTGGCTGATTTGATGGATAATGTCTTGGCTAAACGAATAC M F I - V E M W L I - W I M S W L N E Y C S Y E L K C G - F D G - C L G - T N T D V H M S - N V A D L M D N V L A K R I . . . . . . 91668 ATGAAGACACACCTAAAACGTTCTAAATGCACTACGAAATTCCCCTAAGAACTAAGGTGT M K T H L K R S K C T T K F P - E L R C - R H T - N V L N A L R N S P K N - G V H E D T P K T F - M H Y E I P L R T K V . . . . . . 91608 AACTTGATGAAAGGATGCTGAAAAATTAAAAGAAAATTTCCAGCTTCTATTGATGAATTT N L M K G C - K I K R K F P A S I D E F T - - K D A E K L K E N F Q L L L M N F - L D E R M L K N - K K I S S F Y - - I . . . . . . 91548 TGGTCAGCAAAGAGGGTTCAAAATGTTGAAAAAATTTACATTAAAACAAGTGAGGTCATG W S A K R V Q N V E K I Y I K T S E V M G Q Q R G F K M L K K F T L K Q V R S C L V S K E G S K C - K N L H - N K - G H . . . . . . 91488 CAGGATTGAACCCGTGACTTCACCATGTTAAAAACCATGAAAATAAAGAAGTAAATATAA Q D - T R D F T M L K T M K I K K - I - R I E P V T S P C - K P - K - R S K Y K A G L N P - L H H V K N H E N K E V N I . . . . . . 91428 AATGTGGAAAGTGGGGATTGAACCCACAACCTCTTGAATGGATGAGAGAGTAAGGAGGAA N V E S G D - T H N L L N G - E S K E E M W K V G I E P T T S - M D E R V R R K C G K W G L N P Q P L E W M R E - G G Maximal non-overlapping open reading frames (>= 64 codons): none PGL 12 (+ strand): 108056 109889 AGS-1 (108056 109889) SCR (e 0.989) Exon 1 108056 109889 (1834 n); score: 0.989 PGS (108056 109889) SGN-U312517+ PGS (108114 108958) SGN-U333615+ PGS (108162 108916) SGN-U333614+ 3-phase translation of AGS-1 (+strand): . . . . . . 108056 ATAAACACAGCCTTCAATAAAACCCCTCTGAGTTCTTCACTTACAAGAAGAACCATAGGG I N T A F N K T P L S S S L T R R T I G - T Q P S I K P L - V L H L Q E E P - G K H S L Q - N P S E F F T Y K K N H R . . . . . . 108116 GTTGTTTCATAGGGAACTCCCCCCATAAAAAAAATCCAAAAAAATCAAAAAACCAAAAAA V V S - G T P P I K K I Q K N Q K T K K L F H R E L P P - K K S K K I K K P K K G C F I G N S P H K K N P K K S K N Q K . . . . . . 108176 ATGACAAAGAAGGTGGTAATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGTG M T K K V V I G G I A S V L V V A C V V - Q R R W - L V E - L L F L W W L V W W N D K E G G N W W N S F C S C G G L C G . . . . . . 108236 GCAGCCTGTGTCACCCTGACTAAACATGATTCTGATACTTCATCAAATGGAGTTGCAACT A A C V T L T K H D S D T S S N G V A T Q P V S P - L N M I L I L H Q M E L Q L G S L C H P D - T - F - Y F I K W S C N . . . . . . 108296 TCAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAAG S T K S V E S M C Q P T P Y K Q T C E K Q Q S Q L N L C V N P H H T N K L V K R F N K V S - I Y V S T H T I Q T N L - K . . . . . . 108356 ACCCTCTCCGCAGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGAA T L S A A K N V S D P K D Y I K V A F E P S P Q Q R M C P I Q R T T S R L H S K D P L R S K E C V R S K G L H Q G C I R . . . . . . 108416 GCCACTGTGGCAGACATCAAGAATGCCATCAAGAACACTGAGCCAGTTAAGAAAGCTGCT A T V A D I K N A I K N T E P V K K A A P L W Q T S R M P S R T L S Q L R K L L S H C G R H Q E C H Q E H - A S - E S C . . . . . . 108476 AGTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGGTGTTTGATCTAGCCGTT S D P Y T K D A L L A C E E V F D L A V V I L T P K T L S L L V K R C L I - P L - - S L H Q R R S P C L - R G V - S S R . . . . . . 108536 GAGGAACTAAGGGGCTCTATCGCTAGGATTGAGAACTTTGATTTCTCTAAGATGAAGGAT E E L R G S I A R I E N F D F S K M K D R N - G A L S L G L R T L I S L R - R I - G T K G L Y R - D - E L - F L - D E G . . . . . . 108596 ATAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTCGTTGCTTATGAAGAGACTTGTTTA I V D D L K S W L S A V V A Y E E T C L - W M T S S H G L A L S L L M K R L V - Y S G - P Q V M A - R C R C L - R D L F . . . . . . 108656 GATGGTTTCACCAAATCAGAATACAGTGCAACCCGTGACGAAATGATGAAGCTAATGAGC D G F T K S E Y S A T R D E M M K L M S M V S P N Q N T V Q P V T K - - S - - A R W F H Q I R I Q C N P - R N D E A N E . . . . . . 108716 ACCACTCGGGAGCTGAGTAGCAATGCTCTTTCCATGGTCAACAGCTTCGGTGAAATGATC T T R E L S S N A L S M V N S F G E M I P L G S - V A M L F P W S T A S V K - S H H S G A E - Q C S F H G Q Q L R - N D . . . . . . 108776 ACACAAAACACAGGCCTTACCCGCAAATTGTTATCAAACAGTGACTCATTTGTCGAAGCC T Q N T G L T R K L L S N S D S F V E A H K T Q A L P A N C Y Q T V T H L S K P H T K H R P Y P Q I V I K Q - L I C R S . . . . . . 108836 AGTAATCGTAAGCTCCTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTGCCAGT S N R K L L Q I S A S K P N A V V S A S V I V S S F K F L P P S L M L W F L P V Q - S - A P S N F C L Q A - C C G F C Q . . . . . . 108896 GGAGGCGGACAATACAAGACCATTCAGGAAGCACTTCAAGCTGTCCCCAAGAGTAGTCCA G G G Q Y K T I Q E A L Q A V P K S S P E A D N T R P F R K H F K L S P R V V Q W R R T I Q D H S G S T S S C P Q E - S . . . . . . 108956 ACTCCTTTCGTTATCCTGATCAAGGCGGGTACATACAAGGAACACATTCAAATCGAAAAG T P F V I L I K A G T Y K E H I Q I E K L L S L S - S R R V H T R N T F K S K R N S F R Y P D Q G G Y I Q G T H S N R K . . . . . . 109016 AACATGCTAAATGTTGTGCTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGAC N M L N V V L I G E G P T K T I I T G D T C - M L C L L V K A Q P R P - S P V T E H A K C C A Y W - R P N Q D H N H R - . . . . . . 109076 CAGGCAGTAGTTCCTAACCGTATATCAACATGGCATACAGCCACCCTTGGTGTTTGTGGT Q A V V P N R I S T W H T A T L G V C G R Q - F L T V Y Q H G I Q P P L V F V V P G S S S - P Y I N M A Y S H P W C L W . . . . . . 109136 GATGGTTTCGTTATGAAGGACATGGGTATTGAAAACACAGCAGGACCCACAAAAGAACAA D G F V M K D M G I E N T A G P T K E Q M V S L - R T W V L K T Q Q D P Q K N K - W F R Y E G H G Y - K H S R T H K R T . . . . . . 109196 GCCGTTGCATTGAGAATTAATGCTGATAAGGCTGTTCTCTACAACTGCAATATCGATGGT A V A L R I N A D K A V L Y N C N I D G P L H - E L M L I R L F S T T A I S M V S R C I E N - C - - G C S L Q L Q Y R W . . . . . . 109256 TACCAAGACACGTTATATGCTCACTCAGGAAGACAATTTTATCGTGATTGTACCATTACA Y Q D T L Y A H S G R Q F Y R D C T I T T K T R Y M L T Q E D N F I V I V P L Q L P R H V I C S L R K T I L S - L Y H Y . . . . . . 109316 GGCACCATTGATTTCTTGTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGATT G T I D F L F G D A S A V F Q N C K L I A P L I S C L V M Q V L F S K T A N - L R H H - F L V W - C K C C F P K L Q I D . . . . . . 109376 GTGAGGAAACCAGGTCCTAATCAAGCTTGCATGATCACTGCTCAAGGAAGGATGAGAAAA V R K P G P N Q A C M I T A Q G R M R K - G N Q V L I K L A - S L L K E G - E K C E E T R S - S S L H D H C S R K D E K . . . . . . 109436 GATTCCTTAGGTGGATTCGTTATCCAAAATTGTGACATCAAGGCTGATAAAGCACTCACT D S L G G F V I Q N C D I K A D K A L T I P - V D S L S K I V T S R L I K H S L R F L R W I R Y P K L - H Q G - - S T H . . . . . . 109496 AGCGCCAATCCACCAGTCAAAGTCTATCTTGGACGTCCATGGAAGGAGTTTTCCAAGACC S A N P P V K V Y L G R P W K E F S K T A P I H Q S K S I L D V H G R S F P R P - R Q S T S Q S L S W T S M E G V F Q D . . . . . . 109556 ATCATAATGCAATCAAACATCGATGGATTCGTCGATCCATCAGGATGGTCACCATGGAAC I I M Q S N I D G F V D P S G W S P W N S - C N Q T S M D S S I H Q D G H H G T H H N A I K H R W I R R S I R M V T M E . . . . . . 109616 ACAACTGATTTTGGAATACACACATGTTTTTATGCAGAGTATCAGAACAGAGGACCAGGT T T D F G I H T C F Y A E Y Q N R G P G Q L I L E Y T H V F M Q S I R T E D Q V H N - F W N T H M F L C R V S E Q R T R . . . . . . 109676 GCTGCACTTGACAAAAGAGTCTCCACATGGAGAGGTTACCAAAAGGATATTTCAGGAGAC A A L D K R V S T W R G Y Q K D I S G D L H L T K E S P H G E V T K R I F Q E T C C T - Q K S L H M E R L P K G Y F R R . . . . . . 109736 GTTATTAACAGCTTCACTGCCGGTAAATTCATTAATACACAACAGCCATGGTTACCAATG V I N S F T A G K F I N T Q Q P W L P M L L T A S L P V N S L I H N S H G Y Q C R Y - Q L H C R - I H - Y T T A M V T N . . . . . . 109796 TTTGATATTCCCTATGAAGCTGGCATGATGAAGGTGTAATTACATATACCATTCATCCTG F D I P Y E A G M M K V - L H I P F I L L I F P M K L A - - R C N Y I Y H S S C V - Y S L - S W H D E G V I T Y T I H P . . . . 109856 TAATTTTTTCTAATTATTCAAAATTATATTTCCT - F F L I I Q N Y I S N F F - L F K I I F P V I F S N Y S K L Y F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-12_AGS-1_PPS_1 (108128 109834) (frame '1'; 1704 bp, 568 residues) 1 GTPPIKKIQK NQKTKKMTKK VVIGGIASVL VVACVVAACV TLTKHDSDTS SNGVATSTKS 61 VESMCQPTPY KQTCEKTLSA AKNVSDPKDY IKVAFEATVA DIKNAIKNTE PVKKAASDPY 121 TKDALLACEE VFDLAVEELR GSIARIENFD FSKMKDIVDD LKSWLSAVVA YEETCLDGFT 181 KSEYSATRDE MMKLMSTTRE LSSNALSMVN SFGEMITQNT GLTRKLLSNS DSFVEASNRK 241 LLQISASKPN AVVSASGGGQ YKTIQEALQA VPKSSPTPFV ILIKAGTYKE HIQIEKNMLN 301 VVLIGEGPTK TIITGDQAVV PNRISTWHTA TLGVCGDGFV MKDMGIENTA GPTKEQAVAL 361 RINADKAVLY NCNIDGYQDT LYAHSGRQFY RDCTITGTID FLFGDASAVF QNCKLIVRKP 421 GPNQACMITA QGRMRKDSLG GFVIQNCDIK ADKALTSANP PVKVYLGRPW KEFSKTIIMQ 481 SNIDGFVDPS GWSPWNTTDF GIHTCFYAEY QNRGPGAALD KRVSTWRGYQ KDISGDVINS 541 FTAGKFINTQ QPWLPMFDIP YEAGMMKV- 3-phase translation of AGS-1 (-strand): . . . . . . 109889 AGGAAATATAATTTTGAATAATTAGAAAAAATTACAGGATGAATGGTATATGTAATTACA R K Y N F E - L E K I T G - M V Y V I T G N I I L N N - K K L Q D E W Y M - L H E I - F - I I R K N Y R M N G I C N Y . . . . . . 109829 CCTTCATCATGCCAGCTTCATAGGGAATATCAAACATTGGTAACCATGGCTGTTGTGTAT P S S C Q L H R E Y Q T L V T M A V V Y L H H A S F I G N I K H W - P W L L C I T F I M P A S - G I S N I G N H G C C V . . . . . . 109769 TAATGAATTTACCGGCAGTGAAGCTGTTAATAACGTCTCCTGAAATATCCTTTTGGTAAC - - I Y R Q - S C - - R L L K Y P F G N N E F T G S E A V N N V S - N I L L V T L M N L P A V K L L I T S P E I S F W - . . . . . . 109709 CTCTCCATGTGGAGACTCTTTTGTCAAGTGCAGCACCTGGTCCTCTGTTCTGATACTCTG L S M W R L F C Q V Q H L V L C S D T L S P C G D S F V K C S T W S S V L I L C P L H V E T L L S S A A P G P L F - Y S . . . . . . 109649 CATAAAAACATGTGTGTATTCCAAAATCAGTTGTGTTCCATGGTGACCATCCTGATGGAT H K N M C V F Q N Q L C S M V T I L M D I K T C V Y S K I S C V P W - P S - W I A - K H V C I P K S V V F H G D H P D G . . . . . . 109589 CGACGAATCCATCGATGTTTGATTGCATTATGATGGTCTTGGAAAACTCCTTCCATGGAC R R I H R C L I A L - W S W K T P S M D D E S I D V - L H Y D G L G K L L P W T S T N P S M F D C I M M V L E N S F H G . . . . . . 109529 GTCCAAGATAGACTTTGACTGGTGGATTGGCGCTAGTGAGTGCTTTATCAGCCTTGATGT V Q D R L - L V D W R - - V L Y Q P - C S K I D F D W W I G A S E C F I S L D V R P R - T L T G G L A L V S A L S A L M . . . . . . 109469 CACAATTTTGGATAACGAATCCACCTAAGGAATCTTTTCTCATCCTTCCTTGAGCAGTGA H N F G - R I H L R N L F S S F L E Q - T I L D N E S T - G I F S H P S L S S D S Q F W I T N P P K E S F L I L P - A V . . . . . . 109409 TCATGCAAGCTTGATTAGGACCTGGTTTCCTCACAATCAATTTGCAGTTTTGGAAAACAG S C K L D - D L V S S Q S I C S F G K Q H A S L I R T W F P H N Q F A V L E N S I M Q A - L G P G F L T I N L Q F W K T . . . . . . 109349 CACTTGCATCACCAAACAAGAAATCAATGGTGCCTGTAATGGTACAATCACGATAAAATT H L H H Q T R N Q W C L - W Y N H D K I T C I T K Q E I N G A C N G T I T I K L A L A S P N K K S M V P V M V Q S R - N . . . . . . 109289 GTCTTCCTGAGTGAGCATATAACGTGTCTTGGTAACCATCGATATTGCAGTTGTAGAGAA V F L S E H I T C L G N H R Y C S C R E S S - V S I - R V L V T I D I A V V E N C L P E - A Y N V S W - P S I L Q L - R . . . . . . 109229 CAGCCTTATCAGCATTAATTCTCAATGCAACGGCTTGTTCTTTTGTGGGTCCTGCTGTGT Q P Y Q H - F S M Q R L V L L W V L L C S L I S I N S Q C N G L F F C G S C C V T A L S A L I L N A T A C S F V G P A V . . . . . . 109169 TTTCAATACCCATGTCCTTCATAACGAAACCATCACCACAAACACCAAGGGTGGCTGTAT F Q Y P C P S - R N H H H K H Q G W L Y F N T H V L H N E T I T T N T K G G C M F S I P M S F I T K P S P Q T P R V A V . . . . . . 109109 GCCATGTTGATATACGGTTAGGAACTACTGCCTGGTCACCGGTGATTATGGTCTTGGTTG A M L I Y G - E L L P G H R - L W S W L P C - Y T V R N Y C L V T G D Y G L G W C H V D I R L G T T A W S P V I M V L V . . . . . . 109049 GGCCTTCACCAATAAGCACAACATTTAGCATGTTCTTTTCGATTTGAATGTGTTCCTTGT G L H Q - A Q H L A C S F R F E C V P C A F T N K H N I - H V L F D L N V F L V G P S P I S T T F S M F F S I - M C S L . . . . . . 108989 ATGTACCCGCCTTGATCAGGATAACGAAAGGAGTTGGACTACTCTTGGGGACAGCTTGAA M Y P P - S G - R K E L D Y S W G Q L E C T R L D Q D N E R S W T T L G D S L K Y V P A L I R I T K G V G L L L G T A - . . . . . . 108929 GTGCTTCCTGAATGGTCTTGTATTGTCCGCCTCCACTGGCAGAAACCACAGCATTAGGCT V L P E W S C I V R L H W Q K P Q H - A C F L N G L V L S A S T G R N H S I R L S A S - M V L Y C P P P L A E T T A L G . . . . . . 108869 TGGAGGCAGAAATTTGAAGGAGCTTACGATTACTGGCTTCGACAAATGAGTCACTGTTTG W R Q K F E G A Y D Y W L R Q M S H C L G G R N L K E L T I T G F D K - V T V - L E A E I - R S L R L L A S T N E S L F . . . . . . 108809 ATAACAATTTGCGGGTAAGGCCTGTGTTTTGTGTGATCATTTCACCGAAGCTGTTGACCA I T I C G - G L C F V - S F H R S C - P - Q F A G K A C V L C D H F T E A V D H D N N L R V R P V F C V I I S P K L L T . . . . . . 108749 TGGAAAGAGCATTGCTACTCAGCTCCCGAGTGGTGCTCATTAGCTTCATCATTTCGTCAC W K E H C Y S A P E W C S L A S S F R H G K S I A T Q L P S G A H - L H H F V T M E R A L L L S S R V V L I S F I I S S . . . . . . 108689 GGGTTGCACTGTATTCTGATTTGGTGAAACCATCTAAACAAGTCTCTTCATAAGCAACGA G L H C I L I W - N H L N K S L H K Q R G C T V F - F G E T I - T S L F I S N D R V A L Y S D L V K P S K Q V S S - A T . . . . . . 108629 CAGCGCTAAGCCATGACTTGAGGTCATCCACTATATCCTTCATCTTAGAGAAATCAAAGT Q R - A M T - G H P L Y P S S - R N Q S S A K P - L E V I H Y I L H L R E I K V T A L S H D L R S S T I S F I L E K S K . . . . . . 108569 TCTCAATCCTAGCGATAGAGCCCCTTAGTTCCTCAACGGCTAGATCAAACACCTCTTCAC S Q S - R - S P L V P Q R L D Q T P L H L N P S D R A P - F L N G - I K H L F T F S I L A I E P L S S S T A R S N T S S . . . . . . 108509 AAGCAAGGAGAGCGTCTTTGGTGTAAGGATCACTAGCAGCTTTCTTAACTGGCTCAGTGT K Q G E R L W C K D H - Q L S - L A Q C S K E S V F G V R I T S S F L N W L S V Q A R R A S L V - G S L A A F L T G S V . . . . . . 108449 TCTTGATGGCATTCTTGATGTCTGCCACAGTGGCTTCGAATGCAACCTTGATGTAGTCCT S - W H S - C L P Q W L R M Q P - C S P L D G I L D V C H S G F E C N L D V V L F L M A F L M S A T V A S N A T L M - S . . . . . . 108389 TTGGATCGGACACATTCTTTGCTGCGGAGAGGGTCTTTTCACAAGTTTGTTTGTATGGTG L D R T H S L L R R G S F H K F V C M V W I G H I L C C G E G L F T S L F V W C F G S D T F F A A E R V F S Q V C L Y G . . . . . . 108329 TGGGTTGACACATAGATTCAACTGACTTTGTTGAAGTTGCAACTCCATTTGATGAAGTAT W V D T - I Q L T L L K L Q L H L M K Y G L T H R F N - L C - S C N S I - - S I V G - H I D S T D F V E V A T P F D E V . . . . . . 108269 CAGAATCATGTTTAGTCAGGGTGACACAGGCTGCCACCACACAAGCCACCACAAGAACAG Q N H V - S G - H R L P P H K P P Q E Q R I M F S Q G D T G C H H T S H H K N R S E S C L V R V T Q A A T T Q A T T R T . . . . . . 108209 AAGCTATTCCACCAATTACCACCTTCTTTGTCATTTTTTTGGTTTTTTGATTTTTTTGGA K L F H Q L P P S L S F F W F F D F F G S Y S T N Y H L L C H F F G F L I F L D E A I P P I T T F F V I F L V F - F F W . . . . . . 108149 TTTTTTTTATGGGGGGAGTTCCCTATGAAACAACCCCTATGGTTCTTCTTGTAAGTGAAG F F L W G E F P M K Q P L W F F L - V K F F Y G G S S L - N N P Y G S S C K - R I F F M G G V P Y E T T P M V L L V S E . . . . 108089 AACTCAGAGGGGTTTTATTGAAGGCTGTGTTTAT N S E G F Y - R L C L T Q R G F I E G C V Y E L R G V L L K A V F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-12_AGS-1_PPS_1 (109233 109003) (frame '0'; 228 bp, 76 residues) 1 RTALSALILN ATACSFVGPA VFSIPMSFIT KPSPQTPRVA VCHVDIRLGT TAWSPVIMVL 61 VGPSPISTTF SMFFSI- >C01HBa0163B20.1-_PGL-12_AGS-1_PPS_2 (108526 108305) (frame '2'; 219 bp, 73 residues) 1 IKHLFTSKES VFGVRITSSF LNWLSVLDGI LDVCHSGFEC NLDVVLWIGH ILCCGEGLFT 61 SLFVWCGLTH RFN- >C01HBa0163B20.1-_PGL-12_AGS-1_PPS_3 (108852 108637) (frame '0'; 213 bp, 71 residues) 1 RSLRLLASTN ESLFDNNLRV RPVFCVIISP KLLTMERALL LSSRVVLISF IISSRVALYS 61 DLVKPSKQVS S- >C01HBa0163B20.1-_PGL-12_AGS-1_PPS_4 (109021 108821) (frame '2'; 198 bp, 66 residues) 1 HVLFDLNVFL VCTRLDQDNE RSWTTLGDSL KCFLNGLVLS ASTGRNHSIR LGGRNLKELT 61 ITGFDK- PGL 13 (+ strand): 110856 116730 AGS-1 (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514,116426 116467) SCR (e 0.736 d 0.000 a 0.000,e 0.786 d 0.736 a 0.000,e 0.600 d 0.990 a 0.781,e 0.556 d 0.900 a 0.000,e 0.829 d 0.000 a 0.000,e 0.917) Exon 1 110856 110908 ( 53 n); score: 0.736 Intron 1 110909 111176 ( 268 n); Pd: 0.000 Pa: 0.000 Exon 2 111177 111190 ( 14 n); score: 0.786 Intron 2 111191 111564 ( 374 n); Pd: 0.736 Pa: 0.000 Exon 3 111565 111589 ( 25 n); score: 0.600 Intron 3 111590 111686 ( 97 n); Pd: 0.990 Pa: 0.781 Exon 4 111687 111695 ( 9 n); score: 0.556 Intron 4 111696 112059 ( 364 n); Pd: 0.900 Pa: 0.000 Exon 5 112060 112514 ( 455 n); score: 0.829 Intron 5 112515 116425 (3911 n); Pd: 0.000 Pa: 0.000 Exon 6 116426 116467 ( 42 n); score: 0.917 PGS (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514,116426 116461) SGN-U320104+ PGS (112311 112514,116426 116467) SGN-U337018+ 3-phase translation of AGS-1 (+strand): . . . . . . : 110856 ATCAGCAAAAAAAAAAAGTATATTTATACTTTTTATTATTAATAATGAATTCT : CCAAGCA I S K K K K Y I Y T F Y Y - - - I L : Q A S A K K K S I F I L F I I N N E F : S K H Q Q K K K V Y L Y F L L L I M N S : P S . : . . . : . : . 111184 TGAAAAT : TTTCCGAAACTTTTGGATGAGTTTC : CACTTCGAA : ATTTGTATTAATGTGTTAA - K : F S E T F G - V S : T S K : F V L M C - E N : F P K L L D E F : P L R : N L Y - C V K M K I : F R N F W M S F : H F E : I C I N V L . . . . . . 112079 ACTTGACAAGATTCAAAAATGGATTAATGATAAGATATGGTAGTTAGAAGGATAATTCTT T - Q D S K M D - - - D M V V R R I I L L D K I Q K W I N D K I W - L E G - F F N L T R F K N G L M I R Y G S - K D N S . . . . . . 112139 CATTGGTAGAAAAGTCAAGAAAGCACCTTTGTAGGTGAAATTTAGGTGAAACATAAATTG H W - K S Q E S T F V G E I - V K H K L I G R K V K K A P L - V K F R - N I N W S L V E K S R K H L C R - N L G E T - I . . . . . . 112199 GTTTCACGAGGTAAATCTTGACATATTTTGATGTCATGGATGACATTAATAGGAAGAATT V S R G K S - H I L M S W M T L I G R I F H E V N L D I F - C H G - H - - E E F G F T R - I L T Y F D V M D D I N R K N . . . . . . 112259 CACTCCTATGTAGGTAGCTCCTAATTCATTTGTAACACATCTTTACTTGCCTTCTCATCT H S Y V G S S - F I C N T S L L A F S S T P M - V A P N S F V T H L Y L P S H L S L L C R - L L I H L - H I F T C L L I . . . . . . 112319 CCTAATACATTTGTTCTTCTTCCCATCTTGTAGTATTTTACTTGTAATTTTTTGGAGTGA P N T F V L L P I L - Y F T C N F L E - L I H L F F F P S C S I L L V I F W S E S - Y I C S S S H L V V F Y L - F F G V . . . . . . 112379 AATAAATATTGGTTGGTTGTGTCCGAGGAGTAGGCAAAAGAAAATAAAATTTTACCGAAC N K Y W L V V S E E - A K E N K I L P N I N I G W L C P R S R Q K K I K F Y R T K - I L V G C V R G V G K R K - N F T E . . . . . . 112439 CTCGTTAATTCTTGGTATTCCTTTTATTGTTGTCTTATTTACTATTTATTAGCTACCTTT L V N S W Y S F Y C C L I Y Y L L A T F S L I L G I P F I V V L F T I Y - L P L P R - F L V F L L L L S Y L L F I S Y L . . : . . . . 112499 AGTTATAGTAGTTGTG : ATTCCATTACTCTCTATATATTCCGCTTCCGCAACAATTGGT S Y S S C : D S I T L Y I F R F R N N W V I V V V : I P L L S I Y S A S A T I G - L - - L - : F H Y S L Y I P L P Q Q L Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-13_AGS-1_PPS_1 (112272 112490) (frame '2'; 216 bp, 72 residues) 1 VAPNSFVTHL YLPSHLLIHL FFFPSCSILL VIFWSEINIG WLCPRSRQKK IKFYRTSLIL 61 GIPFIVVLFT IY- AGS-2 (112316 112514,116426 116465,116710 116730) SCR (e 0.907 d 0.000 a 0.000,e 0.875 d 0.000 a 0.869,e 0.619) Exon 1 112316 112514 ( 199 n); score: 0.907 Intron 1 112515 116425 (3911 n); Pd: 0.000 Pa: 0.000 Exon 2 116426 116465 ( 40 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 Pa: 0.869 Exon 3 116710 116730 ( 21 n); score: 0.619 PGS (112316 112514,116426 116465,116710 116730) SGN-U320105+ PGS (112321 112514,116426 116465,116710 116730) SGN-U337019+ 3-phase translation of AGS-2 (+strand): . . . . . . 112316 TCTCCTAATACATTTGTTCTTCTTCCCATCTTGTAGTATTTTACTTGTAATTTTTTGGAG S P N T F V L L P I L - Y F T C N F L E L L I H L F F F P S C S I L L V I F W S S - Y I C S S S H L V V F Y L - F F G . . . . . . 112376 TGAAATAAATATTGGTTGGTTGTGTCCGAGGAGTAGGCAAAAGAAAATAAAATTTTACCG - N K Y W L V V S E E - A K E N K I L P E I N I G W L C P R S R Q K K I K F Y R V K - I L V G C V R G V G K R K - N F T . . . . . . 112436 AACCTCGTTAATTCTTGGTATTCCTTTTATTGTTGTCTTATTTACTATTTATTAGCTACC N L V N S W Y S F Y C C L I Y Y L L A T T S L I L G I P F I V V L F T I Y - L P E P R - F L V F L L L L S Y L L F I S Y . . : . . . . : 112496 TTTAGTTATAGTAGTTGTG : ATTCCATTACTCTCTATATATTCCGCTTCCGCAACAATTG : G F S Y S S C : D S I T L Y I F R F R N N W : L V I V V V : I P L L S I Y S A S A T I : G L - L - - L - : F H Y S L Y I P L P Q Q L : . . 116711 ACATTTCAGACTGTGGTGAG T F Q T V V H F R L W - D I S D C G E Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (113200 113355,113494 114032) SCR (e 0.753 d 0.000 a 0.000,e 0.802) Exon 1 113200 113355 ( 156 n); score: 0.753 Intron 1 113356 113493 ( 138 n); Pd: 0.000 Pa: 0.000 Exon 2 113494 114032 ( 539 n); score: 0.802 PGS (113200 113355,113494 114032) SGN-U337768- 3-phase translation of AGS-3 (+strand): . . . . . . 113200 CACCTTCTATCATGTAATCCTCTCACTAAAAGCTATCCTAAAACTCATTTAAGTAAGACA H L L S C N P L T K S Y P K T H L S K T T F Y H V I L S L K A I L K L I - V R Q P S I M - S S H - K L S - N S F K - D . . . . . . 113260 AAGAGAGATCGCTCATACAACCTCTCTAGGCACACCTAAATGATCTTTAAGACCACCTAT K R D R S Y N L S R H T - M I F K T T Y R E I A H T T S L G T P K - S L R P P I K E R S L I Q P L - A H L N D L - D H L . . . . : . . 113320 AATGAGATCAACACACACTTACAAGACACCAAACAT : AACAACATATAGATGATATGACAT N E I N T H L Q D T K H : N N I - M I - H M R S T H T Y K T P N I : T T Y R - Y D I - - D Q H T L T R H Q T : - Q H I D D M T . . . . . . 113518 TCTCCTTCCAAAGGCTATCAAAATACTTACTTAAGTAAATCAAGAAGATAACGTTCATAT S P S K G Y Q N T Y L S K S R R - R S Y L L P K A I K I L T - V N Q E D N V H I F S F Q R L S K Y L L K - I K K I T F I . . . . . . 113578 TGACCTATTCAAGATTACCAAAATAATCTTTAAGACTACCTAAGGCTTAGATCATGTCTA - P I Q D Y Q N N L - D Y L R L R S C L D L F K I T K I I F K T T - G L D H V Y L T Y S R L P K - S L R L P K A - I M S . . . . . . 113638 CATAATCAACCATCTTCCCTAAGTAGAGTCATTCTTAGGACTTATCTAGGTAAGATACGA H N Q P S S L S R V I L R T Y L G K I R I I N H L P - V E S F L G L I - V R Y E T - S T I F P K - S H S - D L S R - D T . . . . . . 113698 AGTGACCATTCTTATGCCCCCTTCACACCTTAACTAGACAACTATTAACTACTATAGATA S D H S Y A P F T P - L D N Y - L L - I V T I L M P P S H L N - T T I N Y Y R - K - P F L C P L H T L T R Q L L T T I D . . . . . . 113758 AGTACTTATTCATTTAACATACTTTCTTAACTTAATTCATTACATTCATTTAAGACTCAT S T Y S F N I L S - L N S L H S F K T H V L I H L T Y F L N L I H Y I H L R L I K Y L F I - H T F L T - F I T F I - D S . . . . . . 113818 TCATCACATAAGGACATTCAAGTAATGGTCTTGGACAACACCTAGGGACTCTAACTAACA S S H K D I Q V M V L D N T - G L - L T H H I R T F K - W S W T T P R D S N - H F I T - G H S S N G L G Q H L G T L T N . . . . . . 113878 TCTTCAAAACTAACATCTTCAAAGTCTATTGTGCAATGTCTAGATAGTATCTCATACCAT S S K L T S S K S I V Q C L D S I S Y H L Q N - H L Q S L L C N V - I V S H T I I F K T N I F K V Y C A M S R - Y L I P . . . . . . 113938 CACCTAAACTTCATTGAACTTCTCTAATGCTAGTAGGTATCCCATATGATAAGAATAAAC H L N F I E L L - C - - V S H M I R I N T - T S L N F S N A S R Y P I - - E - T S P K L H - T S L M L V G I P Y D K N K . . . . 113998 AATAAACAACATAGAAAATGATAGATAAATTTGGA N K Q H R K - - I N L I N N I E N D R - I W Q - T T - K M I D K F G Maximal non-overlapping open reading frames (>= 64 codons): none PGL 14 (- strand): 120580 120206 AGS-1 (120580 120206) SCR (e 0.785) Exon 1 120580 120206 ( 375 n); score: 0.785 PGS (120580 120206) SGN-U328267+ 3-phase translation of AGS-1 (-strand): . . . . . . 120580 TATTATTTATTATTATGTTATAATTTATAAGTTATATTTAAGGAAAATGCACAAGTACCT Y Y L L L C Y N L - V I F K E N A Q V P I I Y Y Y V I I Y K L Y L R K M H K Y L L F I I M L - F I S Y I - G K C T S T . . . . . . 120520 GCTCAACCTATGTTTGAAATCTCAAAGACACACTTATATTATATTAAGGTCCTATTACCC A Q P M F E I S K T H L Y Y I K V L L P L N L C L K S Q R H T Y I I L R S Y Y P C S T Y V - N L K D T L I L Y - G P I T . . . . . . 120460 CCTAAACTTATTGTATAACTATTTTTCTACCACTTTTCGGCCTACATGACACTATCTTGT P K L I V - L F F Y H F S A Y M T L S C L N L L Y N Y F S T T F R P T - H Y L V P - T Y C I T I F L P L F G L H D T I L . . . . . . 120400 AGGCCCAACGTATGTTGACATTTTTCTTCAAGCTAGTGTCACGTAGGACGAAAGGGATAG R P N V C - H F S S S - C H V G R K G - G P T Y V D I F L Q A S V T - D E R D R - A Q R M L T F F F K L V S R R T K G I . . . . . . 120340 AAAATTATTTATAGAATAAGTTCAGGGGGGTAATAGGACCTGAGTATAGTATAAGTGTGT K I I Y R I S S G G - - D L S I V - V C K L F I E - V Q G G N R T - V - Y K C V E N Y L - N K F R G V I G P E Y S I S V . . . . . . 120280 CTCTGAGATTCCGGGCATAGGTTGAGGGGGTACTTTTGCATTTTCCCTTATATTTATTAC L - D S G H R L R G Y F C I F P Y I Y Y S E I P G I G - G G T F A F S L I F I T S L R F R A - V E G V L L H F P L Y L L . . 120220 TTGTAGTTTAAATGA L - F K - C S L N L V V - M Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 120206 TCATTTAAACTACAAGTAATAAATATAAGGGAAAATGCAAAAGTACCCCCTCAACCTATG S F K L Q V I N I R E N A K V P P Q P M H L N Y K - - I - G K M Q K Y P L N L C I - T T S N K Y K G K C K S T P S T Y . . . . . . 120266 CCCGGAATCTCAGAGACACACTTATACTATACTCAGGTCCTATTACCCCCCTGAACTTAT P G I S E T H L Y Y T Q V L L P P - T Y P E S Q R H T Y T I L R S Y Y P P E L I A R N L R D T L I L Y S G P I T P L N L . . . . . . 120326 TCTATAAATAATTTTCTATCCCTTTCGTCCTACGTGACACTAGCTTGAAGAAAAATGTCA S I N N F L S L S S Y V T L A - R K M S L - I I F Y P F R P T - H - L E E K C Q F Y K - F S I P F V L R D T S L K K N V . . . . . . 120386 ACATACGTTGGGCCTACAAGATAGTGTCATGTAGGCCGAAAAGTGGTAGAAAAATAGTTA T Y V G P T R - C H V G R K V V E K - L H T L G L Q D S V M - A E K W - K N S Y N I R W A Y K I V S C R P K S G R K I V . . . . . . 120446 TACAATAAGTTTAGGGGGTAATAGGACCTTAATATAATATAAGTGTGTCTTTGAGATTTC Y N K F R G - - D L N I I - V C L - D F T I S L G G N R T L I - Y K C V F E I S I Q - V - G V I G P - Y N I S V S L R F . . . . . . 120506 AAACATAGGTTGAGCAGGTACTTGTGCATTTTCCTTAAATATAACTTATAAATTATAACA K H R L S R Y L C I F L K Y N L - I I T N I G - A G T C A F S L N I T Y K L - H Q T - V E Q V L V H F P - I - L I N Y N . . 120566 TAATAATAAATAATA - - - I I N N K - I I I N N Maximal non-overlapping open reading frames (>= 64 codons): none PGL 15 (- strand): 123341 121192 AGS-1 (123341 122117,122028 121192) SCR (e 0.989 d 0.969 a 0.981,e 0.998) Exon 1 123341 122117 (1225 n); score: 0.989 Intron 1 122116 122029 ( 88 n); Pd: 0.969 Pa: 0.981 Exon 2 122028 121192 ( 837 n); score: 0.998 PGS (123341 122117,122028 121192) SGN-U314049+ PGS (122155 122117,122028 121293) SGN-U334754+ 3-phase translation of AGS-1 (-strand): . . . . . . 123341 AGGACAAAACAAAACAAAGTTAAAAAAATGGAAACACTAACAACCTCCTCTTTTTCTTAG R T K Q N K V K K M E T L T T S S F S - G Q N K T K L K K W K H - Q P P L F L R D K T K Q S - K N G N T N N L L F F L . . . . . . 123281 ACCATTTCATATCCTCACATATTTAACAGAAACCAACACTATAAATAGTTTCTCCATTTT T I S Y P H I F N R N Q H Y K - F L H F P F H I L T Y L T E T N T I N S F S I F D H F I S S H I - Q K P T L - I V S P F . . . . . . 123221 TTAGGAAATACATCTTTCAGAGCCAAGGGGCATGTACGGTCTCTAATAAAAAATCCCCAA L G N T S F R A K G H V R S L I K N P Q - E I H L S E P R G M Y G L - - K I P K F R K Y I F Q S Q G A C T V S N K K S P . . . . . . 123161 AAGCTCTCTATCGATTTAACTATACAAAAACATTTTTTTTTTTACTTTGGGAAAAATACA K L S I D L T I Q K H F F F Y F G K N T S S L S I - L Y K N I F F F T L G K I H K A L Y R F N Y T K T F F F L L W E K Y . . . . . . 123101 TAAAAGCATCAAAATATTATGGCTAAAAAATTAGTCATTGGTGGCATAGCCTCAATTCTT - K H Q N I M A K K L V I G G I A S I L K S I K I L W L K N - S L V A - P Q F L I K A S K Y Y G - K I S H W W H S L N S . . . . . . 123041 GTGGTGGCTTGTGTTGTTGCAGCATGTGTCACCATTACCAAAAAGAATGCGAGCGATGGT V V A C V V A A C V T I T K K N A S D G W W L V L L Q H V S P L P K R M R A M V C G G L C C C S M C H H Y Q K E C E R W . . . . . . 122981 GGTGATGGAGCTAGCAATGGTGGCATTTCAACCTCTACAAAATCTGTTCAAGCAATGTGT G D G A S N G G I S T S T K S V Q A M C V M E L A M V A F Q P L Q N L F K Q C V W - W S - Q W W H F N L Y K I C S S N V . . . . . . 122921 CAACCTACTGACTACAAAGAAGCTTGTGAGAAGAGTCTTGCATCAGCCAAGAACACTAGT Q P T D Y K E A C E K S L A S A K N T S N L L T T K K L V R R V L H Q P R T L V S T Y - L Q R S L - E E S C I S Q E H - . . . . . . 122861 GACCCAAAGGAACTTATAAAAGTTGCATTTGAATCAACCATAACTGACATAAAAAATGCC D P K E L I K V A F E S T I T D I K N A T Q R N L - K L H L N Q P - L T - K M P - P K G T Y K S C I - I N H N - H K K C . . . . . . 122801 ATAAAAAATACTGACTTGATCAAGGATGCAGCCAATGATCCTAGAACAAAAGAGGCTCTA I K N T D L I K D A A N D P R T K E A L - K I L T - S R M Q P M I L E Q K R L - H K K Y - L D Q G C S Q - S - N K R G S . . . . . . 122741 AATACTTGTGACGGTCTTCTTGATGTGTCTATTGATGATCTCAGAAGATCGTTCGATAAA N T C D G L L D V S I D D L R R S F D K I L V T V F L M C L L M I S E D R S I K K Y L - R S S - C V Y - - S Q K I V R - . . . . . . 122681 GTTGGCACCTTTGATATTAACAAGATCAAGGATTATACCGATGATCTAAAAACATGGATC V G T F D I N K I K D Y T D D L K T W I L A P L I L T R S R I I P M I - K H G S S W H L - Y - Q D Q G L Y R - S K N M D . . . . . . 122621 AGTGCTTCGATTACTTATCAAGAAACTTGCTTAGATGCTTTTCAAAACACAAGTGGTGAC S A S I T Y Q E T C L D A F Q N T S G D V L R L L I K K L A - M L F K T Q V V T Q C F D Y L S R N L L R C F S K H K W - . . . . . . 122561 ACTGGTGAAAAAATGAAGAAATTGTTAAAGACTGCAGGGGAGCTTACTAGCAATGGCCTT T G E K M K K L L K T A G E L T S N G L L V K K - R N C - R L Q G S L L A M A L H W - K N E E I V K D C R G A Y - Q W P . . . . . . 122501 GCTATGATTACTAGCTTTGGTGACATGCTTACTAACATGAACATTCCTGGTATTAGCCGC A M I T S F G D M L T N M N I P G I S R L - L L A L V T C L L T - T F L V L A A C Y D Y - L W - H A Y - H E H S W Y - P . . . . . . 122441 CGATTATTGGCAGATGACTACACATCATTCGTTGAAGACGGTTCTCGTAGGCTTCTTCAA R L L A D D Y T S F V E D G S R R L L Q D Y W Q M T T H H S L K T V L V G F F K P I I G R - L H I I R - R R F S - A S S . . . . . . 122381 GTTTCAAATACCAAGCCTAATGCTGTGGTTGCTCTAGATGGCAGCGGACAATTCAAGACC V S N T K P N A V V A L D G S G Q F K T F Q I P S L M L W L L - M A A D N S R P S F K Y Q A - C C G C S R W Q R T I Q D . . . . . . 122321 ATCAAAGAAGCCCTCAAAGGTGTGCCCCCAAAGAACATTCAACCCTATGTCATCTTAATC I K E A L K G V P P K N I Q P Y V I L I S K K P S K V C P Q R T F N P M S S - S H Q R S P Q R C A P K E H S T L C H L N . . . . . . 122261 AAGGCAGGTGAATATAAGGAGATGGTCGATATCCCAAGAGGGGTGACAAACGTTGTGTTT K A G E Y K E M V D I P R G V T N V V F R Q V N I R R W S I S Q E G - Q T L C L Q G R - I - G D G R Y P K R G D K R C V . . . . . . 122201 ATTGGCGAAGGCCCAACCAAGACAAAGATTACTGGCAACAAGAACTATGCTGATGGCACT I G E G P T K T K I T G N K N Y A D G T L A K A Q P R Q R L L A T R T M L M A L Y W R R P N Q D K D Y W Q Q E L C - W H . . . : . . . 122141 GCCACTTTCCATACCTCCACCGTTG : CCGTGAATGGAGATGGTTTCGTAGCAAAGGATATC A T F H T S T V : A V N G D G F V A K D I P L S I P P P L : P - M E M V S - Q R I S C H F P Y L H R C : R E W R W F R S K G Y . . . . . . 121993 GGGTTTGAAAACACAGCTGGAGCAATGAAGCACCAAGCCGTTGCACTCCGTGTATCAGCA G F E N T A G A M K H Q A V A L R V S A G L K T Q L E Q - S T K P L H S V Y Q Q R V - K H S W S N E A P S R C T P C I S . . . . . . 121933 GACAAGACAGTTTTCTACAACTGCAACATTGATGGATACCAAGACACGCTATACACACAT D K T V F Y N C N I D G Y Q D T L Y T H T R Q F S T T A T L M D T K T R Y T H I R Q D S F L Q L Q H - W I P R H A I H T . . . . . . 121873 TCCTACAGACAATTCTACAAAGATTGTTCCATCTCAGGAACCATTGACTTCATCTTTGGC S Y R Q F Y K D C S I S G T I D F I F G P T D N S T K I V P S Q E P L T S S L A F L Q T I L Q R L F H L R N H - L H L W . . . . . . 121813 GATGCATCTGCCGTGTTCCAAAACTGTAAGATGATTGTAAGGAAACCAGGTGCAAACCAA D A S A V F Q N C K M I V R K P G A N Q M H L P C S K T V R - L - G N Q V Q T K R C I C R V P K L - D D C K E T R C K P . . . . . . 121753 GCTTGTATGGTCACTGCCCAAGGAAGAAAAGACCATCGTGGGGTCGGTGCAATCATTTTG A C M V T A Q G R K D H R G V G A I I L L V W S L P K E E K T I V G S V Q S F - S L Y G H C P R K K R P S W G R C N H F . . . . . . 121693 AGGAACTGTGAAATCAGCGCTGAGCCAGCATTCATTAACACCCAGCCACCAATCAAAGCC R N C E I S A E P A F I N T Q P P I K A G T V K S A L S Q H S L T P S H Q S K P E E L - N Q R - A S I H - H P A T N Q S . . . . . . 121633 TATCTTGGACGACCATGGAAGGAGTATTCCAGGACAATTATAATGCAAAGTCAGATAGAC Y L G R P W K E Y S R T I I M Q S Q I D I L D D H G R S I P G Q L - C K V R - T L S W T T M E G V F Q D N Y N A K S D R . . . . . . 121573 GCGTTCATTGATCCTGAAGGATGGGCTCCATGGAATGGTAACTTTGCTCTAAACACTCTG A F I D P E G W A P W N G N F A L N T L R S L I L K D G L H G M V T L L - T L C R V H - S - R M G S M E W - L C S K H S . . . . . . 121513 TATTATGCAGAGTATCAGAACAGGGGACCAGGAGCAAATACTGACAGAAGGGTTAAATGG Y Y A E Y Q N R G P G A N T D R R V K W I M Q S I R T G D Q E Q I L T E G L N G V L C R V S E Q G T R S K Y - Q K G - M . . . . . . 121453 GCTGGTTATAAGAAAAGCATTTCACCACAGGAAGCTGAAAAATATGCTCCTAATATCTTC A G Y K K S I S P Q E A E K Y A P N I F L V I R K A F H H R K L K N M L L I S S G W L - E K H F T T G S - K I C S - Y L . . . . . . 121393 ATTGATCAAGATAGCTGGATTAAGAAGACTGGCATTTCCTATTGATGAATCTGTAACAAC I D Q D S W I K K T G I S Y - - I C N N L I K I A G L R R L A F P I D E S V T T H - S R - L D - E D W H F L L M N L - Q . . . . . . 121333 TTTAATTATAAATCTTATCTTCTACTGATTAAAAAATAAAAATAACTATCCAACTTATGT F N Y K S Y L L L I K K - K - L S N L C L I I N L I F Y - L K N K N N Y P T Y V L - L - I L S S T D - K I K I T I Q L M . . . . . . 121273 TTATTTAGTTGCTTTTCTAGCTATGTCATGTAATACTTAATTAGTTTTAGTTTATTCATA L F S C F S S Y V M - Y L I S F S L F I Y L V A F L A M S C N T - L V L V Y S Y F I - L L F - L C H V I L N - F - F I H . . . 121213 TTTTATGTCTTAGCTTATGCAA F Y V L A Y A F M S - L M Q I L C L S L C Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-15_AGS-1_PPS_1 (123098 122117,122028 121349) (frame '1'; 1659 bp, 553 residues) 1 KHQNIMAKKL VIGGIASILV VACVVAACVT ITKKNASDGG DGASNGGIST STKSVQAMCQ 61 PTDYKEACEK SLASAKNTSD PKELIKVAFE STITDIKNAI KNTDLIKDAA NDPRTKEALN 121 TCDGLLDVSI DDLRRSFDKV GTFDINKIKD YTDDLKTWIS ASITYQETCL DAFQNTSGDT 181 GEKMKKLLKT AGELTSNGLA MITSFGDMLT NMNIPGISRR LLADDYTSFV EDGSRRLLQV 241 SNTKPNAVVA LDGSGQFKTI KEALKGVPPK NIQPYVILIK AGEYKEMVDI PRGVTNVVFI 301 GEGPTKTKIT GNKNYADGTA TFHTSTVAVN GDGFVAKDIG FENTAGAMKH QAVALRVSAD 361 KTVFYNCNID GYQDTLYTHS YRQFYKDCSI SGTIDFIFGD ASAVFQNCKM IVRKPGANQA 421 CMVTAQGRKD HRGVGAIILR NCEISAEPAF INTQPPIKAY LGRPWKEYSR TIIMQSQIDA 481 FIDPEGWAPW NGNFALNTLY YAEYQNRGPG ANTDRRVKWA GYKKSISPQE AEKYAPNIFI 541 DQDSWIKKTG ISY- AGS-2 (123174 123017,122955 122547) SCR (e 1.000 d 0.000 a 0.000,e 1.000) Exon 1 123174 123017 ( 158 n); score: 1.000 Intron 1 123016 122956 ( 61 n); Pd: 0.000 Pa: 0.000 Exon 2 122955 122547 ( 409 n); score: 1.000 PGS (123174 123017,122955 122547) SGN-U314050+ 3-phase translation of AGS-2 (-strand): . . . . . . 123174 AAAAAATCCCCAAAAGCTCTCTATCGATTTAACTATACAAAAACATTTTTTTTTTTACTT K K S P K A L Y R F N Y T K T F F F L L K N P Q K L S I D L T I Q K H F F F Y F K I P K S S L S I - L Y K N I F F F T . . . . . . 123114 TGGGAAAAATACATAAAAGCATCAAAATATTATGGCTAAAAAATTAGTCATTGGTGGCAT W E K Y I K A S K Y Y G - K I S H W W H G K N T - K H Q N I M A K K L V I G G I L G K I H K S I K I L W L K N - S L V A . . . . : . . 123054 AGCCTCAATTCTTGTGGTGGCTTGTGTTGTTGCAGCAT : TTCAACCTCTACAAAATCTGTT S L N S C G G L C C C S I : S T S T K S V A S I L V V A C V V A A : F Q P L Q N L F - P Q F L W W L V L L Q H : F N L Y K I C . . . . . . 122933 CAAGCAATGTGTCAACCTACTGACTACAAAGAAGCTTGTGAGAAGAGTCTTGCATCAGCC Q A M C Q P T D Y K E A C E K S L A S A K Q C V N L L T T K K L V R R V L H Q P S S N V S T Y - L Q R S L - E E S C I S . . . . . . 122873 AAGAACACTAGTGACCCAAAGGAACTTATAAAAGTTGCATTTGAATCAACCATAACTGAC K N T S D P K E L I K V A F E S T I T D R T L V T Q R N L - K L H L N Q P - L T Q E H - - P K G T Y K S C I - I N H N - . . . . . . 122813 ATAAAAAATGCCATAAAAAATACTGACTTGATCAAGGATGCAGCCAATGATCCTAGAACA I K N A I K N T D L I K D A A N D P R T - K M P - K I L T - S R M Q P M I L E Q H K K C H K K Y - L D Q G C S Q - S - N . . . . . . 122753 AAAGAGGCTCTAAATACTTGTGACGGTCTTCTTGATGTGTCTATTGATGATCTCAGAAGA K E A L N T C D G L L D V S I D D L R R K R L - I L V T V F L M C L L M I S E D K R G S K Y L - R S S - C V Y - - S Q K . . . . . . 122693 TCGTTCGATAAAGTTGGCACCTTTGATATTAACAAGATCAAGGATTATACCGATGATCTA S F D K V G T F D I N K I K D Y T D D L R S I K L A P L I L T R S R I I P M I - I V R - S W H L - Y - Q D Q G L Y R - S . . . . . . 122633 AAAACATGGATCAGTGCTTCGATTACTTATCAAGAAACTTGCTTAGATGCTTTTCAAAAC K T W I S A S I T Y Q E T C L D A F Q N K H G S V L R L L I K K L A - M L F K T K N M D Q C F D Y L S R N L L R C F S K . . . 122573 ACAAGTGGTGACACTGGTGAAAAAATG T S G D T G E K M Q V V T L V K K H K W - H W - K N Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-15_AGS-2_PPS_1 (123075 123017,122955 122547) (frame '1'; 468 bp, 156 residues) 1 KISHWWHSLN SCGGLCCCSI STSTKSVQAM CQPTDYKEAC EKSLASAKNT SDPKELIKVA 61 FESTITDIKN AIKNTDLIKD AANDPRTKEA LNTCDGLLDV SIDDLRRSFD KVGTFDINKI 121 KDYTDDLKTW ISASITYQET CLDAFQNTSG DTGEKM PGL 16 (- strand): 128113 126703 AGS-1 (127307 126703) SCR (e 0.826) Exon 1 127307 126703 ( 605 n); score: 0.826 PGS (126941 126703) SGN-U337340+ PGS (126884 126703) SGN-U321279- PGS (127307 126709) SGN-U337341- PGS (126884 126710) SGN-U337339+ 3-phase translation of AGS-1 (-strand): . . . . . . 127307 AAACACATCATTCATGCAAAAATCTAGCAGCACAACATACCCATCCTACAAATTCATTAG K H I I H A K I - Q H N I P I L Q I H - N T S F M Q K S S S T T Y P S Y K F I R T H H S C K N L A A Q H T H P T N S L . . . . . . 127247 GGAGCTAAGGACAAGGACATACGAAGGGGAACAACCTTAGTTTCAAGAGTTTAAGAAACG G A K D K D I R R G T T L V S R V - E T E L R T R T Y E G E Q P - F Q E F K K R G S - G Q G H T K G N N L S F K S L R N . . . . . . 127187 TCCGAAAGAAAGTACTCTTGGAGAAAGAATTCCATGAGAGAAACTCATACCTTAATCGAT S E R K Y S W R K N S M R E T H T L I D P K E S T L G E R I P - E K L I P - S M V R K K V L L E K E F H E R N S Y L N R . . . . . . 127127 GTTCAAACTTTAATGTTGCTGCCCGGAAAACTCCTCCAAACCACTCCCAATTCACTTCAA V Q T L M L L P G K L L Q T T P N S L Q F K L - C C C P E N S S K P L P I H F K C S N F N V A A R K T P P N H S Q F T S . . . . . . 127067 AGTATACCTCTCTCGACGAACCTCTCTTAGCCTTGACGTTTTGATTACTTTTTCTTTTGC S I P L S T N L S - P - R F D Y F F F C V Y L S R R T S L S L D V L I T F S F A K Y T S L D E P L L A L T F - L L F L L . . . . . . 127007 TTAAAAAAATTTTTTGTGAGTTCTTCAAGCATGAAAATTATTGATATTTTGGCAGAAATA L K K F F V S S S S M K I I D I L A E I - K N F L - V L Q A - K L L I F W Q K - L K K I F C E F F K H E N Y - Y F G R N . . . . . . 126947 ATGTGAGGAAGATGGAGAACGTGAGAGAGGGAGTTTAGAAGCGTGAGAGAGAGAGAGGGC M - G R W R T - E R E F R S V R E R E G C E E D G E R E R G S L E A - E R E R A N V R K M E N V R E G V - K R E R E R G . . . . . . 126887 TAATTGGATTAGGAGACTAATTCAAGAATTAGTCAAATAACATTAAAATAAATAAATACA - L D - E T N S R I S Q I T L K - I N T N W I R R L I Q E L V K - H - N K - I Q L I G L G D - F K N - S N N I K I N K Y . . . . . . 126827 AATCTGTTTTATTTATTTATTTATTTATTCATTTAAAACGTGAAAGGACAATTATGCCCT N L F Y L F I Y L F I - N V K G Q L C P I C F I Y L F I Y S F K T - K D N Y A L K S V L F I Y L F I H L K R E R T I M P . . . . . . 126767 TAAATACCTATTTATTCTTATTTACATAATTCTCTTCTCTTTTTTTTCGAATCGTTACAA - I P I Y S Y L H N S L L F F F E S L Q K Y L F I L I Y I I L F S F F S N R Y N L N T Y L F L F T - F S S L F F R I V T . 126707 TAATA - N I I Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-16_AGS-1_PPS_1 (127239 127024) (frame '0'; 213 bp, 71 residues) 1 GQGHTKGNNL SFKSLRNVRK KVLLEKEFHE RNSYLNRCSN FNVAARKTPP NHSQFTSKYT 61 SLDEPLLALT F- 3-phase translation of AGS-1 (+strand): . . . . . . 126703 TATTATTGTAACGATTCGAAAAAAAAGAGAAGAGAATTATGTAAATAAGAATAAATAGGT Y Y C N D S K K K R R E L C K - E - I G I I V T I R K K R E E N Y V N K N K - V L L - R F E K K E K R I M - I R I N R . . . . . . 126763 ATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAAC I - G H N C P F T F - M N K - I N K - N F K G I I V L S R F K - I N K - I N K T Y L R A - L S F H V L N E - I N K - I K . . . . . . 126823 AGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCC R F V F I Y F N V I - L I L E L V S - S D L Y L F I L M L F D - F L N - S P N P Q I C I Y L F - C Y L T N S - I S L L I . . . . . . 126883 AATTAGCCCTCTCTCTCTCTCACGCTTCTAAACTCCCTCTCTCACGTTCTCCATCTTCCT N - P S L S L T L L N S L S H V L H L P I S P L S L S R F - T P S L T F S I F L Q L A L S L S H A S K L P L S R S P S S . . . . . . 126943 CACATTATTTCTGCCAAAATATCAATAATTTTCATGCTTGAAGAACTCACAAAAAATTTT H I I S A K I S I I F M L E E L T K N F T L F L P K Y Q - F S C L K N S Q K I F S H Y F C Q N I N N F H A - R T H K K F . . . . . . 127003 TTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGGTTCGTCGAGAGAGGT F K Q K K K - S K R Q G - E R F V E R G L S K R K S N Q N V K A K R G S S R E V F - A K E K V I K T S R L R E V R R E R . . . . . . 127063 ATACTTTGAAGTGAATTGGGAGTGGTTTGGAGGAGTTTTCCGGGCAGCAACATTAAAGTT I L - S E L G V V W R S F P G S N I K V Y F E V N W E W F G G V F R A A T L K F Y T L K - I G S G L E E F S G Q Q H - S . . . . . . 127123 TGAACATCGATTAAGGTATGAGTTTCTCTCATGGAATTCTTTCTCCAAGAGTACTTTCTT - T S I K V - V S L M E F F L Q E Y F L E H R L R Y E F L S W N S F S K S T F F L N I D - G M S F S H G I L S P R V L S . . . . . . 127183 TCGGACGTTTCTTAAACTCTTGAAACTAAGGTTGTTCCCCTTCGTATGTCCTTGTCCTTA S D V S - T L E T K V V P L R M S L S L R T F L K L L K L R L F P F V C P C P - F G R F L N S - N - G C S P S Y V L V L . . . . . . 127243 GCTCCCTAATGAATTTGTAGGATGGGTATGTTGTGCTGCTAGATTTTTGCATGAATGATG A P - - I C R M G M L C C - I F A - M M L P N E F V G W V C C A A R F L H E - C S S L M N L - D G Y V V L L D F C M N D . 127303 TGTTT C V V F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-16_AGS-1_PPS_1 (126971 127243) (frame '2'; 270 bp, 90 residues) 1 FSCLKNSQKI FLSKRKSNQN VKAKRGSSRE VYFEVNWEWF GGVFRAATLK FEHRLRYEFL 61 SWNSFSKSTF FRTFLKLLKL RLFPFVCPCP - AGS-2 (128113 128091,127231 126982) SCR (e 0.739 d 0.900 a 0.000,e 0.902) Exon 1 128113 128091 ( 23 n); score: 0.739 Intron 1 128090 127232 ( 859 n); Pd: 0.900 Pa: 0.000 Exon 2 127231 126982 ( 250 n); score: 0.902 PGS (128113 128091,127231 126982) SGN-U341110+ 3-phase translation of AGS-2 (-strand): . . . : . . . 128113 AACCCAAATTTTGAATTATTTGG : ACATACGAAGGGGAACAACCTTAGTTTCAAGAGTTTA N P N F E L F G : H T K G N N L S F K S L T Q I L N Y L : D I R R G T T L V S R V - P K F - I I W : T Y E G E Q P - F Q E F . . . . . . 127194 AGAAACGTCCGAAAGAAAGTACTCTTGGAGAAAGAATTCCATGAGAGAAACTCATACCTT R N V R K K V L L E K E F H E R N S Y L E T S E R K Y S W R K N S M R E T H T L K K R P K E S T L G E R I P - E K L I P . . . . . . 127134 AATCGATGTTCAAACTTTAATGTTGCTGCCCGGAAAACTCCTCCAAACCACTCCCAATTC N R C S N F N V A A R K T P P N H S Q F I D V Q T L M L L P G K L L Q T T P N S - S M F K L - C C C P E N S S K P L P I . . . . . . 127074 ACTTCAAAGTATACCTCTCTCGACGAACCTCTCTTAGCCTTGACGTTTTGATTACTTTTT T S K Y T S L D E P L L A L T F - L L F L Q S I P L S T N L S - P - R F D Y F F H F K V Y L S R R T S L S L D V L I T F . . . . 127014 CTTTTGCTTAAAAAAATTTTTTGTGAGTTCTTC L L L K K I F C E F F F C L K K F F V S S S F A - K N F L - V L Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-16_AGS-2_PPS_1 (128113 128091,127231 127024) (frame '1'; 228 bp, 76 residues) 1 NPNFELFGHT KGNNLSFKSL RNVRKKVLLE KEFHERNSYL NRCSNFNVAA RKTPPNHSQF 61 TSKYTSLDEP LLALTF- AGS-3 (128110 127922) SCR (e 0.833) Exon 1 128110 127922 ( 189 n); score: 0.833 PGS (128110 127922) SGN-U317281- 3-phase translation of AGS-3 (-strand): . . . . . . 128110 CCAAATTTTGAATTATTTGGATATCATTTATATTTTTCATTGATTTTTGTTCTAATATTC P N F E L F G Y H L Y F S L I F V L I F Q I L N Y L D I I Y I F H - F L F - Y S K F - I I W I S F I F F I D F C S N I . . . . . . 128050 ATAAATTTAGAACTCTAAGTTAAGTCTCAACATTTTCGTGAAATAATAAATTTTTTTTTT I N L E L - V K S Q H F R E I I N F F F - I - N S K L S L N I F V K - - I F F F H K F R T L S - V S T F S - N N K F F F . . . . . . 127990 TAATTAGAATTCTAAATTAAATTTCAATCATTTACATGAAAGAATAATTTTCTAATTTAA - L E F - I K F Q S F T - K N N F L I - N - N S K L N F N H L H E R I I F - F N L I R I L N - I S I I Y M K E - F S N L . 127930 TTAGAATTC L E F - N I R I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (+strand): . . . . . . 127922 GAATTCTAATTAAATTAGAAAATTATTCTTTCATGTAAATGATTGAAATTTAATTTAGAA E F - L N - K I I L S C K - L K F N L E N S N - I R K L F F H V N D - N L I - N I L I K L E N Y S F M - M I E I - F R . . . . . . 127982 TTCTAATTAAAAAAAAAAATTTATTATTTCACGAAAATGTTGAGACTTAACTTAGAGTTC F - L K K K I Y Y F T K M L R L N L E F S N - K K K F I I S R K C - D L T - S S I L I K K K N L L F H E N V E T - L R V . . . . . . 128042 TAAATTTATGAATATTAGAACAAAAATCAATGAAAAATATAAATGATATCCAAATAATTC - I Y E Y - N K N Q - K I - M I S K - F K F M N I R T K I N E K Y K - Y P N N S L N L - I L E Q K S M K N I N D I Q I I . 128102 AAAATTTGG K I W K F Q N L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 17 (+ strand): 128960 130003 AGS-1 (128960 129352) SCR (e 0.805) Exon 1 128960 129352 ( 393 n); score: 0.805 PGS (128960 129352) SGN-U329056+ 3-phase translation of AGS-1 (+strand): . . . . . . 128960 ATAAAGAAATAAATGATACCGAAGGTGTTAGGATAGGATAATCAAGAGGTGAGCTAGATT I K K - M I P K V L G - D N Q E V S - I - R N K - Y R R C - D R I I K R - A R F K E I N D T E G V R I G - S R G E L D . . . . . . 129020 CAGGTAATGACATTAGGTCATTCCTGATCATTGCACAGCAAACCCGATGAGAGTCTTAAA Q V M T L G H S - S L H S K P D E S L K R - - H - V I P D H C T A N P M R V L N S G N D I R S F L I I A Q Q T R - E S - . . . . . . 129080 CTACATCCTAGGTATAGCTGGTGTTCGCACTGGCCTATGAATGAATTGAAATGAAATACG L H P R Y S W C S H W P M N E L K - N T Y I L G I A G V R T G L - M N - N E I R T T S - V - L V F A L A Y E - I E M K Y . . . . . . 129140 AATGAATGAGTGAAGCAGACTCTGTGTTTGCTAAAGAAGGCTCCCTAGTTGAGGTCCCAT N E - V K Q T L C L L K K A P - L R S H M N E - S R L C V C - R R L P S - G P I E - M S E A D S V F A K E G S L V E V P . . . . . . 129200 ATGTTGAGCCCTCATTTTGGAAAGTCTTAAAGTTAAGTCTATGATAATAAGGTCTCATGG M L S P H F G K S - S - V Y D N K V S W C - A L I L E S L K V K S M I I R S H G Y V E P S F W K V L K L S L - - - G L M . . . . . . 129260 TATACGAATGAATAATATGAAAGAAAGTATGTGTTATATGTTATGTGTTATATGAATATG Y T N E - Y E R K Y V L Y V M C Y M N M I R M N N M K E S M C Y M L C V I - I C V Y E - I I - K K V C V I C Y V L Y E Y . . . . 129320 TTATGTTTTGTGTGCTATACGATAATTATAATG L C F V C Y T I I I M Y V L C A I R - L - V M F C V L Y D N Y N Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 129352 CATTATAATTATCGTATAGCACACAAAACATAACATATTCATATAACACATAACATATAA H Y N Y R I A H K T - H I H I T H N I - I I I I V - H T K H N I F I - H I T Y N L - L S Y S T Q N I T Y S Y N T - H I . . . . . . 129292 CACATACTTTCTTTCATATTATTCATTCGTATACCATGAGACCTTATTATCATAGACTTA H I L S F I L F I R I P - D L I I I D L T Y F L S Y Y S F V Y H E T L L S - T - T H T F F H I I H S Y T M R P Y Y H R L . . . . . . 129232 ACTTTAAGACTTTCCAAAATGAGGGCTCAACATATGGGACCTCAACTAGGGAGCCTTCTT T L R L S K M R A Q H M G P Q L G S L L L - D F P K - G L N I W D L N - G A F F N F K T F Q N E G S T Y G T S T R E P S . . . . . . 129172 TAGCAAACACAGAGTCTGCTTCACTCATTCATTCGTATTTCATTTCAATTCATTCATAGG - Q T Q S L L H S F I R I S F Q F I H R S K H R V C F T H S F V F H F N S F I G L A N T E S A S L I H S Y F I S I H S - . . . . . . 129112 CCAGTGCGAACACCAGCTATACCTAGGATGTAGTTTAAGACTCTCATCGGGTTTGCTGTG P V R T P A I P R M - F K T L I G F A V Q C E H Q L Y L G C S L R L S S G L L C A S A N T S Y T - D V V - D S H R V C C . . . . . . 129052 CAATGATCAGGAATGACCTAATGTCATTACCTGAATCTAGCTCACCTCTTGATTATCCTA Q - S G M T - C H Y L N L A H L L I I L N D Q E - P N V I T - I - L T S - L S Y A M I R N D L M S L P E S S S P L D Y P . . . . 128992 TCCTAACACCTTCGGTATCATTTATTTCTTTAT S - H L R Y H L F L Y P N T F G I I Y F F I L T P S V S F I S L Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (129536 130003) SCR (e 0.984) Exon 1 129536 130003 ( 468 n); score: 0.984 PGS (129536 129788) SGN-U327982+ PGS (129783 130003) SGN-U329893- PGS (129888 129993) SGN-U321279- 3-phase translation of AGS-2 (+strand): . . . . . . 129536 GTGCAGGCACAGGTGGACGCTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAG V Q A Q V D A R A T G S L L Q L S G H Q C R H R W T L E L Q V R C C S Y P D I S A G T G G R - S Y R F V V A A I R T S . . . . . . 129596 TATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTA Y S S G V W - V L M L S R M L L F Y I L I H P E F G R S S C F R G C Y C F T F - V F I R S L V G P H A F E D A T V L H S . . . . . . 129656 GCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGG A - F - S - A S G A C S T S V S F L F W R S F R V E L A E H V P L A F L S C F G S V V L E L S - R S M F H - R F F P V L . . . . . . 129716 TTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTT F K L C I G A I L A D I Q L I L N E L F S N F V L V L F W P I Y N - Y L M N Y F V Q T L Y W C Y F G R Y T I N T - - I I . . . . . . 129776 CTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTTGATGATGAACGATTACGAAATGTTA L S V A Y L L N V R W L M M N D Y E M L F Q L L I S - M L D G - - - T I T K C - S F S C L S L K C - M V D D E R L R N V . . . . . . 129836 AGAATGTTCAGCAAGTATGATTAAAGAATCAAAAACTTCAAATTTTCCGCTAAAATTAAT R M F S K Y D - R I K N F K F S A K I N E C S A S M I K E S K T S N F P L K L I K N V Q Q V - L K N Q K L Q I F R - N - . . . . . . 129896 CTATGTAAAGTAAGAATGACGTAAGCAGGCTTGTCTGCGACCTCTGAGAGGTCAACGACG L C K V R M T - A G L S A T S E R S T T Y V K - E - R K Q A C L R P L R G Q R R S M - S K N D V S R L V C D L - E V N D . . . . . 129956 CCGGTCTCGTCTGGGGTCTAGATTCCGGTCGTGACAAAGTTGGTATCA P V S S G V - I P V V T K L V S R S R L G S R F R S - Q S W Y A G L V W G L D S G R D K V G I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 130003 TGATACCAACTTTGTCACGACCGGAATCTAGACCCCAGACGAGACCGGCGTCGTTGACCT - Y Q L C H D R N L D P R R D R R R - P D T N F V T T G I - T P D E T G V V D L I P T L S R P E S R P Q T R P A S L T . . . . . . 129943 CTCAGAGGTCGCAGACAAGCCTGCTTACGTCATTCTTACTTTACATAGATTAATTTTAGC L R G R R Q A C L R H S Y F T - I N F S S E V A D K P A Y V I L T L H R L I L A S Q R S Q T S L L T S F L L Y I D - F - . . . . . . 129883 GGAAAATTTGAAGTTTTTGATTCTTTAATCATACTTGCTGAACATTCTTAACATTTCGTA G K F E V F D S L I I L A E H S - H F V E N L K F L I L - S Y L L N I L N I S - R K I - S F - F F N H T C - T F L T F R . . . . . . 129823 ATCGTTCATCATCAACCATCTAACATTTAAGAGATAAGCAACTGAAAGAAATAATTCATT I V H H Q P S N I - E I S N - K K - F I S F I I N H L T F K R - A T E R N N S L N R S S S T I - H L R D K Q L K E I I H . . . . . . 129763 AAGTATTAATTGTATATCGGCCAAAATAGCACCAATACAAAGTTTGAACCAAAACAGGAA K Y - L Y I G Q N S T N T K F E P K Q E S I N C I S A K I A P I Q S L N Q N R K - V L I V Y R P K - H Q Y K V - T K T G . . . . . . 129703 AGAAACGCTAGTGGAACATGCTCCGCTAGCTCAACTCTAAAACTACGCTAGAATGTAAAA R N A S G T C S A S S T L K L R - N V K E T L V E H A P L A Q L - N Y A R M - N K K R - W N M L R - L N S K T T L E C K . . . . . . 129643 CAGTAGCATCCTCGAAAGCATGAGGACCTACCAAACTCCGGATGAATACTGATGTCCGGA Q - H P R K H E D L P N S G - I L M S G S S I L E S M R T Y Q T P D E Y - C P D T V A S S K A - G P T K L R M N T D V R . . . . . 129583 TAGCTGCAACAACGAACCTGTAGCTCTAGCGTCCACCTGTGCCTGCAC - L Q Q R T C S S S V H L C L H S C N N E P V A L A S T C A C I A A T T N L - L - R P P V P A Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 17:59:00 2006